TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149293.2 - phase: 2 
         (212 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC9163 similar to UP|Q9AT45 (Q9AT45) ADP-glucose pyrophosphoryla...    27  2.6
BU494350                                                               27  3.5
AV409550                                                               27  3.5
AW164130                                                               25  7.7
TC15847                                                                25  7.7

>TC9163 similar to UP|Q9AT45 (Q9AT45) ADP-glucose pyrophosphorylase large
           subunit  (Glucose-1-phosphate adenylyltransferase)
           (ADP-glucose synthase) , partial (5%)
          Length = 663

 Score = 26.9 bits (58), Expect = 2.6
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
 Frame = +3

Query: 108 FMTMMSKVAFYSLLIYFATSMGTHTMAAHQYGVNLSR---KLLNHLCL-NCYMELIGI 161
           F+T +S +    +LI  + + G    AAH+ G N+ R    +LN  C   C++ ++GI
Sbjct: 273 FLTAISML*PLRMLICTSVNHGQLDRAAHRMGTNIIRIQEHILNLGCFWQCFLLILGI 446


>BU494350 
          Length = 537

 Score = 26.6 bits (57), Expect = 3.5
 Identities = 19/47 (40%), Positives = 24/47 (50%), Gaps = 1/47 (2%)
 Frame = -3

Query: 6   IPAGLLYLCGWVAQSASLGMKDSWGPLKALAAASVIN-GVGDIVLCT 51
           IP G + + G+   SA L    S    +  AAASV   GVG I LC+
Sbjct: 286 IPGGRISIGGFFPASAKLVSLGSSREARKAAAASVFCVGVGSISLCS 146


>AV409550 
          Length = 413

 Score = 26.6 bits (57), Expect = 3.5
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
 Frame = -2

Query: 34  ALAAASVINGVGDIVLCT----YLGYGIAG 59
           ALAA  +++GV +++LC      LG GI G
Sbjct: 199 ALAALELLDGVAEVILCLAKAGALGVGIVG 110


>AW164130 
          Length = 393

 Score = 25.4 bits (54), Expect = 7.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 15  GWVAQSASLGMKDSWGPLKALAA 37
           GW    A+ G KD  GPLK LA+
Sbjct: 341 GWRNVKANSGRKDVEGPLKLLAS 273


>TC15847 
          Length = 542

 Score = 25.4 bits (54), Expect = 7.7
 Identities = 14/37 (37%), Positives = 22/37 (58%), Gaps = 1/37 (2%)
 Frame = +2

Query: 88  ALSIPSGREFITILGL-AAPVFMTMMSKVAFYSLLIY 123
           ++S+PS REF   LG+   P F+ ++S V   S  +Y
Sbjct: 8   SISLPSWREFCLCLGIFRVPGFLCVVSAVLEMSWRLY 118


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.338    0.146    0.479 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,921,702
Number of Sequences: 28460
Number of extensions: 55814
Number of successful extensions: 435
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of query: 212
length of database: 4,897,600
effective HSP length: 86
effective length of query: 126
effective length of database: 2,450,040
effective search space: 308705040
effective search space used: 308705040
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 53 (25.0 bits)