TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149079.7 + phase: 0 
         (190 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC14809                                                               150  1e-37

>TC14809 
          Length = 584

 Score =  150 bits (379), Expect = 1e-37
 Identities = 86/119 (72%), Positives = 91/119 (76%)
 Frame = +3

Query: 71  *GGLLDLHPQLNYL*RLLSLQQLHKILYLLMTIL*LW*QSKISKDTTQVVNQIPRQEKYG 130
           *GGLLDL  Q  Y  RLL LQ LH+ L  LMT L*LW*Q+ I KDTTQ VNQ P Q KYG
Sbjct: 6   *GGLLDLLLQPIYSLRLLRLQPLHESL*HLMTAL*LW*QNMILKDTTQAVNQEPCQVKYG 185

Query: 131 QI*VLFTVCELLDRQHWLEYHAFGCDMVPTRRYLREN*AWKTVAQSELITWEKLMLISM 189
           QI*VLFTV  LLDRQHW EY AFGCD V TRR+LR  *A K VAQSELITWE+L+LISM
Sbjct: 186 QI*VLFTVYVLLDRQHWQEYRAFGCDTVLTRRFLRRT*AGKAVAQSELITWEQLVLISM 362


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.353    0.154    0.539 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,327,481
Number of Sequences: 28460
Number of extensions: 42328
Number of successful extensions: 391
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of query: 190
length of database: 4,897,600
effective HSP length: 85
effective length of query: 105
effective length of database: 2,478,500
effective search space: 260242500
effective search space used: 260242500
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 52 (24.6 bits)