BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149206.9 - phase: 0
(175 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AU088998 160 9e-41
TC14917 similar to GB|AAP37839.1|30725634|BT008480 At5g64750 {Ar... 90 2e-19
TC14252 homologue to UP|Q9ZR85 (Q9ZR85) Ethylene-responsive elem... 89 5e-19
TC9504 similar to UP|Q9SXS8 (Q9SXS8) Ethylene responsive element... 82 7e-17
BP036840 81 1e-16
TC14319 similar to UP|AP23_ARATH (P42736) AP2 domain transcripti... 80 2e-16
TC14193 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive elemen... 80 3e-16
TC7954 similar to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein... 79 4e-16
TC14961 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding pro... 79 6e-16
TC15600 homologue to UP|BAD01556 (BAD01556) ERF-like protein, pa... 78 7e-16
TC15981 similar to UP|ERF3_ARATH (O80339) Ethylene responsive el... 78 1e-15
TC16026 similar to UP|Q9SGZ3 (Q9SGZ3) F28K19.29, partial (32%) 77 2e-15
TC8599 homologue to UP|Q40478 (Q40478) EREBP-4, partial (26%) 77 2e-15
TC15842 homologue to GB|BAB62912.1|15207792|AB055883 ERF domain ... 76 3e-15
TC10014 similar to UP|Q8LLR3 (Q8LLR3) Ethylene-responsive elemen... 75 8e-15
TC13814 similar to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protei... 74 1e-14
TC9975 similar to UP|AAR15448 (AAR15448) AP2 transcription facto... 73 3e-14
TC13128 similar to AAS46630 (AAS46630) At5g21960, partial (40%) 73 3e-14
TC19692 similar to UP|Q9LYD3 (Q9LYD3) Transcription factor like ... 73 3e-14
TC8031 similar to UP|Q9FR33 (Q9FR33) Ripening regulated protein ... 72 4e-14
>AU088998
Length = 564
Score = 160 bits (406), Expect = 9e-41
Identities = 91/142 (64%), Positives = 102/142 (71%), Gaps = 15/142 (10%)
Frame = +1
Query: 48 EAAILMSGRNAKTNFPINVENQTNSISSSSTSSKAFSAVLSAKLRKCCKFPSPSLTCLRL 107
EAAILMSGRNAKTNFP+ + NS S+S +++ FS VLSAKLRKC K PSPSLTCLRL
Sbjct: 7 EAAILMSGRNAKTNFPVVDDQMGNSTSASFSTT--FSTVLSAKLRKCFKSPSPSLTCLRL 180
Query: 108 DAENSHIGVWQKGAGPRSESNWIMMVELERK--------KSASVPEKAKPEELSK----- 154
DAENSH GVWQK AGPRSESNWIMMVELERK + +PEK K E++ K
Sbjct: 181 DAENSHFGVWQKQAGPRSESNWIMMVELERKNKNDHRASSDSELPEKNKQEKVIKPEEST 360
Query: 155 --NGLDDEQKIALQMIEELLNR 174
NG+D E IAL MI ELLNR
Sbjct: 361 NNNGMDXEXXIALXMIXELLNR 426
>TC14917 similar to GB|AAP37839.1|30725634|BT008480 At5g64750 {Arabidopsis
thaliana;}, partial (17%)
Length = 1051
Score = 90.1 bits (222), Expect = 2e-19
Identities = 45/84 (53%), Positives = 55/84 (64%), Gaps = 7/84 (8%)
Frame = +3
Query: 5 KKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFPI 64
+K+RGVRQR WG W +EIR P RVWLGTF TAEEAA+AYD+A++ G AK NFP
Sbjct: 204 RKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFNTAEEAARAYDQASLRFRGNKAKLNFPE 383
Query: 65 NVE-------NQTNSISSSSTSSK 81
NV NQ + S+S SS+
Sbjct: 384 NVRLLQQPSINQPTTHFSNSNSSE 455
>TC14252 homologue to UP|Q9ZR85 (Q9ZR85) Ethylene-responsive element binding
protein homolog, partial (47%)
Length = 1174
Score = 88.6 bits (218), Expect = 5e-19
Identities = 53/103 (51%), Positives = 63/103 (60%), Gaps = 11/103 (10%)
Frame = +1
Query: 7 FRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFPI-- 64
FRGVR+R WG + +EIR P K RVWLGTF+TAEEAA+AYD AA G AKTNFP
Sbjct: 199 FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREFRGPKAKTNFPFPS 378
Query: 65 -NVENQTNSISSSSTSSK--------AFSAVLSAKLRKCCKFP 98
NV+NQ+ S SS+ SS A S+ L L +FP
Sbjct: 379 DNVKNQSPSQSSTVESSSRDRDVAAAADSSSLDLNLAPSVRFP 507
>TC9504 similar to UP|Q9SXS8 (Q9SXS8) Ethylene responsive element binding
factor, partial (35%)
Length = 633
Score = 81.6 bits (200), Expect = 7e-17
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +2
Query: 6 KFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFPIN 65
++RGVR+R WG + +EIR P+ K RVWLGTF++AEEAA+AYD AA + G AKTNFP++
Sbjct: 431 RYRGVRKRPWGRFAAEIRDPMKKARVWLGTFDSAEEAARAYDAAARALRGPKAKTNFPLS 610
>BP036840
Length = 584
Score = 80.9 bits (198), Expect = 1e-16
Identities = 39/87 (44%), Positives = 54/87 (61%)
Frame = +3
Query: 7 FRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFPINV 66
+RGVR+R WG WVSEIR P K R+WLG+F E AAKAYD AA + GR A+ NFP V
Sbjct: 87 YRGVRKRRWGRWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDEV 266
Query: 67 ENQTNSISSSSTSSKAFSAVLSAKLRK 93
+ + ++ +A +A ++ + K
Sbjct: 267 DRLPVPATCTARDIQAAAAKAASMMSK 347
>TC14319 similar to UP|AP23_ARATH (P42736) AP2 domain transcription factor
RAP2.3 (Related to AP2 protein 3) (Cadmium-induced
protein AS30), partial (37%)
Length = 1130
Score = 80.1 bits (196), Expect = 2e-16
Identities = 38/60 (63%), Positives = 43/60 (71%)
Frame = +3
Query: 7 FRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFPINV 66
+RG+RQR WG W +EIR P RVWLGTF TAEEAA+AYDEAA + G AK NFP V
Sbjct: 402 YRGIRQRPWGKWAAEIRDPQKGVRVWLGTFPTAEEAARAYDEAAKRIRGDKAKLNFPDTV 581
>TC14193 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive element binding
factor 4-like protein, partial (50%)
Length = 1128
Score = 79.7 bits (195), Expect = 3e-16
Identities = 39/66 (59%), Positives = 46/66 (69%)
Frame = +3
Query: 7 FRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFPINV 66
FRGVR+R WG + +EIR P K RVWLGTF+TAEEAA+AYD AA G AKTNFP +
Sbjct: 177 FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAARQFRGPKAKTNFPQSP 356
Query: 67 ENQTNS 72
N+
Sbjct: 357 SPDNNT 374
>TC7954 similar to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein, partial
(75%)
Length = 1708
Score = 79.0 bits (193), Expect = 4e-16
Identities = 35/71 (49%), Positives = 47/71 (65%)
Frame = +2
Query: 6 KFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFPIN 65
++RG+RQR WG W +EIR P RVWLGTF TAEEAA+AYD A + G AK NFP+
Sbjct: 521 QYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGNKAKVNFPVE 700
Query: 66 VENQTNSISSS 76
+ + + ++
Sbjct: 701 PQLSSKRLKAN 733
>TC14961 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding protein,
partial (27%)
Length = 1135
Score = 78.6 bits (192), Expect = 6e-16
Identities = 42/88 (47%), Positives = 56/88 (62%), Gaps = 6/88 (6%)
Frame = +1
Query: 7 FRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFP--- 63
+RGVRQR WG WV+EIR P +R+WLGTF TA AA AYDEAA M G +A+ NFP
Sbjct: 388 YRGVRQRTWGKWVAEIREPNRGKRLWLGTFATAIGAALAYDEAARAMYGSSARLNFPNVA 567
Query: 64 ---INVENQTNSISSSSTSSKAFSAVLS 88
+ E+ +S ++ S + +AVL+
Sbjct: 568 VSHFSEESLKDSSVANDDSGSSMAAVLA 651
>TC15600 homologue to UP|BAD01556 (BAD01556) ERF-like protein, partial (36%)
Length = 570
Score = 78.2 bits (191), Expect = 7e-16
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +3
Query: 7 FRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFP 63
+RG+RQR WG W +EIR P RVWLGTF TAEEAA+AYD A + G+ AK NFP
Sbjct: 396 YRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFP 566
>TC15981 similar to UP|ERF3_ARATH (O80339) Ethylene responsive element
binding factor 3 (AtERF3), partial (45%)
Length = 671
Score = 77.8 bits (190), Expect = 1e-15
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = +1
Query: 6 KFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFP 63
+FRGVR+R WG + +EIR P K RVWLGTF++AE+AA+AYD AA G AKTNFP
Sbjct: 238 RFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEDAARAYDAAARSFRGPKAKTNFP 411
>TC16026 similar to UP|Q9SGZ3 (Q9SGZ3) F28K19.29, partial (32%)
Length = 1183
Score = 76.6 bits (187), Expect = 2e-15
Identities = 34/52 (65%), Positives = 42/52 (80%)
Frame = +2
Query: 4 SKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSG 55
+K +RGVRQRHWG WV+EIR P + R+WLGTF+TAEEAA AYD+AA + G
Sbjct: 1022 TKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRG 1177
>TC8599 homologue to UP|Q40478 (Q40478) EREBP-4, partial (26%)
Length = 632
Score = 76.6 bits (187), Expect = 2e-15
Identities = 39/67 (58%), Positives = 47/67 (69%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 HSKKFRGVRQRHWGSWVSEIRHPLLK-RRVWLGTFETAEEAAKAYDEAAILMSGRNAKTN 61
++K +RGVR+R WG + +EIR P K RVWLGTF+TA EAAKAYD AA M G A N
Sbjct: 378 NNKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDRAAFKMRGSRAILN 557
Query: 62 FPINVEN 68
FP+ V N
Sbjct: 558 FPLEVGN 578
>TC15842 homologue to GB|BAB62912.1|15207792|AB055883 ERF domain protein12
{Arabidopsis thaliana;} , partial (41%)
Length = 746
Score = 76.3 bits (186), Expect = 3e-15
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +2
Query: 7 FRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFP 63
+RGVR+R WG + +EIR P K RVWLGTF+T EEAA AYD AA + G AKTNFP
Sbjct: 185 YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNFP 355
>TC10014 similar to UP|Q8LLR3 (Q8LLR3) Ethylene-responsive element binding
protein 1, partial (33%)
Length = 580
Score = 74.7 bits (182), Expect = 8e-15
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 5 KKFRGVRQRHWGSWVSEIRHPLLK-RRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFP 63
K+FRGVR+R WG + +EIR P RVWLGT+ET EEA AYD AA + GR AK NFP
Sbjct: 291 KRFRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETEEEAGLAYDRAAFKIRGRKAKLNFP 470
Query: 64 INVENQTNSISSS 76
+ + T ++S
Sbjct: 471 HLIGSDTQPETAS 509
>TC13814 similar to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein, partial
(20%)
Length = 535
Score = 74.3 bits (181), Expect = 1e-14
Identities = 36/62 (58%), Positives = 42/62 (67%)
Frame = +2
Query: 2 VHSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTN 61
V +RG+RQR WG W +EIR P RV LGTF TAEEAA+AYD+AA + G AK N
Sbjct: 323 VRKNLYRGIRQRPWGKWAAEIRDPRKGVRVGLGTFNTAEEAAQAYDDAAKRIRGDKAKLN 502
Query: 62 FP 63
FP
Sbjct: 503 FP 508
>TC9975 similar to UP|AAR15448 (AAR15448) AP2 transcription factor, partial
(41%)
Length = 865
Score = 72.8 bits (177), Expect = 3e-14
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 5 KKFRGVRQRHWGSWVSEIRHPLLK-RRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFP 63
+++RGVR+R WG + +EIR P K RVWLGTF+T +AAKAYD AA M GR A NFP
Sbjct: 178 RRYRGVRRRPWGKFAAEIRDPTRKGTRVWLGTFDTEIDAAKAYDYAAFRMRGRKAILNFP 357
Query: 64 INVENQTNSISSS 76
+ + S+S
Sbjct: 358 LEAGKASPKPSNS 396
>TC13128 similar to AAS46630 (AAS46630) At5g21960, partial (40%)
Length = 512
Score = 72.8 bits (177), Expect = 3e-14
Identities = 31/62 (50%), Positives = 47/62 (75%)
Frame = +2
Query: 4 SKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFP 63
S +RGVR+R WG +VSEIR P ++R+WLG++++AE+AA+A+D A + GR+ + NFP
Sbjct: 167 SSIYRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAEKAARAFDAAMFCLRGRSGRFNFP 346
Query: 64 IN 65
N
Sbjct: 347 DN 352
>TC19692 similar to UP|Q9LYD3 (Q9LYD3) Transcription factor like protein,
partial (29%)
Length = 454
Score = 72.8 bits (177), Expect = 3e-14
Identities = 34/57 (59%), Positives = 40/57 (69%)
Frame = +3
Query: 7 FRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFP 63
+RGVR R WG WVSEIR P K R+WLGTF T E AA+A+D AA+ + G A NFP
Sbjct: 282 YRGVRMRTWGKWVSEIREPRKKSRIWLGTFCTPEMAARAHDVAALSIKGSAAILNFP 452
>TC8031 similar to UP|Q9FR33 (Q9FR33) Ripening regulated protein DDTFR10/A
(Fragment), partial (44%)
Length = 1109
Score = 72.4 bits (176), Expect = 4e-14
Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = +2
Query: 7 FRGVRQRHWGSWVSEIRHPLLK-RRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFPIN 65
+RGVRQR WG + +EIR P + RVWLGTF+TA EAAKAYD AA + G A NFP++
Sbjct: 551 YRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLD 730
Query: 66 V 66
V
Sbjct: 731 V 733
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.313 0.127 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,272,852
Number of Sequences: 28460
Number of extensions: 44469
Number of successful extensions: 284
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of query: 175
length of database: 4,897,600
effective HSP length: 84
effective length of query: 91
effective length of database: 2,506,960
effective search space: 228133360
effective search space used: 228133360
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.6 bits)
Medicago: description of AC149206.9