BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149546.4 - phase: 0
(182 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AU251550 50 2e-07
TC14294 similar to UP|Q9FYE4 (Q9FYE4) EF-hand calcium binding pr... 37 0.002
TC15328 weakly similar to UP|Q9LP71 (Q9LP71) T1N15.15, partial (... 36 0.003
TC14293 similar to UP|Q9FYE4 (Q9FYE4) EF-hand calcium binding pr... 36 0.003
BP043633 36 0.004
BP069129 35 0.008
TC7927 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like... 35 0.008
TC15235 homologue to UP|CYS1_MAIZE (Q10716) Cysteine proteinase ... 34 0.013
TC14454 similar to UP|O04133 (O04133) SRC2, partial (88%) 34 0.017
TC19379 homologue to UP|Q945P0 (Q945P0) Transcriptional activato... 33 0.038
TC11113 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich... 32 0.049
TC7897 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-li... 32 0.064
TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein... 32 0.064
TC17010 similar to UP|BAC84225 (BAC84225) RRM-containing RNA-bin... 32 0.084
AU240151 31 0.11
TC18379 similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich glycop... 31 0.11
TC16065 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich... 31 0.14
TC14213 30 0.19
TC18264 similar to UP|Q9SP93 (Q9SP93) Thiol protease, partial (4%) 30 0.19
BP070605 30 0.19
>AU251550
Length = 329
Score = 50.1 bits (118), Expect = 2e-07
Identities = 34/92 (36%), Positives = 38/92 (40%)
Frame = +2
Query: 29 GIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIP 88
G P G P PP P PG + P G P +P P P P G + P GP P P
Sbjct: 65 GPPPPGYHNPPPPGPPQPPG-YYNPPPPGPPRDPYAPAPPPPPFGHHHPPPPHGPPSPPP 241
Query: 89 PRRPYSPGGQFYRIPDGGPGEPIPLRRPYSPG 120
P Y P P G PG P P P+ PG
Sbjct: 242 PAMFYQPPP-----PPGPPGPPQP---PHPPG 313
>TC14294 similar to UP|Q9FYE4 (Q9FYE4) EF-hand calcium binding protein-like
(At5g04170), partial (65%)
Length = 1192
Score = 37.4 bits (85), Expect = 0.002
Identities = 37/108 (34%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Frame = +1
Query: 11 GGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPY--SPGGQFYGIPDGGP--GEPIPPR 66
G AP + P YG P PP +PY +P Q YG P G P PP
Sbjct: 127 GAAPPSQPYGAAPPSQSYGAP--------PPPQPYGAAPPSQPYGAPPPSQSYGGPPPPS 282
Query: 67 RPY--SPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIP 112
+PY SP GQ P P + P +S GG GG G P P
Sbjct: 283 QPYSASPYGQ-PSAPYAAPYQKPPKDESHSHGG------GGGSGYPPP 405
Score = 25.8 bits (55), Expect = 4.6
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Frame = -3
Query: 53 GIP--DGGPGEPIPPRRPY----SPGGQFYGIPDGGPGEP 86
G+P DGG G P+PP P+ S GG + G G G P
Sbjct: 425 GLPYADGGGG*PLPPPPPWEWDSSLGGFW*GAA*GADGWP 306
>TC15328 weakly similar to UP|Q9LP71 (Q9LP71) T1N15.15, partial (50%)
Length = 1325
Score = 36.2 bits (82), Expect = 0.003
Identities = 43/138 (31%), Positives = 50/138 (36%), Gaps = 31/138 (22%)
Frame = +3
Query: 31 PDGGPIEPIPPRRPYSPGGQFYGIPDG-------GPGEPIPPRRPYSPGGQFYGIPD--- 80
P G EP P PY P G F +P G GP + P S GG Y P+
Sbjct: 579 PVAGFGEPAGP--PYHPSGVFPPVPIGSGSDLVPGPPAGVFPSSGPSIGGSMYVGPNDPR 752
Query: 81 ------GGPGEP-----------IPPRRPYSPGGQFYRIPDGGPG-EPIPL-RRPYSPGG 121
GGPG P +PP + P G P G PG EP R P PG
Sbjct: 753 WFGGVGGGPGFPGGPGFPGGLPGVPPGARFDPYG-----PPGIPGFEPNRFARNPRRPGN 917
Query: 122 QF--DMPFMGRHVDDPYL 137
D+ R D Y+
Sbjct: 918 DTHPDLQHFRRDADSDYI 971
>TC14293 similar to UP|Q9FYE4 (Q9FYE4) EF-hand calcium binding protein-like
(At5g04170), partial (18%)
Length = 540
Score = 36.2 bits (82), Expect = 0.003
Identities = 30/79 (37%), Positives = 35/79 (43%), Gaps = 6/79 (7%)
Frame = +2
Query: 40 PPRRPY--SPGGQFYGIPDGGP--GEPIPPRRPY--SPGGQFYGIPDGGPGEPIPPRRPY 93
PP +PY +P Q YG P G P PP +PY SP GQ P P + P +
Sbjct: 203 PPPQPYGAAPPSQPYGAPPPSQSYGGPPPPSQPYSASPYGQ-PSAPYAAPYQKPPKDESH 379
Query: 94 SPGGQFYRIPDGGPGEPIP 112
S GG GG G P P
Sbjct: 380 SHGG------GGGSGYPPP 418
Score = 25.8 bits (55), Expect = 4.6
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Frame = -1
Query: 53 GIP--DGGPGEPIPPRRPY----SPGGQFYGIPDGGPGEP 86
G+P DGG G P+PP P+ S GG + G G G P
Sbjct: 438 GLPYADGGGG*PLPPPPPWEWDSSLGGFW*GAA*GADGWP 319
>BP043633
Length = 542
Score = 35.8 bits (81), Expect = 0.004
Identities = 33/96 (34%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
Frame = +1
Query: 14 PFAGPSRHYHDRAWYGIPDGGPIEPIPPRRP-YSPGGQFYGI-------PDGGPGEPIP- 64
P P+ H+H P P P PP+ P YSP Q++ P GP P P
Sbjct: 268 PPPDPNHHHH------FPQIPP--PHPPQAPWYSPQFQYHHPSQTPSPPPQWGPPPPPPP 423
Query: 65 -PRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQF 99
P PYS P P P PPR P+ P QF
Sbjct: 424 PPSNPYSYH------PKQFPPPPPPPRPPHPPHPQF 513
Score = 35.8 bits (81), Expect = 0.004
Identities = 34/99 (34%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Frame = +1
Query: 35 PIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRP-YSPGGQFYGI-------PDGGPGEP 86
P +P PP P + P P P PP+ P YSP Q++ P GP P
Sbjct: 241 PPQPPPPPPPPPDPNHHHHFPQIPP--PHPPQAPWYSPQFQYHHPSQTPSPPPQWGPPPP 414
Query: 87 IP--PRRPYSPGGQFYRIPDGGPGEPIPLRRPYSPGGQF 123
P P PYS Y P P P P R P+ P QF
Sbjct: 415 PPPPPSNPYS-----YH-PKQFPPPPPPPRPPHPPHPQF 513
Score = 31.6 bits (70), Expect = 0.084
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = +1
Query: 13 APFAGPSRHYHDRAWYGIPDGG----PIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRP 68
AP+ P YH + P P P PP PYS P P P PPR P
Sbjct: 331 APWYSPQFQYHHPSQTPSPPPQWGPPPPPPPPPSNPYSYH------PKQFPPPPPPPRPP 492
Query: 69 YSPGGQF 75
+ P QF
Sbjct: 493 HPPHPQF 513
>BP069129
Length = 414
Score = 35.0 bits (79), Expect = 0.008
Identities = 27/80 (33%), Positives = 28/80 (34%)
Frame = +3
Query: 31 PDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPR 90
P GP P PR P GP P P P SPGG P P P
Sbjct: 222 PPFGPAVPAGPRDP------------AGPSLPSLPGAPGSPGGP------AAPAWPGCPS 347
Query: 91 RPYSPGGQFYRIPDGGPGEP 110
P+ P G F GGP P
Sbjct: 348 LPFGPFGPF*PGTPGGPEGP 407
Score = 33.5 bits (75), Expect = 0.022
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 5/74 (6%)
Frame = +3
Query: 29 GIPDGG-----PIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGP 83
G+ GG P P P P P G G PG P P P PG GP
Sbjct: 192 GVRGGGQ*SQPPFGPAVPAGPRDPAGPSLPSLPGAPGSPGGPAAPAWPGCPSLPFGPFGP 371
Query: 84 GEPIPPRRPYSPGG 97
P P P P G
Sbjct: 372 F*PGTPGGPEGPAG 413
>TC7927 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like, partial
(56%)
Length = 1116
Score = 35.0 bits (79), Expect = 0.008
Identities = 35/104 (33%), Positives = 45/104 (42%), Gaps = 8/104 (7%)
Frame = +1
Query: 42 RRPYSPGGQFYGIPDGGPGEPIPPRRPYS------PGGQFYGIPDGGPGEPIPPRRPYSP 95
R P G+F G+P G PG +P P PGG G+P G PG +P P
Sbjct: 412 RNPGGMPGEFPGMPGGFPGGGMPGGFPGGGMPGGFPGG---GMPGGFPGGGMPGG---FP 573
Query: 96 GGQFYRIPDGGPGEPIPLRRPYS--PGGQFDMPFMGRHVDDPYL 137
GG +P G PG +P P PGG + ++DP L
Sbjct: 574 GG---GMPGGFPGGGMPGGFPGGGMPGGVPGNVDFSKILNDPDL 696
Score = 27.7 bits (60), Expect = 1.2
Identities = 21/54 (38%), Positives = 22/54 (39%), Gaps = 3/54 (5%)
Frame = -2
Query: 31 PDGGPIEPIPPRRP--YSPGGQFYGIPD-GGPGEPIPPRRPYSPGGQFYGIPDG 81
P G P PP +P P G GIP G P PP P G GIP G
Sbjct: 578 PPGNPPGMPPPGKPPGMPPPGNPPGIPPPGNPPGIPPPGNPPGIPGNSPGIPPG 417
>TC15235 homologue to UP|CYS1_MAIZE (Q10716) Cysteine proteinase 1 precursor
, partial (5%)
Length = 704
Score = 34.3 bits (77), Expect = 0.013
Identities = 30/97 (30%), Positives = 38/97 (38%), Gaps = 5/97 (5%)
Frame = +2
Query: 23 HDRAWYGIPDGGPIEPIP-----PRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYG 77
HD Y IP GP+ P P+ P++ G G G P R Y PGG
Sbjct: 194 HDGRVY-IPGVGPVGFPPKHGLIPQNPFTGGAGRAGTGAGAGSGSGRPGRSYVPGGDDTF 370
Query: 78 IPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLR 114
+P+ PG +P IP GG P P+R
Sbjct: 371 VPN--PGYEVP-------------IPGGGGSVPAPIR 436
>TC14454 similar to UP|O04133 (O04133) SRC2, partial (88%)
Length = 1190
Score = 33.9 bits (76), Expect = 0.017
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Frame = +1
Query: 39 IPPRRPYSPGGQFYGIPDGG----PGEPIPPRRP---YSPGGQFYGIPDGGPGEPIPPRR 91
+P P +PG YG P PG PP++P Y P YG P PG PP++
Sbjct: 691 VPYGTPQAPG---YGYPPPAYGAQPGHGYPPQQPGYGYPPQQAGYGYPPQQPGYGYPPQQ 861
Query: 92 P---YSPGGQFYRIPDGGPGE 109
Y P Y P G+
Sbjct: 862 AGYGYPPQQAGYGYPPQQAGQ 924
Score = 30.8 bits (68), Expect = 0.14
Identities = 20/61 (32%), Positives = 23/61 (36%), Gaps = 3/61 (4%)
Frame = +1
Query: 28 YGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRP---YSPGGQFYGIPDGGPG 84
YG G P P Y P YG P PG PP++ Y P YG P G
Sbjct: 742 YGAQPGHGYPPQQPGYGYPPQQAGYGYPPQQPGYGYPPQQAGYGYPPQQAGYGYPPQQAG 921
Query: 85 E 85
+
Sbjct: 922 Q 924
>TC19379 homologue to UP|Q945P0 (Q945P0) Transcriptional activator FHA1,
partial (56%)
Length = 525
Score = 32.7 bits (73), Expect = 0.038
Identities = 22/52 (42%), Positives = 26/52 (49%), Gaps = 1/52 (1%)
Frame = +2
Query: 60 GEPIPPRRPYSPGGQFYGIP-DGGPGEPIPPRRPYSPGGQFYRIPDGGPGEP 110
G P PPR+P S +F G P D G G +PP RP P R+P G P
Sbjct: 278 GRPSPPRKP-SCQARFPGPPPDRG*GVLLPPPRPQHPRR*RRRLPCGSASLP 430
>TC11113 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich
glycoprotein DZ-HRGP precursor, partial (10%)
Length = 309
Score = 32.3 bits (72), Expect = 0.049
Identities = 28/108 (25%), Positives = 32/108 (28%), Gaps = 2/108 (1%)
Frame = +1
Query: 14 PFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGG--PGEPIPPRRPYSP 71
P + H H W P P+ PP P +P P P PP R
Sbjct: 28 PHSHSHSHSHSHPWLPFPISAPLRSQPPSTPAVHHSPLPYLPPSPSLPNSPPPPPRS--- 198
Query: 72 GGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPYSP 119
G P EP PP + P P P P P SP
Sbjct: 199 -----GHHHPSPSEPPPPPQTTP--------PFTNPQTPTPTTSPPSP 303
>TC7897 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-like protein
2 precursor (Phytocyanin-like protein), partial (31%)
Length = 1482
Score = 32.0 bits (71), Expect = 0.064
Identities = 29/96 (30%), Positives = 31/96 (32%), Gaps = 8/96 (8%)
Frame = +3
Query: 31 PDGGPIEPIPPRRPYSPGGQFYGIPDGGP---GEPIPPRRPYS--PGGQFYGIPDGGPGE 85
P G P PP + P G P GEP P P S P +P GGP
Sbjct: 513 PRGTQPPPSPPPKSSPSPSPKASPPSGSPPTAGEPSPAGTPPSVLPSPAGAPVPAGGPSA 692
Query: 86 PIPPRRPYSPGGQFYRIPDG---GPGEPIPLRRPYS 118
PP SP P PG P P S
Sbjct: 693 GTPPSASTSPSPSPVSAPPAASPAPGAESPSSSPTS 800
Score = 32.0 bits (71), Expect = 0.064
Identities = 28/86 (32%), Positives = 29/86 (33%), Gaps = 3/86 (3%)
Frame = +3
Query: 30 IPDGGPIEPIPPRRPYSPGGQFYGIPDG---GPGEPIPPRRPYSPGGQFYGIPDGGPGEP 86
+P GGP PP SP P PG P P S P GGP
Sbjct: 669 VPAGGPSAGTPPSASTSPSPSPVSAPPAASPAPGAESPSSSPTS------NSPAGGPTAT 830
Query: 87 IPPRRPYSPGGQFYRIPDGGPGEPIP 112
P SP G P GGP P P
Sbjct: 831 SP-----SPAGD---SPAGGPPAPSP 884
>TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein 2, partial
(66%)
Length = 481
Score = 32.0 bits (71), Expect = 0.064
Identities = 30/89 (33%), Positives = 33/89 (36%), Gaps = 10/89 (11%)
Frame = -1
Query: 38 PIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPI------PPRR 91
P PPR P P + P P P PP PY P + P P P PP R
Sbjct: 472 PPPPRPPPRPPPPYPPPPP*PPLPPYPPPPPYPPPPR---PPPP*PPPPYPPPP*PPPPR 302
Query: 92 PYSPGGQFYRIP----DGGPGEPIPLRRP 116
P P R+P GP I L RP
Sbjct: 301 PPPPAPPPRRVPCTAWPLGPVTSIALARP 215
>TC17010 similar to UP|BAC84225 (BAC84225) RRM-containing RNA-binding
protein-like, partial (4%)
Length = 569
Score = 31.6 bits (70), Expect = 0.084
Identities = 18/66 (27%), Positives = 23/66 (34%)
Frame = +1
Query: 18 PSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYG 77
P YH +Y G +P+PP + Y P P P P + PG G
Sbjct: 100 PPGQYHHHQYYPPYGGYMQQPVPPYQQYPPPYHAVVAPSQPPAANHPYQHSMQPGSSQTG 279
Query: 78 IPDGGP 83
GP
Sbjct: 280 SAPAGP 297
Score = 29.6 bits (65), Expect = 0.32
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Frame = +1
Query: 40 PPRRPYSPGGQFYGIPDGGPGEPIP-PRRPYSPGG----QFYGIPDGGPGEPIPPRRPYS 94
PP P G G P+ P + P P P PG Q+Y G +P+PP + Y
Sbjct: 10 PPGGPSGSGENKPG-PEKQPMQHYPRPMMPPPPGQYHHHQYYPPYGGYMQQPVPPYQQYP 186
Query: 95 PGGQFYRIPDGGPGEPIPLRRPYSPG 120
P P P P + PG
Sbjct: 187 PPYHAVVAPSQPPAANHPYQHSMQPG 264
Score = 29.3 bits (64), Expect = 0.42
Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
Frame = +1
Query: 13 APFAGPSRHYHDRAWYGIPDGGPIEPIP-PRRPYSPGG----QFYGIPDGGPGEPIPPRR 67
+P GPS ++ P+ P++ P P P PG Q+Y G +P+PP +
Sbjct: 7 SPPGGPSGSGENKPG---PEKQPMQHYPRPMMPPPPGQYHHHQYYPPYGGYMQQPVPPYQ 177
Query: 68 PYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGP 107
Y P P P P + PG GP
Sbjct: 178 QYPPPYHAVVAPSQPPAANHPYQHSMQPGSSQTGSAPAGP 297
>AU240151
Length = 286
Score = 31.2 bits (69), Expect = 0.11
Identities = 29/78 (37%), Positives = 32/78 (40%), Gaps = 14/78 (17%)
Frame = +2
Query: 37 EPIPPRRPYS----------PGGQFYGIPDGG----PGEPIPPRRPYSPGGQFYGIPDGG 82
E I PR P S PGG G P GG PG P P PGG +G GG
Sbjct: 56 EAILPRFPCSVVLAS*LNMGPGGPGGGGPGGGWGPGPGGPGGGWGP-GPGGPGWGPGPGG 232
Query: 83 PGEPIPPRRPYSPGGQFY 100
PG + PGG F+
Sbjct: 233 PGF-------FGPGGGFF 265
>TC18379 similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich glycoprotein
DZ-HRGP precursor, partial (8%)
Length = 584
Score = 31.2 bits (69), Expect = 0.11
Identities = 30/90 (33%), Positives = 32/90 (35%)
Frame = +1
Query: 6 YAASRGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPP 65
Y G A G +Y D Y P G P P PY P QFY P P P P
Sbjct: 106 YIKFNGEAMDMGSYYNYGDYG-YAPPYGMEFSPYPSL-PY-PQHQFYPPPMAPPPPPPPA 276
Query: 66 RRPYSPGGQFYGIPDGGPGEPIPPRRPYSP 95
P +P P PP RPY P
Sbjct: 277 PAPPAPP----------PYWAAPPPRPYGP 336
>TC16065 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich
glycoprotein DZ-HRGP precursor, partial (20%)
Length = 608
Score = 30.8 bits (68), Expect = 0.14
Identities = 24/71 (33%), Positives = 27/71 (37%), Gaps = 11/71 (15%)
Frame = +1
Query: 33 GGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSP----------GGQFYGIP-DG 81
G P P PP RP P GGP P+PP P P GG + +
Sbjct: 280 GPPPPP*PPPRP----------PCGGPP*PLPPWGPGPPPPGAAAAC*GGGALLSVE*EC 429
Query: 82 GPGEPIPPRRP 92
P EP PP P
Sbjct: 430 WPSEPSPPLGP 462
Score = 28.1 bits (61), Expect = 0.93
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +1
Query: 59 PGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSP 95
PG P PP P P P GGP P+PP P P
Sbjct: 277 PGPPPPP*PPPRP-------PCGGPP*PLPPWGPGPP 366
Score = 25.4 bits (54), Expect = 6.0
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 11/49 (22%)
Frame = +1
Query: 31 PDGGPIEPIPPRRPYSP----------GGQFYGIP-DGGPGEPIPPRRP 68
P GGP P+PP P P GG + + P EP PP P
Sbjct: 316 PCGGPP*PLPPWGPGPPPPGAAAAC*GGGALLSVE*ECWPSEPSPPLGP 462
>TC14213
Length = 1284
Score = 30.4 bits (67), Expect = 0.19
Identities = 20/59 (33%), Positives = 24/59 (39%)
Frame = +1
Query: 37 EPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSP 95
+P+PP Y+P Y G+P P PY GQ YG P P P Y P
Sbjct: 784 QPVPPSVGYAPQPAPY-------GQPAPQPAPY---GQPYGYPPAPPPAQGYPATGYPP 930
Score = 25.4 bits (54), Expect = 6.0
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 61 EPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGP 107
+P+PP Y+P Y G+P P PY GQ Y P P
Sbjct: 784 QPVPPSVGYAPQPAPY-------GQPAPQPAPY---GQPYGYPPAPP 894
>TC18264 similar to UP|Q9SP93 (Q9SP93) Thiol protease, partial (4%)
Length = 570
Score = 30.4 bits (67), Expect = 0.19
Identities = 15/42 (35%), Positives = 20/42 (46%)
Frame = -1
Query: 78 IPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPYSP 119
+P P P PP P+SP Q GPG P++ P +P
Sbjct: 513 LPPPPPPPPPPPSPPHSPPSQIV----SGPGSSPPMKPPKAP 400
Score = 28.9 bits (63), Expect = 0.54
Identities = 15/42 (35%), Positives = 19/42 (44%)
Frame = -1
Query: 54 IPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSP 95
+P P P PP P+SP Q GPG P + P +P
Sbjct: 513 LPPPPPPPPPPPSPPHSPPSQIV----SGPGSSPPMKPPKAP 400
Score = 28.5 bits (62), Expect = 0.71
Identities = 15/42 (35%), Positives = 19/42 (44%)
Frame = -1
Query: 30 IPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSP 71
+P P P PP P+SP Q GPG P + P +P
Sbjct: 513 LPPPPPPPPPPPSPPHSPPSQIV----SGPGSSPPMKPPKAP 400
>BP070605
Length = 393
Score = 30.4 bits (67), Expect = 0.19
Identities = 20/59 (33%), Positives = 24/59 (39%)
Frame = -2
Query: 37 EPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSP 95
+P+PP Y+P Y G+P P PY GQ YG P P P Y P
Sbjct: 368 QPVPPSVGYAPQPAPY-------GQPAPQPAPY---GQPYGYPPAPPPAQGYPATGYPP 222
Score = 25.4 bits (54), Expect = 6.0
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -2
Query: 61 EPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGP 107
+P+PP Y+P Y G+P P PY GQ Y P P
Sbjct: 368 QPVPPSVGYAPQPAPY-------GQPAPQPAPY---GQPYGYPPAPP 258
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.323 0.153 0.530
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,274,973
Number of Sequences: 28460
Number of extensions: 86902
Number of successful extensions: 670
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of query: 182
length of database: 4,897,600
effective HSP length: 85
effective length of query: 97
effective length of database: 2,478,500
effective search space: 240414500
effective search space used: 240414500
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)
Medicago: description of AC149546.4