TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148607.15 - phase: 0 
         (174 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC13911 homologue to UP|MPK2_ARATH (Q39022) Mitogen-activated pr...    25  5.6
BP041490                                                               25  5.6
BP063301                                                               25  5.6
AU089246                                                               25  7.3
TC9229 similar to UP|Q9SKU1 (Q9SKU1) At2g20760 protein (At2g2076...    25  7.3
AV770920                                                               25  7.3
TC14988 homologue to UP|Q8L7J5 (Q8L7J5) Pyruvate kinase  , parti...    25  9.6

>TC13911 homologue to UP|MPK2_ARATH (Q39022) Mitogen-activated protein
           kinase homolog 2  (MAP kinase 2) (AtMPK2) , partial
           (14%)
          Length = 499

 Score = 25.4 bits (54), Expect = 5.6
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 121 YFHVRPLNIGELENWHNYLDFIEREGDLSKVTKLLSYKGTFC 162
           +FH++ L  G   ++  Y DFI+    LSK+  +LS K   C
Sbjct: 216 FFHIKDLGGGCYLSF--YTDFIQ*RPKLSKLGLVLSLKSCCC 335


>BP041490 
          Length = 545

 Score = 25.4 bits (54), Expect = 5.6
 Identities = 12/39 (30%), Positives = 19/39 (47%)
 Frame = -1

Query: 36  NRPLSELRTADEAAAVAGVVSEGIDQGVEGEVHPDGADN 74
           N PLS + T  E+ + A + +  + Q    E H D + N
Sbjct: 224 NSPLSHINTESESPSSAAIAAIEVSQHSSIETHEDISQN 108


>BP063301 
          Length = 462

 Score = 25.4 bits (54), Expect = 5.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 62  GVEGEVHPDGADNSPKPASAGL 83
           G+ GE+ PDGA  +P P   G+
Sbjct: 130 GLGGEILPDGAARAPCPLHRGI 195


>AU089246 
          Length = 392

 Score = 25.0 bits (53), Expect = 7.3
 Identities = 16/34 (47%), Positives = 17/34 (49%)
 Frame = +3

Query: 14  RILENPNQQLDRYFNSFKELASNRPLSELRTADE 47
           R  E+  Q LDR   S    A N PL   RTADE
Sbjct: 207 RRFESFQQSLDRTIPSTSSHAINFPLLADRTADE 308


>TC9229 similar to UP|Q9SKU1 (Q9SKU1) At2g20760 protein
           (At2g20760/F5H14.27), partial (31%)
          Length = 756

 Score = 25.0 bits (53), Expect = 7.3
 Identities = 21/73 (28%), Positives = 31/73 (41%), Gaps = 3/73 (4%)
 Frame = +1

Query: 60  DQGV---EGEVHPDGADNSPKPASAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETT 116
           D+GV   +G V P   D  P+    G    E   +   + EE  K+ KE   KII     
Sbjct: 385 DEGVFVSDGPVLPPPGDMEPEE---GYALREWRRQNAILLEEKEKREKEMRLKIIEEAEE 555

Query: 117 IRRPYFHVRPLNI 129
            +  ++  R LN+
Sbjct: 556 YKVAFYEKRKLNV 594


>AV770920 
          Length = 426

 Score = 25.0 bits (53), Expect = 7.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 158 KGTFCSIFSCYR 169
           KG  CSIF CYR
Sbjct: 169 KGVSCSIFKCYR 204


>TC14988 homologue to UP|Q8L7J5 (Q8L7J5) Pyruvate kinase  , partial (61%)
          Length = 1179

 Score = 24.6 bits (52), Expect = 9.6
 Identities = 11/37 (29%), Positives = 22/37 (58%)
 Frame = -2

Query: 39  LSELRTADEAAAVAGVVSEGIDQGVEGEVHPDGADNS 75
           L  +RTA++A    G++ +G+D  +  ++ P   D+S
Sbjct: 581 LLAVRTAEDARLSNGLIGKGVDLIISLKIAP*SRDDS 471


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.316    0.135    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,629,973
Number of Sequences: 28460
Number of extensions: 28562
Number of successful extensions: 151
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of query: 174
length of database: 4,897,600
effective HSP length: 84
effective length of query: 90
effective length of database: 2,506,960
effective search space: 225626400
effective search space used: 225626400
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)