BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148817.11 - phase: 0
(276 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC11154 weakly similar to UP|Q9LQ75 (Q9LQ75) T1N6.22 protein, pa... 205 3e-74
TC16190 weakly similar to UP|Q9LQ75 (Q9LQ75) T1N6.22 protein, pa... 171 2e-43
BP028509 157 1e-39
BP084345 114 2e-29
BP049500 119 6e-28
BP039038 116 5e-27
TC15724 similar to UP|Q9LHT0 (Q9LHT0) Short chain alcohol dehydr... 58 2e-09
BP047669 53 6e-08
TC17111 weakly similar to GB|AAL99238.1|22651517|AY082345 short-... 52 8e-08
TC19154 similar to UP|AAS38575 (AAS38575) Short-chain dehydrogen... 51 2e-07
BP037319 50 3e-07
TC17651 weakly similar to UP|Q8KBL5 (Q8KBL5) Oxidoreductase, sho... 49 9e-07
BP058211 47 4e-06
TC9483 similar to UP|Q9FK50 (Q9FK50) Brn1-like protein, partial ... 44 4e-05
TC16362 similar to UP|HCD2_HUMAN (Q99714) 3-hydroxyacyl-CoA dehy... 42 9e-05
TC16041 similar to UP|P93697 (P93697) CPRD12 protein, partial (60%) 42 9e-05
BI419732 42 1e-04
TC16042 weakly similar to UP|Q8H0D9 (Q8H0D9) Alcohol dehydroge, ... 41 2e-04
TC9023 weakly similar to UP|Q9FXD7 (Q9FXD7) F12A21.14, partial (... 41 2e-04
BI419421 37 0.004
>TC11154 weakly similar to UP|Q9LQ75 (Q9LQ75) T1N6.22 protein, partial (68%)
Length = 833
Score = 205 bits (522), Expect(2) = 3e-74
Identities = 97/166 (58%), Positives = 129/166 (77%)
Frame = +3
Query: 111 EKCLKTNFYGVERVTEALVPLLQLSTSPTIVNVSSRAGLLKNISNEWARIVFNDIENLTK 170
E+CL+TN+YG + TE+L+PLL LS SP IVNVSS G L+ + EWA+ VF+D++NLT+
Sbjct: 309 EECLQTNYYGAKITTESLLPLLHLSDSPRIVNVSSSLGQLECVKKEWAKGVFSDVDNLTE 488
Query: 171 EKIDEVLKEFEKDYKEGSLEIKDWPTFASAYTMSKAALNAYTRIMAKKYPHFHINSVCPG 230
E +D VLK F KD+++GSLE K WP SAY +SKAA+NAYTRI+A+KYP F INSVCPG
Sbjct: 489 ETVDGVLKRFLKDFQQGSLESKGWPKIFSAYIVSKAAMNAYTRILARKYPTFCINSVCPG 668
Query: 231 FVKTDMNNNIGNLSIDEGVETPLMLALWSNNGPSGCFFNKGEVISF 276
FVKTD+ N G L+++EG +P+ LAL+ N PSG F+++GEV+ F
Sbjct: 669 FVKTDITANNGLLTVEEGAASPVRLALFPNGSPSGLFYHRGEVLPF 806
Score = 89.7 bits (221), Expect(2) = 3e-74
Identities = 47/75 (62%), Positives = 58/75 (76%)
Frame = +2
Query: 30 VVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLDVDDPASVASLASFIKTMFGKLDIL 89
+ VVLTAR+E+RGL+A+E LK+ SD VVFHQLDV D AS ASLA F+K+ FGKLDIL
Sbjct: 2 IKVVLTARDEKRGLQALETLKDS-GLSDLVVFHQLDVADAASAASLADFVKSKFGKLDIL 178
Query: 90 VNNAGVPGGKLIDGD 104
VNNAG+ G + D +
Sbjct: 179 VNNAGIGGAVIKDNN 223
>TC16190 weakly similar to UP|Q9LQ75 (Q9LQ75) T1N6.22 protein, partial (41%)
Length = 1221
Score = 171 bits (432), Expect = 2e-43
Identities = 85/145 (58%), Positives = 109/145 (74%)
Frame = +1
Query: 132 LQLSTSPTIVNVSSRAGLLKNISNEWARIVFNDIENLTKEKIDEVLKEFEKDYKEGSLEI 191
L LS SP IVNVSS G L+ + N WA+ V +D +NLT+E +D VLK+F +D+++GSLE
Sbjct: 4 LHLSDSPRIVNVSSFLGKLECVPNGWAKGVLSDADNLTEETVDGVLKKFLQDFQDGSLEG 183
Query: 192 KDWPTFASAYTMSKAALNAYTRIMAKKYPHFHINSVCPGFVKTDMNNNIGNLSIDEGVET 251
K WP SAY MSKAA+NAYTRI+A+KYP F INSVCPG+VKTD+ N G L+++EG T
Sbjct: 184 KGWPKIFSAYIMSKAAMNAYTRILARKYPTFCINSVCPGWVKTDITANNGLLTVEEGAAT 363
Query: 252 PLMLALWSNNGPSGCFFNKGEVISF 276
P+ LAL N PSG F+++GEV SF
Sbjct: 364 PVRLALLPNGSPSGLFYHRGEVSSF 438
>BP028509
Length = 551
Score = 157 bits (398), Expect = 1e-39
Identities = 79/140 (56%), Positives = 101/140 (71%)
Frame = -3
Query: 137 SPTIVNVSSRAGLLKNISNEWARIVFNDIENLTKEKIDEVLKEFEKDYKEGSLEIKDWPT 196
SP IVNVSS G L+ + N WA+ V +D++NLT+E +D VLK F KD+++GSLE K WP
Sbjct: 546 SPRIVNVSSSLGKLECVPNGWAKGVLSDVDNLTEEAVDGVLKRFLKDFQQGSLESKGWPK 367
Query: 197 FASAYTMSKAALNAYTRIMAKKYPHFHINSVCPGFVKTDMNNNIGNLSIDEGVETPLMLA 256
SAY MSKAA+NAYTRI+A+KYP F INSVC G+ KTD+ N G L+ +EG +P+ LA
Sbjct: 366 TLSAYIMSKAAMNAYTRILARKYPTFCINSVCXGYCKTDITVNNGFLTAEEGAASPVRLA 187
Query: 257 LWSNNGPSGCFFNKGEVISF 276
L PSG F+ KG+V SF
Sbjct: 186 LLPLGSPSGLFYYKGDVSSF 127
>BP084345
Length = 366
Score = 114 bits (284), Expect(2) = 2e-29
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = -3
Query: 166 ENLTKEKIDEVLKEFEKDYKEGSLEIKDWPTFASAYTMSKAALNAYTRIMAKKYPHFHIN 225
+NLT+E +D VLK+F KD+++GSLE K WP SAY MSKAA+NAYTRI+A+KY F IN
Sbjct: 364 DNLTEEAVDGVLKKFLKDFQQGSLESKGWPKVFSAYIMSKAAMNAYTRILARKYTTFCIN 185
Query: 226 SVCPGFVKTDMNNNIGNLSIDEG 248
SVCPG+VKTD+ NN G L+++EG
Sbjct: 184 SVCPGYVKTDVTNNNGLLTVEEG 116
Score = 31.6 bits (70), Expect(2) = 2e-29
Identities = 14/26 (53%), Positives = 18/26 (68%)
Frame = -1
Query: 251 TPLMLALWSNNGPSGCFFNKGEVISF 276
+P+ LAL N PSG F+ +GEV SF
Sbjct: 108 SPVKLALLPNGSPSGLFYFRGEVSSF 31
>BP049500
Length = 518
Score = 119 bits (298), Expect = 6e-28
Identities = 60/103 (58%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
Frame = -3
Query: 171 EKIDEVLKEFEKDYKEGSLEIKDWPTFASAYTMSKAALNAYTRIMAKKYPHFHINSVCPG 230
EKIDE L E+ KD+KEGSLE + WP SAYT+SK ALNAY RI+A+KYP F IN+VCPG
Sbjct: 516 EKIDEFLNEYLKDFKEGSLEAQGWPHIMSAYTISKVALNAYPRILAQKYPSFCINAVCPG 337
Query: 231 FVKTDMNNNIGNLSIDEGVETPLMLALW-SNNGPSGCFFNKGE 272
+V+TD+N + G L+ DEG E + LAL + PSG FF + E
Sbjct: 336 YVQTDINYHTGLLTPDEGAEAAVRLALLPDGSSPSGPFFYRSE 208
>BP039038
Length = 538
Score = 116 bits (290), Expect = 5e-27
Identities = 72/151 (47%), Positives = 95/151 (62%), Gaps = 3/151 (1%)
Frame = +3
Query: 8 AVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLDVD 67
AVVTG N+GIG+ + K+LA G+ VVLTARN + G A+E L+ + + + F QLDV
Sbjct: 87 AVVTGGNRGIGFALVKRLAELGLNVVLTARNNQNGEAAMENLRAQ-GLAQNIHFLQLDVS 263
Query: 68 DPASVASLASFIKTMFG-KLDILVNNAGVPGGKLIDGDALLRKVEKCLKTNFYGVERVTE 126
DPAS+ + AS K FG LDILVNNAGV L + + E +KTNFYG + + E
Sbjct: 264 DPASITAFASSFKAQFGPTLDILVNNAGVSFNDLNENS--VDHAESVIKTNFYGPKLLIE 437
Query: 127 ALVPLLQLSTS--PTIVNVSSRAGLLKNISN 155
AL+PL + S+S I+NVSSR G L + N
Sbjct: 438 ALLPLFRSSSSFGTRILNVSSRLGSLNKMRN 530
>TC15724 similar to UP|Q9LHT0 (Q9LHT0) Short chain alcohol
dehydrogenase-like, partial (81%)
Length = 1014
Score = 58.2 bits (139), Expect = 2e-09
Identities = 65/233 (27%), Positives = 95/233 (39%), Gaps = 4/233 (1%)
Frame = +2
Query: 8 AVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLDVD 67
A+VTG +GIG+ + ++LA G V +RNE L A + E FS V D
Sbjct: 128 ALVTGGTRGIGHAVVEELAEFGATVYTCSRNEVE-LNACLKEWQEKGFS--VSGSVCDAS 298
Query: 68 DPASVASLASFIKTMF-GKLDILVNNAGVPGGK-LIDGDALLRKVEKCLKTNFYGVERVT 125
P L + + F GKL+ILVNN G K I+ A + K + TN ++
Sbjct: 299 SPPQREKLFELVASAFNGKLNILVNNVGTNIRKPTIEYTA--EEYSKLMSTNLDSAHHLS 472
Query: 126 EALVPLLQLSTSPTIVNVSSRAGLLKNISNEWARIVFNDIENLTKEKIDEVLKEFEKDYK 185
+ PLL+ S + +IV +SS A L S
Sbjct: 473 QLAYPLLKASGNGSIVFISSVAALAHVGS------------------------------- 559
Query: 186 EGSLEIKDWPTFASAYTMSKAALNAYTRIMAKKYPHFHI--NSVCPGFVKTDM 236
+ Y SKAA+N T+ +A ++ +I NSV P + KT +
Sbjct: 560 ------------GAVYAASKAAINQLTKYLACEWAKDNIRSNSVAPWYTKTSL 682
>BP047669
Length = 544
Score = 52.8 bits (125), Expect = 6e-08
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Frame = +1
Query: 6 RYAVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLD 65
+ A++TG GIG K G V++ ++ G+ + L+ F+ +++ D
Sbjct: 46 KVAIITGGASGIGAATAKLFVQHGAKVIIADIQDDLGMSLCKTLEPNFNN---IIYAHCD 216
Query: 66 VDDPASVASLASFIKTMFGKLDILVNNAGVPGGKLIDGDALLRKVEKCLK----TNFYG 120
V + + V + + +GKLDI+ NNAG+ G + ++L ++C K N YG
Sbjct: 217 VTNDSDVKNAVDMAVSKYGKLDIMYNNAGITGDLNL---SILASSDECFKRVFDVNVYG 384
>TC17111 weakly similar to GB|AAL99238.1|22651517|AY082345 short-chain
dehydrogenase/reductase {Arabidopsis thaliana;}, partial
(53%)
Length = 561
Score = 52.4 bits (124), Expect = 8e-08
Identities = 36/130 (27%), Positives = 58/130 (43%), Gaps = 5/130 (3%)
Frame = +2
Query: 6 RYAVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLD 65
+ A+VTG GIG I + ++G + + + G + E L +E + V F D
Sbjct: 95 KVALVTGGASGIGESIARLFHTNGAKICIADMQDNLGNQVCESLGDEAN----VCFLHCD 262
Query: 66 VDDPASVASLASFIKTMFGKLDILVNNAGVPGGKLID-GDALLRKVEKCLKTN----FYG 120
V + V + FG LDI+VNNAG+ G D + L +K N F+G
Sbjct: 263 VTEENDVRNAVDMTVAKFGTLDIIVNNAGISGAPCPDIRNVDLSDFDKVFNVNVKGVFHG 442
Query: 121 VERVTEALVP 130
++ ++P
Sbjct: 443 MKHAARIMIP 472
>TC19154 similar to UP|AAS38575 (AAS38575) Short-chain dehydrogenase Tic32,
partial (44%)
Length = 508
Score = 50.8 bits (120), Expect = 2e-07
Identities = 35/88 (39%), Positives = 48/88 (53%)
Frame = +2
Query: 8 AVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLDVD 67
AVVTGA+ GIG + LA GV V++ RN G + E + E + S V +LD+
Sbjct: 173 AVVTGASSGIGTETTRVLAKRGVHVIMGVRNTAAGKDVKETILKE-NPSAKVDAMELDLS 349
Query: 68 DPASVASLASFIKTMFGKLDILVNNAGV 95
SV AS K+ L+IL+NNAG+
Sbjct: 350 SMESVKKFASEYKSSGLPLNILINNAGI 433
>BP037319
Length = 526
Score = 50.4 bits (119), Expect = 3e-07
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
Frame = +2
Query: 6 RYAVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLD 65
+ AV+TG +GIG K A +G VV+ ++ G E + + D
Sbjct: 74 KVAVITGGARGIGAATAKLFAENGAHVVIADVLDDLGASVAESIGGR--------YIHCD 229
Query: 66 VDDPASVASLASFIKTMFGKLDILVNNAGVPGGKLIDGDAL-LRKVEKCLKTNFYG-VER 123
V + V S + + G +DI+ NNAG+P + L + +V + L N YG +
Sbjct: 230 VSKESDVESAINLAVSWKGHIDIMFNNAGIPDNEGRSISTLDMNRVNRVLSINLYGTIHG 409
Query: 124 VTEALVPLLQLSTSPTIVNVSSRAGLL 150
+ A +++ +I+ SS A +
Sbjct: 410 IKHAARAMIKAQKGGSIICTSSAAATM 490
>TC17651 weakly similar to UP|Q8KBL5 (Q8KBL5) Oxidoreductase, short-chain
dehydrogenase/reductase family, partial (12%)
Length = 599
Score = 48.9 bits (115), Expect = 9e-07
Identities = 28/86 (32%), Positives = 46/86 (52%)
Frame = +1
Query: 9 VVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLDVDD 68
++TG+ KGIGY + K+ +G V++ +R+ ER V+ + EF V + DV
Sbjct: 247 LITGSTKGIGYALAKEFLKAGDNVLICSRSYERVETTVQNFRAEFG-EQHVWGTKCDVRS 423
Query: 69 PASVASLASFIKTMFGKLDILVNNAG 94
V +L SF + +D+ +NNAG
Sbjct: 424 GEDVKNLVSFAQEKLKYIDLWINNAG 501
>BP058211
Length = 562
Score = 47.0 bits (110), Expect = 4e-06
Identities = 32/117 (27%), Positives = 55/117 (46%), Gaps = 3/117 (2%)
Frame = +3
Query: 8 AVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLDVD 67
+++TGA GIG K ++G V++ ++ G E + L F DV
Sbjct: 54 SMITGAASGIGKAAATKFINNGAKVIIADIQQKLGQETAKELGPN------ATFITCDVT 215
Query: 68 DPASVASLASFIKTMFGKLDILVNNAGVP---GGKLIDGDALLRKVEKCLKTNFYGV 121
+ +++ F + + +LDI+ NNAGVP G ++D D L ++ + N GV
Sbjct: 216 KESDISNAVEFAISEYKQLDIMYNNAGVPCRTPGSIVDLD--LASFDRVMDINVRGV 380
>TC9483 similar to UP|Q9FK50 (Q9FK50) Brn1-like protein, partial (51%)
Length = 549
Score = 43.5 bits (101), Expect = 4e-05
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 6 RYAVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLD 65
R A+VTG+++GIG I LAS G +V+ + +V N + + + D
Sbjct: 116 RVAIVTGSSRGIGREIAIHLASLGARLVINYTSNSDQANSVAAQINAGSATSRAITVKAD 295
Query: 66 VDDPASVASLASFIKTMF-GKLDILVNNAGV 95
V DP V SL + F + ILVN+AGV
Sbjct: 296 VSDPDQVKSLFDSAEQAFDSPVHILVNSAGV 388
>TC16362 similar to UP|HCD2_HUMAN (Q99714) 3-hydroxyacyl-CoA dehydrogenase
type II (Type II HADH) (Endoplasmic
reticulum-associated amyloid beta-peptide binding
protein) (Short-chain type dehydrogenase/reductase
XH98G2) , partial (7%)
Length = 613
Score = 42.4 bits (98), Expect = 9e-05
Identities = 45/151 (29%), Positives = 71/151 (46%), Gaps = 11/151 (7%)
Frame = +2
Query: 8 AVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLDVD 67
A++TG GIG + L+ V V++ ARN EA + + + + S V +LD+
Sbjct: 191 AIITGGASGIGLETARVLSLRKVHVIIAARNMNSAKEAKQLILQDNE-SARVDIMKLDL- 364
Query: 68 DPASVASLASFIKTMFG---KLDILVNNAGV---PGGKLIDGDALLRKVEKCLKTNFYGV 121
S+ S+ SF++ L+IL+NNAGV P DG +E TN G
Sbjct: 365 --CSLKSVRSFVENFIALGLPLNILINNAGVMFCPFQLSEDG------IEMQFATNHLGH 520
Query: 122 ERVTEALVPLLQLSTSPT-----IVNVSSRA 147
+T L+ ++ + T I+N+SS A
Sbjct: 521 FLLTNLLLDKMKQTAKATGIXGRIINLSSIA 613
>TC16041 similar to UP|P93697 (P93697) CPRD12 protein, partial (60%)
Length = 676
Score = 42.4 bits (98), Expect = 9e-05
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Frame = +2
Query: 6 RYAVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLD 65
+ A++TG GIG + + G VV+ ++ G L++ F +
Sbjct: 203 KVALITGGASGIGEATARLFSKHGAKVVIADIQDDLGHSVCRDLES-------ASFVHCN 361
Query: 66 VDDPASVASLASFIKTMFGKLDILVNNAGVPGGKLIDGDALLRKV----EKCLKTNFYGV 121
V V + + + GKLDI+ NNAG+ G I ++L E+ N +G
Sbjct: 362 VTKEDEVETAVNTTVSKHGKLDIMFNNAGISGDNNI---SILNNTKSDFEQVFSVNVFGA 532
Query: 122 ERVTEALVPLLQLSTSPTIVNVSSRAGLL 150
T+ ++ + +I+N +S +GL+
Sbjct: 533 FLGTKHAARVMVPARRGSIINTASVSGLI 619
>BI419732
Length = 534
Score = 41.6 bits (96), Expect = 1e-04
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 1/144 (0%)
Frame = +2
Query: 8 AVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLDVD 67
A+VTG +GIG+ I LA+ G V +R E + ++ +++ + V DV
Sbjct: 89 ALVTGGTRGIGHAIVNDLAAFGAAVHTCSRTESELTKCLQEWQSQGFLATGSV---CDVS 259
Query: 68 D-PASVASLASFIKTMFGKLDILVNNAGVPGGKLIDGDALLRKVEKCLKTNFYGVERVTE 126
P + T GKL I +NN G K + + + + N + +
Sbjct: 260 SRPQREKLMQEVASTFNGKLKIFINNVGTNFRK-PTVEYTAEEYSELMTVNLDSAFHLCQ 436
Query: 127 ALVPLLQLSTSPTIVNVSSRAGLL 150
PLL+ S +IV +SS AG++
Sbjct: 437 LAHPLLKASGVGSIVFISSVAGVV 508
>TC16042 weakly similar to UP|Q8H0D9 (Q8H0D9) Alcohol dehydroge, partial
(94%)
Length = 965
Score = 41.2 bits (95), Expect = 2e-04
Identities = 34/153 (22%), Positives = 66/153 (42%), Gaps = 8/153 (5%)
Frame = +2
Query: 6 RYAVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLD 65
+ A++TG GIG + + G VV+ ++ G + L++ F +
Sbjct: 107 KVALITGGASGIGEATARLFSKHGAQVVIADIQDDLGHSVCKDLES-------ASFVHCN 265
Query: 66 VDDPASVASLASFIKTMFGKLDILVNNAGVPGGKLIDGDALLR----KVEKCLKTN---- 117
V V + + + GKLDI+ NNAG+ G + ++L + E+ N
Sbjct: 266 VTKEDEVETAVNMAVSKHGKLDIMFNNAGISGN---NNTSILNNTKSEFEQVFSVNVSGA 436
Query: 118 FYGVERVTEALVPLLQLSTSPTIVNVSSRAGLL 150
F G + ++P + +I+N +S +G++
Sbjct: 437 FLGTKHAARVMIP----ARRGSIINTASTSGVI 523
>TC9023 weakly similar to UP|Q9FXD7 (Q9FXD7) F12A21.14, partial (13%)
Length = 1282
Score = 41.2 bits (95), Expect = 2e-04
Identities = 51/237 (21%), Positives = 100/237 (41%), Gaps = 6/237 (2%)
Frame = +2
Query: 7 YAVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLDV 66
+AV+TG+ GIG + +LAS G+ ++L RN + + +++++ ++ +
Sbjct: 170 WAVITGSTDGIGKAMSFELASQGLNLLLIGRNPTKLEATSKEIRDKYHVEVKILVLDMQY 349
Query: 67 DDPASVASLASFIKTMFG-KLDILVNNAGV--PGGKLI-DGDALLRKVEKCLKTNFYGVE 122
+ L ++ + G + ++VN+AG+ P + + + DA L ++ +K N G+
Sbjct: 350 VKGEEMGKL--IVEAIDGLDVGLVVNSAGLAYPYARFLHEVDAEL--MDAVVKVNVEGLT 517
Query: 123 RVTEALVPLLQLSTSPTIVNVSSRAGLLKNISNEWARIVFNDIENLTKEKIDEVLKEFEK 182
VT+A++P + IVN+ S
Sbjct: 518 WVTKAVLPGMIKKKKGAIVNIGS------------------------------------- 586
Query: 183 DYKEGSLEIKDWPTFASAYTMSKAALNAYTRIMAKKYPHFHINSVC--PGFVKTDMN 237
GS + + Y +KA L ++R ++ +Y H I+ C P FV T M+
Sbjct: 587 ----GSTFVLPSYPLVTLYAATKAYLAMFSRCISLEYKHHGIDIQCQIPLFVSTKMS 745
>BI419421
Length = 271
Score = 37.0 bits (84), Expect = 0.004
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +3
Query: 65 DVDDPASVASLASFIKTMFGKLDILVNNAGVP--GGKLIDGDALLRKVEKCLKTNFYGVE 122
DV + +S+++ + I+ G +DILVNNAG+ GG + D + + N GV
Sbjct: 30 DVANLSSISAAVAAIREELGAIDILVNNAGISKFGGFM---DLTPEEWTDIIDVNVKGVY 200
Query: 123 RVTEALVPLLQLSTSPTIVNVSS 145
A++P + S I+N+SS
Sbjct: 201 YTAGAVLPEMIERNSGDIINISS 269
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.137 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,232,930
Number of Sequences: 28460
Number of extensions: 49915
Number of successful extensions: 281
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of query: 276
length of database: 4,897,600
effective HSP length: 89
effective length of query: 187
effective length of database: 2,364,660
effective search space: 442191420
effective search space used: 442191420
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)
Medicago: description of AC148817.11