BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148995.10 - phase: 0
(352 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC15470 351 9e-98
TC15471 207 3e-54
TC9708 weakly similar to UP|Q84ME1 (Q84ME1) At5g19080/T16G12_120... 135 1e-32
TC14881 129 7e-31
TC16772 77 3e-15
TC8260 similar to UP|Q94ES8 (Q94ES8) Nodule extensin (Fragment),... 62 2e-10
TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein... 52 2e-07
AV766525 51 3e-07
TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycop... 49 1e-06
TC11541 weakly similar to UP|O64756 (O64756) At2g34920 protein, ... 48 2e-06
BP043633 48 3e-06
TC10237 similar to UP|NO75_SOYBN (P08297) Early nodulin 75 precu... 47 5e-06
TC10929 similar to UP|Q94AX6 (Q94AX6) AT3g23280/K14B15_17, parti... 47 6e-06
BP039012 46 8e-06
AU251550 46 8e-06
AV407983 46 1e-05
AI967599 46 1e-05
TC19257 UP|Q9BDE4 (Q9BDE4) Selenoprotein P-like protein (Fragmen... 45 1e-05
TC10164 weakly similar to UP|O24099 (O24099) MtN12 protein (Frag... 45 1e-05
TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding p... 45 2e-05
>TC15470
Length = 882
Score = 351 bits (901), Expect = 9e-98
Identities = 176/239 (73%), Positives = 194/239 (80%)
Frame = +2
Query: 83 PHMDPAWVSRYYPCGPVVNQPAPFVEHQKAVTIRNDVNIKKETIVISPDEENPGFFLVSF 142
P MDP W C PAP+VE ++AVTI+NDVN+ ET+ I PDEENPG FLVSF
Sbjct: 5 PPMDPMW-----GCYQAPLPPAPYVEQREAVTIKNDVNVMFETLKIVPDEENPGHFLVSF 169
Query: 143 TFDAAVSGSITIFFFAKEDEGCILTPTKETHLAPVTVQFQQGLGQKFRQQAGTGINFSMF 202
TFDA VSGS+T+ FFAKE EGCILTP KE L PVTV FQQGLGQKFRQ AGTGI FS F
Sbjct: 170 TFDATVSGSVTVLFFAKEGEGCILTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIKFSEF 349
Query: 203 EESDLVKVGDVDVYPLAVKADASSDNHDGSNETETSSKPNSQITQAVFEKEKGEFRVKVV 262
+E++L+KVGD+DVYP+AVKADASS +HDGS ET S NSQITQAVFEKEKGEFRVKVV
Sbjct: 350 DEAELLKVGDMDVYPVAVKADASSGDHDGSEETPASGNTNSQITQAVFEKEKGEFRVKVV 529
Query: 263 KQILSVNGMRYELQEIYGIGNSVESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSG 321
KQIL VNGMRYELQEIYGIGNS+ESD+D N+ GKECVICLSEPRDT V PCRHM MC G
Sbjct: 530 KQILWVNGMRYELQEIYGIGNSMESDLDGNDPGKECVICLSEPRDTTVLPCRHMWMCKG 706
Score = 65.1 bits (157), Expect = 2e-11
Identities = 31/37 (83%), Positives = 32/37 (85%)
Frame = +3
Query: 315 HMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGTE 351
H +C GCAKVLRFQTNRCPICRQPVERLLEIKV E
Sbjct: 678 HAAIC-GCAKVLRFQTNRCPICRQPVERLLEIKVRPE 785
>TC15471
Length = 642
Score = 207 bits (526), Expect = 3e-54
Identities = 100/110 (90%), Positives = 103/110 (92%)
Frame = +3
Query: 242 NSQITQAVFEKEKGEFRVKVVKQILSVNGMRYELQEIYGIGNSVESDVDDNEQGKECVIC 301
NSQITQAVFEKEKGEFRVKVVKQIL VNGMRYELQEIYGIGNS+ESD+D N+ GKECVIC
Sbjct: 6 NSQITQAVFEKEKGEFRVKVVKQILWVNGMRYELQEIYGIGNSMESDLDGNDPGKECVIC 185
Query: 302 LSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGTE 351
LSEPRDT V PCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKV E
Sbjct: 186 LSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVRPE 335
>TC9708 weakly similar to UP|Q84ME1 (Q84ME1) At5g19080/T16G12_120, partial
(30%)
Length = 754
Score = 135 bits (339), Expect = 1e-32
Identities = 90/239 (37%), Positives = 116/239 (47%), Gaps = 13/239 (5%)
Frame = +1
Query: 1 MGNISSTGAHNRRRHATASRRTHPPPP-----PPVTPQPEIAP-------HQFVYPGAAP 48
MG S NRRR+ H PPP P PQP + P + P AA
Sbjct: 25 MGVSWSNNNSNRRRNNYPHAPPHLPPPYYYSHHPHHPQPALPPPPPQGYYYTSTNPSAAN 204
Query: 49 YPNPPMHYPQYHYPGYYPPPIPMPHHHHPHPHPHPHMDPAWVSRYYPCGPVVNQPAPFVE 108
Y PP Q++ GY +P H+ P +V+ G P P+V+
Sbjct: 205 YVAPP----QFYSNGYAANSMPARFHNQ--------QTPFFVNPGQGQGQPGAVPPPYVD 348
Query: 109 HQKAVTIRNDVNIKKETIVISPDEENPGFFLVSFTFDAAVSGSITIFFFAKEDEGCILTP 168
HQ A IRNDVN+ K T+ + D NP L+SF FDA GSITI++FAKE+E C TP
Sbjct: 349 HQTAKKIRNDVNLHKHTLRLDFDPNNPDHHLISFVFDALYDGSITIYYFAKEEEKCRFTP 528
Query: 169 TKETHLAPVTVQFQQGLGQKFRQQAGTGINFSMFEESDLVKVG-DVDVYPLAVKADASS 226
P+T FQ+G G KF Q +GTGI+ FE DL K DV+PL + A+ +S
Sbjct: 529 LFPEAFEPITFPFQKGAGLKFCQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETTS 705
>TC14881
Length = 609
Score = 129 bits (324), Expect = 7e-31
Identities = 54/83 (65%), Positives = 70/83 (84%)
Frame = +3
Query: 266 LSVNGMRYELQEIYGIGNSVESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCAKV 325
L ++ +RYEL+E+YGIG+S +D DDN+ KECVIC++EP+DT V PCRHMCMCS CAK
Sbjct: 3 LWIDDVRYELRELYGIGSSTAADFDDNDPQKECVICMTEPKDTAVLPCRHMCMCSDCAKE 182
Query: 326 LRFQTNRCPICRQPVERLLEIKV 348
LR Q+N+CPICRQP+E L+EIK+
Sbjct: 183 LRLQSNKCPICRQPIEELIEIKI 251
>TC16772
Length = 422
Score = 77.4 bits (189), Expect = 3e-15
Identities = 37/67 (55%), Positives = 47/67 (69%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 MGNISSTGAHNRRRH--ATASRRTHPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQ 58
MGN+ S+GA++RRRH + + RR HPPP PPV PQPEIA ++FVYP AA P
Sbjct: 244 MGNVGSSGANHRRRHGGSGSGRRIHPPPHPPVAPQPEIAANRFVYPAAAT--------PY 399
Query: 59 YHYPGYY 65
++YPGYY
Sbjct: 400 HNYPGYY 420
>TC8260 similar to UP|Q94ES8 (Q94ES8) Nodule extensin (Fragment), partial
(79%)
Length = 1017
Score = 61.6 bits (148), Expect = 2e-10
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +3
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAP-YPNPPMHYPQYHYPGYYPPPIPMPHHHHPHPHP 81
+P PPPP PH++ +P P Y +PP P+ HY PPP P H +PHPHP
Sbjct: 297 YPSPPPP--------PHKYPHPHPHPVYHSPPPPPPKKHYKYSSPPP---PVHTYPHPHP 443
Query: 82 HPHMDPAWVSRYYPCGPVVNQPAPFVEHQK 111
H P V Y PV + P P H+K
Sbjct: 444 VYHSPPPPVHTYPHPHPVYHSPPPPPPHEK 533
Score = 55.5 bits (132), Expect = 1e-08
Identities = 30/72 (41%), Positives = 36/72 (49%), Gaps = 7/72 (9%)
Frame = +3
Query: 23 HPPPPPPVTPQPEIA-PHQFVYPGAAPYPNP-PMHY----PQYHYPGYYPPPIPMPHHH- 75
H PPPP +P P PH + PY P P+++ P H P YP P P PH +
Sbjct: 153 HSPPPPVHSPPPPYEKPHPVYHSPPPPYEKPHPVYHSPPPPPPHKPYKYPSPPPPPHKYP 332
Query: 76 HPHPHPHPHMDP 87
HPHPHP H P
Sbjct: 333 HPHPHPVYHSPP 368
Score = 52.4 bits (124), Expect = 1e-07
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 18/85 (21%)
Frame = +3
Query: 17 TASRRTHPPPPPPVTPQPEIAPHQFVYPGAAPY--PNPPMHYPQYHY----PGYYPPPIP 70
+A+ + PPPP P +P V+ PY P+P H P Y P Y+ PP P
Sbjct: 96 SANHYAYSSPPPPPKPYSYHSPPPPVHSPPPPYEKPHPVYHSPPPPYEKPHPVYHSPPPP 275
Query: 71 MPH------------HHHPHPHPHP 83
PH H +PHPHPHP
Sbjct: 276 PPHKPYKYPSPPPPPHKYPHPHPHP 350
Score = 49.7 bits (117), Expect = 7e-07
Identities = 31/90 (34%), Positives = 38/90 (41%), Gaps = 26/90 (28%)
Frame = +3
Query: 24 PPPPPPVTP----QPEIAPHQFVYPGAAPY-----------------PNPPMH-----YP 57
PPPPPP P P PH++ +P P P PP+H +P
Sbjct: 264 PPPPPPHKPYKYPSPPPPPHKYPHPHPHPVYHSPPPPPPKKHYKYSSPPPPVHTYPHPHP 443
Query: 58 QYHYPGYYPPPIPMPHHHHPHPHPHPHMDP 87
YH P PPP+ H +PHPHP H P
Sbjct: 444 VYHSP---PPPV----HTYPHPHPVYHSPP 512
Score = 48.5 bits (114), Expect = 2e-06
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +3
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMH---YPQYHYPGYYPPPI---PMPHHHH 76
H PPPPP PH+ Y A+P P PP+H +P YH P PPP+ P PH+++
Sbjct: 501 HSPPPPP--------PHEKPYKYASP-PPPPVHTYPHPVYHSP---PPPVHSPPPPHYYY 644
Query: 77 PHPHPHPH 84
P P H
Sbjct: 645 KSPPPPYH 668
Score = 47.8 bits (112), Expect = 3e-06
Identities = 32/105 (30%), Positives = 42/105 (39%), Gaps = 19/105 (18%)
Frame = +3
Query: 24 PPPPPP------VTPQPEIAPHQFVYPGAAPY-PNPPMHYPQYHYPGYYPPPIPMPHHH- 75
PPPPPP +P P + H + +P + P PP+H + +P Y+ PP P PH
Sbjct: 363 PPPPPPKKHYKYSSPPPPV--HTYPHPHPVYHSPPPPVHTYPHPHPVYHSPPPPPPHEKP 536
Query: 76 -----------HPHPHPHPHMDPAWVSRYYPCGPVVNQPAPFVEH 109
H +PHP H P V P P P H
Sbjct: 537 YKYASPPPPPVHTYPHPVYHSPPPPVHSPPPPHYYYKSPPPPYHH 671
Score = 29.6 bits (65), Expect = 0.80
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 53 PMHYPQYHYPGYYPPPIPMPHHHHPHPHPHPHMDPAWVSRYYPCGPVVNQPAP 105
P HY PPP P P+ +H P P P + + PV + P P
Sbjct: 84 PSEISANHYAYSSPPPPPKPYSYHSPPPPVHSPPPPYEKPH----PVYHSPPP 230
>TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein 2, partial
(66%)
Length = 481
Score = 51.6 bits (122), Expect = 2e-07
Identities = 32/78 (41%), Positives = 35/78 (44%)
Frame = -1
Query: 24 PPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHPHPHPHP 83
PPP PP P P + P YP PYP PP P P Y PPP P P P P P P
Sbjct: 442 PPPYPPPPP*PPLPP----YPPPPPYPPPPRPPPP*PPPPYPPPP*P-PPPRPPPPAPPP 278
Query: 84 HMDPAWVSRYYPCGPVVN 101
P +P GPV +
Sbjct: 277 RRVPCTA---WPLGPVTS 233
Score = 30.4 bits (67), Expect = 0.47
Identities = 18/44 (40%), Positives = 21/44 (46%), Gaps = 3/44 (6%)
Frame = -1
Query: 47 APYPNPPMHYPQYHYPGYYPPP---IPMPHHHHPHPHPHPHMDP 87
AP P PP P P YPPP P+P + P P+P P P
Sbjct: 481 APPPPPPR--PPPRPPPPYPPPPP*PPLPPYPPPPPYPPPPRPP 356
>AV766525
Length = 564
Score = 50.8 bits (120), Expect = 3e-07
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = -1
Query: 298 CVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLE 345
CVICL + +++ PC HMC C+GC+ L CP+CR+ +E++++
Sbjct: 414 CVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQIEKVVK 283
>TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycoprotein
(HRGP) (Fragment), partial (57%)
Length = 941
Score = 48.9 bits (115), Expect = 1e-06
Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 17/99 (17%)
Frame = +1
Query: 24 PPP-----PPPVTPQPEIAPHQFVYPGAAPYPNPPMHY-----------PQYHYPGYYPP 67
PPP PPP +P P + P +P P+PP +Y P YHY PP
Sbjct: 217 PPPYYYKSPPPPSPSPPPPYYYKSPPPPSPIPHPPYYYKSPPPPTSSPPPPYHYVSPPPP 396
Query: 68 -PIPMPHHHHPHPHPHPHMDPAWVSRYYPCGPVVNQPAP 105
P P P +H+ P P P PA Y P V P P
Sbjct: 397 SPSPPPPYHYASP-PPPSPSPAPTYIYKSPPPPVKLPPP 510
Score = 47.0 bits (110), Expect = 5e-06
Identities = 29/91 (31%), Positives = 38/91 (40%), Gaps = 6/91 (6%)
Frame = +1
Query: 22 THPPPPP-----PVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPP-PIPMPHHH 75
+H PPPP P P P P + P P+PP P Y+Y PP PIP P ++
Sbjct: 157 SHSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPP---PPYYYKSPPPPSPIPHPPYY 327
Query: 76 HPHPHPHPHMDPAWVSRYYPCGPVVNQPAPF 106
+ P P P P P + P P+
Sbjct: 328 YKSPPPPTSSPPPPYHYVSPPPPSPSPPPPY 420
Score = 44.3 bits (103), Expect = 3e-05
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 23 HPP-----PPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPP-PIPMPHHHH 76
HPP PPPP + P P+ +V P P P+PP P YHY PP P P P + +
Sbjct: 313 HPPYYYKSPPPPTSSPPP--PYHYVSP-PPPSPSPP---PPYHYASPPPPSPSPAPTYIY 474
Query: 77 PHPHPHPHMDPAWVSRYYPCGPVVNQPAP 105
P P + P Y+ P P+P
Sbjct: 475 KSPPPPVKLPP---PPYHYTSPPPPSPSP 552
Score = 43.5 bits (101), Expect = 5e-05
Identities = 29/93 (31%), Positives = 42/93 (44%), Gaps = 7/93 (7%)
Frame = +1
Query: 21 RTHPPPPPPVTP----QPEIAPHQFVY-PGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHH 75
++ PPPPP P P P+ + P +P P PP +Y P + PPP P+++
Sbjct: 16 KSPPPPPPVPKPYYYKSPPPPPYYYKSPPPPSPSPPPPYYYQSPPPPSHSPPP---PYYY 186
Query: 76 HPHPHPHPHMDPAWVSRYY--PCGPVVNQPAPF 106
P P P P + YY P P + P P+
Sbjct: 187 KSPPPPSPSPPPPY---YYKSPPPPSPSPPPPY 276
Score = 42.4 bits (98), Expect = 1e-04
Identities = 30/89 (33%), Positives = 38/89 (41%), Gaps = 5/89 (5%)
Frame = +1
Query: 22 THPPPPPP--VTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPI---PMPHHHH 76
T PPPP V+P P Y A+P P P P Y Y PPP+ P P+H+
Sbjct: 349 TSSPPPPYHYVSPPPPSPSPPPPYHYASPPPPSPSPAPTYIYKS-PPPPVKLPPPPYHYT 525
Query: 77 PHPHPHPHMDPAWVSRYYPCGPVVNQPAP 105
P P P P ++ + P P P P
Sbjct: 526 SPPPPSPSPAPTYIYKSPP--PPTKSPPP 606
Score = 41.6 bits (96), Expect = 2e-04
Identities = 30/86 (34%), Positives = 41/86 (46%), Gaps = 4/86 (4%)
Frame = +1
Query: 25 PPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPP-PIPMPHHHH---PHPH 80
PPPP +P P P+ + P P P+PP P Y+Y PP P P P +++ P P
Sbjct: 145 PPPPSHSPPP---PYYYKSP-PPPSPSPP---PPYYYKSPPPPSPSPPPPYYYKSPPPPS 303
Query: 81 PHPHMDPAWVSRYYPCGPVVNQPAPF 106
P PH + S P P + P P+
Sbjct: 304 PIPHPPYYYKS---PPPPTSSPPPPY 372
Score = 35.8 bits (81), Expect = 0.011
Identities = 26/75 (34%), Positives = 28/75 (36%), Gaps = 6/75 (8%)
Frame = +1
Query: 25 PPPP-----PVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPP-PIPMPHHHHPH 78
PPPP P P P AP P PP P YHY PP P P P + +
Sbjct: 406 PPPPYHYASPPPPSPSPAPTYIYKSPPPPVKLPP---PPYHYTSPPPPSPSPAPTYIYKS 576
Query: 79 PHPHPHMDPAWVSRY 93
P P P V Y
Sbjct: 577 PPPPTKSPPPPVYIY 621
>TC11541 weakly similar to UP|O64756 (O64756) At2g34920 protein, partial
(6%)
Length = 553
Score = 48.1 bits (113), Expect = 2e-06
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 282 GNSVESDVDDNEQGK----ECVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICR 337
G+ E+ D ++ G C +C D++++ C HMC CS CA L +CP+CR
Sbjct: 115 GSVAETSDDGSKWGHVKKGTCCVCCDSHIDSLLYRCGHMCTCSKCANELIRGGGKCPLCR 294
Query: 338 QPV 340
P+
Sbjct: 295 API 303
>BP043633
Length = 542
Score = 47.8 bits (112), Expect = 3e-06
Identities = 33/101 (32%), Positives = 37/101 (35%), Gaps = 32/101 (31%)
Frame = +1
Query: 20 RRTHPPPPPPVTPQPEIAPH-----------------QFVYP------------GAAPYP 50
R PPPPPP P P H QF Y G P P
Sbjct: 238 RPPQPPPPPPPPPDPNHHHHFPQIPPPHPPQAPWYSPQFQYHHPSQTPSPPPQWGPPPPP 417
Query: 51 NPPMHYPQYHYPGYYPPPIPMPH-HHHPHPH--PHPHMDPA 88
PP P ++P +PPP P P H PHP PH H+ A
Sbjct: 418 PPPPSNPYSYHPKQFPPPPPPPRPPHPPHPQFPPHSHIPQA 540
Score = 38.9 bits (89), Expect = 0.001
Identities = 29/90 (32%), Positives = 33/90 (36%), Gaps = 2/90 (2%)
Frame = +1
Query: 24 PPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIP--MPHHHHPHPHP 81
PP PPP P P P PN H+PQ P +PP P P + HP
Sbjct: 241 PPQPPPPPPPP-------------PDPNHHHHFPQ--IPPPHPPQAPWYSPQFQYHHPSQ 375
Query: 82 HPHMDPAWVSRYYPCGPVVNQPAPFVEHQK 111
P P W P P N P+ H K
Sbjct: 376 TPSPPPQWGPPPPPPPPPSN---PYSYHPK 456
Score = 37.0 bits (84), Expect = 0.005
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +1
Query: 38 PHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHPHPH---PHPHMDPAWVSRYY 94
PH ++ P P P PP PPP P P+HHH P PHP P W S +
Sbjct: 223 PHGYMRP---PQPPPP------------PPPPPDPNHHHHFPQIPPPHPPQAP-WYSPQF 354
Query: 95 PCGPVVNQPAP 105
P+P
Sbjct: 355 QYHHPSQTPSP 387
>TC10237 similar to UP|NO75_SOYBN (P08297) Early nodulin 75 precursor (N-75)
(NGM-75), partial (49%)
Length = 803
Score = 47.0 bits (110), Expect = 5e-06
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +1
Query: 24 PPP---PPPVTPQPEIAPHQFVYPGAAPYPNPPMHY--PQYHYPGYYPPPIPMPHHHHPH 78
PPP PP P P +P P P P PP ++ P YH P PPP+ P H P
Sbjct: 232 PPPEYEPPQEKPPPVYSPPYERPPTGHPTPYPPFYHLPPVYHPPYEKPPPLYQPPHEKPP 411
Query: 79 PHPHPHMDP 87
+ PH P
Sbjct: 412 IYEPPHEKP 438
Score = 45.8 bits (107), Expect = 1e-05
Identities = 32/97 (32%), Positives = 38/97 (38%), Gaps = 8/97 (8%)
Frame = +1
Query: 15 HATASRRTHPPP---PPPVTPQPEIAPHQFVYPGA--APYPNPPMHY--PQYHYPGYYPP 67
H + PPP PP P P P + P A PY PP Y PQ P Y P
Sbjct: 106 HKKPPSQYQPPPEYEPPQEKPPPVYLPPYWKPPPAYPPPYEKPPPEYEPPQEKPPPVYSP 285
Query: 68 PIPMPHHHHPHPH-PHPHMDPAWVSRYYPCGPVVNQP 103
P P HP P+ P H+ P + Y P+ P
Sbjct: 286 PYERPPTGHPTPYPPFYHLPPVYHPPYEKPPPLYQPP 396
Score = 38.5 bits (88), Expect = 0.002
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +1
Query: 23 HPPPP---PPVTPQPEIAPHQFVYPGAAPYPNPPMHY---PQYHYPGYYPPPIPMPHHHH 76
H PP PP+ P P P P+ PP Y P+Y P PPP+ +P +
Sbjct: 28 HEKPPFEKPPLEKPPHEKPPPEYQP---PHKKPPSQYQPPPEYEPPQEKPPPVYLPPYWK 198
Query: 77 PHP-HPHPHMDP 87
P P +P P+ P
Sbjct: 199PPPAYPPPYEKP 234
Score = 37.7 bits (86), Expect = 0.003
Identities = 21/73 (28%), Positives = 31/73 (41%), Gaps = 7/73 (9%)
Frame = +1
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAA---PYPNPPMHYPQYHYPGYYPPPIPMPHHHHP-- 77
HP P PP P + + P P+ PP++ P + P Y PP P + P
Sbjct: 310 HPTPYPPFYHLPPVYHPPYEKPPPLYQPPHEKPPIYEPPHEKPPIYEPPHEKPPLYEPPP 489
Query: 78 --HPHPHPHMDPA 88
+P P+ H P+
Sbjct: 490 GYNPPPYGHYPPS 528
Score = 35.0 bits (79), Expect = 0.019
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHY-PGYYPPPIPMPHHHHPHPHP 81
H PPP P + P Q+ P P PP P Y P Y+ PP P + P+ P
Sbjct: 73 HEKPPPEYQPPHKKPPSQYQPP---PEYEPPQEKPPPVYLPPYWKPP---PAYPPPYEKP 234
Query: 82 HPHMDP 87
P +P
Sbjct: 235 PPEYEP 252
Score = 35.0 bits (79), Expect = 0.019
Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Frame = +1
Query: 24 PPP--------PPPVTPQP-EIAPHQFVYPGAAPYPNPPMHYPQYHYPGY-YPPPIPMPH 73
PPP PPP P P E P ++ P P PP++ P Y P +P P P +
Sbjct: 166 PPPVYLPPYWKPPPAYPPPYEKPPPEYEPPQEKP---PPVYSPPYERPPTGHPTPYPPFY 336
Query: 74 HHHPHPHPHPHMDPAWVSRYYPCGPVVNQP 103
H P HP P + P+ P
Sbjct: 337 HLPPVYHPPYEKPPPLYQPPHEKPPIYEPP 426
Score = 33.1 bits (74), Expect = 0.072
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 52 PPMHYPQYHYPGYYPPPIPMPHHHHPHP-HPHPHMDPAWVSRYYP 95
PP + P + P + PP+ P H P P + PH P S+Y P
Sbjct: 7 PPKYQPPHEKPPFEKPPLEKPPHEKPPPEYQPPHKKPP--SQYQP 135
>TC10929 similar to UP|Q94AX6 (Q94AX6) AT3g23280/K14B15_17, partial (16%)
Length = 783
Score = 46.6 bits (109), Expect = 6e-06
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 293 EQGKECVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEI 346
E G CVICL P + PC H+ C C ++ + CP+CR +++++++
Sbjct: 254 EIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKL 415
>BP039012
Length = 582
Score = 46.2 bits (108), Expect = 8e-06
Identities = 29/83 (34%), Positives = 37/83 (43%), Gaps = 10/83 (12%)
Frame = +1
Query: 16 ATASRRTHPPPPPPVTP-----QPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIP 70
ATA + + PPPPP+TP QP + + P P P + P H G PP P
Sbjct: 73 ATALKPSSAPPPPPLTPHYSLSQPHLLH*SNLQINVNPPPLPLLPPPASHSGGSLSPPPP 252
Query: 71 MPHHH-----HPHPHPHPHMDPA 88
P H HP H H H+ P+
Sbjct: 253 TPPPHKMTVLHPLLHLHLHLPPS 321
Score = 28.9 bits (63), Expect = 1.4
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 6/33 (18%)
Frame = +2
Query: 55 HYPQYHYPG---YYPPPIPMP---HHHHPHPHP 81
H+PQ+H+ YY P HHH+ HP P
Sbjct: 242 HHPQHHHHTK*QYYTPSSTFTFTFHHHYHHPQP 340
Score = 26.2 bits (56), Expect = 8.8
Identities = 18/79 (22%), Positives = 24/79 (29%), Gaps = 6/79 (7%)
Frame = +3
Query: 15 HATASRRTHPPPPPPVTPQPEIAP------HQFVYPGAAPYPNPPMHYPQYHYPGYYPPP 68
+ T ++ PPPP +P P + + P P P
Sbjct: 252 NTTTTQNDSTTPPPPPSPSPSTITITIPNLQELFHVSELQLSTDPTAALHLLERSLVPNP 431
Query: 69 IPMPHHHHPHPHPHPHMDP 87
P PHPH PH P
Sbjct: 432 -PQDQPVSPHPHDPPHHQP 485
>AU251550
Length = 329
Score = 46.2 bits (108), Expect = 8e-06
Identities = 30/80 (37%), Positives = 32/80 (39%)
Frame = +2
Query: 26 PPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHPHPHPHPHM 85
PPPP PQP PG Y NPP P PPP P HHH P PH P
Sbjct: 92 PPPPGPPQP---------PG---YYNPPPPGPPRDPYAPAPPPPPFGHHHPPPPHGPPSP 235
Query: 86 DPAWVSRYYPCGPVVNQPAP 105
P + +Y P P P
Sbjct: 236 PPP--AMFYQPPPPPGPPGP 289
Score = 35.8 bits (81), Expect = 0.011
Identities = 22/63 (34%), Positives = 23/63 (35%), Gaps = 5/63 (7%)
Frame = +2
Query: 24 PPPPP-----PVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHPH 78
PP PP P P P H P P P PP + Y PPP P P
Sbjct: 140 PPGPPRDPYAPAPPPPPFGHHHPPPPHGPPSPPPPAMF-------YQPPPPPGPPGPPQP 298
Query: 79 PHP 81
PHP
Sbjct: 299 PHP 307
Score = 34.7 bits (78), Expect = 0.025
Identities = 25/66 (37%), Positives = 27/66 (40%)
Frame = +2
Query: 44 PGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHPHPHPHPHMDPAWVSRYYPCGPVVNQP 103
PG P PP P YH P PP P P ++ P P P DP Y P P P
Sbjct: 44 PGPPGPPGPPP--PGYHNPP--PPGPPQPPGYYNPPPPGPPRDP-----YAPAPP----P 184
Query: 104 APFVEH 109
PF H
Sbjct: 185 PPFGHH 202
Score = 33.9 bits (76), Expect = 0.042
Identities = 20/46 (43%), Positives = 20/46 (43%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPP 68
H PPPP P P P F P P P P P H PG PPP
Sbjct: 200 HHPPPPHGPPSPP-PPAMFYQPPPPPGPPGPPQPP--HPPGPGPPP 328
>AV407983
Length = 417
Score = 45.8 bits (107), Expect = 1e-05
Identities = 33/101 (32%), Positives = 44/101 (42%), Gaps = 4/101 (3%)
Frame = +2
Query: 20 RRTHPPPPPPV--TPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHP 77
RR H PP P TP+P+ P P P P P +P + P P+P P HP
Sbjct: 107 RRAHLPPHPYPHHTPRPKTPPPPPRTPRRFPLLLPRHTLPLLRHPFFLPSPLPPPPPSHP 286
Query: 78 --HPHPHPHMDPAWVSRYYPCGPVVNQPAPFVEHQKAVTIR 116
P PHPH P + R +Q +P + HQ+ + R
Sbjct: 287 LLPPRPHPHR-PRQIPR--------SQISPCLRHQQRLQRR 382
>AI967599
Length = 412
Score = 45.8 bits (107), Expect = 1e-05
Identities = 21/73 (28%), Positives = 38/73 (51%), Gaps = 1/73 (1%)
Frame = +1
Query: 275 LQEIYGIGNSVESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCA-KVLRFQTNRC 333
LQE+ + + E +V N +EC+IC+ + + PC H MC+ C+ + R C
Sbjct: 16 LQELDNLEDMSEKEVSSN---RECIICMKDEVSVVFLPCAHQVMCASCSDEYGRKGKAAC 186
Query: 334 PICRQPVERLLEI 346
P CR +++ + +
Sbjct: 187 PCCRVQIQQRIRV 225
>TC19257 UP|Q9BDE4 (Q9BDE4) Selenoprotein P-like protein (Fragment), partial
(9%)
Length = 525
Score = 45.4 bits (106), Expect = 1e-05
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = -1
Query: 36 IAPHQFVYPGA-----APYPNPPMHYPQYHYPGYYPPPIPMPH-HHHPHPHPHPHMDPAW 89
+ PH PG P +P + P H P+ +P HHHPHPHPHPH P
Sbjct: 486 VQPHHI--PGGLGMYGTPVGHPVVAAPPGHMASAVGTPVMLPPGHHHPHPHPHPH-PPYV 316
Query: 90 VSRYYPCGP 98
V YP P
Sbjct: 315 VPLAYPMAP 289
>TC10164 weakly similar to UP|O24099 (O24099) MtN12 protein (Fragment),
partial (66%)
Length = 566
Score = 45.4 bits (106), Expect = 1e-05
Identities = 30/80 (37%), Positives = 34/80 (42%), Gaps = 15/80 (18%)
Frame = +3
Query: 23 HPPPPPPVTPQPEIA--------PHQFVYPGAAPYP---NPPMHYPQYHYPG----YYPP 67
H PPPP T P+I P YP P P +PP +P H P YPP
Sbjct: 18 HSPPPPIQTYPPQIPNPISHSPPPPGQTYPPYIPNPIFLSPPPPFPISHSPPPPVQTYPP 197
Query: 68 PIPMPHHHHPHPHPHPHMDP 87
IP+P H P P P H P
Sbjct: 198NIPIPIDHSPPPVPINHAPP 257
>TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding protein 2,
partial (93%)
Length = 725
Score = 45.1 bits (105), Expect = 2e-05
Identities = 30/80 (37%), Positives = 32/80 (39%), Gaps = 12/80 (15%)
Frame = -1
Query: 24 PPPPPPVTPQPEIAPHQFVYPG---------AAPYPNPPMHYPQYHYPGYYPP---PIPM 71
PPPPPP P E P P PYP PP P+ P YPP P P
Sbjct: 545 PPPPPPPLP*REPPPSPPYPPSRRPP*PPPPPPPYPPPPPP*PRDPPPPPYPPSRRPPPP 366
Query: 72 PHHHHPHPHPHPHMDPAWVS 91
P+ P P P P AW S
Sbjct: 365 PYPPPPRPPPPPPPPRAWAS 306
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.318 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,757,863
Number of Sequences: 28460
Number of extensions: 257418
Number of successful extensions: 8953
Number of sequences better than 10.0: 841
Number of HSP's better than 10.0 without gapping: 4420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6591
length of query: 352
length of database: 4,897,600
effective HSP length: 91
effective length of query: 261
effective length of database: 2,307,740
effective search space: 602320140
effective search space used: 602320140
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Medicago: description of AC148995.10