BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148755.12 - phase: 0
(440 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AW720189 56 1e-08
BP055186 52 2e-07
AV421861 52 2e-07
BF177720 47 6e-06
TC19218 32 0.21
AV407282 32 0.21
TC17706 similar to GB|AAM98108.1|22655034|AY139802 At3g54020/F5K... 32 0.21
TC9459 similar to AAQ23982 (AAQ23982) Transcription factor Rap21... 32 0.27
TC15166 similar to GB|AAK28312.1|13506739|AF224702 WRKY DNA-bind... 32 0.27
BP040333 31 0.46
BP065897 31 0.46
TC17205 weakly similar to PIR|S50830|S50830 Machado-Joseph disea... 30 0.61
BP082711 30 0.79
TC14860 similar to UP|TPIS_COPJA (P21820) Triosephosphate isomer... 30 0.79
TC11336 similar to UP|Q8S9A5 (Q8S9A5) Glucosyltransferase like p... 30 0.79
BP058026 30 1.0
BP055028 29 1.3
TC12971 similar to GB|AAN73294.1|25141199|BT002297 At5g12010/F14... 29 1.8
TC15953 similar to UP|B2_DAUCA (P37707) B2 protein, partial (71%) 28 2.3
>AW720189
Length = 505
Score = 55.8 bits (133), Expect = 1e-08
Identities = 21/49 (42%), Positives = 29/49 (58%)
Frame = +3
Query: 230 GRAIFDWANGDVFDGCMSNGLRHGFGVYRFANGDVYIGNWKKDKMDGTG 278
G+ W NGD F+G NG+ HG GVY +++G Y+G W + DG G
Sbjct: 6 GKGTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKG 152
Score = 51.2 bits (121), Expect = 3e-07
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +3
Query: 57 TGKGLFIQPSGDKYEGEFFGNRRHGNGTQTYKNGGSYVGNWKNDKKDGRG 106
+GKG +GD +EG + HG G T+ +GG YVG W KDG+G
Sbjct: 3 SGKGTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKG 152
Score = 50.1 bits (118), Expect = 7e-07
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +3
Query: 183 GLGIMSWDTGDVFYGCWSNGLAHGYGVYRSANGDVSIGNWKTWKMDDGRAIF 234
G G ++W GD F G W NG+ HG GVY ++G +G W T + DG+ F
Sbjct: 6 GKGTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTW-TRGLKDGKGTF 158
Score = 49.7 bits (117), Expect = 1e-06
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 276 GTGIMSWVVGDVFDGCWSNGLIHGYGVYRYANGDVDIGNFRSKLLHDNGKY 326
G G ++W+ GD F+G W NG++HG GVY +++G +G + L G +
Sbjct: 6 GKGTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTF 158
Score = 46.6 bits (109), Expect = 8e-06
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 26 GNIKDGLAHGKRKYTWSDGSIYVGDWVDGDKTGKGLF 62
G+ +G+ HG YTWSDG YVG W G K GKG F
Sbjct: 48 GSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTF 158
Score = 46.6 bits (109), Expect = 8e-06
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 104 GRGIETLANGDVFNGCWSNDFVYGYGVFRFANGDVYTGNWT 144
G+G T NGD F G W N ++G GV+ +++G Y G WT
Sbjct: 6 GKGTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWT 128
Score = 43.5 bits (101), Expect = 7e-05
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 81 GNGTQTYKNGGSYVGNWKNDKKDGRGIETLANGDVFNGCWSNDFVYGYGVF 131
G GT T+ NG S+ G+W N G G+ T ++G + G W+ G G F
Sbjct: 6 GKGTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTF 158
Score = 43.5 bits (101), Expect = 7e-05
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 253 GFGVYRFANGDVYIGNWKKDKMDGTGIMSWVVGDVFDGCWSNGLIHGYGVY 303
G G + NGD + G+W M G G+ +W G + G W+ GL G G +
Sbjct: 6 GKGTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTF 158
Score = 42.7 bits (99), Expect = 1e-04
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 127 GYGVFRFANGDVYTGNWTCSDVFDGCRSIALIHGFGVYRYANVGVYIGIWKKHERDGLG 185
G G + NGD + G+W ++HG GVY +++ G Y+G W + +DG G
Sbjct: 6 GKGTLTWLNGDSFEGSWLNG----------MMHGLGVYTWSDGGCYVGTWTRGLKDGKG 152
Score = 38.5 bits (88), Expect = 0.002
Identities = 16/51 (31%), Positives = 23/51 (44%)
Frame = +3
Query: 160 GFGVYRYANVGVYIGIWKKHERDGLGIMSWDTGDVFYGCWSNGLAHGYGVY 210
G G + N + G W GLG+ +W G + G W+ GL G G +
Sbjct: 6 GKGTLTWLNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTF 158
>BP055186
Length = 531
Score = 52.0 bits (123), Expect = 2e-07
Identities = 27/88 (30%), Positives = 42/88 (47%)
Frame = -1
Query: 251 RHGFGVYRFANGDVYIGNWKKDKMDGTGIMSWVVGDVFDGCWSNGLIHGYGVYRYANGDV 310
R G G + F NGD++ G+W+ D M G G + D + + G +G G + +GD
Sbjct: 528 RSGLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGDA 349
Query: 311 DIGNFRSKLLHDNGKYTHSNGTIYEGDW 338
GNF+ H +++GT Y W
Sbjct: 348 YFGNFKDGWRHGQFLCINADGTRYTEIW 265
Score = 47.8 bits (112), Expect = 4e-06
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -1
Query: 180 ERDGLGIMSWDTGDVFYGCWSNGLAHGYGVYRSANGDVSIGN-WKTWKMDDGRAIFDWAN 238
+R GLG + GD+F G W + + HG G + D N WK +GR F +
Sbjct: 531 KRSGLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGR--FYTKS 358
Query: 239 GDVFDGCMSNGLRHGFGVYRFANGDVYIGNWK 270
GD + G +G RHG + A+G Y W+
Sbjct: 357 GDAYFGNFKDGWRHGQFLCINADGTRYTEIWE 262
Score = 47.0 bits (110), Expect = 6e-06
Identities = 23/88 (26%), Positives = 44/88 (49%)
Frame = -1
Query: 35 GKRKYTWSDGSIYVGDWVDGDKTGKGLFIQPSGDKYEGEFFGNRRHGNGTQTYKNGGSYV 94
G + + +G ++ G W D GKG F + D++ F+ + +G G K+G +Y
Sbjct: 522 GLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGDAYF 343
Query: 95 GNWKNDKKDGRGIETLANGDVFNGCWSN 122
GN+K+ + G+ + A+G + W +
Sbjct: 342 GNFKDGWRHGQFLCINADGTRYTEIWEH 259
Score = 44.7 bits (104), Expect = 3e-05
Identities = 25/79 (31%), Positives = 38/79 (47%)
Frame = -1
Query: 230 GRAIFDWANGDVFDGCMSNGLRHGFGVYRFANGDVYIGNWKKDKMDGTGIMSWVVGDVFD 289
G F + NGD+F G + + HG G + F D + N+ K K +G G GD +
Sbjct: 522 GLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGDAYF 343
Query: 290 GCWSNGLIHGYGVYRYANG 308
G + +G HG + A+G
Sbjct: 342 GNFKDGWRHGQFLCINADG 286
Score = 40.8 bits (94), Expect = 4e-04
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = -1
Query: 127 GYGVFRFANGDVYTGNWTCSDVFDGCRSIALIHGFGVYRYANVGVYIGIWKKHERDGLGI 186
G G F F NGD++ G+W DV +HG G + + + + K + +G G
Sbjct: 522 GLGTFYFKNGDMFQGSWR-DDV---------MHGKGWFYFHTSDRWFANFWKGKANGEGR 373
Query: 187 MSWDTGDVFYGCWSNGLAHGYGVYRSANG 215
+GD ++G + +G HG + +A+G
Sbjct: 372 FYTKSGDAYFGNFKDGWRHGQFLCINADG 286
Score = 40.4 bits (93), Expect = 6e-04
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Frame = -1
Query: 160 GFGVYRYANVGVYIGIWKKHERDGLGIMSWDTGDVFYGCWSNGLAHGYGVYRSANGDVSI 219
G G + + N ++ G W+ G G + T D ++ + G A+G G + + +GD
Sbjct: 522 GLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGDAYF 343
Query: 220 GNWKT-WK--------MDDGRAIFDWANGDVFDGCMSNGLRHG 253
GN+K W+ D R W +G + D G R G
Sbjct: 342 GNFKDGWRHGQFLCINADGTRYTEIWEHGVLLDSKQFEG*RAG 214
Score = 40.0 bits (92), Expect = 8e-04
Identities = 19/68 (27%), Positives = 32/68 (46%)
Frame = -1
Query: 273 KMDGTGIMSWVVGDVFDGCWSNGLIHGYGVYRYANGDVDIGNFRSKLLHDNGKYTHSNGT 332
K G G + GD+F G W + ++HG G + + D NF + G++ +G
Sbjct: 531 KRSGLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGD 352
Query: 333 IYEGDWVD 340
Y G++ D
Sbjct: 351 AYFGNFKD 328
Score = 40.0 bits (92), Expect = 8e-04
Identities = 21/82 (25%), Positives = 37/82 (44%)
Frame = -1
Query: 18 YSDEGVYIGNIKDGLAHGKRKYTWSDGSIYVGDWVDGDKTGKGLFIQPSGDKYEGEFFGN 77
+ + ++ G+ +D + HGK + + + ++ G G+G F SGD Y G F
Sbjct: 504 FKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGDAYFGNFKDG 325
Query: 78 RRHGNGTQTYKNGGSYVGNWKN 99
RHG +G Y W++
Sbjct: 324 WRHGQFLCINADGTRYTEIWEH 259
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/100 (30%), Positives = 44/100 (44%)
Frame = -1
Query: 78 RRHGNGTQTYKNGGSYVGNWKNDKKDGRGIETLANGDVFNGCWSNDFVYGYGVFRFANGD 137
+R G GT +KNG + G+W++D G+G D + + G G F +GD
Sbjct: 531 KRSGLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGD 352
Query: 138 VYTGNWTCSDVFDGCRSIALIHGFGVYRYANVGVYIGIWK 177
Y GN+ DG R HG + A+ Y IW+
Sbjct: 351 AYFGNFK-----DGWR-----HGQFLCINADGTRYTEIWE 262
Score = 39.7 bits (91), Expect = 0.001
Identities = 22/88 (25%), Positives = 41/88 (46%)
Frame = -1
Query: 56 KTGKGLFIQPSGDKYEGEFFGNRRHGNGTQTYKNGGSYVGNWKNDKKDGRGIETLANGDV 115
++G G F +GD ++G + + HG G + + N+ K +G G +GD
Sbjct: 528 RSGLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGDA 349
Query: 116 FNGCWSNDFVYGYGVFRFANGDVYTGNW 143
+ G + + + +G + A+G YT W
Sbjct: 348 YFGNFKDGWRHGQFLCINADGTRYTEIW 265
Score = 29.3 bits (64), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (49%), Gaps = 1/38 (2%)
Frame = -1
Query: 18 YSDEG-VYIGNIKDGLAHGKRKYTWSDGSIYVGDWVDG 54
Y+ G Y GN KDG HG+ +DG+ Y W G
Sbjct: 369 YTKSGDAYFGNFKDGWRHGQFLCINADGTRYTEIWEHG 256
>AV421861
Length = 455
Score = 52.0 bits (123), Expect = 2e-07
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +1
Query: 12 RFKEMLYSDEGVYIGNIKDGLAHGKRKYTWSDGSIYVG 49
RF+E +S+ VYIG IK L HGK KYTWSDG++Y G
Sbjct: 340 RFEEKSFSNGDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
Score = 42.4 bits (98), Expect = 2e-04
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 305 YANGDVDIGNFRSKLLHDNGKYTHSNGTIYEG 336
++NGDV IG + L H GKYT S+GT+YEG
Sbjct: 358 FSNGDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
Score = 32.3 bits (72), Expect = 0.16
Identities = 15/32 (46%), Positives = 19/32 (58%)
Frame = +1
Query: 259 FANGDVYIGNWKKDKMDGTGIMSWVVGDVFDG 290
F+NGDVYIG K G G +W G V++G
Sbjct: 358 FSNGDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
Score = 30.8 bits (68), Expect = 0.46
Identities = 14/32 (43%), Positives = 21/32 (64%)
Frame = +1
Query: 236 WANGDVFDGCMSNGLRHGFGVYRFANGDVYIG 267
++NGDV+ G + L HG G Y +++G VY G
Sbjct: 358 FSNGDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
Score = 28.1 bits (61), Expect = 3.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 66 SGDKYEGEFFGNRRHGNGTQTYKNGGSYVG 95
+GD Y GE G HG G T+ +G Y G
Sbjct: 364 NGDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
Score = 26.6 bits (57), Expect = 8.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 85 QTYKNGGSYVGNWKNDKKDGRGIETLANGDVFNG 118
+++ NG Y+G K G+G T ++G V+ G
Sbjct: 352 KSFSNGDVYIGEIKGILPHGKGKYTWSDGTVYEG 453
>BF177720
Length = 509
Score = 47.0 bits (110), Expect = 6e-06
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = +1
Query: 15 EMLYSDEGVYIGNIKDGLAHGKRKYTWSDGSIYVGDWVDGDKTGKGLFIQPSGDKYEGEF 74
E+L S+ Y G + G Y WSD +Y G W G + G G P G YEGEF
Sbjct: 310 ELLLSNGESYSGTLFGNTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEF 489
Query: 75 FG 76
G
Sbjct: 490 SG 495
Score = 43.9 bits (102), Expect = 5e-05
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 237 ANGDVFDGCMSNGLRHGFGVYRFANGDVYIGNWKKDKMDGTGIMSWVVGDVFDGCWSNGL 296
+NG+ + G + G G Y +++ VY G W++ G G + W G V++G +S G
Sbjct: 322 SNGESYSGTLFGNTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEFSGGY 501
Query: 297 I 297
I
Sbjct: 502 I 504
Score = 42.7 bits (99), Expect = 1e-04
Identities = 20/71 (28%), Positives = 32/71 (44%)
Frame = +1
Query: 55 DKTGKGLFIQPSGDKYEGEFFGNRRHGNGTQTYKNGGSYVGNWKNDKKDGRGIETLANGD 114
D G + +G+ Y G FGN G+GT + + Y G W+ + G G G
Sbjct: 292 DSFSVGELLLSNGESYSGTLFGNTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGA 471
Query: 115 VFNGCWSNDFV 125
V+ G +S ++
Sbjct: 472 VYEGEFSGGYI 504
Score = 37.4 bits (85), Expect = 0.005
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +1
Query: 255 GVYRFANGDVYIGNWKKDKMDGTGIMSWVVGDVFDGCWSNGLIHGYGVYRYANGDVDIGN 314
G +NG+ Y G + +G G W V++G W G+ HG G R+ G V G
Sbjct: 307 GELLLSNGESYSGTLFGNTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGE 486
Query: 315 F 315
F
Sbjct: 487 F 489
Score = 34.3 bits (77), Expect = 0.042
Identities = 16/54 (29%), Positives = 27/54 (49%)
Frame = +1
Query: 285 GDVFDGCWSNGLIHGYGVYRYANGDVDIGNFRSKLLHDNGKYTHSNGTIYEGDW 338
G+ + G G+G Y +++ V G +R + H NGK G +YEG++
Sbjct: 328 GESYSGTLFGNTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEF 489
Score = 33.9 bits (76), Expect = 0.055
Identities = 22/77 (28%), Positives = 35/77 (44%)
Frame = +1
Query: 126 YGYGVFRFANGDVYTGNWTCSDVFDGCRSIALIHGFGVYRYANVGVYIGIWKKHERDGLG 185
+ G +NG+ Y+G +F G G Y +++ VY G W++ R G G
Sbjct: 298 FSVGELLLSNGESYSGT-----LFGNTPE-----GHGTYVWSDRCVYEGGWRRGMRHGNG 447
Query: 186 IMSWDTGDVFYGCWSNG 202
+ W G V+ G +S G
Sbjct: 448 KIRWPYGAVYEGEFSGG 498
Score = 33.1 bits (74), Expect = 0.093
Identities = 14/41 (34%), Positives = 23/41 (55%)
Frame = +1
Query: 229 DGRAIFDWANGDVFDGCMSNGLRHGFGVYRFANGDVYIGNW 269
+G + W++ V++G G+RHG G R+ G VY G +
Sbjct: 367 EGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEF 489
Score = 28.5 bits (62), Expect = 2.3
Identities = 16/51 (31%), Positives = 21/51 (40%)
Frame = +1
Query: 172 YIGIWKKHERDGLGIMSWDTGDVFYGCWSNGLAHGYGVYRSANGDVSIGNW 222
Y G + +G G W V+ G W G+ HG G R G V G +
Sbjct: 337 YSGTLFGNTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEF 489
Score = 27.7 bits (60), Expect = 3.9
Identities = 19/65 (29%), Positives = 30/65 (45%)
Frame = +1
Query: 110 LANGDVFNGCWSNDFVYGYGVFRFANGDVYTGNWTCSDVFDGCRSIALIHGFGVYRYANV 169
L+NG+ ++G + G+G + +++ VY G W G R HG G R+
Sbjct: 319 LSNGESYSGTLFGNTPEGHGTYVWSDRCVYEGGWR-----RGMR-----HGNGKIRWPYG 468
Query: 170 GVYIG 174
VY G
Sbjct: 469 AVYEG 483
>TC19218
Length = 624
Score = 32.0 bits (71), Expect = 0.21
Identities = 17/38 (44%), Positives = 21/38 (54%)
Frame = -2
Query: 378 LVIKREYMQGVLIVEKIRPYSEVTHNNNNNNNNNNKKQ 415
LVI + I+ +R T+NNNNN NNNNK Q
Sbjct: 503 LVIHVPFCLPTYIINSLR-----TYNNNNNRNNNNKLQ 405
>AV407282
Length = 320
Score = 32.0 bits (71), Expect = 0.21
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 402 HNNNNNNNNNNKKQGAFSAKKAKK 425
H+ NNNNNNNNK + ++A K
Sbjct: 191 HDYNNNNNNNNKNMSFYIGREASK 262
Score = 26.9 bits (58), Expect = 6.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 397 YSEVTHNNNNNNNNNNKKQGAFSAKKAKKSSCIW 430
Y + + ++ NNNNNNN K +F +++S +W
Sbjct: 173 YGKCSLHDYNNNNNNNNKNMSFYI--GREASKLW 268
>TC17706 similar to GB|AAM98108.1|22655034|AY139802 At3g54020/F5K20_320
{Arabidopsis thaliana;}, partial (27%)
Length = 615
Score = 32.0 bits (71), Expect = 0.21
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 402 HNNNNNNNNNNKKQGAFSAKKAKK 425
H+ NNNNNNNNK + ++A K
Sbjct: 317 HDYNNNNNNNNKNMSFYIGREASK 388
Score = 26.9 bits (58), Expect = 6.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 397 YSEVTHNNNNNNNNNNKKQGAFSAKKAKKSSCIW 430
Y + + ++ NNNNNNN K +F +++S +W
Sbjct: 299 YGKCSLHDYNNNNNNNNKNMSFYI--GREASKLW 394
>TC9459 similar to AAQ23982 (AAQ23982) Transcription factor Rap212, partial
(12%)
Length = 434
Score = 31.6 bits (70), Expect = 0.27
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 399 EVTHNNNNNNNNNNKKQGAFSAKKAKKS 426
E ++NNNNNNNN+N + K+ K++
Sbjct: 254 EESNNNNNNNNNSNSNSNSNKKKQQKRA 337
Score = 31.2 bits (69), Expect = 0.35
Identities = 13/29 (44%), Positives = 17/29 (57%)
Frame = +2
Query: 397 YSEVTHNNNNNNNNNNKKQGAFSAKKAKK 425
+ E NNNNNNNNN+ + KK +K
Sbjct: 245 FPEEESNNNNNNNNNSNSNSNSNKKKQQK 331
Score = 30.8 bits (68), Expect = 0.46
Identities = 17/35 (48%), Positives = 20/35 (56%), Gaps = 5/35 (14%)
Frame = +2
Query: 393 KIRPYSEVTHNNNNNNN-----NNNKKQGAFSAKK 422
K P E +NNNNNNN N+NKK+ AKK
Sbjct: 239 KFFPEEESNNNNNNNNNSNSNSNSNKKKQQKRAKK 343
Score = 28.1 bits (61), Expect = 3.0
Identities = 12/28 (42%), Positives = 17/28 (59%)
Frame = +2
Query: 398 SEVTHNNNNNNNNNNKKQGAFSAKKAKK 425
S +NNNNN+N+N+ K+AKK
Sbjct: 260 SNNNNNNNNNSNSNSNSNKKKQQKRAKK 343
>TC15166 similar to GB|AAK28312.1|13506739|AF224702 WRKY DNA-binding protein
6 {Arabidopsis thaliana;} , partial (26%)
Length = 668
Score = 31.6 bits (70), Expect = 0.27
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 401 THNNNNNNNNNNKKQGAFS 419
+HNNNNNNNNN FS
Sbjct: 366 SHNNNNNNNNNKSTMSNFS 422
>BP040333
Length = 480
Score = 30.8 bits (68), Expect = 0.46
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +1
Query: 398 SEVTHNNNNNNNNNN 412
++ T+NNNNNNNNNN
Sbjct: 64 TKTTNNNNNNNNNNN 108
Score = 30.0 bits (66), Expect = 0.79
Identities = 11/13 (84%), Positives = 12/13 (91%)
Frame = +1
Query: 402 HNNNNNNNNNNKK 414
+NNNNNNNNNN K
Sbjct: 82 NNNNNNNNNNNNK 120
Score = 28.5 bits (62), Expect = 2.3
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 402 HNNNNNNNNNNKKQ 415
+NNNNNNNNNN +
Sbjct: 79 NNNNNNNNNNNNNK 120
>BP065897
Length = 499
Score = 30.8 bits (68), Expect = 0.46
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 400 VTHNNNNNNNNNNKKQGAFSAKKAKKSSCIWAI 432
+THNNNNNN N N + A +C W +
Sbjct: 267 ITHNNNNNNQNKNTTEEKSRANPT--CTCTWLL 175
>TC17205 weakly similar to PIR|S50830|S50830 Machado-Joseph disease MJD1a
protein - human {Homo sapiens;}, partial (7%)
Length = 528
Score = 30.4 bits (67), Expect = 0.61
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 396 PYSEVTHNNNNNNNNNNKKQGAFS 419
PYS T+NNN+N NNN A S
Sbjct: 301 PYSAKTNNNNSNGTNNNSNNKAQS 372
>BP082711
Length = 379
Score = 30.0 bits (66), Expect = 0.79
Identities = 11/16 (68%), Positives = 13/16 (80%)
Frame = +3
Query: 397 YSEVTHNNNNNNNNNN 412
Y+ +NNNNNNNNNN
Sbjct: 174 YNNNNNNNNNNNNNNN 221
Score = 30.0 bits (66), Expect = 0.79
Identities = 11/12 (91%), Positives = 12/12 (99%)
Frame = +3
Query: 402 HNNNNNNNNNNK 413
+NNNNNNNNNNK
Sbjct: 201 NNNNNNNNNNNK 236
Score = 30.0 bits (66), Expect = 0.79
Identities = 11/13 (84%), Positives = 12/13 (91%)
Frame = +3
Query: 402 HNNNNNNNNNNKK 414
+NNNNNNNNNN K
Sbjct: 198 NNNNNNNNNNNNK 236
Score = 28.5 bits (62), Expect = 2.3
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 402 HNNNNNNNNNNKKQ 415
+NNNNNNNNNN +
Sbjct: 195 NNNNNNNNNNNNNK 236
Score = 28.1 bits (61), Expect = 3.0
Identities = 10/11 (90%), Positives = 11/11 (99%)
Frame = +3
Query: 402 HNNNNNNNNNN 412
+NNNNNNNNNN
Sbjct: 192 NNNNNNNNNNN 224
>TC14860 similar to UP|TPIS_COPJA (P21820) Triosephosphate isomerase,
cytosolic (TIM) , partial (68%)
Length = 917
Score = 30.0 bits (66), Expect = 0.79
Identities = 13/30 (43%), Positives = 18/30 (59%)
Frame = +1
Query: 402 HNNNNNNNNNNKKQGAFSAKKAKKSSCIWA 431
+NN NNNNNNNK+ F + ++ WA
Sbjct: 316 NNNQNNNNNNNKRVFQFLVEIETTTTKPWA 405
>TC11336 similar to UP|Q8S9A5 (Q8S9A5) Glucosyltransferase like protein
(Fragment), partial (27%)
Length = 511
Score = 30.0 bits (66), Expect = 0.79
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Frame = -1
Query: 265 YIGNW-----KKDKMDGTGIMSWVVGDVFDGCWS 293
++ +W KK +M TG + WVV GCWS
Sbjct: 415 WVASW*VHPRKKSEMRATGGLGWVVNHWIMGCWS 314
>BP058026
Length = 389
Score = 29.6 bits (65), Expect = 1.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 400 VTHNNNNNNNNNNKKQGAFSAKKAKKSSCIWAILKTIK 437
+ +NNNNNNNNNN + + I + K+++
Sbjct: 3 IINNNNNNNNNNNNNNNNNNNNNNNNNDLI*ILFKSLQ 116
>BP055028
Length = 530
Score = 29.3 bits (64), Expect = 1.3
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 393 KIRPYSEVTHNNNNNNNNNNKKQGAFSAKKAKKSS 427
K + + + +NNNNNNNNN + S KK KK++
Sbjct: 128 KNKAITPIHSSNNNNNNNNNVVK---SKKKKKKNN 223
>TC12971 similar to GB|AAN73294.1|25141199|BT002297 At5g12010/F14F18_180
{Arabidopsis thaliana;}, partial (7%)
Length = 721
Score = 28.9 bits (63), Expect = 1.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 403 NNNNNNNNNNKKQGAFSAKKAKK 425
NNNNNNN NN A S K+
Sbjct: 162 NNNNNNNYNNNNSSATSVNTRKR 230
Score = 28.5 bits (62), Expect = 2.3
Identities = 10/28 (35%), Positives = 18/28 (63%)
Frame = +3
Query: 398 SEVTHNNNNNNNNNNKKQGAFSAKKAKK 425
++ +NNNNN NNNN + + +K ++
Sbjct: 153 NDPNNNNNNNYNNNNSSATSVNTRKRRR 236
>TC15953 similar to UP|B2_DAUCA (P37707) B2 protein, partial (71%)
Length = 919
Score = 28.5 bits (62), Expect = 2.3
Identities = 12/29 (41%), Positives = 18/29 (61%)
Frame = +1
Query: 401 THNNNNNNNNNNKKQGAFSAKKAKKSSCI 429
++NNNNNN++NNK + A K S +
Sbjct: 103 SNNNNNNNDSNNKSKDAKKFKTLPASESL 189
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.140 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,047,459
Number of Sequences: 28460
Number of extensions: 145795
Number of successful extensions: 1342
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of query: 440
length of database: 4,897,600
effective HSP length: 93
effective length of query: 347
effective length of database: 2,250,820
effective search space: 781034540
effective search space used: 781034540
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Medicago: description of AC148755.12