TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148819.6 - phase: 0 
         (156 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC10133 similar to UP|Q9LSS5 (Q9LSS5) Myosin heavy chain-like, p...    28  0.55
TC12218                                                                28  0.71
AV778674                                                               28  0.93
TC15439 weakly similar to UP|Q9LQ62 (Q9LQ62) T30E16.9, partial (6%)    26  2.7
TC9168 similar to GB|AAP21369.1|30102902|BT006561 At4g19200 {Ara...    26  3.5
TC8706 weakly similar to UP|Q7X9D9 (Q7X9D9) ABRH1 (Fragment), pa...    26  3.5
TC9268 similar to UP|Q9LHE6 (Q9LHE6) Genomic DNA, chromosome 3, ...    26  3.5
BP066840                                                               26  3.5
BI420850                                                               25  4.6
BP052312                                                               25  4.6
BP068856                                                               25  4.6
TC8668 similar to UP|Q8W4Q4 (Q8W4Q4) AT4g24800/F6I7_10, partial ...    25  6.0

>TC10133 similar to UP|Q9LSS5 (Q9LSS5) Myosin heavy chain-like, partial
           (34%)
          Length = 1827

 Score = 28.5 bits (62), Expect = 0.55
 Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 22/160 (13%)
 Frame = +1

Query: 19  YNEKIARLEAQVKESLHEKASYEATISQLHGDIAAHKNHMQILANRLDQVHFEVE----- 73
           + E  A+ +  V E+L +  + + T+  L GD+A   +  + +A  LDQ   +V      
Sbjct: 520 FKEFEAQAQGLVSETLLQLETAKRTVEILRGDVAKSVDGYKSIALELDQSRAKVNTLEVL 699

Query: 74  ---------SKYSSEIRDLKDCLMAEQEEKNDLNRKMQLLEKELLLFKAKMVDQQQEMTS 124
                    +   +   DL D   ++  E    + K  +      +  A++  Q++++ S
Sbjct: 700 VEKLNPDFINNNCNNSGDLVDGHRSDHVEAEICSLKSDVGRLRSAVETAEIKYQEEQIRS 879

Query: 125 NWQVETLKQKIMKLRKEN--------EVLKRKFSHIEEGK 156
             Q+    + + +++ E+          LKRK + IEE K
Sbjct: 880 TVQIRNAYELMEQIKSESGQKECEFEAELKRKKADIEELK 999


>TC12218 
          Length = 737

 Score = 28.1 bits (61), Expect = 0.71
 Identities = 24/98 (24%), Positives = 46/98 (46%)
 Frame = +2

Query: 13  KLLEEEYNEKIARLEAQVKESLHEKASYEATISQLHGDIAAHKNHMQILANRLDQVHFEV 72
           KL  ++ NE+   L + ++     K    A IS     +   +N     A +L +++ ++
Sbjct: 293 KLRRDKLNERFLELSSILEPGRQPKTDKAAIISDAVRVVTQLRNE----AEKLKEMNNDL 460

Query: 73  ESKYSSEIRDLKDCLMAEQEEKNDLNRKMQLLEKELLL 110
           + K    I++LK      ++EKN L    + LEK++ L
Sbjct: 461 QEK----IKELKAEKNEIRDEKNKLKLDKEKLEKKVKL 562


>AV778674 
          Length = 606

 Score = 27.7 bits (60), Expect = 0.93
 Identities = 28/101 (27%), Positives = 45/101 (43%), Gaps = 18/101 (17%)
 Frame = +3

Query: 74  SKYSSEIRD--LKDCLMAEQEEKNDLNRKMQLLEKEL--LLFKAKMVDQQQEMTSNWQVE 129
           SK   EI+   L     AEQ  K +++ ++Q LEK +  L  + K   + + M  N +++
Sbjct: 87  SKQVDEIKGKRLTSDTTAEQAMKEEMDTRIQTLEKTVARLRDEVKKEREDKNMERNRRLK 266

Query: 130 T--------------LKQKIMKLRKENEVLKRKFSHIEEGK 156
           T               KQ I +L +  E LKR    +E+ K
Sbjct: 267 TEKAIKDSYNNVEQEKKQFINELERHKEALKRLSDEVEKLK 389


>TC15439 weakly similar to UP|Q9LQ62 (Q9LQ62) T30E16.9, partial (6%)
          Length = 580

 Score = 26.2 bits (56), Expect = 2.7
 Identities = 15/48 (31%), Positives = 25/48 (51%)
 Frame = +3

Query: 94  KNDLNRKMQLLEKELLLFKAKMVDQQQEMTSNWQVETLKQKIMKLRKE 141
           KNDL  + + LE+ELLL K    D++  +   +   + K   +  +KE
Sbjct: 156 KNDLTERCESLERELLLLK----DERDSLLLKFSESSEKLATVSRQKE 287


>TC9168 similar to GB|AAP21369.1|30102902|BT006561 At4g19200 {Arabidopsis
           thaliana;}, partial (12%)
          Length = 682

 Score = 25.8 bits (55), Expect = 3.5
 Identities = 22/79 (27%), Positives = 34/79 (42%), Gaps = 5/79 (6%)
 Frame = -3

Query: 6   QGHRRALKLLEEEYNEKIARLEAQVKESLHEKASYEATISQLH----GDIAAHK-NHMQI 60
           Q HR   ++LEE  + +I  LE       H  A +   ++Q H    G +  H+ +H  +
Sbjct: 350 QHHRHCCRMLEEPEHNQIDHLE-------HHMAGHHTLVAQHHHKVDGKVDTHQFDHSLL 192

Query: 61  LANRLDQVHFEVESKYSSE 79
           L      V   VE   +SE
Sbjct: 191 LC*VTVIVRIPVEYHLASE 135


>TC8706 weakly similar to UP|Q7X9D9 (Q7X9D9) ABRH1 (Fragment), partial
           (49%)
          Length = 1084

 Score = 25.8 bits (55), Expect = 3.5
 Identities = 13/46 (28%), Positives = 23/46 (49%), Gaps = 1/46 (2%)
 Frame = +1

Query: 15  LEEEYNEKIARLE-AQVKESLHEKASYEATISQLHGDIAAHKNHMQ 59
           +EEEYN ++A+L   +  E   +K      + + H +    KN M+
Sbjct: 628 IEEEYNNRLAKLRLVETDEMRKQKVEELQALERAHLEYLHMKNRME 765


>TC9268 similar to UP|Q9LHE6 (Q9LHE6) Genomic DNA, chromosome 3, P1 clone:
           MZE19, partial (30%)
          Length = 805

 Score = 25.8 bits (55), Expect = 3.5
 Identities = 19/62 (30%), Positives = 28/62 (44%), Gaps = 3/62 (4%)
 Frame = -3

Query: 52  AAHKNHMQILANRLDQVHFEVESKY---SSEIRDLKDCLMAEQEEKNDLNRKMQLLEKEL 108
           A H   +++    L  +H  VE  +   S  +RD + C    Q   N  N K+ L+EKE 
Sbjct: 242 ARHGGRVELAL*GLVGIHLVVEMAWYIASE*VRDEERCTQLTQSIYNGKN*KVILIEKEK 63

Query: 109 LL 110
            L
Sbjct: 62  CL 57


>BP066840 
          Length = 471

 Score = 25.8 bits (55), Expect = 3.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 48 HGDIAAHKNHMQILANRLDQVHFEVE 73
          HG     +N + I  NR+ Q+HF VE
Sbjct: 84 HGKYTX*RNRLYISFNRIIQIHFLVE 7


>BI420850 
          Length = 419

 Score = 25.4 bits (54), Expect = 4.6
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -1

Query: 96  DLNRKMQLLEKELLLFKAKMVDQQQEMTSNWQVETLKQKIMKLRKENE 143
           DLNRK      +L  F   + D   E+  NW  +       KL+ ENE
Sbjct: 167 DLNRK*TTPHSDLFTFHCPIRDSSSEIERNWN*K------WKLKFENE 42


>BP052312 
          Length = 511

 Score = 25.4 bits (54), Expect = 4.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 35  HEKASYEATISQLHGDIAAHKNHMQ 59
           HEK SY  T SQ H   ++ ++H+Q
Sbjct: 320 HEK*SYTGTKSQTHNSHSSLEHHVQ 394


>BP068856 
          Length = 427

 Score = 25.4 bits (54), Expect = 4.6
 Identities = 14/39 (35%), Positives = 18/39 (45%)
 Frame = +1

Query: 76  YSSEIRDLKDCLMAEQEEKNDLNRKMQLLEKELLLFKAK 114
           Y  EIR L  C++   EE      +   L K   +FKAK
Sbjct: 187 YRKEIRSLAKCILGTTEESTGAEIRKNYLTK---MFKAK 294


>TC8668 similar to UP|Q8W4Q4 (Q8W4Q4) AT4g24800/F6I7_10, partial (39%)
          Length = 1216

 Score = 25.0 bits (53), Expect = 6.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 124 SNWQVETLKQKIMKLRKENE 143
           + W VE  K KIMKL +E E
Sbjct: 507 TGWAVEDAKDKIMKLLEEYE 566


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.313    0.127    0.334 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,891,635
Number of Sequences: 28460
Number of extensions: 16967
Number of successful extensions: 64
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of query: 156
length of database: 4,897,600
effective HSP length: 83
effective length of query: 73
effective length of database: 2,535,420
effective search space: 185085660
effective search space used: 185085660
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 51 (24.3 bits)