BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149209.4 + phase: 0 /pseudo
(205 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV766731 53 3e-08
BP041405 53 4e-08
BP035488 50 3e-07
TC19987 weakly similar to UP|Q7XJT3 (Q7XJT3) At2g17140 protein, ... 48 1e-06
BP042555 44 3e-05
AV772727 43 3e-05
AV429083 41 1e-04
AV417736 40 2e-04
BP047039 40 2e-04
CB826792 39 6e-04
AV779633 37 0.002
AV421658 35 0.012
AV771187 35 0.012
BP042107 34 0.016
BP040806 34 0.020
AV779144 33 0.035
TC13232 33 0.046
BP069917 32 0.078
TC14996 similar to UP|O23617 (O23617) Trehalose-6-phosphate synt... 32 0.078
BP048543 32 0.078
>AV766731
Length = 576
Score = 53.1 bits (126), Expect = 3e-08
Identities = 24/82 (29%), Positives = 42/82 (50%)
Frame = -3
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
PN+ Y I GLCK G L++ ++ + E +N + ++ G C+ G LDEA +
Sbjct: 343 PNIPPYPVIIDGLCKVGRLKIAQEIFQVLLSEGYNLNVMTYTVMINGYCKEGLLDEAQAL 164
Query: 91 LEEMKSIGILPDVYGYYVFVNA 112
L +M+ G +P+ + + A
Sbjct: 163 LSKMEDNGCIPNAVNFQTIICA 98
Score = 48.9 bits (115), Expect = 6e-07
Identities = 43/172 (25%), Positives = 66/172 (38%)
Frame = -3
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
PN V ++ I GLCKA + +L+ M P + N++ GLC+ LD+A +
Sbjct: 553 PNTVKKNSLINGLCKARRISCAVELVDVMHETGPPADLITTNSLFDGLCKHHLLDKAIAL 374
Query: 91 LEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVS 150
++K I P++ Y V ++ C V ++
Sbjct: 373 FMKVKDPKIQPNIPPYPVIIDGL----------------CKVGRLKI------------- 281
Query: 151 VSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
A EIF + G NV+TY+ I G CK G L L+ M
Sbjct: 280 ---------AQEIFQVLLSEGYNLNVMTYTVMINGYCKEGLLDEAQALLSKM 152
Score = 42.0 bits (97), Expect = 8e-05
Identities = 30/87 (34%), Positives = 43/87 (48%), Gaps = 1/87 (1%)
Frame = -3
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC-FNAIM 75
A EIF + G NV+TY+ I G CK G L L+ M +N I N F I+
Sbjct: 280 AQEIFQVLLSEGYNLNVMTYTVMINGYCKEGLLDEAQALLSKM-EDNGCIPNAVNFQTII 104
Query: 76 YGLCQRGELDEASQVLEEMKSIGILPD 102
L ++ E D+A ++ EM + +L D
Sbjct: 103 CALFEKNENDKAERLFREMIARDLL*D 23
>BP041405
Length = 546
Score = 52.8 bits (125), Expect = 4e-08
Identities = 26/91 (28%), Positives = 48/91 (52%)
Frame = +3
Query: 20 IFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLC 79
+F + +G TP+ + I+GLCK ++ + + N PI + + A+++G C
Sbjct: 174 VFQEMEEAGVTPDSYCNAVLIEGLCKNHRSDWGYQFLQEFRKVNAPIEVYAYTAVIHGFC 353
Query: 80 QRGELDEASQVLEEMKSIGILPDVYGYYVFV 110
+LDEA V+ +M+ G++PDV Y +
Sbjct: 354 NEMKLDEAESVVLDMERQGLVPDVNIYSALI 446
Score = 40.4 bits (93), Expect = 2e-04
Identities = 39/183 (21%), Positives = 68/183 (36%)
Frame = +3
Query: 20 IFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLC 79
I+ + R G +PN TY+ +K L + G + V++ M +++C ++ GLC
Sbjct: 78 IYEQLKRLGLSPNHYTYAIVMKALYRKGDVVHVFQ---EMEEAGVTPDSYCNAVLIEGLC 248
Query: 80 QRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGD 139
+ D Q L+E + + +VY Y ++ CN
Sbjct: 249 KNHRSDWGYQFLQEFRKVNAPIEVYAYTAVIHG----------FCN-------------- 356
Query: 140 DDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLI 199
+ A + ++ R G P+V YS I G CK+ +L L
Sbjct: 357 --------------EMKLDEAESVVLDMERQGLVPDVNIYSALICGYCKSHNLPRALDLY 494
Query: 200 CNM 202
+M
Sbjct: 495 ADM 503
Score = 29.3 bits (64), Expect = 0.50
Identities = 17/67 (25%), Positives = 31/67 (45%)
Frame = +3
Query: 33 VVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLE 92
V Y+ I G C L ++ +M R+ + + ++A++ G C+ L A +
Sbjct: 318 VYAYTAVIHGFCNEMKLDEAESVVLDMERQGLVPDVNIYSALICGYCKSHNLPRALDLYA 497
Query: 93 EMKSIGI 99
+M S GI
Sbjct: 498 DMISKGI 518
>BP035488
Length = 534
Score = 50.1 bits (118), Expect = 3e-07
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 19/154 (12%)
Frame = +3
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA------------------ 112
+N I+ G C G EA +V +++ + PD++ Y F+ A
Sbjct: 78 WNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLFRGMW 257
Query: 113 -KDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSG 171
+ + D++ CN C++DA + + A E+F ++ G
Sbjct: 258 NEGCNCKPDVVICN----CIIDA----------------LCFKKRVPEALEVFQDMKERG 377
Query: 172 ETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRE 205
PNV TY++ IK LCK + V++L+ +M R+
Sbjct: 378 CEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 479
Score = 37.0 bits (84), Expect = 0.002
Identities = 18/49 (36%), Positives = 30/49 (60%)
Frame = +3
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRE 62
+ A E+F ++ G PNV TY++ IK LCK + V++L+ +M R+
Sbjct: 333 VPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERK 479
>TC19987 weakly similar to UP|Q7XJT3 (Q7XJT3) At2g17140 protein, partial
(12%)
Length = 350
Score = 48.1 bits (113), Expect = 1e-06
Identities = 33/154 (21%), Positives = 62/154 (39%)
Frame = +3
Query: 34 VTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEE 93
VTY T+I CK G + +++ +M R +N+++ GL +G++ E +++E
Sbjct: 3 VTYDTFIWKFCKEGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDE 182
Query: 94 MKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSV 153
M+ GI PD+ Y N ++ CL + + D
Sbjct: 183 MRERGICPDICTY------------------NNVISCLCEGGKTED-------------- 266
Query: 154 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLC 187
A+ + + G +PN+ ++ IK C
Sbjct: 267 ------ATSLLHEMLDKGISPNISSFKILIKSCC 350
Score = 25.0 bits (53), Expect = 9.5
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +3
Query: 28 GETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLC 79
G P++ TY+ I LC+ G L+ M + N F ++ C
Sbjct: 195 GICPDICTYNNVISCLCEGGKTEDATSLLHEMLDKGISPNISSFKILIKSCC 350
>BP042555
Length = 510
Score = 43.5 bits (101), Expect = 3e-05
Identities = 22/79 (27%), Positives = 40/79 (49%)
Frame = +3
Query: 28 GETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEA 87
G +P+V TY+ I G C+ + ++ +M + + + ++ G CQ G+L +A
Sbjct: 273 GFSPSVATYNELIHGYCRVDRFKEAVGILRDMAKRGXSPDVDTYYPLICGFCQTGKLGKA 452
Query: 88 SQVLEEMKSIGILPDVYGY 106
++ +M GILPD Y
Sbjct: 453 FEMKAKMVHKGILPDADTY 509
Score = 30.8 bits (68), Expect = 0.17
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFV 110
+N +++G C+ EA +L +M G PDV YY +
Sbjct: 297 YNELIHGYCRVDRFKEAVGILRDMAKRGXSPDVDTYYPLI 416
>AV772727
Length = 528
Score = 43.1 bits (100), Expect = 3e-05
Identities = 32/120 (26%), Positives = 50/120 (41%)
Frame = -2
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKC 130
+++++ LC+ +D+A +LE +K GI PD+Y Y N ++
Sbjct: 518 YHSLLDALCKNHHVDKAIALLERVKDKGIQPDMYTY------------------NIIIDG 393
Query: 131 LVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAG 190
L + RV D A E+F ++ G NVVTY+ I GLC G
Sbjct: 392 LCKSGRVKD--------------------AQELFQDLLIKGYRLNVVTYNIMINGLCIEG 273
Score = 41.6 bits (96), Expect = 1e-04
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = -2
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A + + G P++ TY+ I GLCK+G ++ +L ++ + +N +N
Sbjct: 479 VDKAIALLERVKDKGIQPDMYTYNIIIDGLCKSGRVKDAQELFQDLLIKGYRLNVVTYNI 300
Query: 74 IMYGLCQRGELDEASQVL 91
++ GLC G DEA +L
Sbjct: 299 MINGLCIEGLSDEALALL 246
Score = 30.8 bits (68), Expect = 0.17
Identities = 15/37 (40%), Positives = 20/37 (53%)
Frame = -2
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAG 47
S + A E+F ++ G NVVTY+ I GLC G
Sbjct: 383 SGRVKDAQELFQDLLIKGYRLNVVTYNIMINGLCIEG 273
Score = 27.3 bits (59), Expect = 1.9
Identities = 11/37 (29%), Positives = 20/37 (53%)
Frame = -2
Query: 157 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLR 193
+ A + + G P++ TY+ I GLCK+G ++
Sbjct: 479 VDKAIALLERVKDKGIQPDMYTYNIIIDGLCKSGRVK 369
>AV429083
Length = 316
Score = 41.2 bits (95), Expect = 1e-04
Identities = 18/81 (22%), Positives = 41/81 (50%)
Frame = +3
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
P+V T++ + LCK G ++ ++ M ++ + ++ ++ G C ++ + V
Sbjct: 39 PDVSTFNILVDALCKKGKVKHAKNVLAVMIKQGVAPDLVTYSTLLDGYCLTKDMYKGKYV 218
Query: 91 LEEMKSIGILPDVYGYYVFVN 111
L M +G+ P+V Y + +N
Sbjct: 219 LNAMGRVGVTPNVDSYNIVIN 281
Score = 34.3 bits (77), Expect = 0.016
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +3
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A + + + G P++VTYST + G C + ++ M R N +N
Sbjct: 93 VKHAKNVLAVMIKQGVAPDLVTYSTLLDGYCLTKDMYKGKYVLNAMGRVGVTPNVDSYNI 272
Query: 74 IMYGLCQRGELDEA 87
++ G C+ +DEA
Sbjct: 273 VINGFCKVKLVDEA 314
Score = 34.3 bits (77), Expect = 0.016
Identities = 27/118 (22%), Positives = 43/118 (35%)
Frame = +3
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKC 130
FN ++ LC++G++ A VL M G+ PD+ Y ++ C
Sbjct: 54 FNILVDALCKKGKVKHAKNVLAVMIKQGVAPDLVTYSTLLDGY----------------C 185
Query: 131 LVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
L + D+ + + R G TPNV +Y+ I G CK
Sbjct: 186 L----------------------TKDMYKGKYVLNAMGRVGVTPNVDSYNIVINGFCK 293
Score = 26.9 bits (58), Expect = 2.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 45
D+ + + R G TPNV +Y+ I G CK
Sbjct: 195 DMYKGKYVLNAMGRVGVTPNVDSYNIVINGFCK 293
>AV417736
Length = 428
Score = 40.4 bits (93), Expect = 2e-04
Identities = 23/87 (26%), Positives = 43/87 (48%)
Frame = +1
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A + ++ + G PNVV ++T I G C AG + +L M P N + +M+
Sbjct: 112 AEALLTSMRKYGLQPNVVIFTTIISGWCTAGKMDRAVRLHEKMHEMGIPSNLKTYETLMW 291
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDV 103
G + + +A ++L M+ G+ P++
Sbjct: 292 GYGEAKQPWKAEELLVTMEERGVAPEM 372
Score = 29.6 bits (65), Expect = 0.39
Identities = 22/85 (25%), Positives = 35/85 (40%)
Frame = +1
Query: 108 VFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNI 167
+F + GIE DI + + L K V + + G A + ++
Sbjct: 16 IFNDMVKAGIEPDIHAYSILAKGYVRSGQPGK--------------------AEALLTSM 135
Query: 168 YRSGETPNVVTYSTYIKGLCKAGSL 192
+ G PNVV ++T I G C AG +
Sbjct: 136 RKYGLQPNVVIFTTIISGWCTAGKM 210
>BP047039
Length = 527
Score = 40.4 bits (93), Expect = 2e-04
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Frame = -3
Query: 23 NIYRSGETPNVVTYSTYIKGLCKAG----SLRVVWKLICNMCRENQPINNHCFNAIMYGL 78
++++ G N TY+T I GLCK G +L ++ K+ N C + PI F I+ L
Sbjct: 525 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC-IHDPIT---FETIISAL 358
Query: 79 CQRGELDEASQVLEEM 94
++GE D+A ++L EM
Sbjct: 357 FEKGENDKAEKLLREM 310
Score = 34.7 bits (78), Expect = 0.012
Identities = 14/55 (25%), Positives = 31/55 (55%)
Frame = -3
Query: 58 NMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA 112
++ ++ +NN +N ++ GLC+ G DEA ++ +M+ G + D + ++A
Sbjct: 525 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 361
Score = 27.7 bits (60), Expect = 1.5
Identities = 15/42 (35%), Positives = 24/42 (56%), Gaps = 4/42 (9%)
Frame = -3
Query: 166 NIYRSGETPNVVTYSTYIKGLCKAG----SLRVVWKLICNMC 203
++++ G N TY+T I GLCK G +L ++ K+ N C
Sbjct: 525 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 400
>CB826792
Length = 485
Score = 38.9 bits (89), Expect = 6e-04
Identities = 25/97 (25%), Positives = 49/97 (49%)
Frame = +3
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A + + ++ TP+VVTY++ IK LCK + ++ +M + N F+A
Sbjct: 21 VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA 200
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFV 110
L R E +E ++L++M+ +G P + Y + +
Sbjct: 201 FFRIL--RVE-EEVFELLDKMRELGCYPTIETYIMLI 302
Score = 32.3 bits (72), Expect = 0.059
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 43 LCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPD 102
L K ++ L+ M + N + +N+++ LC+ ++DEA +V +M I P
Sbjct: 3 LAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPT 182
Query: 103 VYGYYVFVNAKDVGIEV 119
+ ++ F V EV
Sbjct: 183 IRTFHAFFRILRVEEEV 233
Score = 28.9 bits (63), Expect = 0.66
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 157 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
+ A + + ++ TP+VVTY++ IK LCK
Sbjct: 21 VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 116
>AV779633
Length = 440
Score = 37.0 bits (84), Expect = 0.002
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 7 DVRCSADI-SPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSL 49
D C A + S A + N +++G P++V+Y++ +KG CKAG L
Sbjct: 391 DGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDL 260
Score = 36.2 bits (82), Expect = 0.004
Identities = 14/36 (38%), Positives = 25/36 (68%)
Frame = -2
Query: 157 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSL 192
+S A + N +++G P++V+Y++ +KG CKAG L
Sbjct: 367 MSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDL 260
Score = 33.9 bits (76), Expect = 0.020
Identities = 17/70 (24%), Positives = 35/70 (49%)
Frame = -2
Query: 25 YRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGEL 84
+ G +V+ +T I G C+AG + L+ N + + +N+++ G C+ G+L
Sbjct: 439 FDGGIARDVIGLNTLIDGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDL 260
Query: 85 DEASQVLEEM 94
A + +E+
Sbjct: 259 VRAESLFDEI 230
Score = 28.1 bits (61), Expect = 1.1
Identities = 10/35 (28%), Positives = 19/35 (53%)
Frame = -2
Query: 72 NAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGY 106
N ++ G C+ G + +A ++E G+ PD+ Y
Sbjct: 403 NTLIDGYCEAGLMSQALALMENSWKTGVKPDIVSY 299
>AV421658
Length = 281
Score = 34.7 bits (78), Expect = 0.012
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 30 TPNVVTYSTYIKGLC--KAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEA 87
+P+VVTY+T I C K L +++ M + + + ++ LC + L EA
Sbjct: 25 SPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQRLSEA 204
Query: 88 SQVLEEMKSIGILPDVYGYYVFVNA 112
+ EM G+ P+ Y +NA
Sbjct: 205 YDLFREMLRWGVSPNNETYTGLMNA 279
>AV771187
Length = 484
Score = 34.7 bits (78), Expect = 0.012
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = -3
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPI-NNHCFN 72
I A E+F ++ + G PN VTY + I+ + +++ +M R N I ++ +
Sbjct: 236 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYT 57
Query: 73 AIMYGLCQRGELDEA 87
I++ LC+ G + EA
Sbjct: 56 PIIHALCEAGRVAEA 12
Score = 25.4 bits (54), Expect = 7.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 160 ASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
A +F + G P+VVTY I G CK
Sbjct: 333 AGRLFRLMLFKGFVPDVVTYMPLIDGCCK 247
Score = 25.4 bits (54), Expect = 7.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCK 45
A +F + G P+VVTY I G CK
Sbjct: 333 AGRLFRLMLFKGFVPDVVTYMPLIDGCCK 247
>BP042107
Length = 515
Score = 34.3 bits (77), Expect = 0.016
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAG 47
+N YC ++ A + GNI + G PN + +T +KGLC G
Sbjct: 382 INCYCH----LGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLCLKG 510
Score = 33.1 bits (74), Expect = 0.035
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +1
Query: 116 GIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPN 175
GI DI++ + L+ C + ++ A + GNI + G PN
Sbjct: 346 GIRPDIVTSSILINCYCHLGQ--------------------LTSAFSVMGNILKRGYQPN 465
Query: 176 VVTYSTYIKGLCKAG 190
+ +T +KGLC G
Sbjct: 466 TIILNTLMKGLCLKG 510
>BP040806
Length = 534
Score = 33.9 bits (76), Expect = 0.020
Identities = 23/81 (28%), Positives = 35/81 (42%), Gaps = 1/81 (1%)
Frame = +1
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
P TY L K+G +L M E + + A++ C+ LDEA +
Sbjct: 82 PKEGTYMKLXVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 261
Query: 91 LEEMKSIGIL-PDVYGYYVFV 110
L EMK+ + PDV+ Y +
Sbjct: 262 LNEMKNHPLCQPDVFTYSTLI 324
>AV779144
Length = 544
Score = 33.1 bits (74), Expect = 0.035
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = -3
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPD 102
+NA + G+C RG+++ A++V E+M G+ PD
Sbjct: 446 YNAAVQGMCLRGKINFANKVYEKMLESGLQPD 351
>TC13232
Length = 551
Score = 32.7 bits (73), Expect = 0.046
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Frame = +1
Query: 28 GETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEA 87
G P V TY ++ C L + + M H F ++ LC +LD A
Sbjct: 10 GCEPTVSTYDIILRMFCDEERLDMAMAVWDQMRARGILPGMHVFFVLISALCHANKLDAA 189
Query: 88 SQVLEEMKSIGILPDVYGYYVFVNAK-DVGIEVDIMSCNFLLK 129
+ ++M +GI P + A D G+E + +F LK
Sbjct: 190 CKYFQQMLDVGIRPPANLFSTLKQALIDAGMET--TAIHFALK 312
>BP069917
Length = 402
Score = 32.0 bits (71), Expect = 0.078
Identities = 17/79 (21%), Positives = 34/79 (42%)
Frame = -1
Query: 35 TYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEM 94
+Y+ ++GLCK L+ ++ M N F ++ G C+ ++EA ++ +
Sbjct: 399 SYTVLVRGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTL 220
Query: 95 KSIGILPDVYGYYVFVNAK 113
G + F+N K
Sbjct: 219 IEKGFAVNEKAVKDFLNKK 163
Score = 26.9 bits (58), Expect = 2.5
Identities = 12/37 (32%), Positives = 20/37 (53%)
Frame = -1
Query: 9 RCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 45
+CS + A E + +G +PNV T+ ++G CK
Sbjct: 369 KCSR-LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 262
Score = 26.2 bits (56), Expect = 4.3
Identities = 10/32 (31%), Positives = 17/32 (52%)
Frame = -1
Query: 157 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
+ A E + +G +PNV T+ ++G CK
Sbjct: 357 LQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCK 262
>TC14996 similar to UP|O23617 (O23617) Trehalose-6-phosphate synthase
homolog (Trehalose-6-phosphate synthase like protein),
partial (10%)
Length = 729
Score = 32.0 bits (71), Expect = 0.078
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +2
Query: 93 EMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVS 152
E+K G+ + +F+ G+ D + C +GDD D+D GV ++
Sbjct: 11 EVKPQGVSKGIVPERLFLPIHQKGVIPDFVLC------------IGDDKSDEDMFGVIMN 154
Query: 153 VSADISPASEIF 164
A +SP +++F
Sbjct: 155 ARASLSPVADVF 190
>BP048543
Length = 547
Score = 32.0 bits (71), Expect = 0.078
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +2
Query: 28 GETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEA 87
G P++ T + I C G + + ++ + + + +M GLC GE+ A
Sbjct: 170 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 349
Query: 88 SQVLEEMKSIG 98
+++K+ G
Sbjct: 350 INFHDDVKAKG 382
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,120,630
Number of Sequences: 28460
Number of extensions: 58014
Number of successful extensions: 887
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of query: 205
length of database: 4,897,600
effective HSP length: 86
effective length of query: 119
effective length of database: 2,450,040
effective search space: 291554760
effective search space used: 291554760
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)
Medicago: description of AC149209.4