BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149494.6 + phase: 0 /pseudo
(556 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP043024 219 1e-57
AV407690 217 5e-57
AV428170 204 3e-53
BF177767 155 1e-38
AV422410 142 1e-34
BI420376 137 5e-33
AV416050 124 4e-29
AI967524 114 3e-26
BP051839 108 9e-26
TC12816 similar to UP|O23292 (O23292) Ankyrin homolog (Ankyrin l... 107 5e-24
TC18865 similar to UP|Q94II3 (Q94II3) ERD3 protein, partial (24%) 105 1e-23
BI419208 96 2e-20
TC19275 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial... 93 1e-19
TC16393 similar to UP|Q93YZ6 (Q93YZ6) AT4g00750/F15P23_1, partia... 82 3e-16
TC15467 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial... 80 1e-15
AV406972 79 2e-15
TC9980 similar to UP|AAR23721 (AAR23721) At1g29470, partial (15%) 66 1e-11
AV766252 49 3e-06
AV429242 46 1e-05
BP042300 45 3e-05
>BP043024
Length = 447
Score = 219 bits (557), Expect = 1e-57
Identities = 97/135 (71%), Positives = 116/135 (85%)
Frame = -1
Query: 184 FFFPGGGTMFPNGAGAYIDDIGKLINLKDGSIRTALDTGCGVASWGAYLQSRNIITLSLA 243
F FPGGGT FP GA YID + +I +K+G++RTALDTGCGVASWGAYL SRN++ +S A
Sbjct: 447 FRFPGGGTQFPQGADKYIDQLASVIPMKNGTVRTALDTGCGVASWGAYLWSRNVVAMSFA 268
Query: 244 PRDTHEAQVQFALERGVPALIGVLASKRLPFPSRAFDISHCSRCLIPWAEYDGIFLNEVD 303
PRD+HEAQVQFALERGVPA+IGVL + +LP+PS AFD++HCSRCLIPW DGI++ EVD
Sbjct: 267 PRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSAAFDMAHCSRCLIPWGANDGIYMMEVD 88
Query: 304 RVLRPGGYWILSGPP 318
RVLRPGGYW+LSGPP
Sbjct: 87 RVLRPGGYWVLSGPP 43
Score = 27.3 bits (59), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (61%), Gaps = 2/24 (8%)
Frame = -3
Query: 311 YWILS--GPPINWNKHHRGWQRTK 332
+W+L G INW +++ WQR K
Sbjct: 73 WWLLGAFGSSINWKVNYKSWQRPK 2
>AV407690
Length = 427
Score = 217 bits (552), Expect = 5e-57
Identities = 97/140 (69%), Positives = 117/140 (83%)
Frame = +3
Query: 218 ALDTGCGVASWGAYLQSRNIITLSLAPRDTHEAQVQFALERGVPALIGVLASKRLPFPSR 277
ALDTGCGVASWGAYL RN++ +S AP+D HEAQVQFALERGVPA+IGVL + LP+PSR
Sbjct: 3 ALDTGCGVASWGAYLLKRNVLAMSFAPKDNHEAQVQFALERGVPAVIGVLGTIHLPYPSR 182
Query: 278 AFDISHCSRCLIPWAEYDGIFLNEVDRVLRPGGYWILSGPPINWNKHHRGWQRTKKDLNQ 337
AFD++ CSRCLIPWA +G +L EVDRVLRPGGYWILSGPPINW +++ WQR+K+D+
Sbjct: 183 AFDMAQCSRCLIPWAANEGKYLMEVDRVLRPGGYWILSGPPINWKTYYQTWQRSKEDVKA 362
Query: 338 EQTKIEKVAKSLCWNKLIEK 357
EQ IE++A+SLCW K EK
Sbjct: 363 EQRNIEELAESLCWEKKYEK 422
>AV428170
Length = 405
Score = 204 bits (519), Expect = 3e-53
Identities = 93/140 (66%), Positives = 114/140 (81%), Gaps = 1/140 (0%)
Frame = +3
Query: 361 AIWQKPINHLDCRSARKLATDRPFCGPQENPDKAWYTDLKTCLMPVPQVSNKEETAGGVL 420
AIWQK NHLDC++ +RP C + NPDKAWYTD++TCL P+P+VS+KEETAGG L
Sbjct: 3 AIWQKAQNHLDCKA------NRPICQAENNPDKAWYTDMQTCLSPLPEVSSKEETAGGAL 164
Query: 421 KNWPQRLESVPPRIHMGTIEGVTSEGYSKDNELWKKRIPHYKKVNNQLGTK-RYRNLVDM 479
+NWP R+++ PPRI MG I+GVTSE +S+DNELWKKR+ +YKKVNNQLG RYRN +DM
Sbjct: 165 ENWPDRVKATPPRIFMGVIKGVTSETFSEDNELWKKRVSYYKKVNNQLGKPGRYRNFLDM 344
Query: 480 NANLGGFASALVKNPVWVMN 499
NANLGGFA+A +K PVWVMN
Sbjct: 345 NANLGGFAAAFIKYPVWVMN 404
>BF177767
Length = 494
Score = 155 bits (393), Expect = 1e-38
Identities = 71/112 (63%), Positives = 84/112 (74%)
Frame = +3
Query: 440 EGVTSEGYSKDNELWKKRIPHYKKVNNQLGTKRYRNLVDMNANLGGFASALVKNPVWVMN 499
EGV+SE Y DN W+K + YKK+N L T RYRN++DMNA LG FA+A+ + +WVMN
Sbjct: 12 EGVSSETYQDDNTKWRKHVNAYKKINRLLDTGRYRNIMDMNAGLGSFAAAIESSKLWVMN 191
Query: 500 VVPVQAKVDTLGAIYERGLIGTYHDWCEAMSTYPRTYDLIHADSLFSLYNGR 551
VVP A+ +TLG IYERGLIG YHDWCE STYPRTYDLIHA LFSLY +
Sbjct: 192 VVPTIAEKNTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHAHGLFSLYKSK 347
Score = 34.3 bits (77), Expect = 0.054
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +3
Query: 210 LKDGSIRTALDTGCGVASWGAYLQSRNIITLSLAPRDTHEAQVQFALERGVPALIGVLAS 269
L G R +D G+ S+ A ++S + +++ P + + ERG+ +
Sbjct: 96 LDTGRYRNIMDMNAGLGSFAAAIESSKLWVMNVVPTIAEKNTLGVIYERGLIGIYHDWCE 275
Query: 270 KRLPFPSRAFDISHCSRCLIPWAEYDGI--FLNEVDRVLRPGG 310
+P R +D+ H + I L E+DR+LRP G
Sbjct: 276 GFSTYP-RTYDLIHAHGLFSLYKSKCNIEDILLEMDRILRPEG 401
>AV422410
Length = 440
Score = 142 bits (359), Expect = 1e-34
Identities = 75/152 (49%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Frame = +2
Query: 396 YTDLKTCLMPVPQVSNKEETAGGVLKNWPQRLESVPPRIHMGTIEGVTSEGYSKDNELWK 455
Y LK C+ V K E + GV+ WP+RL + PR T+ ++ Y D W
Sbjct: 2 YFKLKKCVSRTSSV--KGEYSIGVIPKWPERLTAPQPR---STLLKNGADVYQADTRRWL 166
Query: 456 KRIPHYK-KVNNQLGTKRYRNLVDMNANLGGFASALVKNPVWVMNVVPVQAKVDTLGAIY 514
+R+ +YK +N +LGT RN++DMNA GGFA+AL+ +PVWVMNVVP + K TL I+
Sbjct: 167 RRVAYYKHSLNMKLGTSSVRNVMDMNAFFGGFAAALISDPVWVMNVVPAR-KPSTLDVIF 343
Query: 515 ERGLIGTYHDWCEAMSTYPRTYDLIHADSLFS 546
+RGLIG YHDWCE STYPRTYDLIH S+ S
Sbjct: 344 DRGLIGVYHDWCEPFSTYPRTYDLIHVSSIES 439
>BI420376
Length = 562
Score = 137 bits (345), Expect = 5e-33
Identities = 74/168 (44%), Positives = 100/168 (59%), Gaps = 12/168 (7%)
Frame = +1
Query: 16 SSMRKPH-----LYFLI--AFLCAAFYLLGAYQQRASFTSLTKKAIITSPSC-----TIQ 63
SSM KP+ LY++ LC FYL+G +Q + + + ++ +C T
Sbjct: 61 SSMAKPNKPLTRLYYITFTIILCTLFYLIGLWQHPTNTATAAVGSHFSAVNCPHLNSTST 240
Query: 64 QVNKPTLDFQSHHNSSDTIIALSSETFNFPRCGVNFTEYTPCEDPTRSLRYKRSRMIYRE 123
+ TLDF + H + D + T + P C V+ +E+TPCED RSLR+ R R+IYRE
Sbjct: 241 TTSSDTLDFSARHYNPDPPPTEAGVT-HAPPCDVSLSEHTPCEDVQRSLRFPRDRLIYRE 417
Query: 124 RHCPVKGEEDLKCRVPPPHGYKTPFTWPASRDVAWYANVPHRELTVEK 171
RHCP E+ L+CR+P P GY+ P WP SRD AWYANVPH+ELTVEK
Sbjct: 418 RHCPAP-EDALRCRIPAPFGYRVPPRWPESRDWAWYANVPHKELTVEK 558
>AV416050
Length = 355
Score = 124 bits (311), Expect = 4e-29
Identities = 55/117 (47%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
Frame = +2
Query: 368 NHLDCRSARKLATDRPFCGPQENPDKAWYTDLKTCLMPVPQVSNKEETAGGVLKNWPQRL 427
NH C+ +K+ ++P+C Q+ PD AWYT L TCL P+P+V++ +E AGG L WP+RL
Sbjct: 8 NHAHCKLKQKIFKNKPYCEAQD-PDMAWYTKLDTCLTPLPEVNDIKEVAGGELTKWPERL 184
Query: 428 ESVPPRIHMGTIEGVTSEGYSKDNELWKKRIPHYKKVNNQLGTK-RYRNLVDMNANL 483
S+PPRI +++G+ +E + +D +LWKKR+ +YK + QL + RYRNL+DMN+ L
Sbjct: 185 TSIPPRIRSESLKGINAEMFKEDTQLWKKRVAYYKTQDPQLAERGRYRNLLDMNSYL 355
>AI967524
Length = 460
Score = 114 bits (286), Expect = 3e-26
Identities = 60/142 (42%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Frame = +2
Query: 101 EYTPCEDPTRSLRYKRSRMIY--RERHCPVKGEEDLKCRVPPPHGYKTPFTWPASRDVAW 158
++ PC D +++++ Y RER CP EE C V P GYK P WP SR+ W
Sbjct: 44 DFIPCLDNLKAIKHLPITKHYEHRERQCP---EEPPTCLVSLPEGYKRPIEWPKSREKIW 214
Query: 159 YANVPHRELTVEKAVQNWIRYDGDRFFFPGGGTMFPNGAGAYIDDIGKLI-NLKDG-SIR 216
Y+NVPH +L K QNW++ G+ FPGGGT F +GA YID I + + ++ G R
Sbjct: 215 YSNVPHTKLAEFKGHQNWVKATGEYLTFPGGGTQFKHGALHYIDTIAQSVPDISWGQQTR 394
Query: 217 TALDTGCGVASWGAYLQSRNII 238
LD GCGVAS+G +L R+++
Sbjct: 395 VILDVGCGVASFGGFLFERDVL 460
>BP051839
Length = 551
Score = 108 bits (271), Expect(2) = 9e-26
Identities = 64/158 (40%), Positives = 87/158 (54%), Gaps = 6/158 (3%)
Frame = +1
Query: 396 YTDLKTCLMPVPQVSNKEETAGGVLKNWPQRLESVPPRIHMGTIEGVTS--EGYSKDNEL 453
Y LK C+ +P + G + WP RL P R+ + + S E + +++
Sbjct: 100 YVGLKACITQLPS-----DGYGVNVTTWPSRLHQPPDRLQSIKQDAIISRVELFRAESKY 264
Query: 454 WKKRIPHYKKVNNQLGTKRY--RNLVDMNANLGGFASAL--VKNPVWVMNVVPVQAKVDT 509
W + I Y + K Y RN++DM A GGFA+AL ++ WVMNVVPV +T
Sbjct: 265 WNEIIDSYVRAYRW---KEYNLRNVMDMRAGFGGFAAALHDLQIDCWVMNVVPVSG-FNT 432
Query: 510 LGAIYERGLIGTYHDWCEAMSTYPRTYDLIHADSLFSL 547
L +Y+RGLIG HDWCE TYPRTYDL+HA LFS+
Sbjct: 433 LPVLYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSV 546
Score = 25.0 bits (53), Expect(2) = 9e-26
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 361 AIWQKPINHLDCRSARKLATDRPFC 385
AIW+KP+N+ C +R + P C
Sbjct: 29 AIWRKPLNN-SCYLSRDIPVHPPLC 100
>TC12816 similar to UP|O23292 (O23292) Ankyrin homolog (Ankyrin like
protein), partial (14%)
Length = 419
Score = 107 bits (267), Expect = 5e-24
Identities = 56/142 (39%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Frame = +2
Query: 383 PFCGPQENPDKAWYTDLKTCLMPVPQVSNKEETAGGVLKNWPQRLESVPPRIHMGTIEGV 442
P C E+PD W +++ C+ P N+ + +G L WP RL S PPR+ G
Sbjct: 11 PLCQSDEDPDAVWGVNMEACITPYSDHVNRAKGSG--LAPWPARLTSPPPRL---ADFGY 175
Query: 443 TSEGYSKDNELWKKRIPHY-KKVNNQLGTKRYRNLVDMNANLGGFASALVKNPVWVMNVV 501
++E + KD ELW++R+ Y ++ ++ + RN++DM A++G FA+AL VWVMNVV
Sbjct: 176 SNEMFEKDTELWQRRVEKYWNLLSPKISSNTLRNIMDMKASMGSFAAALRDKDVWVMNVV 355
Query: 502 PVQAKVDTLGAIYERGLIGTYH 523
P Q ++TL +Y+RGLIG+ H
Sbjct: 356 P-QDGLNTLKLVYDRGLIGSTH 418
>TC18865 similar to UP|Q94II3 (Q94II3) ERD3 protein, partial (24%)
Length = 452
Score = 105 bits (263), Expect = 1e-23
Identities = 56/143 (39%), Positives = 84/143 (58%)
Frame = +2
Query: 338 EQTKIEKVAKSLCWNKLIEKDDIAIWQKPINHLDCRSARKLATDRPFCGPQENPDKAWYT 397
+ K++ + S+C+ +KDDIA+WQK ++ +C L + P C PD WYT
Sbjct: 32 DYNKLQDLLTSMCFKLYNKKDDIAVWQKAKDN-NCYDKLSLESYPPKCDDSLEPDSGWYT 208
Query: 398 DLKTCLMPVPQVSNKEETAGGVLKNWPQRLESVPPRIHMGTIEGVTSEGYSKDNELWKKR 457
L+ C + VP K+ +A ++ WP+RL S P RI ++G +S +S D+ WKKR
Sbjct: 209 PLRPCFV-VPNPKYKK-SALTYMRKWPERLHSSPERIT--GVQGSSSSTFSHDDSKWKKR 376
Query: 458 IPHYKKVNNQLGTKRYRNLVDMN 480
IPHYKK+ LGT + RN++DMN
Sbjct: 377 IPHYKKLLPDLGTSKIRNVMDMN 445
>BI419208
Length = 361
Score = 95.9 bits (237), Expect = 2e-20
Identities = 51/133 (38%), Positives = 71/133 (53%)
Frame = +3
Query: 227 SWGAYLQSRNIITLSLAPRDTHEAQVQFALERGVPALIGVLASKRLPFPSRAFDISHCSR 286
S+ A L + ++TLSL +D Q ALERG P+++ +RLPFPS FD HC
Sbjct: 3 SFVATLLDKEVLTLSLGLKDDLVDLAQVALERGFPSVVSPFGRRRLPFPSYVFDAVHCGG 182
Query: 287 CLIPWAEYDGIFLNEVDRVLRPGGYWILSGPPINWNKHHRGWQRTKKDLNQEQTKIEKVA 346
C IPW G L E++R+LRPGGY+I+S TK D +++ + +
Sbjct: 183 CSIPWHSNGGKLLLEMNRILRPGGYFIMS---------------TKHDSFEQEEAMTMLT 317
Query: 347 KSLCWNKLIEKDD 359
S+CWN L K D
Sbjct: 318 ASICWNILAHKSD 356
>TC19275 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial (18%)
Length = 664
Score = 93.2 bits (230), Expect = 1e-19
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = +1
Query: 506 KVDTLGAIYERGLIGTYHDWCEAMSTYPRTYDLIHADSLFSLYNGR 551
K TLGAIYERGLIG YHDWCEAMSTYPRTYDLIHADSLFSLYN R
Sbjct: 1 KASTLGAIYERGLIGIYHDWCEAMSTYPRTYDLIHADSLFSLYNDR 138
>TC16393 similar to UP|Q93YZ6 (Q93YZ6) AT4g00750/F15P23_1, partial (79%)
Length = 584
Score = 81.6 bits (200), Expect = 3e-16
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = +3
Query: 506 KVDTLGAIYERGLIGTYHDWCEAMSTYPRTYDLIHADSLFSLYNGR 551
+++TLG IYERGLIGTY +WCEAMSTYPRTYD IH DS+F+LY R
Sbjct: 3 EINTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFTLYQNR 140
>TC15467 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial (18%)
Length = 749
Score = 79.7 bits (195), Expect = 1e-15
Identities = 33/43 (76%), Positives = 37/43 (85%)
Frame = +3
Query: 508 DTLGAIYERGLIGTYHDWCEAMSTYPRTYDLIHADSLFSLYNG 550
+TLG ++ERGLIG YHDWCE STYPRTYDLIHA+ LFSLY G
Sbjct: 12 NTLGVVFERGLIGIYHDWCEGFSTYPRTYDLIHANDLFSLYQG 140
>AV406972
Length = 168
Score = 79.0 bits (193), Expect = 2e-15
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +2
Query: 123 ERHCPVKGEEDLKCRVPPPHGYKTPFTWPASRDVAWYANVPHRELTVEKAVQNWI 177
ERH P + +E L C +P P GY TPF WP SRD A+YANVP++ LTVEKAVQNW+
Sbjct: 5 ERHPPPE-KEKLHCLIPAPKGYTTPFPWPKSRDYAYYANVPYKHLTVEKAVQNWV 166
>TC9980 similar to UP|AAR23721 (AAR23721) At1g29470, partial (15%)
Length = 709
Score = 66.2 bits (160), Expect = 1e-11
Identities = 27/34 (79%), Positives = 30/34 (87%)
Frame = +3
Query: 513 IYERGLIGTYHDWCEAMSTYPRTYDLIHADSLFS 546
IYERGL YHDWCE+ STYPR+YDL+HADSLFS
Sbjct: 3 IYERGLFXIYHDWCESFSTYPRSYDLLHADSLFS 104
Score = 27.3 bits (59), Expect = 6.6
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +3
Query: 277 RAFDISHCSRCLIPWAEYDGIF--LNEVDRVLRPGGYWILSGPPINWNKHHRGWQRTKKD 334
R++D+ H E I + EVDR+LRP GY I+ +D
Sbjct: 66 RSYDLLHADSLFSKLKERCNIVAVIAEVDRMLRPQGYLII------------------RD 191
Query: 335 LNQEQTKIEKVAKSLCWN 352
+ +IE + KSL W+
Sbjct: 192 NVETIGEIESMTKSLHWD 245
>AV766252
Length = 585
Score = 48.5 bits (114), Expect = 3e-06
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -1
Query: 528 AMSTYPRTYDLIHADSLFSLYNGR 551
AMSTYPRTYDLIH DS+FSLYN R
Sbjct: 585 AMSTYPRTYDLIHGDSIFSLYNDR 514
>AV429242
Length = 138
Score = 46.2 bits (108), Expect = 1e-05
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = +1
Query: 193 FPNGAGAYIDDIGKLI-NLKDGS-IRTALDTGCGVASWGAYLQSRN 236
F +GA Y+D I K++ ++ G IR ALD GCGV S+GAYL SRN
Sbjct: 1 FIHGADQYLDHIAKMVPDITFGQHIRVALDVGCGVTSFGAYLLSRN 138
>BP042300
Length = 119
Score = 45.1 bits (105), Expect = 3e-05
Identities = 17/35 (48%), Positives = 26/35 (73%)
Frame = -3
Query: 285 SRCLIPWAEYDGIFLNEVDRVLRPGGYWILSGPPI 319
+RC +PW E G+ L E++R+LRPGGY++ S P+
Sbjct: 117 ARCRVPWHEDGGLLLLELNRLLRPGGYFVWSATPV 13
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.320 0.137 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,648,068
Number of Sequences: 28460
Number of extensions: 184212
Number of successful extensions: 867
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of query: 556
length of database: 4,897,600
effective HSP length: 95
effective length of query: 461
effective length of database: 2,193,900
effective search space: 1011387900
effective search space used: 1011387900
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC149494.6