TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148970.12 + phase: 0 
         (560 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BP057878                                                              171  3e-43
AV768958                                                               74  8e-14
TC11846 homologue to UP|Q9FEL1 (Q9FEL1) Lysyl-tRNA synthetase (F...    68  3e-12
TC10991 similar to UP|Q8VYA0 (Q8VYA0) Aspartate--tRNA ligase-lik...    58  5e-09
TC14678 similar to UP|Q8VYA0 (Q8VYA0) Aspartate--tRNA ligase-lik...    49  2e-06
TC12236 similar to UP|Q9LJE2 (Q9LJE2) Lysyl-tRNA synthetase, par...    36  0.019
TC13781 homologue to UP|SYN1_ARATH (Q9SW96) Asparaginyl-tRNA syn...    35  0.042
AW720050                                                               28  5.1
TC16617 similar to UP|Q9FJY6 (Q9FJY6) Apospory-associated protei...    28  5.1

>BP057878 
          Length = 546

 Score =  171 bits (433), Expect = 3e-43
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = -2

Query: 459 KHELANAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDETFCTALEYGLPPTAGWGLGI 518
           KHE+ NAYTELNDPVVQRQRFA+QLKDRQSGDDEAMALDETFCTALEYGLPPTAGWGLGI
Sbjct: 545 KHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTAGWGLGI 366

Query: 519 DRLTMLLTDSQNIKEVLLFPAMKPQD 544
           DRLTM+ TDSQNIKEVLLFPAMKPQD
Sbjct: 365 DRLTMIFTDSQNIKEVLLFPAMKPQD 288


>AV768958 
          Length = 436

 Score = 73.6 bits (179), Expect = 8e-14
 Identities = 38/91 (41%), Positives = 52/91 (56%), Gaps = 18/91 (19%)
 Frame = -3

Query: 471 DPVVQRQRFADQLKDRQS------------------GDDEAMALDETFCTALEYGLPPTA 512
           DP+ QR R  DQ++  +                    D   + LD+ F TALEYG+PP +
Sbjct: 431 DPIDQRGRLEDQIRQHEKKKAAISTNGDPKEGIENEDDSYEVTLDDDFLTALEYGMPPAS 252

Query: 513 GWGLGIDRLTMLLTDSQNIKEVLLFPAMKPQ 543
           G GLGIDRL MLLT+S +I++V+ FP +K Q
Sbjct: 251 GMGLGIDRLVMLLTNSPSIRDVIAFPVLKVQ 159


>TC11846 homologue to UP|Q9FEL1 (Q9FEL1) Lysyl-tRNA synthetase (Fragment),
           partial (19%)
          Length = 570

 Score = 68.2 bits (165), Expect = 3e-12
 Identities = 31/32 (96%), Positives = 32/32 (99%)
 Frame = +2

Query: 513 GWGLGIDRLTMLLTDSQNIKEVLLFPAMKPQD 544
           GWGLGIDRLTM+LTDSQNIKEVLLFPAMKPQD
Sbjct: 2   GWGLGIDRLTMILTDSQNIKEVLLFPAMKPQD 97


>TC10991 similar to UP|Q8VYA0 (Q8VYA0) Aspartate--tRNA ligase-like protein,
           partial (42%)
          Length = 680

 Score = 57.8 bits (138), Expect = 5e-09
 Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 7/231 (3%)
 Frame = +2

Query: 93  LHDDGFKVQVMADASKSDLNEAGFDKVHSNVKRG---DIVGITGFPGKSRKG---ELSIF 146
           + ++GF VQ +  A + D+      K  + + R    D+VG+   P    KG   ++ I 
Sbjct: 5   VRENGFTVQCLVQA-QPDVVSPQMVKFAAALNRESIIDVVGVVSVPAAPIKGATQQVEIQ 181

Query: 147 PKTFVVLSHCLHMMPRQKSAAAAAADNAWLPGKTRNPEAYTLKDQETRYRLRHLDLMLNT 206
            +    +   +  +P     AA +  +  +    +  +     +Q+TR   R LDL    
Sbjct: 182 VRKLYCVGRAVPTLPINLEDAARS--DVEVEKALQAGDQLVRVNQDTRLNFRVLDLRTPA 355

Query: 207 EVREIFRTRSKIISYVRSFLDKLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMRLFMRI 266
             + IFR +S + +  R FL K +F+E+ TP   +IAG +     V   +       +  
Sbjct: 356 N-QGIFRIQSHVGNAFRQFLLKENFVEIHTP--KLIAGSSEGGAAVFRLDYKGQPACLAQ 526

Query: 267 APELYLKKLVVGGLNRVYEIGKQFRNE-GIDLTHNPEFTTCEFYMAYKDYY 316
           +P+L+ +  + G   RV+EIG  FR E      H  EFT  +  M  K +Y
Sbjct: 527 SPQLHKQMSICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKKHY 679


>TC14678 similar to UP|Q8VYA0 (Q8VYA0) Aspartate--tRNA ligase-like protein,
           partial (25%)
          Length = 637

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 26/92 (28%), Positives = 45/92 (48%)
 Frame = +3

Query: 447 PGLTERFELFINKHELANAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDETFCTALEY 506
           P  T  F++FI   E+ +          QR    D L++R +     ++   T+  +  Y
Sbjct: 36  PAYTNSFDVFIRGEEIISG--------AQRIHVPDFLEERAAACGIEVSTISTYIDSFRY 191

Query: 507 GLPPTAGWGLGIDRLTMLLTDSQNIKEVLLFP 538
           G PP  G+G+G++R+ ML     NI++  L+P
Sbjct: 192 GAPPHGGFGVGLERVVMLFCGLDNIRKTSLYP 287


>TC12236 similar to UP|Q9LJE2 (Q9LJE2) Lysyl-tRNA synthetase, partial (16%)
          Length = 429

 Score = 35.8 bits (81), Expect = 0.019
 Identities = 22/72 (30%), Positives = 39/72 (53%), Gaps = 2/72 (2%)
 Frame = +2

Query: 26  RLKYLSTEKEEGRNPYPHKFSATMTIKQYIKEYEGLSDGQHLDDVS--VSLTGKIMHKRS 83
           RLK +   + +G NPY + +  T +  Q    Y+ L +G+  +  +  VS+ G+I+ +R+
Sbjct: 215 RLKKVEELRSKGLNPYAYGWDKTHSADQLQDIYKDLGNGEEANSENDHVSVAGRIVARRA 394

Query: 84  SGAKLVFYDLHD 95
            G KL F  + D
Sbjct: 395 FG-KLAFXTIRD 427


>TC13781 homologue to UP|SYN1_ARATH (Q9SW96) Asparaginyl-tRNA synthetase,
           cytoplasmic 1  (Asparagine--tRNA ligase 1) (AsnRS 1) ,
           partial (20%)
          Length = 487

 Score = 34.7 bits (78), Expect = 0.042
 Identities = 15/41 (36%), Positives = 24/41 (57%)
 Frame = +2

Query: 498 ETFCTALEYGLPPTAGWGLGIDRLTMLLTDSQNIKEVLLFP 538
           E +     YG    AG+GLG +R+ +  T  +NI++V+ FP
Sbjct: 194 EWYLDLRRYGTVKHAGFGLGFERMILFATGIENIRDVIPFP 316


>AW720050 
          Length = 436

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 24/67 (35%), Positives = 32/67 (46%), Gaps = 1/67 (1%)
 Frame = -2

Query: 460 HELANAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDETFCTA-LEYGLPPTAGWGLGI 518
           HEL + + +   PVV+RQ    Q+     G +    LD+    +  E GL P    GLG 
Sbjct: 417 HELED-HQQQQHPVVERQSHEPQVL----GSEHHHELDQDQLRSHRELGLEPLDHHGLGQ 253

Query: 519 DRLTMLL 525
           DRL  LL
Sbjct: 252 DRLEALL 232


>TC16617 similar to UP|Q9FJY6 (Q9FJY6) Apospory-associated protein C-like
           protein, partial (42%)
          Length = 551

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 309 YMAYKDYYDLMEITENMLSGMVYELTKGSYKIKYHADGLDKDPIE 353
           Y  YK++  + E+  + L    Y+     Y ++ HA  LD+D  E
Sbjct: 473 YHDYKEHPSVPELQRDFLPHFQYQQQSNPYFVQTHAAELDQDQTE 339


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.319    0.136    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,597,076
Number of Sequences: 28460
Number of extensions: 105150
Number of successful extensions: 447
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of query: 560
length of database: 4,897,600
effective HSP length: 95
effective length of query: 465
effective length of database: 2,193,900
effective search space: 1020163500
effective search space used: 1020163500
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)