BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149050.4 + phase: 2 /partial
(1548 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC10403 similar to UP|O80815 (O80815) T8F5.22 protein, partial (... 628 e-180
TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein... 55 6e-08
TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-bindi... 52 5e-07
TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding p... 51 2e-06
TC16065 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich... 48 1e-05
TC14184 similar to UP|Q93WZ6 (Q93WZ6) Abscisic stress ripening-l... 47 3e-05
CN825556 45 9e-05
TC17113 weakly similar to UP|Q9LFU8 (Q9LFU8) Proline-rich protei... 45 1e-04
TC20112 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich... 44 2e-04
TC10343 similar to UP|Q9SZZ1 (Q9SZZ1) Fibrillarin-like protein (... 44 3e-04
BP034485 43 4e-04
BP030058 43 4e-04
TC18216 similar to GB|CAA28991.1|34041|HSKER65A keratin type II ... 43 4e-04
TC15253 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-pro... 42 6e-04
TC19911 weakly similar to PIR|A44805|A44805 eggshell protein pre... 42 0.001
TC7897 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-li... 41 0.001
TC8694 similar to UP|IF38_MEDTR (Q9XHM1) Eukaryotic translation ... 41 0.002
TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%) 40 0.002
AU251550 40 0.003
AV776603 40 0.004
>TC10403 similar to UP|O80815 (O80815) T8F5.22 protein, partial (15%)
Length = 1392
Score = 628 bits (1620), Expect = e-180
Identities = 315/402 (78%), Positives = 340/402 (84%), Gaps = 15/402 (3%)
Frame = +3
Query: 1162 PRFQNITADEAMEFLSDKDPGESIFRPSSRGPSYLTLTLKIHEGVYAHKDLVEGGKEHKD 1221
PRFQN TADEAMEFLSDKDPGESI RPSSRGPSYLTLTLKIH+GVYAHKD+VEGGKEHKD
Sbjct: 15 PRFQNSTADEAMEFLSDKDPGESIIRPSSRGPSYLTLTLKIHDGVYAHKDIVEGGKEHKD 194
Query: 1222 ITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVTHLKTMLNYRKFRTGTKTEVDELLKME 1281
ITSLL++GKTLKIG+DTFEDLDEVMDRYVDPLVTHLK MLNYRKFR G+K EVDELL+ME
Sbjct: 195 ITSLLKMGKTLKIGDDTFEDLDEVMDRYVDPLVTHLKAMLNYRKFRKGSKAEVDELLRME 374
Query: 1282 KAECPMRIVYTFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAY 1341
KAE PMRIVY FGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAY
Sbjct: 375 KAEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAY 554
Query: 1342 FQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASVGSGWGGSNGDGGWRGHLNDRDR 1401
FQRHIDDP +DSAPSIRSVAAMVPMRSPA GGSS ASVGSGWGGSN +GGW+G+ DRDR
Sbjct: 555 FQRHIDDPLHDSAPSIRSVAAMVPMRSPAAGGSSGASVGSGWGGSNSEGGWKGYSYDRDR 734
Query: 1402 SSTPGSRTGR------------PSGVPRPYGGGRGRGRGSYNN-RGHN--NERQDGASGW 1446
SSTPGSRTGR PSGVPRPYGG RGRGRGSY++ RGHN NERQD SG+
Sbjct: 735 SSTPGSRTGRADYRNNGNRDEHPSGVPRPYGG-RGRGRGSYSSSRGHNSNNERQD--SGY 905
Query: 1447 GSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWGGGSGWGGGASTGDKSGWGGGAN 1506
G+G A+KD +D LSNFPGAKVQNSPGREAFPGGWGG G SGWGGGA+
Sbjct: 906 GAGRWGPASKDGNDGLSNFPGAKVQNSPGREAFPGGWGGSDGG---------SGWGGGAS 1058
Query: 1507 TGDKSGWGGGNGWGGGASTGAEHGNSGWGSGSKKAADIGWSG 1548
TGD GWG G+G G A+ G+SGWG+G+KKA + GW+G
Sbjct: 1059 TGDNGGWGQGSG---GDQNDAQEGSSGWGTGTKKAGEDGWTG 1175
>TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein 2, partial
(66%)
Length = 481
Score = 55.5 bits (132), Expect = 6e-08
Identities = 26/59 (44%), Positives = 31/59 (52%)
Frame = +3
Query: 1475 GREAFPGGWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSG 1533
G + GG GG G+GGG G G+GGG G G+GGG G+GGG G G G
Sbjct: 306 GGGGYGGGGYGGGGYGGGGRGG--GGYGGGGGYGGSGGYGGGGGYGGGGRGGGRGGGGG 476
Score = 50.8 bits (120), Expect = 2e-06
Identities = 30/79 (37%), Positives = 36/79 (44%)
Frame = +3
Query: 1467 GAKVQNSPGREAFPGGWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTG 1526
G VQ + GG GG G+GGG G G+GGG G G+GGG G+GG G
Sbjct: 252 GQAVQGTRRGGGAGGGGRGGGGYGGGGYGG--GGYGGGGRGG--GGYGGGGGYGGSGGYG 419
Query: 1527 AEHGNSGWGSGSKKAADIG 1545
G G G G + G
Sbjct: 420 GGGGYGGGGRGGGRGGGGG 476
Score = 50.4 bits (119), Expect = 2e-06
Identities = 32/96 (33%), Positives = 38/96 (39%)
Frame = +3
Query: 1421 GGRGRGRGSYNNRGHNNERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFP 1480
GG GRG G Y G+ G G+G G GR
Sbjct: 291 GGGGRGGGGYGGGGY------GGGGYGGG-------------------------GRGG-- 371
Query: 1481 GGWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGG 1516
GG+GGG G+GG G G+GGG G + G GGG
Sbjct: 372 GGYGGGGGYGGSGGYGGGGGYGGGGRGGGRGGGGGG 479
Score = 48.9 bits (115), Expect = 6e-06
Identities = 27/68 (39%), Positives = 31/68 (44%)
Frame = +3
Query: 1481 GGWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSGWGSGSKK 1540
GG GG G GGG G G+GGG G G GG G GG +G G G+G G +
Sbjct: 279 GGGAGGGGRGGGGYGG--GGYGGGGYGGGGRGGGGYGGGGGYGGSGGYGGGGGYGGGGRG 452
Query: 1541 AADIGWSG 1548
G G
Sbjct: 453 GGRGGGGG 476
Score = 38.9 bits (89), Expect = 0.006
Identities = 21/62 (33%), Positives = 27/62 (42%)
Frame = +3
Query: 1487 SGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSGWGSGSKKAADIGW 1546
+G G A G + G G G G+GGG +GGG G G G+G G G+
Sbjct: 240 TGPNGQAVQGTRRGGGAGGGGRGGGGYGGGG-YGGGGYGGGGRGGGGYGGGGGYGGSGGY 416
Query: 1547 SG 1548
G
Sbjct: 417 GG 422
Score = 28.9 bits (63), Expect = 6.5
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = +3
Query: 1372 GGSSAASVGSGWGGSNGDGGWRGHLNDRDRSSTPGSRTGRPSGVPRPYGGGRGRGRG 1428
GG G G GG G GG+ G +G G GGGRG GRG
Sbjct: 336 GGGGYGGGGRGGGGYGGGGGYGG--------------SGGYGGGGGYGGGGRGGGRG 464
>TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic
acid-inducible protein, complete
Length = 972
Score = 52.4 bits (124), Expect = 5e-07
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +2
Query: 1437 NERQDGAS---GWGSGWGSAATKDKDDSLS--NFPGAKVQNSPGREAFPGGWGGGSGWGG 1491
N+R+ G S G+ + + KD + ++ + G V + + GG GGG G+GG
Sbjct: 455 NDRETGRSRGFGFVTFASEQSMKDAIEGMNGQDIDGRNVTVNEAQARGRGGGGGGGGYGG 634
Query: 1492 GASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSGWGSGSKK 1540
G G G+GGG + G GGG G GG G G G G +
Sbjct: 635 GRREG---GYGGGGGSRYSGGGGGGYGGSGGGGYGGRREGGGGGYGGSR 772
Score = 42.7 bits (99), Expect = 4e-04
Identities = 31/101 (30%), Positives = 39/101 (37%)
Frame = +2
Query: 1423 RGRGRGSYNNRGHNNERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGG 1482
RGRG G G+ R++G G+G G GS + GG
Sbjct: 593 RGRGGGG-GGGGYGGGRREG--GYGGGGGSR-------------------------YSGG 688
Query: 1483 WGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGA 1523
GGG G GG G + GGG G + G GG GG+
Sbjct: 689 GGGGYGGSGGGGYGGRREGGGGGYGGSREGGGGSRYSSGGS 811
Score = 36.2 bits (82), Expect = 0.041
Identities = 21/66 (31%), Positives = 26/66 (38%)
Frame = +2
Query: 1382 GWGGSNGDGGWRGHLNDRDRSSTPGSRTGRPSGVPRPYGGGRGRGRGSYNNRGHNNERQD 1441
G GG G GG+ G + GSR Y GG G G G G+ R+
Sbjct: 596 GRGGGGGGGGYGGGRREGGYGGGGGSR----------YSGGGGGGYGGSGGGGYGGRREG 745
Query: 1442 GASGWG 1447
G G+G
Sbjct: 746 GGGGYG 763
Score = 32.0 bits (71), Expect = 0.77
Identities = 24/94 (25%), Positives = 29/94 (30%)
Frame = +2
Query: 1420 GGGRGRGRGSYNNRGHNNERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAF 1479
G G GR G Y G + G G+G G
Sbjct: 623 GYGGGRREGGYGGGGGSRYSGGGGGGYGGSGG---------------------------- 718
Query: 1480 PGGWGGGSGWGGGASTGDKSGWGGGANTGDKSGW 1513
GG+GG GGG G + G GGG+ W
Sbjct: 719 -GGYGGRREGGGGGYGGSREG-GGGSRYSSGGSW 814
>TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding protein 2,
partial (93%)
Length = 725
Score = 50.8 bits (120), Expect = 2e-06
Identities = 41/125 (32%), Positives = 53/125 (41%), Gaps = 13/125 (10%)
Frame = +1
Query: 1437 NERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGR-------EAFPGGWGGG--- 1486
N+R+ G S G+G ++ S G GR +A GG GGG
Sbjct: 181 NDRETGRS---RGFGFVTFTSEEAMRSAIEGMNGNELDGRNITVNEAQARGGGGGGGGRG 351
Query: 1487 -SGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGA--EHGNSGWGSGSKKAAD 1543
G+GGG + G+GGG + G GGG G GGG G E G G G GS+ +
Sbjct: 352 GGGYGGGGGRRE-GGYGGGGGSRGYGGGGGGYGGGGGGGYGGRREGGYGGDGGGSRYGSG 528
Query: 1544 IGWSG 1548
G G
Sbjct: 529 GGGGG 543
Score = 50.4 bits (119), Expect = 2e-06
Identities = 35/105 (33%), Positives = 39/105 (36%)
Frame = +1
Query: 1420 GGGRGRGRGSYNNRGHNNERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAF 1479
GGG GRG G Y G E G+G G GS +
Sbjct: 331 GGGGGRGGGGYGGGGGRRE-----GGYGGGGGS------------------------RGY 423
Query: 1480 PGGWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGAS 1524
GG GG G GGG G + G GG G + G GGG G G S
Sbjct: 424 GGGGGGYGGGGGGGYGGRREGGYGGDGGGSRYGSGGGGGGGNWRS 558
Score = 40.0 bits (92), Expect = 0.003
Identities = 27/81 (33%), Positives = 34/81 (41%)
Frame = +1
Query: 1371 TGGSSAASVGSGWGGSNGDGGWRGHLNDRDRSSTPGSRTGRPSGVPRPYGGGRGRGRGSY 1430
T + A G G GG G GG+ G R+ G + G YGGG G G G
Sbjct: 298 TVNEAQARGGGGGGGGRGGGGYGGGGGRREGGYGGGGGSRGYGGGGGGYGGGGGGGYGGR 477
Query: 1431 NNRGHNNERQDGASGWGSGWG 1451
G+ + G S +GSG G
Sbjct: 478 REGGYGGD--GGGSRYGSGGG 534
>TC16065 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich glycoprotein
DZ-HRGP precursor, partial (20%)
Length = 608
Score = 47.8 bits (112), Expect = 1e-05
Identities = 46/160 (28%), Positives = 58/160 (35%), Gaps = 6/160 (3%)
Frame = -1
Query: 1384 GGSNGDGGWRGHLNDRDRSSTPGSRTGRPSGVPRPYGGGRGRGRGSYNNRGHNNERQDG- 1442
G S G+G H + +RS+ P + G G G G RG+ Q G
Sbjct: 461 GPSGGEGSEGQHSHSTERSAPPPQQAAAAPG---------GGGPGPQGGRGYGGPPQGGR 309
Query: 1443 ASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWGGGSGWG----GGASTGDK 1498
G+G G G PG + GG GG G GG
Sbjct: 308 GGGYGGGGG----------------------PG---YGGGGRGGHGVPQQQYGGPPEYQG 204
Query: 1499 SGWGGGANTGDKSGW-GGGNGWGGGASTGAEHGNSGWGSG 1537
G GG + G + G+ GGG G+GGG G G GSG
Sbjct: 203 RGRGGPSQQGGRGGYSGGGGGYGGGGG----RGGGGMGSG 96
Score = 40.4 bits (93), Expect = 0.002
Identities = 38/117 (32%), Positives = 47/117 (39%), Gaps = 7/117 (5%)
Frame = -1
Query: 1439 RQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWG--GGSGWGGGASTG 1496
R DG SG G GS S P + +PG GG G GG G+GG G
Sbjct: 470 RTDGPSG---GEGSEGQHSHSTERSAPPPQQAAAAPGG----GGPGPQGGRGYGGPPQGG 312
Query: 1497 DKSGWGGGANTGDKSGWGGGNGWGGGA-----STGAEHGNSGWGSGSKKAADIGWSG 1548
G+GGG G +GGG G G E+ G G S++ G+SG
Sbjct: 311 RGGGYGGGGGPG----YGGGGRGGHGVPQQQYGGPPEYQGRGRGGPSQQGGRGGYSG 153
>TC14184 similar to UP|Q93WZ6 (Q93WZ6) Abscisic stress ripening-like protein,
partial (57%)
Length = 1141
Score = 46.6 bits (109), Expect = 3e-05
Identities = 46/155 (29%), Positives = 64/155 (40%), Gaps = 10/155 (6%)
Frame = +3
Query: 1387 NGDGGWRGHLNDRDRSSTPGSRTGRPS-GVPRPYGGGRGRG--RGSYNNRGHNNERQDGA 1443
N D G H + DR + + + S P GG G + SY G
Sbjct: 93 NRDRGLFHHHKNEDRPTDTETGYNKTSYSTDEPSGGDYDSGYKKSSYETSG--------- 245
Query: 1444 SGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAF----PGGWGGGSGW-GGGASTGDK 1498
G+ +G+ ++ D+ N G + + A+ P G G G+G GGG STG
Sbjct: 246 GGYETGYNKTSSYSTDEP--NSGGGGYDSGYNKTAYSTDEPSGGGYGTGGAGGGYSTGGG 419
Query: 1499 SGWGGGANTGDKSGWGGGNGW--GGGASTGAEHGN 1531
G GGG G+ S GGG G+ GGG + GN
Sbjct: 420 YGTGGGGG-GEYSTGGGGGGYSTGGGGYGNDDSGN 521
Score = 34.7 bits (78), Expect = 0.12
Identities = 28/129 (21%), Positives = 55/129 (41%), Gaps = 5/129 (3%)
Frame = +3
Query: 1425 RGRGSYNNRGHNNERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWG 1484
R RG + H+++ +D + +G+ + + S ++ ++S E GG+
Sbjct: 96 RDRGLF----HHHKNEDRPTDTETGYNKTSYSTDEPSGGDYDSGYKKSS--YETSGGGYE 257
Query: 1485 GGSGWGGGASTGDKSGWGGGANTG-DKSGWG----GGNGWGGGASTGAEHGNSGWGSGSK 1539
G ST + + GGG ++G +K+ + G G+G G + G G+G+G
Sbjct: 258 TGYNKTSSYSTDEPNSGGGGYDSGYNKTAYSTDEPSGGGYGTGGAGGGYSTGGGYGTGGG 437
Query: 1540 KAADIGWSG 1548
+ G
Sbjct: 438 GGGEYSTGG 464
Score = 29.3 bits (64), Expect = 5.0
Identities = 23/75 (30%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Frame = +3
Query: 1369 PATGGSSAASVGSGW--GGSNGDGGWRGHLNDRDRSSTPGSRTGRPSGVPRPYGGGRGRG 1426
P+ GG G G+ GG G GG G ST G GGG G
Sbjct: 360 PSGGGYGTGGAGGGYSTGGGYGTGGGGG-----GEYSTGGG------------GGGYSTG 488
Query: 1427 RGSYNNRGHNNERQD 1441
G Y N N R +
Sbjct: 489 GGGYGNDDSGNRRDE 533
>CN825556
Length = 655
Score = 45.1 bits (105), Expect = 9e-05
Identities = 30/65 (46%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -3
Query: 1467 GAKVQNSPGREAFPG---GWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGA 1523
G+ + GR+A G GWG G GWG G G G G G G S GGG G GGG
Sbjct: 602 GSGASSG*GRDAGGGTGWGWGWGWGWG*GWG*GWG*GCGCGCGCGCGSEGGGGTGCGGG- 426
Query: 1524 STGAE 1528
STGA+
Sbjct: 425 STGAK 411
Score = 43.5 bits (101), Expect = 3e-04
Identities = 30/69 (43%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 1481 GGWGGGS-GWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSGWGSGSK 1539
GG+ GS G G GAS+G GGG G GWG G GWG G G G G G GS+
Sbjct: 632 GGFCSGSPGEGSGASSG*GRDAGGGTGWGWGWGWGWG*GWG*GWG*GCGCG-CGCGCGSE 456
Query: 1540 KAADIGWSG 1548
G G
Sbjct: 455 GGGGTGCGG 429
Score = 34.3 bits (77), Expect = 0.15
Identities = 34/98 (34%), Positives = 38/98 (38%)
Frame = -3
Query: 1402 SSTPGSRTGRPSGVPRPYGGGRGRGRGSYNNRGHNNERQDGASGWGSGWGSAATKDKDDS 1461
S +PG +G SG R GGG G G G G GWG GWG
Sbjct: 620 SGSPGEGSGASSG*GRDAGGGTGWGWGWGWGWG*---------GWG*GWG*GC------- 489
Query: 1462 LSNFPGAKVQNSPGREAFPGGWGGGSGWGGGASTGDKS 1499
G G E GGG+G GGG STG K+
Sbjct: 488 -----GCGCGCGCGSEG-----GGGTGCGGG-STGAKA 408
>TC17113 weakly similar to UP|Q9LFU8 (Q9LFU8) Proline-rich protein, partial
(25%)
Length = 1077
Score = 44.7 bits (104), Expect = 1e-04
Identities = 39/107 (36%), Positives = 43/107 (39%), Gaps = 5/107 (4%)
Frame = -2
Query: 1434 GHNNERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWGG----GSGW 1489
G NN + G +G G G G K G K G GGW G G G
Sbjct: 806 GGNNGGKGGKNGGGGGGGGGGVKPGITI-----GGKGNKGEGGCFDGGGWNGLGINGGGL 642
Query: 1490 GGGASTGDKSGWG-GGANTGDKSGWGGGNGWGGGASTGAEHGNSGWG 1535
GGG + SG G GG N KSG GG GW G +G G G G
Sbjct: 641 GGG*NGLGISGGGLGG*NGLGKSG-GGLGGWNGSGKSGGGLG*KGLG 504
Score = 38.1 bits (87), Expect = 0.011
Identities = 31/94 (32%), Positives = 35/94 (36%), Gaps = 7/94 (7%)
Frame = -2
Query: 1462 LSNFPGAKVQNSPGREAFPGGWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGG----GN 1517
+ PG G + GG GGG G G + G K G G D GW G G
Sbjct: 824 IGGLPGGGNNGGKGGKNGGGGGGGGGGVKPGITIGGKGNKGEG-GCFDGGGWNGLGINGG 648
Query: 1518 GWGGG-ASTGAEHGNSGW--GSGSKKAADIGWSG 1548
G GGG G G G G G GW+G
Sbjct: 647 GLGGG*NGLGISGGGLGG*NGLGKSGGGLGGWNG 546
>TC20112 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich glycoprotein
DZ-HRGP precursor, partial (11%)
Length = 523
Score = 43.9 bits (102), Expect = 2e-04
Identities = 27/74 (36%), Positives = 33/74 (44%)
Frame = +2
Query: 1466 PGAKVQNSPGREAFPGGWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGAST 1525
P A +P GG+ G G G G GD+ +TG SG GGG G GGG+
Sbjct: 299 PAAHANPNPPFVPPSGGFSVGRGGGFGGRGGDRK-----YDTGRYSGGGGGRGRGGGSIR 463
Query: 1526 GAEHGNSGWGSGSK 1539
G G G G G +
Sbjct: 464 GGGRGGRGGGFGGR 505
Score = 40.4 bits (93), Expect = 0.002
Identities = 27/62 (43%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 1474 PGREAFPGGWGGGSGWGGGA---STGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHG 1530
P F G GGG G GG TG SG GGG G S GGG G GG G G
Sbjct: 335 PPSGGFSVGRGGGFGGRGGDRKYDTGRYSGGGGGRGRGGGSIRGGGRGGRGGGFGGRHGG 514
Query: 1531 NS 1532
S
Sbjct: 515 GS 520
Score = 35.4 bits (80), Expect = 0.070
Identities = 36/105 (34%), Positives = 40/105 (37%)
Frame = +2
Query: 1349 PQNDSAPSIRSVAAMVPMRSPATGGSSAASVGSGWGGSNGDGGWRGHLNDRDRSSTPGSR 1408
P PS AA P S SVG G GG G GG R +
Sbjct: 266 PYAAPVPSGFGPAAHANPNPPFVPPSGGFSVGRG-GGFGGRGGDRKY------------D 406
Query: 1409 TGRPSGVPRPYGGGRGRGRGSYNNRGHNNERQDGASGWGSGWGSA 1453
TGR SG GG GRGRG + RG + G G G GS+
Sbjct: 407 TGRYSG------GGGGRGRGGGSIRGGGRGGRGGGFGGRHGGGSS 523
>TC10343 similar to UP|Q9SZZ1 (Q9SZZ1) Fibrillarin-like protein (Fibrillarin
2) (AtFib2), partial (85%)
Length = 1116
Score = 43.5 bits (101), Expect = 3e-04
Identities = 29/64 (45%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 1480 PGGWGGGSGWGG----GASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSGWG 1535
P G GGG G+ G G GD G GGG T K+ GGG G GGG G G G G
Sbjct: 43 PRGRGGGGGFRGRGDRGRGRGDGGGRGGGRGTPFKAR-GGGRG-GGGGRGGRGGGRGGRG 216
Query: 1536 SGSK 1539
G K
Sbjct: 217 GGMK 228
Score = 39.3 bits (90), Expect = 0.005
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = +1
Query: 1482 GWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTG 1526
G G G G GGG T K+ GG G + G GGG G GG G
Sbjct: 97 GRGDGGGRGGGRGTPFKARGGGRGGGGGRGGRGGGRGGRGGGMKG 231
Score = 36.6 bits (83), Expect = 0.031
Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 1385 GSNGDGGWRGHLNDRDRSSTPGSRTGRPSGVP-RPYGGGRGRGRGSYNNRGHNNERQDGA 1443
G G GG+RG DR R G G G P + GGGRG G G G R G
Sbjct: 49 GRGGGGGFRGR-GDRGRGRGDGGGRGGGRGTPFKARGGGRGGGGGRGGRGGGRGGRGGGM 225
Query: 1444 SG 1445
G
Sbjct: 226 KG 231
Score = 30.0 bits (66), Expect = 2.9
Identities = 29/89 (32%), Positives = 29/89 (32%), Gaps = 8/89 (8%)
Frame = +1
Query: 1416 PRPYGGG--------RGRGRGSYNNRGHNNERQDGASGWGSGWGSAATKDKDDSLSNFPG 1467
PR GGG RGRGRG RG A G G G G
Sbjct: 43 PRGRGGGGGFRGRGDRGRGRGDGGGRGGGRGTPFKARGGGRGGGG--------------- 177
Query: 1468 AKVQNSPGREAFPGGWGGGSGWGGGASTG 1496
GR GG GGG G GG G
Sbjct: 178 -------GR----GGRGGGRGGRGGGMKG 231
>BP034485
Length = 485
Score = 42.7 bits (99), Expect = 4e-04
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
Frame = +3
Query: 1445 GWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWGGGS-----------GWGGGA 1493
G G G G A K+K+ + +N G N+ G+E GG GGG
Sbjct: 147 GGGGGGGETANKNKNKNKNNGGG----NNKGKEGKKGGGGGGKLDKIDFDFQDFDIPSHG 314
Query: 1494 STGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEH 1529
+G K G GGG G+K+G G+G GG + H
Sbjct: 315 KSGGKGGGGGGK--GNKNGHDHGHGIGGNMNGNGGH 416
Score = 37.7 bits (86), Expect = 0.014
Identities = 36/125 (28%), Positives = 49/125 (38%), Gaps = 16/125 (12%)
Frame = +3
Query: 1437 NERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQN-SPGREAFPGGWGGGSGWGGGAST 1495
N+ ++G G G S++ K K N G V+ G+++ GG GGG
Sbjct: 12 NKSKEGKQKGGGGGDSSSDKKKKTKDKNGGGFLVKFLGLGKKSKKGGGGGGGETANKNKN 191
Query: 1496 GDKSGWGGGANTGDKSGWGGGNGW---------------GGGASTGAEHGNSGWGSGSKK 1540
+K+ GGG N G + GGG G G S G G G G G+K
Sbjct: 192 KNKNN-GGGNNKGKEGKKGGGGGGKLDKIDFDFQDFDIPSHGKSGG--KGGGGGGKGNKN 362
Query: 1541 AADIG 1545
D G
Sbjct: 363 GHDHG 377
>BP030058
Length = 455
Score = 42.7 bits (99), Expect = 4e-04
Identities = 23/48 (47%), Positives = 25/48 (51%)
Frame = +1
Query: 1475 GREAFPGGWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGG 1522
G+E + GG G G G GGG GGG G SG GGG G GGG
Sbjct: 280 GQEGYFGGGGEGGGGGGGDG-------GGGGGDGHGSGGGGGEGDGGG 402
Score = 42.7 bits (99), Expect = 4e-04
Identities = 22/43 (51%), Positives = 24/43 (55%)
Frame = +1
Query: 1482 GWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGAS 1524
G+ GG G GGG GD G GGG G G G G+G GGG S
Sbjct: 289 GYFGGGGEGGGGGGGD-GGGGGGDGHGSGGGGGEGDGGGGGGS 414
Score = 38.9 bits (89), Expect = 0.006
Identities = 28/79 (35%), Positives = 35/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 1474 PGREAFPGGWG-------GGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTG 1526
PG GG G G G+ GG G + G GGG + G G G G+G GGG
Sbjct: 226 PGTYMILGGGGDKGLQFCGQEGYFGG---GGEGGGGGGGDGGGGGGDGHGSGGGGG---- 384
Query: 1527 AEHGNSGWGSGSKKAADIG 1545
G+ G G GS + + G
Sbjct: 385 --EGDGGGGGGSPQVSPQG 435
Score = 32.3 bits (72), Expect = 0.59
Identities = 20/53 (37%), Positives = 23/53 (42%), Gaps = 6/53 (11%)
Frame = +1
Query: 1502 GGGANTG----DKSGW--GGGNGWGGGASTGAEHGNSGWGSGSKKAADIGWSG 1548
GGG + G + G+ GGG G GGG G G G GSG G G
Sbjct: 247 GGGGDKGLQFCGQEGYFGGGGEGGGGGGGDGGGGGGDGHGSGGGGGEGDGGGG 405
>TC18216 similar to GB|CAA28991.1|34041|HSKER65A keratin type II (AA1-215)
{Homo sapiens;} , partial (16%)
Length = 501
Score = 42.7 bits (99), Expect = 4e-04
Identities = 25/62 (40%), Positives = 33/62 (52%), Gaps = 3/62 (4%)
Frame = +2
Query: 1481 GGWGGGSGWGGG---ASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSGWGSG 1537
GG+GG + GGG A+ G+GGG +G GG G GGG + G+ G+G G
Sbjct: 20 GGFGGAASTGGGFGAAAAPTSGGFGGGFGAVPSAGGFGGAGSGGGFGAFSNPGSGGFG-G 196
Query: 1538 SK 1539
SK
Sbjct: 197 SK 202
Score = 31.2 bits (69), Expect = 1.3
Identities = 22/74 (29%), Positives = 30/74 (39%)
Frame = +2
Query: 1442 GASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWGGGSGWGGGASTGDKSGW 1501
GA+ G G+G+AA +P F GG+G GG G G+
Sbjct: 32 GAASTGGGFGAAA------------------APTSGGFGGGFGAVPSAGGFGGAGSGGGF 157
Query: 1502 GGGANTGDKSGWGG 1515
G +N G G+GG
Sbjct: 158 GAFSNPG-SGGFGG 196
>TC15253 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-protein (ATAGP4)
(AT5G10430/F12B17_220), partial (42%)
Length = 575
Score = 42.4 bits (98), Expect = 6e-04
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -1
Query: 1483 WGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGA--STGAEHGNSGWGS 1536
WGG G G G TG SGW G W GG G GG+ S+G G+ W S
Sbjct: 374 WGGWRGSGRGGCTGGGSGWSG--------SWRGGGGSRGGSWWSSGGSRGSCWWWS 231
Score = 40.0 bits (92), Expect = 0.003
Identities = 26/70 (37%), Positives = 28/70 (39%), Gaps = 3/70 (4%)
Frame = -1
Query: 1481 GGWG---GGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSGWGSG 1537
G W G WGG G G G TG SGW G W GG G G S W SG
Sbjct: 407 GAWA*CWAGWDWGGW------RGSGRGGCTGGGSGWSG--SWRGG---GGSRGGSWWSSG 261
Query: 1538 SKKAADIGWS 1547
+ + WS
Sbjct: 260 GSRGSCWWWS 231
Score = 36.6 bits (83), Expect = 0.031
Identities = 32/105 (30%), Positives = 40/105 (37%), Gaps = 8/105 (7%)
Frame = -2
Query: 1449 GWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWGGG--SGWGGGASTGDKSGWGGGA- 1505
GW S + +S G PG +A P G G G G GA G+ G G G
Sbjct: 478 GWLSENAAEGGGGVSALFGPGPAAGPGPDAGPDGIGAGGEEAEGVGAPVGEAVGVGAGGE 299
Query: 1506 --NTGDKSGW---GGGNGWGGGASTGAEHGNSGWGSGSKKAADIG 1545
G +G G G GGG + G +G G G A +G
Sbjct: 298 AEGAGVAAGGVVVGAGVAAGGGVAGGGAGAAAGGGGGVVVGACVG 164
>TC19911 weakly similar to PIR|A44805|A44805 eggshell protein precursor -
fluke (Schistosoma haematobium) {Schistosoma
haematobium;} , partial (24%)
Length = 350
Score = 41.6 bits (96), Expect = 0.001
Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Frame = +1
Query: 1435 HNNERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWG----GGSGWG 1490
H E G +G SG GS + N G + + G GG+ G G
Sbjct: 4 HQFENSAGNTGH-SGGGSHGNDHRHSD--NEHGGRRSETTGHGLSGGGYDDDNRSGGRTG 174
Query: 1491 GGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSGWGSGSKKAADIG 1545
GG G S GG + G +SG GGG G+G G G G+ G+G G + G
Sbjct: 175 GGYGDGGHSA-GGYGDHGGRSG-GGGGGYGDG---GLSSGSGGYGDGGRSGVGYG 324
Score = 40.4 bits (93), Expect = 0.002
Identities = 34/114 (29%), Positives = 47/114 (40%), Gaps = 2/114 (1%)
Frame = +1
Query: 1426 GRGSY-NNRGHNNERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWG 1484
G GS+ N+ H++ G +G G + DD+ S GR GG+G
Sbjct: 43 GGGSHGNDHRHSDNEHGGRRSETTGHGLSGGGYDDDNRSG----------GRTG--GGYG 186
Query: 1485 GGSGWGGG-ASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSGWGSG 1537
G GG G +SG GGG GD G G+G G +G +G+ G
Sbjct: 187 DGGHSAGGYGDHGGRSG-GGGGGYGDGGLSSGSGGYGDGGRSGVGYGDGXLSGG 345
Score = 28.9 bits (63), Expect = 6.5
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 23/99 (23%)
Frame = +1
Query: 1374 SSAASVGSGWGGSNGD---------GGWRGHLNDR-------DRSSTPGSRTG------- 1410
+SA + G GGS+G+ GG R D + G RTG
Sbjct: 16 NSAGNTGHSGGGSHGNDHRHSDNEHGGRRSETTGHGLSGGGYDDDNRSGGRTGGGYGDGG 195
Query: 1411 RPSGVPRPYGGGRGRGRGSYNNRGHNNERQDGASGWGSG 1449
+G +GG G G G Y + G ++ G+ G+G G
Sbjct: 196 HSAGGYGDHGGRSGGGGGGYGDGGLSS----GSGGYGDG 300
>TC7897 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-like protein 2
precursor (Phytocyanin-like protein), partial (31%)
Length = 1482
Score = 41.2 bits (95), Expect = 0.001
Identities = 45/148 (30%), Positives = 51/148 (34%), Gaps = 5/148 (3%)
Frame = -3
Query: 1378 SVGSGWGGSNGDGGWRGHLNDRDRSSTPGSRTGRPSGVPRPYGGGRGRGRGSYNNRGHNN 1437
S GS G GD G D S G G P P G G +
Sbjct: 961 SAGSDDGVPEGDTS--GPEADGGVSPVVGDGAGGPPAGESPAGEGEVAVGPPAGELLVGD 788
Query: 1438 ERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWG---GG--SGWGGG 1492
E D A G G G A T D D + G P P G G GG +G G
Sbjct: 787 EDGDSAPGAGEAAGGALTGDGDGDVDADGGVPADGPPAGTGAPAGEGNTDGGVPAGEGSP 608
Query: 1493 ASTGDKSGWGGGANTGDKSGWGGGNGWG 1520
A GD G G G+ +GGG+G G
Sbjct: 607 AVGGDPDG-GLAFGDGEGEDFGGGDGGG 527
>TC8694 similar to UP|IF38_MEDTR (Q9XHM1) Eukaryotic translation initiation
factor 3 subunit 8 (eIF3 p110) (eIF3c), partial (23%)
Length = 986
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/124 (28%), Positives = 51/124 (40%), Gaps = 7/124 (5%)
Frame = +2
Query: 1426 GRGSYNNRGHNNERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWGG 1485
G G + + QD A+ G G A + +D SLS P + + G+G
Sbjct: 422 GGGGLDLPPRRRDGQDYAAAAAGGGGGAGGRWQDLSLSQ---------PRQGSGRAGYGS 574
Query: 1486 GSG------WGGGASTGDKSGWGGGANTGDKSGWGG-GNGWGGGASTGAEHGNSGWGSGS 1538
G G G + D++G GGG G +S +GG G GG++ HG+ S
Sbjct: 575 GGGRPFAFNQAAGGYSRDRTGRGGGGGGGYQSQYGGSGRAHQGGSALRGHHGDGSSRMVS 754
Query: 1539 KKAA 1542
K A
Sbjct: 755 LKGA 766
>TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%)
Length = 735
Score = 40.4 bits (93), Expect = 0.002
Identities = 31/102 (30%), Positives = 48/102 (46%), Gaps = 2/102 (1%)
Frame = +3
Query: 27 KKFKRLKK-GRGTEEGHSRQSDDDEFFGSGKGGRSAKEKELEYTLFDGEEGTHLEDIGEE 85
KK K ++K +G EE + D++E GRS E H ++ EE
Sbjct: 300 KKLKLVEKLNQGVEEEEEDEEDEEEQTPHPTRGRSRVE--------------HAQEEDEE 437
Query: 86 EEQG-EEEEDADIGEEDEMADFIVDEEEVDENGIPLRTRKLK 126
EE G EEEE+ ++ EDE + DE+E +E + + + K
Sbjct: 438 EENGEEEEEEEEVVVEDEQGNEDEDEDEEEEGVVVVEVKGRK 563
>AU251550
Length = 329
Score = 40.0 bits (92), Expect = 0.003
Identities = 22/55 (40%), Positives = 24/55 (43%)
Frame = -3
Query: 1481 GGWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGNSGWG 1535
GG GG G GGG + +G GG GW NG GGGA G G G
Sbjct: 300 GGCGGPGGPGGGGG**NMAGGGGDGGPCGGGGW*CPNGGGGGAGA*GSRGGPGGG 136
Score = 38.9 bits (89), Expect = 0.006
Identities = 26/64 (40%), Positives = 26/64 (40%), Gaps = 10/64 (15%)
Frame = -3
Query: 1484 GGGSGWGGGASTGDKSGWGGG------ANTGDKSGWGGGNGW----GGGASTGAEHGNSG 1533
GGG G GG G G GGG A G G GG GW GGG GA G
Sbjct: 327 GGGPGPGGCGGCGGPGGPGGGGG**NMAGGGGDGGPCGGGGW*CPNGGGGGAGA*GSRGG 148
Query: 1534 WGSG 1537
G G
Sbjct: 147 PGGG 136
Score = 34.7 bits (78), Expect = 0.12
Identities = 26/60 (43%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = -3
Query: 1481 GGWGGGSGWGGGAST-GDKSGWGGGAN--TGDKSGWGGGNGW--GGGASTGAEHGNSGWG 1535
GGW +G GGGA G + G GGG G G GGG W GGG G G G G
Sbjct: 210 GGW*CPNGGGGGAGA*GSRGGPGGGGL**PGGCGGPGGGGLW*PGGGGPGGP--GGPGCG 37
>AV776603
Length = 359
Score = 39.7 bits (91), Expect = 0.004
Identities = 37/120 (30%), Positives = 43/120 (35%), Gaps = 10/120 (8%)
Frame = +2
Query: 1432 NRGHNNERQDGASGWGSGWGSAATKDKDDSLSNFPGAKVQN-SPGREAFPGGWGGGSGWG 1490
N N+ D S W + TK ++ + AK N SP GWG GS
Sbjct: 17 NCAWKNKTSDLDGNQSSQWNT--TKASEEESPGWSSAKKSNDSPAT-----GWGQGS--- 166
Query: 1491 GGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGAEHGN---------SGWGSGSKKA 1541
G KSG GGAN S WGG GA N SGWG K+
Sbjct: 167 -----GVKSGSDGGANL--SSAWGGSKSGTSNTDVGAGWNNKPNKDGNKASGWGQAGHKS 325
Score = 33.1 bits (74), Expect = 0.34
Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Frame = +2
Query: 1449 GWGSAATKDKDDSLSNFPGAKVQNSPGREAFPGGWGGGSGWGGGASTGDKSGWGGGANTG 1508
GW SA K +DS + G Q S + GG S WGG S + G G N
Sbjct: 107 GWSSA--KKSNDSPATGWG---QGSGVKSGSDGGANLSSAWGGSKSGTSNTDVGAGWNNK 271
Query: 1509 DKSGWGGGNGWG--GGASTGAEHGN 1531
+GWG G S G + N
Sbjct: 272 PNKDGNKASGWGQAGHKSGGMDADN 346
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.314 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,710,565
Number of Sequences: 28460
Number of extensions: 346669
Number of successful extensions: 4185
Number of sequences better than 10.0: 250
Number of HSP's better than 10.0 without gapping: 2350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3365
length of query: 1548
length of database: 4,897,600
effective HSP length: 102
effective length of query: 1446
effective length of database: 1,994,680
effective search space: 2884307280
effective search space used: 2884307280
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Medicago: description of AC149050.4