BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149197.10 - phase: 0
(330 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14875 similar to UP|Q9VNX6 (Q9VNX6) CG7421-PA, partial (4%) 116 5e-47
TC12221 176 5e-45
TC8413 weakly similar to UP|Q9ZSE0 (Q9ZSE0) PrMC3, partial (49%) 170 3e-43
TC9128 154 2e-38
AV765621 139 9e-34
TC15384 weakly similar to UP|Q9LVB8 (Q9LVB8) HSR203J protein-lik... 134 2e-32
TC18964 130 3e-31
TC15380 similar to UP|Q8H5P5 (Q8H5P5) OJ1003_C06.27 protein, par... 122 6e-29
TC8491 115 1e-26
TC8656 similar to UP|Q9LVB8 (Q9LVB8) HSR203J protein-like protei... 103 4e-23
TC10063 84 2e-17
BP069179 59 4e-17
TC11814 similar to GB|AAP37709.1|30725374|BT008350 At5g06570 {Ar... 65 2e-11
TC11788 weakly similar to UP|Q8H5P5 (Q8H5P5) OJ1003_C06.27 prote... 61 2e-10
TC10559 61 3e-10
TC12874 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial (... 60 4e-10
AU089411 55 1e-08
AV423956 49 2e-06
TC10961 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial (... 47 3e-06
TC15393 similar to UP|BAD09184 (BAD09184) Eukaryotic translation... 33 0.066
>TC14875 similar to UP|Q9VNX6 (Q9VNX6) CG7421-PA, partial (4%)
Length = 1240
Score = 116 bits (290), Expect(2) = 5e-47
Identities = 54/155 (34%), Positives = 89/155 (56%)
Frame = +3
Query: 15 EIVTEMGNILRIFSDGSIERPKQSPFAPPSLNDPNTGISSKDIQIPHNPTISSRIYLPKI 74
++V E ++ R++ DG +ER + PP D T + SKD+ I + +++R+YLP
Sbjct: 33 DVVREFPHLFRLYKDGRVERLMGTDTTPPG-TDHLTAVQSKDVNINPDTGVAARLYLPP- 206
Query: 75 TNPLSKFPILVYFHGGVFMFESTFSKKYHEHLKTFASQANVIIVSIEYSLAPEYPLPTCY 134
N + P+L+Y HGG F + ++ YH HL A++AN ++VS+ Y LAPE+PLP Y
Sbjct: 207 -NAANNLPLLIYIHGGAFCICTPYNNAYHRHLNNVAAKANAVVVSVHYRLAPEHPLPIAY 383
Query: 135 HDCWAALKWISSHSNNNINNPEPWLIEHGNFNKLF 169
D W A++W + +PWL +H + + +F
Sbjct: 384 DDTWEAIQWAAGLH-------DPWLKDHADPDLVF 467
Score = 88.2 bits (217), Expect(2) = 5e-47
Identities = 52/156 (33%), Positives = 80/156 (50%)
Frame = +2
Query: 175 AGANIAHNIAIQAGLENLPCDVKILGAIIIHPYFYSANPIGSEPIIEPENNIIHTFWHFA 234
AGANIAH++A++ N P +K+ G ++IHP+F N+ F
Sbjct: 488 AGANIAHSMAMRG---NAPGALKLQGMVLIHPFF--------------GNDERDKLAEFL 616
Query: 235 YPNAPFGIDNPRFNPLGEGAPSLEKLGCSRIIVCVAGKDKLRERGVWYWEGVKNSGWKGK 294
+P GID+PR + + P + LGC +++V A D LRERG Y E +K SGW G
Sbjct: 617 FPTYG-GIDDPRIHAPRD--PKISGLGCGKVLVITAENDFLRERGRSYHEALKKSGWSGT 787
Query: 295 LEFFEEKDEGHVYQLVKPESESAKIFIQRLVGFVQE 330
+E E + EGH + L P E + + + F+++
Sbjct: 788 VEMVETQGEGHCFHLFDPTLEKSVALVNQFSSFIKQ 895
>TC12221
Length = 486
Score = 176 bits (446), Expect = 5e-45
Identities = 79/124 (63%), Positives = 95/124 (75%)
Frame = +2
Query: 207 YFYSANPIGSEPIIEPENNIIHTFWHFAYPNAPFGIDNPRFNPLGEGAPSLEKLGCSRII 266
+F S+ PIGSEPIIEPE NI H W+ YP+AP G+DNP+ NP+G GAPSL LGCSRII
Sbjct: 2 FFNSSYPIGSEPIIEPEQNIDHKIWNLVYPSAPGGVDNPKLNPVGPGAPSLATLGCSRII 181
Query: 267 VCVAGKDKLRERGVWYWEGVKNSGWKGKLEFFEEKDEGHVYQLVKPESESAKIFIQRLVG 326
VCVAGKD+ ++R VWY+E V SGW+G LE FEE+DE H+Y L KPESESAK +RL
Sbjct: 182 VCVAGKDRFKDRAVWYYEAVNKSGWQG*LELFEEEDEDHIYHLFKPESESAKKLFKRLAS 361
Query: 327 FVQE 330
F+ E
Sbjct: 362 FLHE 373
>TC8413 weakly similar to UP|Q9ZSE0 (Q9ZSE0) PrMC3, partial (49%)
Length = 1092
Score = 170 bits (430), Expect = 3e-43
Identities = 104/325 (32%), Positives = 176/325 (54%), Gaps = 14/325 (4%)
Frame = +2
Query: 19 EMGNILRIFSDGSIERPKQSPFAPPSLNDPNTGISSKDIQIPHNPTISSRIYLPKITNPL 78
E + L+++SDG ++R P P+ + P+ G SKD+ I + I+ RI+LP N
Sbjct: 5 EAPDFLQVYSDGLVKR--FDPETVPASSKPSNGYKSKDVVIDPSKPITGRIFLPHFENQQ 178
Query: 79 SKFPILVYFHGGVFMFESTFSKKYHEHLKTFASQANVIIVSIEYSLAPEYPLPTCYHDCW 138
+ P+LVYFHGG F ST YH L F+ + I++S++Y LAPE+ LP Y DC+
Sbjct: 179 NLLPVLVYFHGGGFCIGSTTWLGYHHFLGDFSVASQSIVLSVDYRLAPEHRLPAAYEDCY 358
Query: 139 AALKWISSHSNNNINNPEPWLIEHGNFNKLFIGGDSAGANIAHNIAIQAGLENLPCDVKI 198
AL+W++ +++ EPWL + + +++F+ G+SAG NIAH++ ++ N DV +
Sbjct: 359 VALQWLAEQASS-----EPWL-QGADISRVFLSGESAGGNIAHHVFVKTTQRN--NDVLV 514
Query: 199 L---GAIIIHPYFYSANPIGSEPIIEPENN----IIHTFWHFAYPNAP----FGIDNPRF 247
L G ++IHPYF S E + ++ + FW + P FG + +
Sbjct: 515 LPI*GLMVIHPYFGSEERTEKEEAVADDDKECVAMNDMFWRLSIPEDSNRDYFGCNFEKH 694
Query: 248 N---PLGEGAPSLEKLGCSRIIVCVAGKDKLRERGVWYWEGVKNSGWKGKLEFFEEKDEG 304
+ + P +E V VAG+D L+ERGV Y E +K G K +++ E K+E
Sbjct: 695 DVDASVWSQFPGIE--------VYVAGRDFLKERGVMYAEFLKKKGVK-EVKLVEAKEEP 847
Query: 305 HVYQLVKPESESAKIFIQRLVGFVQ 329
H++ + P+S++ ++ ++ F++
Sbjct: 848 HIFHIFYPQSDATRLLQSQMSHFMK 922
>TC9128
Length = 678
Score = 154 bits (389), Expect = 2e-38
Identities = 75/166 (45%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
Frame = +2
Query: 3 STTPTTPKTITKEIVTEMGNILRIFSDGSIERPKQSPFAPPSLNDPNTGISSKDIQIPHN 62
S+T + T T+E+ ++ I++++ +G +ER F P L DP T + SKD+ I
Sbjct: 188 SSTMDSSSTNTEEVAYDLSPIMKVYKNGRVERLAGVDFVPTGL-DPKTNVESKDVVISKE 364
Query: 63 PTISSRIYLPKITNPL-SKFPILVYFHGGVFMFESTFSKKYHEHLKTFASQANVIIVSIE 121
IS+RI++PK TNP K P+LVYFHGG F E+ FS YH ++ + AS ANVI VS+
Sbjct: 365 DGISARIFIPKSTNPPPQKLPVLVYFHGGAFCIETPFSANYHNYVTSVASLANVIGVSVH 544
Query: 122 YSLAPEYPLPTCYHDCWAALKWISSHSNNNINNPEPWLIEHGNFNK 167
Y APE+P+P + D W ALKW++SH N P+PWL EHG+F K
Sbjct: 545 YRRAPEHPVPIAHEDSWRALKWVASHVGG--NGPDPWLNEHGDFGK 676
>AV765621
Length = 529
Score = 139 bits (349), Expect = 9e-34
Identities = 61/137 (44%), Positives = 92/137 (66%)
Frame = -1
Query: 192 LPCDVKILGAIIIHPYFYSANPIGSEPIIEPENNIIHTFWHFAYPNAPFGIDNPRFNPLG 251
LP DVKI GA++ P F+S+ P+ EP+ E ++ W+F YP+AP GIDNP NPL
Sbjct: 526 LPGDVKIAGALLAFPLFWSSYPVLEEPVEGFEQSLSRKVWNFVYPDAPGGIDNPLINPLA 347
Query: 252 EGAPSLEKLGCSRIIVCVAGKDKLRERGVWYWEGVKNSGWKGKLEFFEEKDEGHVYQLVK 311
+GAPSL G +++++ VAG D+LR+RG+W++E VK S W+G +E E H +Q+
Sbjct: 346 DGAPSLTTFGSNKMLIFVAGNDELRDRGIWFYEAVKKSEWEGDVELIRVDGEEHCFQIYH 167
Query: 312 PESESAKIFIQRLVGFV 328
PESE++K ++R+ F+
Sbjct: 166 PESENSKDMMKRIASFL 116
>TC15384 weakly similar to UP|Q9LVB8 (Q9LVB8) HSR203J protein-like protein,
partial (21%)
Length = 1193
Score = 134 bits (337), Expect = 2e-32
Identities = 92/261 (35%), Positives = 134/261 (51%), Gaps = 9/261 (3%)
Frame = +1
Query: 29 DGSIERPKQSPFAPPSLNDPNTGISSKDIQIPHNPTISSRIYLP-KITNPLSKFPILVYF 87
+GS+ RP + P +PPSLN P + SKD+ I + +RIYLP K + SK P++V+F
Sbjct: 166 NGSVTRPNKPPESPPSLN-PTLPVLSKDLTINKSKGTWARIYLPRKALDHSSKLPLVVFF 342
Query: 88 HGGVFMFESTFSKKYHEHLKTFASQANVIIVSIEYSLAPEYPLPTCYHDCWAALKWISSH 147
HGG F+F S S +H A+ ++ S+EY LAPE+ LP Y D AL WI +
Sbjct: 343 HGGGFIFLSAASTIFHVFCFNMANDVEAVVASVEYRLAPEHRLPAAYDDAVEALHWIKT- 519
Query: 148 SNNNINNPEPWLIEHGNFNKLFIGGDSAGANIAHNIAIQAGLENLPCDVKILGAIIIHPY 207
N + WLI H ++ +F+ G SAG NIA+N ++A + I G I++ P+
Sbjct: 520 -----NQKDDWLINHVEYSNVFLMGGSAGGNIAYNAGLRATAGDKQVS-NIQGLILVQPF 681
Query: 208 FYSANPIGSEPIIEPENNII----HTFWHFAYPNAPFGIDNPRFNP-LGEGAPSLE---K 259
F GSE + ++++ W + P DN NP +G G LE +
Sbjct: 682 FSGTLRTGSELRMVNDSHLSLCSNDMLWELSLP-VGVNRDNEYCNPAVGNGPVRLEEIKR 858
Query: 260 LGCSRIIVCVAGKDKLRERGV 280
LG RI+V D L +R V
Sbjct: 859 LGW-RILVTGCSGDPLMDRQV 918
>TC18964
Length = 397
Score = 130 bits (327), Expect = 3e-31
Identities = 69/135 (51%), Positives = 92/135 (68%), Gaps = 1/135 (0%)
Frame = +3
Query: 1 MASTTPTTPKTITKEIVTEMGNILRIFSDGSIERPKQSPFAPPSLNDPNTGISSKDIQIP 60
MAS T TTP TKEI ++ +LR++ DG++ER SP P +DP T +SSKDI I
Sbjct: 3 MASAT-TTP---TKEIDRDLPPLLRVYKDGTVERLLGSPVVPAIPHDPETEVSSKDIVIS 170
Query: 61 HNPTISSRIYLPKITNPLS-KFPILVYFHGGVFMFESTFSKKYHEHLKTFASQANVIIVS 119
P IS+RI+LPK +NP + K PIL+Y+HGG F ES FS + +L AS++NV++VS
Sbjct: 171 QTPLISARIHLPKQSNPQNPKVPILIYYHGGAFCLESAFSFLHQRYLNIVASRSNVVVVS 350
Query: 120 IEYSLAPEYPLPTCY 134
+EY LAPE+PLP Y
Sbjct: 351 VEYRLAPEHPLPAAY 395
>TC15380 similar to UP|Q8H5P5 (Q8H5P5) OJ1003_C06.27 protein, partial (28%)
Length = 1306
Score = 122 bits (307), Expect = 6e-29
Identities = 89/306 (29%), Positives = 149/306 (48%), Gaps = 15/306 (4%)
Frame = +1
Query: 5 TPTTPKTITKE---------IVTEMGNILRIFSDGSIERPKQSPF---APPSLNDPNTGI 52
T TTP T+ K +++ + N R S+G++ R + PP+ P G+
Sbjct: 70 TTTTPPTMAKLPWHVRLSIFLLSALSNTSRR-SNGTVNRRIFNLLDRKVPPNTK-PVDGV 243
Query: 53 SSKDIQIPHNPTISSRIYLPKITNPLSKFPILVYFHGGVFMFESTFSKKYHEHLKTFASQ 112
SS D+ + + R++ P + + P++V+FHGG F F S S ++ + F
Sbjct: 244 SSSDVTMDPTRDLWFRLFTPSAASSAASLPLVVFFHGGGFSFMSPSSIQFDTVCRQFCRS 423
Query: 113 ANVIIVSIEYSLAPEYPLPTCYHDCWAALKWISSHSNNNINNPEPWLIEHGNFNKLFIGG 172
+ ++VS+ Y LAPE+ PT Y D + ALK+I + + L + K F+ G
Sbjct: 424 FHAVVVSVNYRLAPEHRYPTQYEDGFDALKFIDQNGD--------VLPRSADVRKCFLAG 579
Query: 173 DSAGANIAHNIAIQAGLENLPCDVKILGAIIIHPYFYSANPIGSEPIIE--PENNIIHTF 230
DSAG N+AH++A++ E L +KI+G I + P+F GSE ++ P ++ +
Sbjct: 580 DSAGGNLAHHVAVRVARERLQ-SIKIIGLISLQPFFGGEERTGSEIRLKRVPFISVDISD 756
Query: 231 WHF-AYPNAPFGIDNPRFNPLGEGAPSLEKLGCSRIIVCVAGKDKLRERGVWYWEGVKNS 289
WH+ + D+ N G A + L +V V G D LR+ V Y+E ++ S
Sbjct: 757 WHWKVFLPTGSNRDHDAVNVSGPNAEDISGLDYPNTLVIVGGFDPLRDWQVRYYEWLRKS 936
Query: 290 GWKGKL 295
G + +L
Sbjct: 937 GKEAQL 954
>TC8491
Length = 643
Score = 115 bits (287), Expect = 1e-26
Identities = 58/144 (40%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Frame = +1
Query: 188 GLENLPCD-VKILGAIIIHPYFYSANPIGSEPIIEPENNIIHTFWHFAYPNAPFGIDNPR 246
G E L D V+I G + +HPYF+ IG E +H W F+YP G D+P
Sbjct: 1 GSEGLGFDGVRIEGLVYVHPYFWGGERIGKEGDRPEYVQKVHDLWRFSYPTTS-GSDDPL 177
Query: 247 FNPLGEGAPSLEKLGCSRIIVCVAGKDKLRERGVWYWEGVKNSGWKGKLEFFEEKDEGHV 306
NP + P+L KL C R++VCVAG D LR+RG +Y E ++ GW G++E E KDE HV
Sbjct: 178 LNPAKD--PNLGKLACGRVLVCVAGNDLLRDRGWYYQELLEKIGWSGEVEVLEAKDEEHV 351
Query: 307 YQLVKPESESAKIFIQRLVGFVQE 330
+ + KP E+A + + +V F+++
Sbjct: 352 FHMFKPTCENAMVLLNPVVSFIKQ 423
>TC8656 similar to UP|Q9LVB8 (Q9LVB8) HSR203J protein-like protein, partial
(35%)
Length = 1114
Score = 103 bits (257), Expect = 4e-23
Identities = 70/244 (28%), Positives = 122/244 (49%), Gaps = 15/244 (6%)
Frame = +3
Query: 29 DGSIERPKQSPFAPPSLNDP-NTGISSKDIQIPHNPTISSRIYLPK--ITNPLSK----- 80
+G++ R + P PPS + +T + SKD+ I + +RIY+P + + L +
Sbjct: 150 NGTLTRLQPPPETPPSPHPTLHTPVISKDLTINQSKQTWARIYIPHKALVSTLRRHLKRR 329
Query: 81 FPILVYFHGGVFMFESTFSKKYHEHLKTFASQANVIIVSIEYSLAPEYPLPTCYHDCWAA 140
P++V++HGG F+ S S +H+ A+ ++VS+ Y LAPE+ LP Y D A
Sbjct: 330 LPLIVFYHGGGFILYSAASTYFHDFCNRMANITQSVVVSVNYHLAPEHRLPAAYEDSVEA 509
Query: 141 LKWISSHSNNNINNPEPWLIEHGNFNKLFIGGDSAGANIAHNIAIQAG--LENL-PCDVK 197
L WI + + + WL H +F++ ++ G+SAG NIA+ ++A L+ + P ++K
Sbjct: 510 LHWIKT-------SKDTWLTRHADFSRCYLMGESAGGNIAYFAGLRAATQLDQIKPLNIK 668
Query: 198 ILGAIIIHPYFYSANPIGSEPIIEPENN----IIHTFWHFAYPNAPFGIDNPRFNPLGEG 253
L ++I P+F SE + + I W+ + P D+ NP +G
Sbjct: 669 AL--VLIQPFFGGTKRTSSELRLVEDGTIPQPITDMMWNLSLP-VGADRDHEYSNPTVKG 839
Query: 254 APSL 257
P +
Sbjct: 840 GPKV 851
>TC10063
Length = 679
Score = 84.3 bits (207), Expect = 2e-17
Identities = 37/90 (41%), Positives = 57/90 (63%)
Frame = +3
Query: 241 GIDNPRFNPLGEGAPSLEKLGCSRIIVCVAGKDKLRERGVWYWEGVKNSGWKGKLEFFEE 300
G D+P NP E AP E +GC++++V VA KD L+ERG Y + + NS W+G EF+E
Sbjct: 3 GSDDPLINPFVEEAPGFEGVGCNKVLVIVAEKDILKERGKLYHKKLVNSSWQGTAEFYEI 182
Query: 301 KDEGHVYQLVKPESESAKIFIQRLVGFVQE 330
+ E HV+ + P+ ++AK +R+ F+ E
Sbjct: 183 QGEDHVFHIFNPDCDNAKSLFKRIAAFINE 272
>BP069179
Length = 505
Score = 58.9 bits (141), Expect(2) = 4e-17
Identities = 26/64 (40%), Positives = 40/64 (61%)
Frame = -3
Query: 265 IIVCVAGKDKLRERGVWYWEGVKNSGWKGKLEFFEEKDEGHVYQLVKPESESAKIFIQRL 324
++VCVAG D L++R + E ++ SGW+G +E E K EGHV+ L KP E+A ++
Sbjct: 275 LLVCVAGNDLLKDRDWYLKELLEKSGWQGLVEVVEAKGEGHVFHLFKPNCENAVSLFNQI 96
Query: 325 VGFV 328
F+
Sbjct: 95 ASFI 84
Score = 45.1 bits (105), Expect(2) = 4e-17
Identities = 28/81 (34%), Positives = 39/81 (47%)
Frame = -2
Query: 185 IQAGLENLPCDVKILGAIIIHPYFYSANPIGSEPIIEPENNIIHTFWHFAYPNAPFGIDN 244
I+ G E LP + G +IH +F+ IGSE + +W F P G D+
Sbjct: 504 IRFGTEGLP-GFNLEGIALIHAFFWGVERIGSESEKPEGVAFMENWWRFTCPTTT-GSDD 331
Query: 245 PRFNPLGEGAPSLEKLGCSRI 265
P NP + P+L KLGC R+
Sbjct: 330 PLLNPAKD--PNLGKLGCKRL 274
>TC11814 similar to GB|AAP37709.1|30725374|BT008350 At5g06570 {Arabidopsis
thaliana;}, partial (23%)
Length = 507
Score = 64.7 bits (156), Expect = 2e-11
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Frame = +2
Query: 5 TPTTPKTITKEIVTEMGNILRIFSDGSIERPKQSPFAPPSLNDPNTGISSKDIQIPHNPT 64
T TT +V + L++FSDGS+ R F ++ D ++ KD
Sbjct: 23 TITTKMDSLPHVVEDCMGFLQLFSDGSVHRSNDIKFHAAAVED--NSVTFKDCLFDKKFN 196
Query: 65 ISSRIYLPKITNPLS-------KFPILVYFHGGVFMFESTFSKKYHEHLKTFASQANVII 117
+S R+Y P N + K P++++ HGG F F S H AS ++
Sbjct: 197 LSLRLYKPSSQNTNNSNHNKNMKLPMIMFLHGGGFCFGSRTWPHIHNCCMRLASGLQAMV 376
Query: 118 VSIEYSLAPEYPLPTCYHDCW 138
V+ +Y LAPE+ LP D W
Sbjct: 377 VAPDYRLAPEHRLPAAVDDPW 439
>TC11788 weakly similar to UP|Q8H5P5 (Q8H5P5) OJ1003_C06.27 protein, partial
(15%)
Length = 469
Score = 61.2 bits (147), Expect = 2e-10
Identities = 28/87 (32%), Positives = 46/87 (52%)
Frame = +2
Query: 48 PNTGISSKDIQIPHNPTISSRIYLPKITNPLSKFPILVYFHGGVFMFESTFSKKYHEHLK 107
P G+S+KD+ + + R+++P + P+LV+FHGG F + S S Y +
Sbjct: 206 PVNGVSTKDVTVDAARNLWFRLFIPTSATDTASLPVLVFFHGGGFTYLSPASFAYDAVCR 385
Query: 108 TFASQANVIIVSIEYSLAPEYPLPTCY 134
F + I+VS+ Y L PE+ P+ Y
Sbjct: 386 RFCRRVPAIVVSVNYRLCPEHRFPSQY 466
>TC10559
Length = 456
Score = 60.8 bits (146), Expect = 3e-10
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +2
Query: 214 IGSEPIIEPENNIIHTFWHFAYPNAPFGIDNPRFNPLGEGAPSLEKLGCSRIIVCVAGKD 273
IGSE ++ W A P G+D+P FNP+ + P++ ++ C R++VCVA D
Sbjct: 8 IGSEAEKPQHAVLVERLWRLASPTTG-GLDDPLFNPVMD--PNMGRVPCKRVLVCVAEND 178
Query: 274 KLRERGVWYWEGVKNSGWKG 293
L++RG +Y E ++ SGW G
Sbjct: 179 FLKDRGWYYKESLEKSGWHG 238
>TC12874 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial (42%)
Length = 512
Score = 60.5 bits (145), Expect = 4e-10
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Frame = +3
Query: 14 KEIVTEMGNILRIFSDGSIERPKQSP--------FAPPSLNDPNTGISSKDI--QIPHNP 63
K++V E+ LRI+ DGS++R P APP + G+ +D+
Sbjct: 81 KKLVDEVSGWLRIYDDGSVDRTWTGPPEVKFLVDLAPPHEQFID-GVVVRDVITTTRDGS 257
Query: 64 TISSRIYLPKIT-NPLSKFPILVYFHGGVFMFESTFSKKYHEHLKTFASQANVIIVSIEY 122
+R+Y+P+ T + K PIL++FHGG F Y++ F I VS
Sbjct: 258 DNRARLYMPEKTPDDKHKLPILLHFHGGGFCISEPDCFMYYQIYTRFVRSTRSICVSPFL 437
Query: 123 SLAPEYPLPTCYHDCWAALKWISS 146
APE LP D +A L+W+ S
Sbjct: 438 RRAPENRLPAAVDDAFATLQWLQS 509
>AU089411
Length = 448
Score = 55.5 bits (132), Expect = 1e-08
Identities = 41/133 (30%), Positives = 62/133 (45%), Gaps = 10/133 (7%)
Frame = +2
Query: 158 WLIEHGNFNKLFIGGDSAGANIAHNIAIQ----AGLENLPCDVKILGAIIIHPYF----- 208
W NF+ +++ GDSAGANI + +A + G P ++K G I+I P+F
Sbjct: 41 WWTAKCNFSSVYLAGDSAGANIXYYVATRLAACEGAALRPLNLK--GLILIQPFFGGEVX 214
Query: 209 -YSANPIGSEPIIEPENNIIHTFWHFAYPNAPFGIDNPRFNPLGEGAPSLEKLGCSRIIV 267
S + P T+W A P+ G D+P NPL + LE+L +V
Sbjct: 215 TVSXKCMAQSPGSALNLAASDTYWRLALPSGA-GRDHPWCNPLVXXSLKLEELKLFPTLV 391
Query: 268 CVAGKDKLRERGV 280
CV+ D L +R +
Sbjct: 392 CVSXMDILXDRNL 430
>AV423956
Length = 388
Score = 48.5 bits (114), Expect = 2e-06
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Frame = +2
Query: 156 EPWLIEHGNFNKLFIGGDSAGANIAHNIAIQAGLENLPCD-VKILGAIIIHPYFYSANPI 214
EPWL HG+ + + G S GANIA +A +A D VK++ ++++P+F +
Sbjct: 62 EPWLAAHGDPTRCVLIGASCGANIADYVARKAVEGGKLLDPVKVVAQVLLYPFFVGSVLT 241
Query: 215 GSEPIIEPENNIIH------TFWHFAYPNAPFGIDNPRFNPLGEG 253
SE I+ N+ + W P F +D+P NPL G
Sbjct: 242 HSE--IKLANSYFYDKAMCMLAWKLFLPEDEFSLDHPAANPLVAG 370
>TC10961 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial (35%)
Length = 440
Score = 47.4 bits (111), Expect = 3e-06
Identities = 32/120 (26%), Positives = 57/120 (46%), Gaps = 9/120 (7%)
Frame = +1
Query: 9 PKTITKEIVTEMGNILRIFSDGSIERPKQSPFAPPSLNDPNT-------GISSKDIQIPH 61
P + K++V ++ L+I+ DGS++R P L +P G++ +D+ H
Sbjct: 67 PTMVHKKLVDDVSGGLKIYDDGSVDRTWTGPPEVKFLIEPVPPHQQFIEGVAIRDVTTTH 246
Query: 62 NPTISS-RIYLP-KITNPLSKFPILVYFHGGVFMFESTFSKKYHEHLKTFASQANVIIVS 119
+ + + R+Y+P K ++ K PIL++FHGG F Y++ I VS
Sbjct: 247 DGSGNRIRLYMPEKTSDDKHKLPILLHFHGGGFCISEPDYYMYYQIYTRLVRSTRSICVS 426
>TC15393 similar to UP|BAD09184 (BAD09184) Eukaryotic translation initiation
factor 3 subunit (EIF-3)-like, partial (4%)
Length = 1164
Score = 33.1 bits (74), Expect = 0.066
Identities = 19/66 (28%), Positives = 30/66 (44%)
Frame = -1
Query: 167 KLFIGGDSAGANIAHNIAIQAGLENLPCDVKILGAIIIHPYFYSANPIGSEPIIEPENNI 226
K I +S AN HN+ +Q N + + HP + P+ EP++EP +
Sbjct: 609 KYLISNESTMANSTHNLHVQ----NFKPQPWVWTWVSYHPMMKTPFPVQLEPVLEPA--L 448
Query: 227 IHTFWH 232
+ FWH
Sbjct: 447 MGRFWH 430
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.318 0.138 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,795,647
Number of Sequences: 28460
Number of extensions: 113396
Number of successful extensions: 742
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of query: 330
length of database: 4,897,600
effective HSP length: 91
effective length of query: 239
effective length of database: 2,307,740
effective search space: 551549860
effective search space used: 551549860
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Medicago: description of AC149197.10