BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149489.3 + phase: 0
(620 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP053476 155 2e-38
AU089102 120 5e-28
BP030332 109 1e-24
BP081623 96 1e-20
BP066774 96 2e-20
BP063629 94 5e-20
AV413186 87 8e-18
BP038410 81 6e-16
TC19836 75 4e-14
AI967878 63 3e-12
AV769479 64 7e-11
TC20002 similar to UP|Q9FJY7 (Q9FJY7) Selenium-binding protein-l... 62 2e-10
AV409405 55 3e-08
TC20231 similar to UP|Q9SKQ4 (Q9SKQ4) At2g21090 protein, partial... 46 2e-05
AV773273 35 5e-04
AV779633 39 0.002
AV767495 37 0.007
AV767789 36 0.016
AV781023 34 0.061
CB826792 32 0.23
>BP053476
Length = 514
Score = 155 bits (392), Expect = 2e-38
Identities = 70/154 (45%), Positives = 104/154 (67%)
Frame = -3
Query: 467 WEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHE 526
W V+ +R+ M+ +KK S +E+ N+VY F GD SH S +YA L+++ L+
Sbjct: 512 WTDVQTIRKSMLQDGVKKTPGYSLVELANRVYEFTLGDRSHPQSQDVYALLEKITELLKL 333
Query: 527 AGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVA 586
GY P T +V D+EE+EK + HSE++AIAF L++T+PGT + + KNLR+C DCH+A
Sbjct: 332 EGYVPRTENVLADIEEEEKEPALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMA 153
Query: 587 IKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
I+ ISK+ +REI +RD +R+H F+ G CSC D+W
Sbjct: 152 IQLISKVYDREIVIRDRSRFHPFRGGKCSCKDYW 51
>AU089102
Length = 480
Score = 120 bits (302), Expect = 5e-28
Identities = 53/144 (36%), Positives = 85/144 (58%)
Frame = +2
Query: 350 ITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIR 409
+T+V +L ACS L+DEG ++ ++++ I HY C++DL G G+L E + +I
Sbjct: 44 VTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEXHYACLVDLCGRAGRLKEXFYIIE 223
Query: 410 NMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEG 469
+ VK VWG LL C +HGN ++ +L K++++E +++G Y +L+NMYA W+
Sbjct: 224 GLGVKLSLSVWGPLLAGCNVHGNADIGKLVTTKILKVEHENAGTYSLLSNMYASXRXWKX 403
Query: 470 VEKLRQVMIDKRIKKNIACSWIEV 493
+ M DK +KK C WIEV
Sbjct: 404 XAPVXMKMNDKGLKKQPRCXWIEV 475
>BP030332
Length = 466
Score = 109 bits (273), Expect = 1e-24
Identities = 50/93 (53%), Positives = 62/93 (65%)
Frame = -1
Query: 528 GYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAI 587
GY PD VF D E DEK S + HSE++A+AFGL+S G + I KNLRIC DCH +
Sbjct: 427 GYEPDLNQVFLDFESDEKESQLVLHSEKVALAFGLLSLPQGLPIHIVKNLRICCDCHTFM 248
Query: 588 KFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
+ +SKI +R I VRD NR+H F G CSC +HW
Sbjct: 247 QLVSKIYKRRIVVRDQNRFHHFDKGCCSCRNHW 149
>BP081623
Length = 461
Score = 96.3 bits (238), Expect = 1e-20
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = -2
Query: 419 VWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMI 478
VWGALL +C+I+G+V L A E L EL+P G Y++LANMYA+ +W+ K+RQ+M
Sbjct: 460 VWGALLGACRIYGDVGLGRWAAEHLFELKPQHCGYYILLANMYAEIERWDDANKVRQLMK 281
Query: 479 DKRIKKNIACSWIEVKNKVYAFLAGD 504
+ KKN CSW++V +K++AFL G+
Sbjct: 280 SRGAKKNPGCSWVKVGDKMHAFLVGE 203
>BP066774
Length = 516
Score = 95.5 bits (236), Expect = 2e-20
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = -1
Query: 539 DVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREI 598
++ E K + C HSER AIAFGL++++PG + +TKNL +C+ CH +KFISK + REI
Sbjct: 501 NIMEASKXDIFCGHSERQAIAFGLLNSAPGMPIWVTKNLYMCQSCHNIVKFISKEVRREI 322
Query: 599 TVRDVNRYHSFKHGMCSCGD 618
+VRD R+H F+ G+CSC D
Sbjct: 321 SVRDAERFHHFRGGICSCMD 262
>BP063629
Length = 525
Score = 94.4 bits (233), Expect = 5e-20
Identities = 54/143 (37%), Positives = 86/143 (59%), Gaps = 2/143 (1%)
Frame = +1
Query: 52 SLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSN--SLLNARNLFDKIP 109
SLL+SC K++ KQ+ A + G+ ++D KL+ + S+ A +FD I
Sbjct: 106 SLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 276
Query: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169
+ +LF +NV+I+ +A G AI L+ ++ + G+ PDN+T P+VLKA L +G+GR
Sbjct: 277 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 456
Query: 170 IHEYVIKSGWERDLFVGAALIDM 192
+H +VIKSG E D +V +L+DM
Sbjct: 457 VHAFVIKSGLEFDAYVCNSLMDM 525
Score = 48.1 bits (113), Expect = 4e-06
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Frame = +1
Query: 154 VLKACSALSAIGEGRSIHEYVIKSGWE--RDLFVGAALIDMYAKCGCVMDAGRVFDKIVV 211
+LK+C ++ + + I + SG + RD I + G A R+FD I
Sbjct: 109 LLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 279
Query: 212 RDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREI 271
+N M+ A+A+ G +ISL +++ +GV P T V+ + + + GR++
Sbjct: 280 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 459
Query: 272 HGFGWRHGFQSNDKVKTALIDM 293
H F + G + + V +L+DM
Sbjct: 460 HAFVIKSGLEFDAYVCNSLMDM 525
>AV413186
Length = 398
Score = 87.0 bits (214), Expect = 8e-18
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Frame = +1
Query: 292 DMYAKCGSVKVALALFERLREKR-VVSWNAIITGYAMHGLAVGALDLF-DKMRKEDRPDH 349
DMY+KCGS++ A +F + K+ VV WN +I+ A HG A+ + D +R P+
Sbjct: 4 DMYSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPNR 183
Query: 350 ITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIR 409
TFV +L ACS L+ EG + M ++G+ P +HY C+ DLL G DE+ ++
Sbjct: 184 ATFVVLLNACSLSGLVQEGLQFFKFMTSEFGVVPDQEHYACLTDLLVRAGYFDES---VK 354
Query: 410 NMSVKPDSGVWGAL 423
+ + + W +L
Sbjct: 355 GLQIMDCTLGWNSL 396
Score = 57.0 bits (136), Expect = 9e-09
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +1
Query: 191 DMYAKCGCVMDAGRVFDKI-VVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTE 249
DMY+KCG + A RVF+ + +D VLWN+M++A A +G E++ + +M +GV P
Sbjct: 4 DMYSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPNR 183
Query: 250 ATLVTVISS 258
AT V ++++
Sbjct: 184 ATFVVLLNA 210
>BP038410
Length = 468
Score = 80.9 bits (198), Expect = 6e-16
Identities = 52/147 (35%), Positives = 78/147 (52%), Gaps = 1/147 (0%)
Frame = -2
Query: 213 DAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIH 272
D V WNS+ L +M +G+ + +T++ ++ ++ D G+ +H
Sbjct: 404 DLVSWNSVF-------------DLFTKMCWSGLIASASTVLILLPAAGDTGNFVVGKSLH 264
Query: 273 GFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAV 332
G+ + GF S+ V TALIDMYAK G V +F+ L +K VV WN +I YA +GL
Sbjct: 263 GYYIQIGFSSHLNVLTALIDMYAKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVG 84
Query: 333 GALDLFDKMRKED-RPDHITFVGVLAA 358
AL L KMR + + + TFVG+L A
Sbjct: 83 EALYLLQKMRIQGMKTNSSTFVGLLLA 3
Score = 80.1 bits (196), Expect = 1e-15
Identities = 47/133 (35%), Positives = 71/133 (53%)
Frame = -2
Query: 124 AWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDL 183
+WN D L+ KM GL T+ +L A G+S+H Y I+ G+ L
Sbjct: 395 SWNSVFD----LFTKMCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYYIQIGFSSHL 228
Query: 184 FVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAAN 243
V ALIDMYAK G V ++FD +V +D VLWN ++ YA+NG E++ L ++M
Sbjct: 227 NVLTALIDMYAKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ 48
Query: 244 GVRPTEATLVTVI 256
G++ +T V ++
Sbjct: 47 GMKTNSSTFVGLL 9
Score = 56.2 bits (134), Expect = 1e-08
Identities = 32/105 (30%), Positives = 55/105 (51%)
Frame = -2
Query: 53 LLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQN 112
LL + D+ GK LH + +G + + ++ T L+ +YA + + R +FD + ++
Sbjct: 317 LLPAAGDTGNFVVGKSLHGYYIQIGFSSHLNVLTALIDMYAKTGLVHWGRKIFDSLVDKD 138
Query: 113 LFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKA 157
+ LWN LI YA NG A+ L KM G++ ++ T +L A
Sbjct: 137 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLLA 3
>TC19836
Length = 464
Score = 74.7 bits (182), Expect = 4e-14
Identities = 33/90 (36%), Positives = 58/90 (63%)
Frame = +2
Query: 409 RNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWE 468
R M +KP + +W +L+++CK+HG +++AE+ +LI EPD++ NY +L +YA+ G W
Sbjct: 2 RTMPMKPSTRIWSSLVSACKLHGRLDIAEMLGPQLIRSEPDNAANYTLLNMIYAEHGHWL 181
Query: 469 GVEKLRQVMIDKRIKKNIACSWIEVKNKVY 498
E++ + M +R+KK S IE N+ +
Sbjct: 182 HKEQVMEAMKLQRLKKCYGFSRIETGNQCF 271
>AI967878
Length = 393
Score = 62.8 bits (151), Expect(2) = 3e-12
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 21/97 (21%)
Frame = +1
Query: 313 KRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDR---------------------PDHIT 351
+ +VSWNA+I G+ +HG L LFD+M D+ PD +T
Sbjct: 31 RNLVSWNAMILGHCIHGNPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLPPDEVT 210
Query: 352 FVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHY 388
F+G+L AC+R LL EGR+ + M +G+ P + Y
Sbjct: 211 FIGILCACARAELLAEGRSYFKQMTDVFGLKPILLIY 321
Score = 32.0 bits (71), Expect = 0.30
Identities = 22/79 (27%), Positives = 35/79 (43%), Gaps = 20/79 (25%)
Frame = +1
Query: 111 QNLFLWNVLIRGYAWNGPHDNAIILYHKML-----------------DYG---LRPDNFT 150
+NL WN +I G+ +G ++ + L+ +M+ D G L PD T
Sbjct: 31 RNLVSWNAMILGHCIHGNPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLPPDEVT 210
Query: 151 LPFVLKACSALSAIGEGRS 169
+L AC+ + EGRS
Sbjct: 211 FIGILCACARAELLAEGRS 267
Score = 30.0 bits (66), Expect = 1.1
Identities = 21/78 (26%), Positives = 34/78 (42%), Gaps = 20/78 (25%)
Frame = +1
Query: 212 RDAVLWNSMLAAYAQNGHPDESISLCREM-----------------AANGV---RPTEAT 251
R+ V WN+M+ + +G+P++ +SL EM A GV P E T
Sbjct: 31 RNLVSWNAMILGHCIHGNPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLPPDEVT 210
Query: 252 LVTVISSSADVACLPYGR 269
+ ++ + A L GR
Sbjct: 211 FIGILCACARAELLAEGR 264
Score = 25.8 bits (55), Expect(2) = 3e-12
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 387 HYTCMIDLLGHCGQLDEAYDLIRNMS 412
H CM +LL + +DEA +RNM+
Sbjct: 315 HLWCMANLLANARLVDEAEKCLRNMA 392
>AV769479
Length = 287
Score = 63.9 bits (154), Expect = 7e-11
Identities = 29/90 (32%), Positives = 51/90 (56%)
Frame = +1
Query: 155 LKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDA 214
+ CS + G+ IH +++KS W R+L A ++ YA+CG + A R FD++ RD
Sbjct: 16 MNLCSKRVDLALGKQIHAHILKSKW-RNLIADNAFVNFYAECGKISSAFRTFDRMAKRDV 192
Query: 215 VLWNSMLAAYAQNGHPDESISLCREMAANG 244
V W +++ A +Q G E++ + +M +G
Sbjct: 193 VCWTTIITACSQQGLGHEALLILSQMLGDG 282
Score = 46.2 bits (108), Expect = 2e-05
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +1
Query: 265 LPYGREIHGF----GWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNA 320
L G++IH WR+ N A ++ YA+CG + A F+R+ ++ VV W
Sbjct: 43 LALGKQIHAHILKSKWRNLIADN-----AFVNFYAECGKISSAFRTFDRMAKRDVVCWTT 207
Query: 321 IITGYAMHGLAVGALDLFDKM 341
IIT + GL AL + +M
Sbjct: 208 IITACSQQGLGHEALLILSQM 270
>TC20002 similar to UP|Q9FJY7 (Q9FJY7) Selenium-binding protein-like,
partial (4%)
Length = 560
Score = 62.4 bits (150), Expect = 2e-10
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Frame = -3
Query: 30 ATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLV 89
AT TA P T +L+ +N K++HA+ Y G N + K++
Sbjct: 414 ATSTTAVCTMSPKDATLWKAQQTLMTLFNRCSTMNHLKEIHARIYQTGFHQNHLVVGKII 235
Query: 90 HLYAVS---NSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKML--DYGL 144
AVS + A ++FD++ K + FLWN +IRG+ + A++ Y +M + +
Sbjct: 234 VFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHV 55
Query: 145 RPDNFTLPFVLKACSAL 161
PD FT F+LK L
Sbjct: 54 VPDTFTFSFLLKIVGGL 4
Score = 38.9 bits (89), Expect = 0.002
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = -3
Query: 150 TLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYA---KCGCVMDAGRVF 206
TL + CS ++ + E IH + ++G+ ++ V +I A G + A VF
Sbjct: 348 TLMTLFNRCSTMNHLKE---IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVF 178
Query: 207 DKIVVRDAVLWNSMLAAYAQNGHPDESISLCREM 240
D++ DA LWN+M+ + P++++ + M
Sbjct: 177 DRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRM 76
Score = 33.9 bits (76), Expect = 0.080
Identities = 27/110 (24%), Positives = 52/110 (46%), Gaps = 6/110 (5%)
Frame = -3
Query: 249 EATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYA---KCGSVKVALA 305
+ TL+T+ + + + L +EIH ++ GF N V +I A G + A++
Sbjct: 354 QQTLMTLFNRCSTMNHL---KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVS 184
Query: 306 LFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDR---PDHITF 352
+F+R+ + WN +I G+ A+ + +M++ + PD TF
Sbjct: 183 VFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTF 34
>AV409405
Length = 424
Score = 55.1 bits (131), Expect = 3e-08
Identities = 29/88 (32%), Positives = 50/88 (55%)
Frame = +1
Query: 52 SLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQ 111
+LL++C K+ + QLH+ LG+ ++ + TKL LY S+ +A LFD+ P +
Sbjct: 160 TLLETCHCEKSTS---QLHSLCLKLGLTHDSFIVTKLNVLYGKHASIHHAHKLFDETPDK 330
Query: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKM 139
+++LWN L+R Y G + L+ +M
Sbjct: 331 SVYLWNALLRRYRAEGEWAETLSLFRRM 414
Score = 44.3 bits (103), Expect = 6e-05
Identities = 23/73 (31%), Positives = 36/73 (48%)
Frame = +1
Query: 170 IHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGH 229
+H +K G D F+ L +Y K + A ++FD+ + LWN++L Y G
Sbjct: 202 LHSLCLKLGLTHDSFIVTKLNVLYGKHASIHHAHKLFDETPDKSVYLWNALLRRYRAEGE 381
Query: 230 PDESISLCREMAA 242
E++SL R M A
Sbjct: 382 WAETLSLFRRMHA 420
>TC20231 similar to UP|Q9SKQ4 (Q9SKQ4) At2g21090 protein, partial (5%)
Length = 550
Score = 46.2 bits (108), Expect = 2e-05
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +3
Query: 466 KWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMH 525
KW V+ R + + R++K+ A +WIE++NKV+AF D SH + IY+ L L M
Sbjct: 15 KWGLVDNARPID-EIRVRKDQALTWIEIENKVHAFTVSDGSHPLKETIYSSLGYLSSQMQ 191
Query: 526 EAGYAP 531
G AP
Sbjct: 192 --GQAP 203
>AV773273
Length = 356
Score = 35.4 bits (80), Expect(2) = 5e-04
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 556 LAIAFGLISTSPGTRLLIT-KNLRICEDCHVA-IKFISKIMEREITVRDVNRYHSF 609
LAIA+GL S LL + + R+C DCH + ++ RE+ VRD R+H F
Sbjct: 354 LAIAYGLT*YSTHAHLLESLRTFRVCGDCHNRHSRSCPGLVGRELIVRDNKRFHHF 187
Score = 25.0 bits (53), Expect(2) = 5e-04
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 604 NRYHSFKHGMCSCGDHW 620
N + + G CSCGD+W
Sbjct: 203 NAFIISQDGKCSCGDYW 153
>AV779633
Length = 440
Score = 38.9 bits (89), Expect = 0.002
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 8/135 (5%)
Frame = -2
Query: 290 LIDMYAKCGSVKVALALFERLREKRV----VSWNAIITGYAMHGLAVGALDLFDKMRKED 345
LID Y + G + ALAL E + V VS+N+++ G+ G V A LFD++
Sbjct: 397 LIDGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDLVRAESLFDEILGFQ 218
Query: 346 RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLG-HCGQLDEA 404
R + A +R L + I PT+ YT +I G HCG ++E+
Sbjct: 217 RDGESGQLKNNAVDTRDELRN--------------IRPTLATYTTLISAYGKHCG-IEES 83
Query: 405 YDLIRNM---SVKPD 416
L M + PD
Sbjct: 82 RSLYEQMVMSGIMPD 38
>AV767495
Length = 586
Score = 37.4 bits (85), Expect = 0.007
Identities = 44/179 (24%), Positives = 81/179 (44%), Gaps = 10/179 (5%)
Frame = +2
Query: 213 DAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIH 272
D V +++++ A +NG + S+ L M G+RP T ++I + ++ L G +
Sbjct: 26 DVVFYSALIDALCKNGLVESSMVLLDAMIEKGIRPNVVTYNSIIDAFGQLSALECGVDTS 205
Query: 273 GFGWRHGF--QSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGL 330
H S+ + AL ++ ++ + +FE+L ++ + G +
Sbjct: 206 VQANEHRVVPSSSMLIDGALQNLAIGKEDDRI-MKMFEQLAAEKSGQIKKDMRG-SQDKF 379
Query: 331 AVGALDLFDKMRK-EDRPDHITFVGVLAACSR-------GRLLDEGRALYNLMVRDYGI 381
+ L LF KM + E +P+ +TF +L ACS +LLDE R N + YG+
Sbjct: 380 CI--LWLFRKMHEMEIKPNVVTFSAILNACSNCKSFEDASKLLDELRLFDNQV---YGV 541
Score = 29.3 bits (64), Expect = 2.0
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAI 164
++ ++ LI NG +++++L M++ G+RP+ T ++ A LSA+
Sbjct: 26 DVVFYSALIDALCKNGLVESSMVLLDAMIEKGIRPNVVTYNSIIDAFGQLSAL 184
>AV767789
Length = 560
Score = 36.2 bits (82), Expect = 0.016
Identities = 27/107 (25%), Positives = 45/107 (41%), Gaps = 4/107 (3%)
Frame = -1
Query: 99 LNARNLFDKIPKQNL----FLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFV 154
+ AR++ + K L +N+L+ YA G H L +M L+PD+ T +
Sbjct: 551 MEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTM 372
Query: 155 LKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMD 201
+ A + H+ +IKSG D +D Y K ++D
Sbjct: 371 IYAFVRVRDFRRAFFYHKQMIKSGQVMD-------VDSYQKLRAILD 252
Score = 32.0 bits (71), Expect = 0.30
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 206 FDKIVVRDAVL-WNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVI 256
F KI + V+ +N ++ AYA+ G + L +EMAA ++P T T+I
Sbjct: 524 FGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMI 369
>AV781023
Length = 555
Score = 34.3 bits (77), Expect = 0.061
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 600 VRDVNRYHSFKHGMCSCGDHW 620
+RD R+H F+ G CSC D+W
Sbjct: 555 LRDHTRFHHFRGGQCSCSDYW 493
>CB826792
Length = 485
Score = 32.3 bits (72), Expect = 0.23
Identities = 36/152 (23%), Positives = 69/152 (44%), Gaps = 10/152 (6%)
Frame = +3
Query: 295 AKCGSVKVALALFERLREKRV----VSWNAIITGYAMHGLAVGALDLF-DKMRKEDRPDH 349
AK VK A+ L + + + V V++N++I + A ++F D M++ P
Sbjct: 6 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 185
Query: 350 ITFVGVLAACSRGRLLDEGRALYNLM--VRDYGITPTVQHYTCMIDLLGHCGQLDEAY-- 405
TF R+L ++ L+ +R+ G PT++ Y +I +LDE +
Sbjct: 186 RTFHAFF------RILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 347
Query: 406 -DLIRNMSVKPDSGVWGALLNSCKIHGNVELA 436
+++R V D + L++ ++G V+ A
Sbjct: 348 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 443
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.323 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,232,986
Number of Sequences: 28460
Number of extensions: 157773
Number of successful extensions: 776
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of query: 620
length of database: 4,897,600
effective HSP length: 96
effective length of query: 524
effective length of database: 2,165,440
effective search space: 1134690560
effective search space used: 1134690560
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC149489.3