BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149129.9 + phase: 0
(388 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC17992 similar to UP|O80512 (O80512) At2g44730 protein, partial... 162 9e-41
TC18607 similar to UP|O80512 (O80512) At2g44730 protein, partial... 119 9e-28
TC11553 weakly similar to UP|BAD10712 (BAD10712) Proline-rich pr... 92 2e-19
BI417655 74 5e-14
TC19007 similar to UP|Q8W3M8 (Q8W3M8) 6b-interacting protein 1, ... 49 1e-06
BP054375 45 2e-05
TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, part... 44 5e-05
AV415922 43 8e-05
TC14287 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein k... 39 9e-05
BP030058 42 2e-04
AV410227 42 2e-04
AV408970 42 2e-04
BP044109 41 3e-04
AV419448 41 3e-04
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu... 41 3e-04
BP058026 41 3e-04
TC11863 weakly similar to UP|O22458 (O22458) Hydroxyproline-rich... 41 3e-04
TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate... 41 4e-04
TC14145 similar to UP|Q7XXS4 (Q7XXS4) Thiamine biosynthetic enzy... 41 4e-04
BP038942 40 5e-04
>TC17992 similar to UP|O80512 (O80512) At2g44730 protein, partial (16%)
Length = 560
Score = 162 bits (410), Expect = 9e-41
Identities = 95/145 (65%), Positives = 108/145 (73%), Gaps = 4/145 (2%)
Frame = +3
Query: 234 VSVAQPGSKFY--PKMNNNSESGSR--INGGTRLVKERVVLGKRERERDVERERERDPIG 289
VSVAQPGSK + KMNN S+SGSR NGG R VKER +RERDP+G
Sbjct: 3 VSVAQPGSKLFGNQKMNNPSDSGSRGFANGGNRGVKERPF--------GSGNQRERDPVG 158
Query: 290 EMVNAIKVLRDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAISEK 349
EMV+AIKVLRDGFVRMEQMKMEMA+EIE MRM+MEMKRTEMILESQQRIVEAFA+A+SEK
Sbjct: 159 EMVSAIKVLRDGFVRMEQMKMEMAKEIEQMRMDMEMKRTEMILESQQRIVEAFAQAVSEK 338
Query: 350 NKKRKLRKGNTINNNDNNIINNNGN 374
KK +KGN + + +NNN N
Sbjct: 339 QKK---KKGNPVASPSEP*LNNNRN 404
>TC18607 similar to UP|O80512 (O80512) At2g44730 protein, partial (16%)
Length = 516
Score = 119 bits (298), Expect = 9e-28
Identities = 59/73 (80%), Positives = 68/73 (92%)
Frame = +2
Query: 284 ERDPIGEMVNAIKVLRDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFA 343
ERDP+GE+V+AIKVL DGFVRMEQMKMEMA+EIE MR+E EMKRTEMILESQQRIVE+FA
Sbjct: 2 ERDPVGEVVSAIKVLGDGFVRMEQMKMEMAKEIEMMRIETEMKRTEMILESQQRIVESFA 181
Query: 344 KAISEKNKKRKLR 356
+AISE NKK+ +R
Sbjct: 182 RAISENNKKKNMR 220
>TC11553 weakly similar to UP|BAD10712 (BAD10712) Proline-rich protein
family-like, partial (27%)
Length = 493
Score = 91.7 bits (226), Expect = 2e-19
Identities = 56/158 (35%), Positives = 84/158 (52%), Gaps = 13/158 (8%)
Frame = -1
Query: 25 PLSLPAPPPPPTSSRRLPPPC-WTPEETSALIDSYRDKWYSLGRTNLKATHWQEVADAVA 83
PL + TS+ + P P WT +ET LI +Y++KWYSL R L++ W+EVA VA
Sbjct: 487 PLRMAILHSATTSAVKKPQPIPWTHQETVNLIRAYQEKWYSLKRGPLRSNQWEEVAVVVA 308
Query: 84 VRCP-NSSPVAKTAVQCRHKMEKLRKRYRSEIQKLRSLPVPRSRSSSSWVLFKAMDSMEK 142
RC + + +K+A+QCRHK++KLR+R+R+E + + P W F MD +E+
Sbjct: 307 ARCGYDFAHPSKSALQCRHKIDKLRQRHRAEKHRPATRP---------WQYFSLMDDLER 155
Query: 143 GPSPPS-------PPHKPENPN----HNANHNHIHSHN 169
GP P S PP E+ + +H H+
Sbjct: 154 GPLPISAHPLASLPPGVDEDEEDDEIEDGGEGDVHDHD 41
>BI417655
Length = 509
Score = 73.6 bits (179), Expect = 5e-14
Identities = 44/134 (32%), Positives = 66/134 (48%)
Frame = +2
Query: 40 RLPPPCWTPEETSALIDSYRDKWYSLGRTNLKATHWQEVADAVAVRCPNSSPVAKTAVQC 99
RL W+ L+++Y KW R LK W+EVA V+ R N++ KT QC
Sbjct: 131 RLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRA-NNTKSPKTQTQC 307
Query: 100 RHKMEKLRKRYRSEIQKLRSLPVPRSRSSSSWVLFKAMDSMEKGPSPPSPPHKPENPNHN 159
++K+E ++KRYRSE + ++SSW L+ +D + +G P SP +P+
Sbjct: 308 KNKIESMKKRYRSE-------SATATDAASSWPLYSRLDVLLRGTGPVSPLPQPQTAATA 466
Query: 160 ANHNHIHSHNLINH 173
A H N NH
Sbjct: 467 APSQSPHPSN--NH 502
>TC19007 similar to UP|Q8W3M8 (Q8W3M8) 6b-interacting protein 1, partial
(19%)
Length = 427
Score = 49.3 bits (116), Expect = 1e-06
Identities = 25/68 (36%), Positives = 37/68 (53%)
Frame = +1
Query: 31 PPPPPTSSRRLPPPCWTPEETSALIDSYRDKWYSLGRTNLKATHWQEVADAVAVRCPNSS 90
PP PT R CW+ E +S L+D++ ++ L R NL+ WQ+VADAV ++
Sbjct: 232 PPSRPTPVRE---DCWSEEASSTLVDAWGSRYLELNRGNLRQKDWQDVADAVNALHGHTK 402
Query: 91 PVAKTAVQ 98
+T VQ
Sbjct: 403 KTFRTDVQ 426
>BP054375
Length = 418
Score = 45.1 bits (105), Expect = 2e-05
Identities = 30/101 (29%), Positives = 46/101 (44%), Gaps = 19/101 (18%)
Frame = +1
Query: 2 ATSSPPPSSP----TESIPSP---PSAVPLPLSLPAPPPPPTSSRRLP------------ 42
A+ SPP S+ T + P+P P P L+L P P
Sbjct: 112 ASGSPPSSNGRITVTVAAPAPQAHPHPAPNTLALALPVQQPVKGSNGGGGSAGGGGGGGR 291
Query: 43 PPCWTPEETSALIDSYRDKWYSLGRTNLKATHWQEVADAVA 83
CW+ T+ LI+++ +++ L R NLK HW+EVA+ V+
Sbjct: 292 EDCWSEGATAVLIEAWGERYLELSRGNLKQKHWKEVAEIVS 414
Score = 29.3 bits (64), Expect = 1.2
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -3
Query: 10 SPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPCWTP 48
SP SI + + SLP PPPPP LPPP P
Sbjct: 344 SPQASISTAVAPSLQQSSLPPPPPPPA----LPPPPLLP 240
>TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, partial (22%)
Length = 505
Score = 43.9 bits (102), Expect = 5e-05
Identities = 24/49 (48%), Positives = 29/49 (58%)
Frame = +3
Query: 3 TSSPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPCWTPEET 51
TSS PP+SPT + + SA P P+P PPPTS+ PPP TP T
Sbjct: 225 TSSTPPTSPTSAAAATSSATP-----PSPSPPPTSASP-PPPSSTPNGT 353
Score = 30.4 bits (67), Expect = 0.52
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 3 TSSPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPP 44
++SPPP S T + +PPS+ P P+ P P+S R P
Sbjct: 312 SASPPPPSSTPN-GTPPSSSPATTPSPSRPSTPSSPTRASLP 434
Score = 28.9 bits (63), Expect = 1.5
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Frame = +3
Query: 2 ATSS---PPPS-SPTESIPSPPSAVP---LPLSLPAPPPPPT 36
ATSS P PS PT + P PPS+ P P S PA P P+
Sbjct: 267 ATSSATPPSPSPPPTSASPPPPSSTPNGTPPSSSPATTPSPS 392
Score = 28.9 bits (63), Expect = 1.5
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +1
Query: 8 PSSPTESIPS--PPSAVPLPLSLPAPPPPPTSSRRLP 42
P P +P PP +P L P PPPPP R P
Sbjct: 187 PPFPLPRLPPLVPPPPLPRLLRPPPPPPPPPPLRPRP 297
Score = 28.5 bits (62), Expect = 2.0
Identities = 13/31 (41%), Positives = 15/31 (47%)
Frame = +3
Query: 14 SIPSPPSAVPLPLSLPAPPPPPTSSRRLPPP 44
++ SP P P P PPP P LPPP
Sbjct: 45 NLVSPIQTTPPP---PPPPPSPNHRNNLPPP 128
Score = 27.3 bits (59), Expect = 4.4
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = +1
Query: 7 PPSSPTESIPSPPSAVPLP----LSLPAPPPPPTSSRRLPPP 44
P P +P P VP P L P PPPPP PPP
Sbjct: 175 PTLFPPFPLPRLPPLVPPPPLPRLLRPPPPPPP------PPP 282
Score = 26.9 bits (58), Expect = 5.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 10 SPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPCWTPEETSALIDS 57
SP ++ P PP PPPP + R PP + P T++ S
Sbjct: 54 SPIQTTPPPP-----------PPPPSPNHRNNLPPPFPPSLTTSFSTS 164
>AV415922
Length = 422
Score = 43.1 bits (100), Expect = 8e-05
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +1
Query: 357 KGNTINNNDNNIINNNGNNNNNNNNI 382
KG NN+DNN NNN NNNNNNNN+
Sbjct: 160 KGINTNNDDNNNNNNNNNNNNNNNNL 237
Score = 34.7 bits (78), Expect = 0.028
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +1
Query: 359 NTINNNDNNIINNNGNNNNNNNN 381
N+ N NN NNN NNNNNNNN
Sbjct: 154 NSKGINTNNDDNNNNNNNNNNNN 222
Score = 34.3 bits (77), Expect = 0.036
Identities = 17/30 (56%), Positives = 19/30 (62%)
Frame = +1
Query: 355 LRKGNTINNNDNNIINNNGNNNNNNNNIAS 384
+ N NNN+NN NNN NNNNNN I S
Sbjct: 166 INTNNDDNNNNNN--NNNNNNNNNNLPILS 249
>TC14287 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein kinase-like
protein (CBL-interacting protein kinase 5), partial
(75%)
Length = 1999
Score = 38.9 bits (89), Expect(2) = 9e-05
Identities = 35/119 (29%), Positives = 56/119 (46%), Gaps = 3/119 (2%)
Frame = +3
Query: 8 PSSPTESIP--SPPSAVPLPLSLPAPPPPPTSSRRLPPPCWTPEETSALIDSYRDKWYSL 65
PSSP +++P SP A P P P PPPPP+SS + PE +I + + L
Sbjct: 297 PSSPLQNLPHLSP*LATPPPP--PPPPPPPSSSTMV------PENPRNIIFNKYEMGRVL 452
Query: 66 GRTNL-KATHWQEVADAVAVRCPNSSPVAKTAVQCRHKMEKLRKRYRSEIQKLRSLPVP 123
G+ N K H + +A N + K + + K ++L K+ + E+ +R + P
Sbjct: 453 GQGNFAKVYHGRNLA-------TNENVAIKVIKKEKLKKDRLVKQIKREVSVMRLVRHP 608
Score = 26.6 bits (57), Expect = 7.6
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 2 ATSSPPPSSPTESIPSPPSAVP-LPLSLPAP---PPPPTSS 38
A+ S PPSSP S +P S P S P+P PPP T S
Sbjct: 1560 ASLSSPPSSPASSP*TPSSP*P*NSASSPSPQASPPPRTLS 1438
Score = 23.1 bits (48), Expect(2) = 9e-05
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 123 PRSRSSSSWVLFKA 136
PR +SSSSW + KA
Sbjct: 640 PRGKSSSSWSMSKA 681
>BP030058
Length = 455
Score = 42.0 bits (97), Expect = 2e-04
Identities = 22/43 (51%), Positives = 24/43 (55%)
Frame = -1
Query: 6 PPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPCWTP 48
PPP P+ PSPP P PL P+PPPPP S PPP P
Sbjct: 410 PPPPPPS---PSPP---PPPLPCPSPPPPPPSPPPPPPPSPPP 300
Score = 35.8 bits (81), Expect = 0.012
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -1
Query: 5 SPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPC 45
SP P P PSPP P P P P PPP P C
Sbjct: 392 SPSPPPPPLPCPSPPPPPPSPPPPPPPSPPPPKYPSCPQNC 270
Score = 35.8 bits (81), Expect = 0.012
Identities = 20/46 (43%), Positives = 23/46 (49%), Gaps = 5/46 (10%)
Frame = -1
Query: 4 SSPPPSSPTESIPSPPSAVPLPLSLPAPPPP-----PTSSRRLPPP 44
S PPP P S P PP + P P P+PPPP P + L PP
Sbjct: 386 SPPPPPLPCPSPPPPPPSPP-PPPPPSPPPPKYPSCPQNCNPLSPP 252
Score = 26.6 bits (57), Expect = 7.6
Identities = 15/43 (34%), Positives = 16/43 (36%)
Frame = -1
Query: 4 SSPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPCW 46
S PPP P+ P PS L PPP P P W
Sbjct: 335 SPPPPPPPSPPPPKYPSCPQNCNPLSPPPPRIIYVPGQPKPSW 207
>AV410227
Length = 428
Score = 41.6 bits (96), Expect = 2e-04
Identities = 23/43 (53%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 3 TSSPPPSSPTESIPSPPSAVPLP-LSLPAPPPPPTSSRRLPPP 44
T +PPPSSP PSP S+ P P ++ PAP PP SS PPP
Sbjct: 223 TPTPPPSSP----PSPASSPPPPSMTPPAPSTPPPSSA*SPPP 339
Score = 38.5 bits (88), Expect = 0.002
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +1
Query: 6 PPPSSPTESIPSPPSAVPLPLSLPAPPPPPTS----SRRLPPPCWTPEETS 52
PPPS+ + S SP S + + P P PPP+S + PPP TP S
Sbjct: 151 PPPSTASSSATSPTSPLSTSPTTPTPTPPPSSPPSPASSPPPPSMTPPAPS 303
Score = 38.5 bits (88), Expect = 0.002
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +1
Query: 2 ATSSPPPSSPTESIPSPPSAVPLPLSLPAP---PPPPTSSRRLPPPCWTPEETSA 53
++S+ P+SP + P+ P+ P P S P+P PPPP+ + PP TP +SA
Sbjct: 169 SSSATSPTSPLSTSPTTPTPTPPPSSPPSPASSPPPPSMT---PPAPSTPPPSSA 324
Score = 32.0 bits (71), Expect = 0.18
Identities = 20/49 (40%), Positives = 27/49 (54%), Gaps = 7/49 (14%)
Frame = +1
Query: 4 SSPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLP-------PPC 45
SSPPP P+ + P+P + P P S +PPPPP+ + P PPC
Sbjct: 262 SSPPP--PSMTPPAP--STPPPSSA*SPPPPPS*AGSPPAVEPLSAPPC 396
Score = 28.9 bits (63), Expect = 1.5
Identities = 12/17 (70%), Positives = 15/17 (87%)
Frame = -2
Query: 270 LGKRERERDVERERERD 286
+ +RERER+ ERERERD
Sbjct: 73 MAERERERERERERERD 23
Score = 28.1 bits (61), Expect = 2.6
Identities = 17/42 (40%), Positives = 22/42 (51%)
Frame = +1
Query: 2 ATSSPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPP 43
A S+PPPSS S P PPS P ++ PP ++ PP
Sbjct: 295 APSTPPPSS-A*SPPPPPS*AGSPPAVEPLSAPPCANSPSPP 417
>AV408970
Length = 195
Score = 41.6 bits (96), Expect = 2e-04
Identities = 21/34 (61%), Positives = 24/34 (69%)
Frame = +2
Query: 5 SPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSS 38
SPPP SP + SPPSA P P PAPPPPPT++
Sbjct: 101 SPPPPSPPATSSSPPSA-PSP---PAPPPPPTTT 190
Score = 40.0 bits (92), Expect = 7e-04
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = +2
Query: 5 SPPP------SSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPCWTP 48
SPPP S+P+ PSPP+ P S P+PP PP PPP TP
Sbjct: 62 SPPPVPLSAASAPSPPPPSPPATSSSPPSAPSPPAPP------PPPTTTP 193
Score = 36.2 bits (82), Expect = 0.010
Identities = 21/49 (42%), Positives = 28/49 (56%), Gaps = 4/49 (8%)
Frame = +2
Query: 4 SSPPPSSPTESIPSPPSAVPLPLSL---PAPPPP-PTSSRRLPPPCWTP 48
S+P P P+ PSPP P+PLS P+PPPP P ++ PP +P
Sbjct: 23 STPKP*LPSSPAPSPP---PVPLSAASAPSPPPPSPPATSSSPPSAPSP 160
Score = 29.6 bits (65), Expect = 0.89
Identities = 21/46 (45%), Positives = 24/46 (51%), Gaps = 6/46 (13%)
Frame = +3
Query: 5 SPPPSSPTESIPSPPSAVPLPL---SLPAPPPPPTSSRRL---PPP 44
S PP +P + +PLPL SL PPPPP RRL PPP
Sbjct: 18 SSPPQNPNSLL------LPLPLHHLSLSPPPPPP--RRRLHPHPPP 131
>BP044109
Length = 497
Score = 41.2 bits (95), Expect = 3e-04
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +2
Query: 3 TSSPP--PSS----PTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPCWTPEETSAL 54
++SPP PSS P ++PSPPS+ P S P+PP PP S PP TP +L
Sbjct: 272 STSPPETPSSSSHGPAPTLPSPPSS-STPTSTPSPPSPPNGSTLPSPPRATPTPAPSL 442
Score = 32.3 bits (72), Expect = 0.14
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 11/57 (19%)
Frame = +2
Query: 6 PPPSSPTESIPSPPS-----AVPLPLSLPAPPPPPTSSRRLPP------PCWTPEET 51
PPP + ++ PS S + P + PPP PTSS + PP P +P ET
Sbjct: 122 PPPPNKNKTTPSHASNATSKSTPRTQTPTTPPPSPTSSPKPPPSTFATKPSTSPPET 292
Score = 31.2 bits (69), Expect = 0.31
Identities = 17/31 (54%), Positives = 20/31 (63%), Gaps = 3/31 (9%)
Frame = +2
Query: 3 TSSPPPSSPTE--SIPSPPSAVPLPL-SLPA 30
TS+P P SP ++PSPP A P P SLPA
Sbjct: 356 TSTPSPPSPPNGSTLPSPPRATPTPAPSLPA 448
Score = 30.0 bits (66), Expect = 0.68
Identities = 19/51 (37%), Positives = 25/51 (48%)
Frame = +2
Query: 2 ATSSPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPCWTPEETS 52
ATS P + T + P PPS P S P PPP +++ P TP +S
Sbjct: 170 ATSKSTPRTQTPTTP-PPS----PTSSPKPPPSTFATKPSTSPPETPSSSS 307
>AV419448
Length = 382
Score = 41.2 bits (95), Expect = 3e-04
Identities = 27/67 (40%), Positives = 33/67 (48%), Gaps = 15/67 (22%)
Frame = +2
Query: 2 ATSSPPPSSP--TESIPSPP-------------SAVPLPLSLPAPPPPPTSSRRLPPPCW 46
+ S+PPPSSP T S P+PP S P P+S P+ PPT PPP
Sbjct: 134 SASAPPPSSPTATPSAPTPPLSAALSLASTATSSPSPSPISNPSASLPPTPP---PPPTK 304
Query: 47 TPEETSA 53
TP TS+
Sbjct: 305 TPSSTSS 325
Score = 36.2 bits (82), Expect = 0.010
Identities = 18/43 (41%), Positives = 23/43 (52%)
Frame = +2
Query: 2 ATSSPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPP 44
++S PPPS S+PSPP P P P+P +S PPP
Sbjct: 35 SSSHPPPSPSQPSLPSPPLHPPTP---PSPTASSWTSASAPPP 154
Score = 26.6 bits (57), Expect = 7.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 5 SPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSS 38
SP SS T + PPS+ P + P+ P PP S+
Sbjct: 110 SPTASSWTSASAPPPSS---PTATPSAPTPPLSA 202
>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (43%)
Length = 1038
Score = 41.2 bits (95), Expect = 3e-04
Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 10/57 (17%)
Frame = +2
Query: 2 ATSSPPPSS---PTESIP------SPPSAVPLPLS-LPAPPPPPTSSRRLPPPCWTP 48
A SSPPP S P +S P +PP A P P S PA PPPP ++ PPP TP
Sbjct: 335 AQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPFSPPPATPPPPAAT---PPPALTP 496
Score = 38.5 bits (88), Expect = 0.002
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +2
Query: 4 SSPPPSS---PTESIPSPPSAVP----LPLSLPAPPPPPTSSRRLPPPCWTPEETSA 53
SSPPP+S P +S P P S+ P P PA PPP S PP TP +A
Sbjct: 302 SSPPPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPFSPPPATPPPPAA 472
Score = 38.1 bits (87), Expect = 0.003
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = +2
Query: 4 SSPPPSSPTESIPSPPSAVPLPLSLPAP-----PPPPTSSRRLPPPCWTP 48
+SPPP SP + P PP+A P P P P P P + P P P
Sbjct: 419 ASPPPFSPPPATPPPPAATPPPALTPVPATSPAPAPAKVKSKSPAPAPAP 568
Score = 38.1 bits (87), Expect = 0.003
Identities = 24/55 (43%), Positives = 27/55 (48%), Gaps = 8/55 (14%)
Frame = +2
Query: 2 ATSSPPP---SSPTESIPSPPSAVPLPLSLP-----APPPPPTSSRRLPPPCWTP 48
A SSPPP S P S P P + P P+S P PPP P S+ PPP P
Sbjct: 275 AQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTPPPAPAST---PPPASPP 430
Score = 37.4 bits (85), Expect = 0.004
Identities = 21/46 (45%), Positives = 25/46 (53%)
Frame = +2
Query: 3 TSSPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPCWTP 48
T+SP P +PT P PP+A P + PPP SS PPP TP
Sbjct: 206 TTSPAPPTPTT--PQPPAAQSSPPPAQSSPPPVQSS---PPPASTP 328
Score = 35.8 bits (81), Expect = 0.012
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Frame = +2
Query: 2 ATSSPPPSSPTESIPSPPSAVPLPLSLPAP---------PPPPTSSRRLPPPCWTPEETS 52
A SSPPP+ +S P P + P P S P P PPP S P P TP S
Sbjct: 254 AQSSPPPA---QSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPAS 424
Score = 32.0 bits (71), Expect = 0.18
Identities = 18/42 (42%), Positives = 22/42 (51%), Gaps = 3/42 (7%)
Frame = +2
Query: 4 SSPPPSSPTESIPSPPSAVPLPLSLPAP---PPPPTSSRRLP 42
S+PPP+SP P PP+ P P + P P P P TS P
Sbjct: 404 STPPPASPPPFSP-PPATPPPPAATPPPALTPVPATSPAPAP 526
>BP058026
Length = 389
Score = 41.2 bits (95), Expect = 3e-04
Identities = 17/21 (80%), Positives = 18/21 (84%)
Frame = +3
Query: 361 INNNDNNIINNNGNNNNNNNN 381
INNN+NN NNN NNNNNNNN
Sbjct: 6 INNNNNNNNNNNNNNNNNNNN 68
Score = 40.8 bits (94), Expect = 4e-04
Identities = 17/23 (73%), Positives = 18/23 (77%)
Frame = +3
Query: 359 NTINNNDNNIINNNGNNNNNNNN 381
N NNN+NN NNN NNNNNNNN
Sbjct: 12 NNNNNNNNNNNNNNNNNNNNNNN 80
Score = 40.8 bits (94), Expect = 4e-04
Identities = 17/23 (73%), Positives = 18/23 (77%)
Frame = +3
Query: 359 NTINNNDNNIINNNGNNNNNNNN 381
N NNN+NN NNN NNNNNNNN
Sbjct: 15 NNNNNNNNNNNNNNNNNNNNNNN 83
Score = 40.8 bits (94), Expect = 4e-04
Identities = 17/23 (73%), Positives = 18/23 (77%)
Frame = +3
Query: 359 NTINNNDNNIINNNGNNNNNNNN 381
N NNN+NN NNN NNNNNNNN
Sbjct: 9 NNNNNNNNNNNNNNNNNNNNNNN 77
Score = 40.4 bits (93), Expect = 5e-04
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 355 LRKGNTINNNDNNIINNNGNNNNNNNNI 382
+ N NNN+NN NNN NNNNNNN++
Sbjct: 6 INNNNNNNNNNNNNNNNNNNNNNNNNDL 89
Score = 37.0 bits (84), Expect = 0.006
Identities = 16/24 (66%), Positives = 18/24 (74%)
Frame = +3
Query: 359 NTINNNDNNIINNNGNNNNNNNNI 382
N NNN+NN NNN NNNNNN+ I
Sbjct: 21 NNNNNNNNNNNNNNNNNNNNNDLI 92
Score = 33.1 bits (74), Expect = 0.081
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 368 IINNNGNNNNNNNN 381
IINNN NNNNNNNN
Sbjct: 3 IINNNNNNNNNNNN 44
>TC11863 weakly similar to UP|O22458 (O22458) Hydroxyproline-rich
glycoprotein gas28p precursor, partial (7%)
Length = 341
Score = 41.2 bits (95), Expect = 3e-04
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +3
Query: 4 SSPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPP 44
S PPP P E IP P + P+ PPPP S R+ PPP
Sbjct: 150 SDPPPPRPFEPIPIQPVSYPVKPKDTPSPPPPDSLRQPPPP 272
Score = 31.6 bits (70), Expect = 0.23
Identities = 22/51 (43%), Positives = 25/51 (48%), Gaps = 9/51 (17%)
Frame = +3
Query: 3 TSSPPPSSPTESIPSPPSA-VPLPL---SLP-----APPPPPTSSRRLPPP 44
TS SS +ES P PP P+P+ S P P PPP S R PPP
Sbjct: 117 TSHRSLSSSSESDPPPPRPFEPIPIQPVSYPVKPKDTPSPPPPDSLRQPPP 269
Score = 29.3 bits (64), Expect = 1.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 6 PPPSSPTESIP-SPPSAVPLPLSLPAPPPPPTSSRRLPPPCWTPEETSALIDSYRDKWYS 64
P PS+P++S P PS P LP P P + RR PE +A +D+ + YS
Sbjct: 166 PDPSNPSQSNPFHTPSNPKTPPLLPLPTPSASLRRRHSCSGEAPEPRAAGMDA---RGYS 336
Query: 65 L 65
L
Sbjct: 337 L 339
>TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate
dioxygenase (4HPPD) (HPD) (HPPDase) , partial (29%)
Length = 576
Score = 40.8 bits (94), Expect = 4e-04
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 2 ATSSPPPSSPTESIPSPPSAVPLPLSLP---APPPPPTSSRRLPPPCWTP 48
A+SSPP + P P PP P PLS P +P PPPT+S P P +P
Sbjct: 400 ASSSPPHTLPKSPSPPPP---PSPLSPPPPASPSPPPTASPSAPSPSKSP 540
Score = 35.0 bits (79), Expect = 0.021
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 3 TSSPPPSSP--TESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPCWTPEETSA 53
T +PP SS T + SPP +P P+PPPPP+ PP +P T++
Sbjct: 361 TLTPPTSSAPATSASSSPPHTLP---KSPSPPPPPSPLSPPPPASPSPPPTAS 510
Score = 34.7 bits (78), Expect = 0.028
Identities = 21/47 (44%), Positives = 24/47 (50%), Gaps = 3/47 (6%)
Frame = +1
Query: 4 SSPPPSSPTESIPSPPSAVPLPLSLPAPPPP---PTSSRRLPPPCWT 47
S PPP SP S P P S P P + P+ P P PT S+ PP T
Sbjct: 439 SPPPPPSPL-SPPPPASPSPPPTASPSAPSPSKSPTPSKPSPPQSTT 576
>TC14145 similar to UP|Q7XXS4 (Q7XXS4) Thiamine biosynthetic enzyme, partial
(83%)
Length = 1372
Score = 40.8 bits (94), Expect = 4e-04
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 5 SPPPSSPTESIPSPPSAV-PLPLSLPAPPP--PPTSSRRLPPPC 45
SPPPS PT++ SPPS P P PAPPP PP + + P PC
Sbjct: 144 SPPPSFPTQNPHSPPSMENPSP---PAPPPSNPPPNKTQPPSPC 266
Score = 28.9 bits (63), Expect = 1.5
Identities = 17/46 (36%), Positives = 20/46 (42%)
Frame = +3
Query: 2 ATSSPPPSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPCWT 47
A P +PT S + PSA P SL AP S PP W+
Sbjct: 402 ALDPPASHAPTSSARTLPSASPSLSSLSAPAAARGSVASSSPPWWS 539
>BP038942
Length = 617
Score = 40.4 bits (93), Expect = 5e-04
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 3 TSSPPPSSPTESIPSPP-SAVPLPLSLPAPPPPPTS-SRRLPPPCWTPEETSAL 54
T PPP SP PS P S +P+PL+ P P PPTS L PP TP S L
Sbjct: 310 TPPPPPLSPPSLSPSNPVSVLPVPLATPLSPSPPTSLFPFLQPP--TPSRLSRL 465
Score = 28.5 bits (62), Expect = 2.0
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 17 SPPSAVPL-PLSLPAPPPPPTSSRRLPP 43
SPP++ P+ P S PPPPP S L P
Sbjct: 268 SPPTSQPVHPSSSLTPPPPPLSPPSLSP 351
Score = 27.3 bits (59), Expect = 4.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 8 PSSPTESIPSPPSAVPLPLSLPAPPPPPTSSRRLPPPC 45
P S + PS S P PPPPPT + PP C
Sbjct: 153 PKS*QQKYPSLYSTTPSSPPSKQPPPPPTLN---PPSC 257
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.310 0.129 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,819,397
Number of Sequences: 28460
Number of extensions: 202539
Number of successful extensions: 11563
Number of sequences better than 10.0: 1193
Number of HSP's better than 10.0 without gapping: 4475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8479
length of query: 388
length of database: 4,897,600
effective HSP length: 92
effective length of query: 296
effective length of database: 2,279,280
effective search space: 674666880
effective search space used: 674666880
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 56 (26.2 bits)
Medicago: description of AC149129.9