BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148755.5 + phase: 0
(569 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV767121 144 4e-35
AV780221 123 7e-29
BP041113 86 1e-17
TC13572 78 4e-17
AV418280 74 8e-14
AV428268 68 5e-12
AV780705 67 6e-12
AV427022 66 1e-11
TC14968 similar to UP|Q8TTE6 (Q8TTE6) Bacterial extracellular so... 64 7e-11
AV412895 61 6e-10
AV414139 58 5e-09
AU089120 57 6e-09
BP056597 57 1e-08
TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%) 56 1e-08
BP060613 54 5e-08
BP057427 49 2e-06
AU089037 47 6e-06
BP033775 35 9e-06
BP034765 46 1e-05
AV411435 45 2e-05
>AV767121
Length = 525
Score = 144 bits (363), Expect = 4e-35
Identities = 76/187 (40%), Positives = 106/187 (56%), Gaps = 2/187 (1%)
Frame = +2
Query: 123 LSSWNNKYLSSGGRLILLKSVLSSLPVYFLSFFKAPTGIISSIESIFKKKFWGGCEVSRK 182
LS W K +S GGR+ L++SVL++LP++FLSFFK P G+ S + + WGG E K
Sbjct: 2 LSKWKQKTVSFGGRIFLIQSVLTALPLFFLSFFKLPIGVGKSCVRLMRNFLWGGSENENK 181
Query: 183 IAWVKWDSVCLPMSQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGGM 242
IA VKW VC P GGLG++ L FN +LLGK WR L + + LW RV++A+
Sbjct: 182 IA*VKWTDVCKPKELGGLGIKDLFTFNKALLGK*RWRYLTEPDSLWRRVIEAQ------- 340
Query: 243 VKEGGRHSSRWWRMICNV--RDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLGDVPLK 300
+ S WW I ++ D G WF ++++VG G T FW ++WLG L
Sbjct: 341 -PDHYSCGSSWWNDILSLCPEDADG-----WFSSGLKKLVGEGDQTKFWSEDWLGSGLLS 502
Query: 301 FQFSRLF 307
+F RL+
Sbjct: 503 ARFRRLY 523
>AV780221
Length = 461
Score = 123 bits (309), Expect = 7e-29
Identities = 66/162 (40%), Positives = 93/162 (56%), Gaps = 3/162 (1%)
Frame = +3
Query: 137 LILLKSVLSSLPVYFLSFFKAPTG-IISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPM 195
L L++SVL +LP++ L FFK PTG +++ + F E +KIAWVKW +VC P
Sbjct: 3 LCLIRSVLIALPLFHLPFFKLPTGGFYTNVNN**DPFFGREVEGGKKIAWVKWSTVCRPK 182
Query: 196 SQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLKARYGEIGGMVKEGGRHSSRWWR 255
+GGLGV+ LG FN +LLGKW WR+L +++GLWY+VL +Y + +S WW
Sbjct: 183 DEGGLGVQNLGLFNKALLGKWRWRMLKERDGLWYKVLLIKY------KNAIPQSASSWWN 344
Query: 256 MICNV--RDGRGLLVGKWFDDNIRRVVGNGRNTFFWYDNWLG 295
+ + DG G W + R +G G FW +NWLG
Sbjct: 345 DLHSTCFEDGG----GGWMQRGLCRRIGEGTEVKFWNENWLG 458
>BP041113
Length = 503
Score = 86.3 bits (212), Expect = 1e-17
Identities = 57/169 (33%), Positives = 82/169 (47%), Gaps = 3/169 (1%)
Frame = +1
Query: 288 FWYDNWLGDVPLKFQFSRLFDLAVNKECSVEDMVRAGWEEGGGGW--VWRRRLLAWEEEG 345
FW ++W+G L+ ++ RLF+L+ K C + + GW G W WRR L+ E
Sbjct: 1 FWTEDWIGMGTLRDRYYRLFNLSKEKRCCILEC--GGWNHGVWTWKLSWRRALVGRELGW 174
Query: 346 VRECVNLLNNIVLQDNIQDKWRWLLDPILGYTVKGTYCFLTNMEGQVTSGVGFDVWHRRV 405
+ + L+ + L + ++DKW WL P YTV Y FL T + +W
Sbjct: 175 LELMMKDLSGVCLSEGVEDKWLWL--PGGTYTVNSAYSFLQAPTLADTDPIFATIWRTVA 348
Query: 406 PSKVSLFAWRLLQDRVATRTNLVRR-YVLQAADNFCVGGCGIPETVDHL 453
PS V FAWR L R+ T NL++R V+ A C G E+V HL
Sbjct: 349 PS-VKAFAWRCLLGRLPTYDNLIKRQVVVDPAMTVCKFCQGEVESVTHL 492
>TC13572
Length = 534
Score = 77.8 bits (190), Expect(2) = 4e-17
Identities = 46/160 (28%), Positives = 77/160 (47%), Gaps = 2/160 (1%)
Frame = -3
Query: 228 WYRVLKARYGEIGGMVKEGGRHSSRWWRMICNVRDGRGLLVGKWFDDNIRRVVGNGRNTF 287
W RV+ A+YG+ G + S WWR + G WF++ + +V+ +G +T
Sbjct: 478 WCRVVLAKYGD------GGCTNISSWWRDVQTAGGGEN----GWFEEGVHKVLRSGNHTR 329
Query: 288 FWYDNWLGDVPLKFQFSRLFDLAVNKECSVEDMVRAGWEEGGGGW--VWRRRLLAWEEEG 345
FW +NW G L+ ++ RL++L+ K S+++ GW +G W WRR L E +
Sbjct: 328 FWLENWTGVGILREKYYRLYNLSKLKWASIDEC--GGWSQGVWNWDFRWRRPLAGRELDW 155
Query: 346 VRECVNLLNNIVLQDNIQDKWRWLLDPILGYTVKGTYCFL 385
++ + + L + DKW W Y+V + FL
Sbjct: 154 LQALSLDIVRVPLLAGVPDKWVWKPSEDGSYSVNSAFIFL 35
Score = 26.9 bits (58), Expect(2) = 4e-17
Identities = 11/19 (57%), Positives = 12/19 (62%)
Frame = -1
Query: 209 NLSLLGKWCWRLLVDKNGL 227
N +LLGKW WRL N L
Sbjct: 534 NKALLGKWLWRLKTVPNSL 478
>AV418280
Length = 398
Score = 73.6 bits (179), Expect = 8e-14
Identities = 38/123 (30%), Positives = 60/123 (47%), Gaps = 2/123 (1%)
Frame = -2
Query: 446 IPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMTRGSHDYLK-- 503
+ E HLF C VW + WLGI S +F QF+ A R + L
Sbjct: 370 VEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITA---RNKNQRLGEL 200
Query: 504 IIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPL 563
IW+A VW++W +RN+ +F N A D +++ ++ S+ WL + F + ++W PL
Sbjct: 199 AIWIATVWSLWIQRNSIIFRNNALDHSYLLDLIQSRSWHWLKAKFCGFTYSLYEWKSCPL 20
Query: 564 FCM 566
C+
Sbjct: 19 ECL 11
>AV428268
Length = 429
Score = 67.8 bits (164), Expect = 5e-12
Identities = 45/147 (30%), Positives = 67/147 (44%), Gaps = 3/147 (2%)
Frame = +3
Query: 376 YTVKGTYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQA 435
Y+VK Y FL + +W +VPS +W++L +RV T+ NL RR V+
Sbjct: 6 YSVKSAYDFLHGCANAQWDNIFKLLWSVKVPSNAIALSWKVLINRVQTKVNLNRRGVV-- 179
Query: 436 ADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMT 495
N C E+ DHL C R+W + G+ VF HF+Q +
Sbjct: 180 ISNVCPLCSLDEESTDHLLFSCPIV*RIWSKISE*FGVFSVFPNDSHGHFLQHLG----S 347
Query: 496 RGSHDYLK---IIWLACVWAIWKERNN 519
GS ++ K +W+A V IW+ RN+
Sbjct: 348 CGSLNFRKRGWFVWIAAVVCIWQGRNS 428
>AV780705
Length = 524
Score = 67.4 bits (163), Expect = 6e-12
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = -2
Query: 94 PFMYLGLPI--GGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLILLKSVLSSLPVYF 151
P YLGLP G ++ W + +++ +L W L+ G+ +L+K+++ ++P Y
Sbjct: 493 PGHYLGLPAIWGRNKSHSLVW--IEEKVKEKLEGWKETLLNQAGKEVLIKAIIQAIPSYA 320
Query: 152 LSFFKAPTGIISSIESIFKKKFWGGCEVSRKIAWVKWDSVCLPMSQ--GGLGVRKLGEFN 209
++ P +S+ ++ FW + + + P+S+ GG+G R L N
Sbjct: 319 MTIVHFPKTFCNSLYALVAD-FWWKSQGEGAVEYTGAVGTK*PLSKEKGGVGFRDLRTQN 143
Query: 210 LSLLGKWCWRLLVDKNGLWYRVLKARY 236
L+ L + WR+L + LW RV+K+ Y
Sbjct: 142 LAFLARQAWRVLTNPEALWVRVMKSLY 62
>AV427022
Length = 429
Score = 66.2 bits (160), Expect = 1e-11
Identities = 34/132 (25%), Positives = 64/132 (47%)
Frame = +1
Query: 435 AADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGM 494
A + C C E+ HL C++ + Y WLG+ H +QF+++ G
Sbjct: 25 ALEAICPLCCLAEESGSHLLFSCSNSMLI*YECHAWLGVSTAQVSDPKVHLLQFSSI-GW 201
Query: 495 TRGSHDYLKIIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFG 554
++ IW++ +W+IW RN VFN D ++E++++ ++ WL S + F +
Sbjct: 202 SKAQKLGESAIWMSVLWSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRWLRSRLDDF*YS 381
Query: 555 FHDWWRYPLFCM 566
+++W P C+
Sbjct: 382 WYEWKSNPRICL 417
>TC14968 similar to UP|Q8TTE6 (Q8TTE6) Bacterial extracellular
solute-binding family 3 protein, partial (3%)
Length = 503
Score = 63.9 bits (154), Expect = 7e-11
Identities = 32/104 (30%), Positives = 49/104 (46%)
Frame = +1
Query: 463 VWYLVCHWLGIPCVFQGSVTQHFIQFTNLAGMTRGSHDYLKIIWLACVWAIWKERNNCVF 522
+W V +WLG+ V G+ H + F L + + D + +WLA VW +W RN VF
Sbjct: 91 IWCRVFNWLGVCFVCPGTPVDHLLSFAGLFLLAQ--KDGILSVWLAVVWHVWVGRNEAVF 264
Query: 523 NNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPLFCM 566
P I VKL + WL + F ++W+ P+ C+
Sbjct: 265 REGVFLPECIFYLVKLKVWEWLKARSCHFTHATYEWFNEPILCL 396
>AV412895
Length = 405
Score = 60.8 bits (146), Expect = 6e-10
Identities = 33/118 (27%), Positives = 55/118 (45%), Gaps = 1/118 (0%)
Frame = +1
Query: 375 GYTVKGTYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQ 434
G++V ++ FL + + V +W P + F WR+L R+ TR NL++R V+
Sbjct: 7 GFSVNSSFVFL*DQYLEEPDPVFN*IWMVPAPLNIKAFVWRVLLGRIQTRDNLLKRQVIH 186
Query: 435 AADNFCVGGCGI-PETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFTNL 491
A + CG+ E+ HL C +WY WLG+ H +QF+++
Sbjct: 187 NALDAICPLCGLAEESGSHLLFSCAESMLIWYECFAWLGVSTAQVSDPKVHLLQFSSI 360
>AV414139
Length = 309
Score = 57.8 bits (138), Expect = 5e-09
Identities = 32/95 (33%), Positives = 42/95 (43%), Gaps = 2/95 (2%)
Frame = -2
Query: 325 WEEGGGGWV--WRRRLLAWEEEGVRECVNLLNNIVLQDNIQDKWRWLLDPILGYTVKGTY 382
W G W WRR L E+ + + L + LQ +D+W+W LD YTV+ Y
Sbjct: 290 WHNGVWEWEFRWRRELSVREQRQEADLIQALAGVCLQQGTEDRWKWTLDTEDIYTVRSAY 111
Query: 383 CFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWRLL 417
L + S V VW PS + F WRLL
Sbjct: 110 *LLLDPIADSDSEVYEKVWVGIAPSNANAFVWRLL 6
>AU089120
Length = 586
Score = 57.4 bits (137), Expect = 6e-09
Identities = 43/138 (31%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Frame = +2
Query: 427 LVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFI 486
L RR ++Q +FC+ E++ HLF +C +W V WL V HFI
Sbjct: 8 LKRRRIIQTLSSFCLHS---EESIPHLFFRCFQSWNLWSSVHRWLVFTVVTPEEGKMHFI 178
Query: 487 QFTNLAGMTRGSHDYLKIIWLACVWAIWKERNNCVFN--------NLASDPLSIVERVKL 538
F + R + L IWL+ +W IW RN VFN D +SIV K
Sbjct: 179 MF*DYYS-GRDIKNGLGFIWLSTIWFIWHLRNKVVFNGRCFRLVRGFRFDSISIVAMAKR 355
Query: 539 FS--FLWLSSNVASFPFG 554
S ++ + V PFG
Sbjct: 356 KSERVMFFAL*VVFQPFG 409
Score = 30.4 bits (67), Expect = 0.81
Identities = 12/39 (30%), Positives = 20/39 (50%)
Frame = +3
Query: 528 DPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPLFCM 566
D L ++ ++ S+LWL V F ++W PL C+
Sbjct: 300 D*LGALDSIQYRSWLWLKGKVKGLCFSLYEWSSNPLVCL 416
>BP056597
Length = 414
Score = 56.6 bits (135), Expect = 1e-08
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +3
Query: 303 FSRLFDLAVNKECSVEDMVRAGWEEGGGGWVWRRRLLAWEEEGVRECV-------NLLNN 355
F LF ++ + C + +M W E WVW +W+ E V ++++
Sbjct: 9 FDSLFLISNQQNCKIVEM--GHWLENK--WVWD---FSWKNPISGEDVLKLGVMKQIVSS 167
Query: 356 IVLQDNIQDKWRWLLDPILGYTVKGTYCFLTNMEGQVTSGVGFDVWHRRVPSKVSLFAWR 415
L + +D W W+L+ Y+VK Y L+ ++ + V +W PS WR
Sbjct: 168 FSLINGKKDTWVWILEGDGQYSVKSAYDLLSGLDTTIGISVFSKLWKACAPSNAVALGWR 347
Query: 416 LLQDRVATRTNLVRRYV 432
+ DR+ T+ NL RR+V
Sbjct: 348 VFLDRIQTKDNLSRRHV 398
>TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%)
Length = 912
Score = 56.2 bits (134), Expect = 1e-08
Identities = 38/124 (30%), Positives = 64/124 (50%)
Frame = -3
Query: 24 LSHLQFADDTLIIGEKSWLNVRTIRAVLLLLEKVSGLKVNFNKSMVTGVNISTSWLSEAA 83
+SHL FAD+ ++ ++ I VL + + +SGL N KS V + + + ++
Sbjct: 373 ISHLCFADNLMVFSNGYLESIAIINNVLHIFQHLSGLTPNPAKSEVF-ILVKETTKNQIT 197
Query: 84 AVLNCKTGLIPFMYLGLPIGGDERKLCFWKPVLDRISARLSSWNNKYLSSGGRLILLKSV 143
+L K G +P LG+P + K K ++DR ++L W + LS GRL L+ S+
Sbjct: 196 NMLGYKEGKLPVR*LGVPQLTTKLKASDCKVLVDRKPSKLQHWTGRSLSYAGRLQLINSI 17
Query: 144 LSSL 147
L S+
Sbjct: 16 LFSM 5
>BP060613
Length = 378
Score = 54.3 bits (129), Expect = 5e-08
Identities = 32/101 (31%), Positives = 51/101 (49%), Gaps = 3/101 (2%)
Frame = +1
Query: 174 WGGCEVSRKIAWVKWDSVCLPMSQGGLGVRKLGEFNLSLLGKWCWRLLVDKNGLWYRVLK 233
W + +R + W KWD + +GGLG + N +LL K WR+L + + LW ++LK
Sbjct: 46 WWSSKGTRGVHWRKWDLLTELKDEGGLGFKDFEIQNQALLAKQAWRILHNPDALWVQILK 225
Query: 234 ARYGEIGGMVKEGGRHSSRW-WRMICNVRDGRGLLV--GKW 271
A Y ++ R + W W + + GR LL+ G+W
Sbjct: 226 ALYFPHHDFLQTTKRTGASWVWSSLLH---GRELLLKQGQW 339
>BP057427
Length = 480
Score = 48.9 bits (115), Expect = 2e-06
Identities = 20/65 (30%), Positives = 36/65 (54%)
Frame = -1
Query: 505 IWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPLF 564
IW+A + +IW RN+ +F D +V++++ S+ WL + V F + +W PL
Sbjct: 399 IWVAALASIWYSRNSLIFKGEELDFQRLVDQIQTKSWSWLKAKVTGFSYSLIEWKSQPLS 220
Query: 565 CMGIL 569
C+ I+
Sbjct: 219 CLDII 205
>AU089037
Length = 245
Score = 47.4 bits (111), Expect = 6e-06
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -1
Query: 400 VWHRRVPSKVSLFAWRLLQDRVATRTNLVRRYVLQAADNFCVGGCG-IPETVDHLFIQC 457
+W PS FAWRL+ DRV TR NL RR V+Q ++ C E+ HLF C
Sbjct: 191 LWKVPAPSNAVSFAWRLILDRVQTRGNLRRRQVIQQSEEALCPMCSQCEESSSHLFFSC 15
>BP033775
Length = 530
Score = 34.7 bits (78), Expect(2) = 9e-06
Identities = 14/52 (26%), Positives = 26/52 (49%)
Frame = -2
Query: 517 RNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPLFCMGI 568
RN+ +FN + ++V+ +K ++ WL F + + W P C+GI
Sbjct: 394 RNDVLFNGKTINSEAVVDLIKFKAWKWLQCKTKDFSYSSYAWNWNPCICLGI 239
Score = 31.6 bits (70), Expect(2) = 9e-06
Identities = 15/51 (29%), Positives = 24/51 (46%)
Frame = -1
Query: 470 WLGIPCVFQGSVTQHFIQFTNLAGMTRGSHDYLKIIWLACVWAIWKERNNC 520
WLG+ V + +HF Q + + GS + +W A +W IW + C
Sbjct: 530 WLGVITVQEEDPRRHFDQHGSTLVQSLGSGWWT--VWCAGIWTIWDTQKRC 384
>BP034765
Length = 506
Score = 46.2 bits (108), Expect = 1e-05
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -2
Query: 504 IIWLACVWAIWKERNNCVFNNLASDPLSIVERVKLFSFLWLSSNVASFPFGFHDWWRYPL 563
+I A WA+W+ RN VFN SI ++ +L WLS+ F F ++W P+
Sbjct: 505 LI*FAMAWALWEHRNWIVFNGGLLQEDSIFDKAQLKVCQWLSAKGKDFHFSMYEWLSQPI 326
Query: 564 FCM 566
C+
Sbjct: 325 LCL 317
>AV411435
Length = 426
Score = 45.4 bits (106), Expect = 2e-05
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Frame = +3
Query: 363 QDKWRWLLDPILGYTVKGTY----------CFLTNMEGQVTSGVGFDVWHRRVPSKVSLF 412
+D+ W P Y+VK Y L + +S + +W +VP KV F
Sbjct: 36 EDRLFWPFIPSGEYSVKSGYRAVKATQFNLSNLASSSSHPSSFLWHTIWGAQVPKKVRSF 215
Query: 413 AWRLLQDRVATRTNLVRRYVLQAADNFCVGGCGIPETVDHLFIQCTSFGRVWY 465
WR + + + NL RR + D+FC PE ++H + C VW+
Sbjct: 216 LWRAANNAIPVKRNLKRRNM--GRDDFCPICNKGPEDINHALLACEWTRAVWF 368
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.326 0.142 0.483
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,075,199
Number of Sequences: 28460
Number of extensions: 255915
Number of successful extensions: 1911
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 1853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of query: 569
length of database: 4,897,600
effective HSP length: 95
effective length of query: 474
effective length of database: 2,193,900
effective search space: 1039908600
effective search space used: 1039908600
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC148755.5