TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148995.1 + phase: 0 
         (220 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC11453                                                               249  3e-67
TC17601 similar to UP|Q9FNH8 (Q9FNH8) Lysine decarboxylase-like ...   192  3e-50
AU089412                                                              186  3e-48
BP050275                                                               79  6e-16
BP030354                                                               54  7e-16
TC10522                                                                63  5e-11
TC12496 similar to UP|Q8SA64 (Q8SA64) NIMA-related protein kinas...    27  2.1
BP080899                                                               26  4.7
TC17297 similar to GB|AAO64832.1|29028906|BT005897 At2g02080 {Ar...    26  4.7
TC18975 similar to UP|AAS54026 (AAS54026) AFR654Wp, partial (11%)      26  6.2
BP029154                                                               26  6.2
AW720305                                                               25  8.0
TC15955                                                                25  8.0

>TC11453 
          Length = 555

 Score =  249 bits (635), Expect = 3e-67
 Identities = 124/129 (96%), Positives = 127/129 (98%)
 Frame = +3

Query: 75  VIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQ 134
           VIPKTLMPRELTGETVGEVKAVA+MHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQ
Sbjct: 168 VIPKTLMPRELTGETVGEVKAVANMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQ 347

Query: 135 LGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEEYVPC 194
           LGIHDKPVGLVNVDGYF+SLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEEYVPC
Sbjct: 348 LGIHDKPVGLVNVDGYFSSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEEYVPC 527

Query: 195 HEGVASKLS 203
           HE VA KL+
Sbjct: 528 HESVACKLN 554


>TC17601 similar to UP|Q9FNH8 (Q9FNH8) Lysine decarboxylase-like protein,
           partial (53%)
          Length = 528

 Score =  192 bits (489), Expect = 3e-50
 Identities = 91/115 (79%), Positives = 105/115 (91%)
 Frame = +2

Query: 11  SKFKRICVFCGSSPGKKTTYQDAAMNLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 70
           S+F+RICV+CGSSPGK  +YQ AA+ LG +LV RNIDLVYGGGSIGLMGL+SQ V+DGGR
Sbjct: 182 SRFRRICVYCGSSPGKSPSYQLAAIQLGEQLVERNIDLVYGGGSIGLMGLISQVVYDGGR 361

Query: 71  HVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEE 125
           HV+GVIPKTLMPRE+TG TVGEV+AV+ MHQRKAEMA+ +DAFIALPGGYGTLEE
Sbjct: 362 HVLGVIPKTLMPREITGVTVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEE 526


>AU089412 
          Length = 486

 Score =  186 bits (472), Expect = 3e-48
 Identities = 91/104 (87%), Positives = 98/104 (93%)
 Frame = +2

Query: 4   RNGEIKLSKFKRICVFCGSSPGKKTTYQDAAMNLGNELVSRNIDLVYGGGSIGLMGLVSQ 63
           ++GEI+ SKFKRICVFCGSSPGKK  YQDAA+ LGNELVSRNIDLVYGGGSIGLMGLVSQ
Sbjct: 173 KHGEIRHSKFKRICVFCGSSPGKKPXYQDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQ 352

Query: 64  AVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMA 107
           AVHDGGRHVIGVIP TLMPRELTGET+GEVKAVA+MH +KAEMA
Sbjct: 353 AVHDGGRHVIGVIPXTLMPRELTGETLGEVKAVANMHXKKAEMA 484


>BP050275 
          Length = 498

 Score = 79.0 bits (193), Expect = 6e-16
 Identities = 38/46 (82%), Positives = 41/46 (88%)
 Frame = -2

Query: 159 DKAVEEGFISPNARHIIVSAPTAKELVKKLEEYVPCHEGVASKLSW 204
           D+AVEEGFISP ARHIIVSAPT KELVKK+EEY P HE VAS+LSW
Sbjct: 497 DQAVEEGFISPPARHIIVSAPTPKELVKKMEEYFPVHERVASQLSW 360


>BP030354 
          Length = 204

 Score = 54.3 bits (129), Expect(2) = 7e-16
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = -3

Query: 137 IHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISP 169
           IH KPVGL+NVDGY+NSLL+  D  V+EGFI P
Sbjct: 202 IHKKPVGLLNVDGYYNSLLALFDNGVQEGFIKP 104



 Score = 44.7 bits (104), Expect(2) = 7e-16
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -1

Query: 167 ISPNARHIIVSAPTAKELVKKLEEYVPCHEGVA 199
           +S  AR+I+VSAP+AKEL+ K+E Y P HE VA
Sbjct: 111 LSLGARNIVVSAPSAKELMMKMEHYTPSHENVA 13


>TC10522 
          Length = 478

 Score = 62.8 bits (151), Expect = 5e-11
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = +1

Query: 171 ARHIIVSAPTAKELVKKLEEYVPCHEGVASKLSWQMEQQLAYPQDYDISR 220
           ARHIIVSA TA++L+ K+EEYVP H G   KLSW+ EQQ+     +DISR
Sbjct: 4   ARHIIVSAHTAQDLMCKVEEYVPMHSGAGPKLSWEEEQQIVNTAMFDISR 153


>TC12496 similar to UP|Q8SA64 (Q8SA64) NIMA-related protein kinase, partial
           (10%)
          Length = 770

 Score = 27.3 bits (59), Expect = 2.1
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +3

Query: 93  VKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNV 147
           + + A++HQR+ + + +     AL G       LL+   + +LG+  KP GL  V
Sbjct: 6   IHSSAELHQRRFDTSSYQQRAEALEGLLEFSARLLQHQRFDELGVLLKPFGLEKV 170


>BP080899 
          Length = 216

 Score = 26.2 bits (56), Expect = 4.7
 Identities = 11/23 (47%), Positives = 16/23 (68%)
 Frame = -3

Query: 110 SDAFIALPGGYGTLEELLEVITW 132
           S A +++    G LEE+LEV+TW
Sbjct: 205 SFARVSVQNHVGVLEEILEVLTW 137


>TC17297 similar to GB|AAO64832.1|29028906|BT005897 At2g02080 {Arabidopsis
           thaliana;}, partial (4%)
          Length = 541

 Score = 26.2 bits (56), Expect = 4.7
 Identities = 13/40 (32%), Positives = 24/40 (59%), Gaps = 6/40 (15%)
 Frame = +3

Query: 38  GNELVSRNIDLVYGGGS------IGLMGLVSQAVHDGGRH 71
           GNE + +N+DL +GG        +G+ G++ + ++ GG H
Sbjct: 114 GNEKLPQNLDLSFGGSDKLTLDFLGVGGMM-RNINSGGEH 230


>TC18975 similar to UP|AAS54026 (AAS54026) AFR654Wp, partial (11%)
          Length = 665

 Score = 25.8 bits (55), Expect = 6.2
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +2

Query: 133 AQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKL 188
           A LGI  K V  V +D  F+S L+  +   +EG+       +I     AKE+  K+
Sbjct: 14  ASLGIWKKVVN*VIMDDLFDSSLNLEETHFKEGYDEGYKDGLIAGKDEAKEVGLKV 181


>BP029154 
          Length = 474

 Score = 25.8 bits (55), Expect = 6.2
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +3

Query: 194 CHEGVASKLSWQMEQQLAYP 213
           CH  VA K S    QQL YP
Sbjct: 231 CHSSVADKFSATSYQQLTYP 290


>AW720305 
          Length = 577

 Score = 25.4 bits (54), Expect = 8.0
 Identities = 13/35 (37%), Positives = 21/35 (59%)
 Frame = +3

Query: 135 LGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISP 169
           LGI + PV + +++       + IDKA EEG++ P
Sbjct: 189 LGIIENPVSIKSIE------CAIIDKAFEEGWMVP 275


>TC15955 
          Length = 1042

 Score = 25.4 bits (54), Expect = 8.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 188 LEEYVPCHEGVASKLSW 204
           LE+Y+ CH+  AS + W
Sbjct: 974 LEKYITCHQSRASLIKW 924


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.317    0.136    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,404,131
Number of Sequences: 28460
Number of extensions: 38335
Number of successful extensions: 200
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of query: 220
length of database: 4,897,600
effective HSP length: 87
effective length of query: 133
effective length of database: 2,421,580
effective search space: 322070140
effective search space used: 322070140
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)