BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148532.9 + phase: 0
(267 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8082 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-... 220 2e-58
TC17232 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific ... 220 2e-58
TC10107 similar to UP|Q9MB24 (Q9MB24) S1-3 protein (Fragment), p... 178 1e-45
TC19645 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing pro... 143 6e-39
AV779646 141 1e-34
TC14280 weakly similar to UP|Q94IC5 (Q94IC5) BURP domain-contain... 130 3e-31
BP045414 114 1e-26
TC16074 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein... 108 1e-24
TC16694 similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein... 85 2e-21
TC17468 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific ... 97 3e-21
AV780764 89 8e-19
TC9286 similar to UP|O65009 (O65009) BURP domain containing prot... 89 1e-18
BE122612 72 1e-13
BP042359 69 1e-12
AV770881 59 2e-12
TC19611 61 2e-10
TC12015 weakly similar to UP|O65009 (O65009) BURP domain contain... 59 1e-09
AV769292 49 3e-07
AV418436 46 6e-06
AV767317 39 0.001
>TC8082 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-3, partial
(54%)
Length = 1913
Score = 220 bits (561), Expect = 2e-58
Identities = 110/226 (48%), Positives = 144/226 (63%), Gaps = 1/226 (0%)
Frame = +1
Query: 43 SQIQLHDKQNVTLFFLKKDLHHGTKLNLQFTN-NSGAKFLPKEVANSIPFSSNKMENILN 101
S LH+ FF + LH K + S LP+++ IPFS +KM+ +L
Sbjct: 958 SDHHLHEISARVGFFQEDQLHSDNKFYMHLNKIRSSIPLLPRQITQQIPFSLDKMKEVLE 1137
Query: 102 KFSIKEGSKEAEIVKRTISECEANGIKGEEKLCITSLESMVDFTISKLGNNVEAVSTEVD 161
S+K SK AEI+++TIS CEA + GEEK C TSLESM+DF SKLG NV A+ST+V
Sbjct: 1138 MLSVKPNSKNAEIMEKTISGCEAPAMDGEEKYCATSLESMMDFVTSKLGKNVHAMSTDVQ 1317
Query: 162 KNSNGLQQYVIAKGVKKLGEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPLEGVDGNMV 221
K + LQ ++ GVKKL + + I CH YPY VF CH+ T Y VPLEG DG V
Sbjct: 1318 KETK-LQNLLVKDGVKKLADDH-VIACHPLAYPYVVFGCHELQKTSAYFVPLEGEDGVRV 1491
Query: 222 KTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 267
K +AVCH DTS+W+P ++AF VLKV+PGTVP+CH P+ H++W+SK
Sbjct: 1492 KAVAVCHKDTSKWDPNYVAFRVLKVKPGTVPVCHFFPEGHLLWLSK 1629
>TC17232 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2,
partial (33%)
Length = 966
Score = 220 bits (561), Expect = 2e-58
Identities = 109/223 (48%), Positives = 148/223 (65%), Gaps = 2/223 (0%)
Frame = +3
Query: 47 LHDKQNVTLFFLKKDLHHGTKLNLQFTNNSGA-KFLPKEVANSIPFSSNKMENILNKFSI 105
LH+K +FF +++LH GTKL+LQ + A LP+++A+ IPFS K++ IL +
Sbjct: 108 LHEKTKAGVFFFEENLHPGTKLDLQLSKRKPAVPILPRKIADQIPFSLEKLKEILEILVV 287
Query: 106 KEGSKEAEIVKRTISECEANGIKGEEKLCITSLESMVDFTISKLGNNVEAVSTEVDKNSN 165
K SK EIV++T+ CE ++GEE++C TSLES+VDF SKLG NV A+STEV+
Sbjct: 288 KPDSKNTEIVEKTMGGCELPSMEGEEQMCATSLESLVDFIASKLGKNVLAISTEVELEKE 467
Query: 166 GLQQYVIAK-GVKKLGEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPLEGVDGNMVKTI 224
Q ++ K GVKKL + VCH YPY V + HK T Y VPLEG DG VK +
Sbjct: 468 TQSQNLLVKDGVKKLADDGMA-VCHPMTYPYPVCFSHKLVKTSAYFVPLEGEDGARVKAV 644
Query: 225 AVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 267
AVCH DTS+W+P H++F L V+PGTVP+CH+LP+ H++WV K
Sbjct: 645 AVCHRDTSKWDPNHVSFPDLNVKPGTVPVCHVLPERHLLWVPK 773
>TC10107 similar to UP|Q9MB24 (Q9MB24) S1-3 protein (Fragment), partial
(65%)
Length = 575
Score = 178 bits (451), Expect = 1e-45
Identities = 82/113 (72%), Positives = 94/113 (82%)
Frame = +2
Query: 155 AVSTEVDKNSNGLQQYVIAKGVKKLGEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPLE 214
AVST VDK + Q+Y IA GVKKL +K +VCHK+NYPYAVFYCHK+DST YSVPLE
Sbjct: 2 AVSTVVDKETEK-QRYTIATGVKKLEAGDKAVVCHKQNYPYAVFYCHKSDSTRAYSVPLE 178
Query: 215 GVDGNMVKTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 267
G +G VK +AVCHTDTS+WNPKHLAF VLKV+PGTVP+CH LP+DHVVWVSK
Sbjct: 179 GDNGVRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVSK 337
>TC19645 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing protein
(Fragment), partial (38%)
Length = 619
Score = 143 bits (360), Expect(2) = 6e-39
Identities = 76/118 (64%), Positives = 91/118 (76%), Gaps = 4/118 (3%)
Frame = +3
Query: 59 KKDLHHGTKLNLQFTNNSGAK----FLPKEVANSIPFSSNKMENILNKFSIKEGSKEAEI 114
K+ TKLNLQFT S FLP++VA+SIPFSSNK++++LNKFS+K GS+EAEI
Sbjct: 99 KRTCIRXTKLNLQFTKTSNDAAATFFLPRQVADSIPFSSNKVDDVLNKFSLKPGSEEAEI 278
Query: 115 VKRTISECEANGIKGEEKLCITSLESMVDFTISKLGNNVEAVSTEVDKNSNGLQQYVI 172
VK TI+ECE G+ GEEK C+TSLESMVDFT SKLG NVEAVST+V+K LQQY I
Sbjct: 279 VKNTIAECEEPGVVGEEKRCVTSLESMVDFTTSKLGKNVEAVSTDVNKEKE-LQQYTI 449
Score = 45.8 bits (107), Expect = 8e-06
Identities = 22/38 (57%), Positives = 27/38 (70%)
Frame = +2
Query: 33 PFFYLYALNESQIQLHDKQNVTLFFLKKDLHHGTKLNL 70
PF Y YA +E+Q LH+ NV LFFL+KDLH G K+ L
Sbjct: 26 PFDYNYAASETQ--LHENPNVALFFLEKDLHQGNKIEL 133
Score = 33.9 bits (76), Expect(2) = 6e-39
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 184 KTIVCHKENYPYAVFYCHK 202
K ++ HKENYPYAVF C K
Sbjct: 482 KLLLFHKENYPYAVFXCXK 538
>AV779646
Length = 510
Score = 141 bits (356), Expect = 1e-34
Identities = 69/123 (56%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Frame = -3
Query: 144 FTISKLGNNVEAVSTEVDKNSNGLQQYVIAK-GVKKLGEKNKTIVCHKENYPYAVFYCHK 202
F SKLGN+V A+STEV K + L Y++ K GV+KL + T VCH YPY VF+CHK
Sbjct: 508 FITSKLGNDVHAMSTEVTKETKLL--YLLVKDGVEKLADDYIT-VCHPMAYPYVVFWCHK 338
Query: 203 TDSTEVYSVPLEGVDGNMVKTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHV 262
T+ Y VPLEG DG VK +AVCH DTS+W+P H AF LKV+PGTVP+CH LP+ H+
Sbjct: 337 LQKTDAYFVPLEGEDGVRVKAVAVCHKDTSKWDPNHAAFQDLKVKPGTVPVCHFLPEGHL 158
Query: 263 VWV 265
+W+
Sbjct: 157 LWL 149
>TC14280 weakly similar to UP|Q94IC5 (Q94IC5) BURP domain-containing protein
(Fragment), partial (54%)
Length = 723
Score = 130 bits (326), Expect = 3e-31
Identities = 81/159 (50%), Positives = 97/159 (60%), Gaps = 24/159 (15%)
Frame = +2
Query: 2 VDVSKGGVDVGVRKVYEGG--GTYVN---------------DEKFPFV------PFFYLY 38
VDV KGGV+V K GG GT VN K FV PF Y+Y
Sbjct: 251 VDVGKGGVNVNAGKGSGGGHGGTNVNVGGGKGGGVSVHTGHKGKPVFVNVGSKSPFDYVY 430
Query: 39 ALNESQIQLHDKQNVTLFFLKKDLHHGTKLNLQFTNNSG-AKFLPKEVANSIPFSSNKME 97
A E+Q LH NV LFFL+K+LH GTK+NL FT S A FLP+ VA+SIPFSS K+E
Sbjct: 431 AATETQ--LHSDPNVALFFLEKNLHPGTKMNLHFTKTSNKATFLPRIVADSIPFSSEKVE 604
Query: 98 NILNKFSIKEGSKEAEIVKRTISECEANGIKGEEKLCIT 136
LNK+S+K GS+EA+++K TI ECE GI+GEEK C T
Sbjct: 605 LALNKYSVKAGSEEAQVMKNTIDECEQKGIQGEEKYCAT 721
>BP045414
Length = 478
Score = 114 bits (286), Expect = 1e-26
Identities = 52/91 (57%), Positives = 64/91 (70%)
Frame = -2
Query: 175 GVKKLGEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPLEGVDGNMVKTIAVCHTDTSEW 234
GVKKL + VCH YPYAVF+CHK T Y VPLEG DG V +AVC DTS+W
Sbjct: 471 GVKKLPDDG-IAVCHPLTYPYAVFFCHKLVKTSAYFVPLEGEDGARV*PVAVCPRDTSKW 295
Query: 235 NPKHLAFYVLKVQPGTVPICHILPQDHVVWV 265
+P H++F L VQPGTVP+CH+LP+ H++WV
Sbjct: 294 DPNHVSFPDLHVQPGTVPVCHVLPERHLLWV 202
>TC16074 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-3, partial
(6%)
Length = 844
Score = 108 bits (269), Expect = 1e-24
Identities = 64/164 (39%), Positives = 96/164 (58%), Gaps = 6/164 (3%)
Frame = +2
Query: 48 HDKQNVTLFFLKKDLHHGTKLNLQFT---NNSGAKFLPKEVANSIPFSSNKMENILNKFS 104
H + +FF+ KDL G K+ + F+ +++ KFLP+E AN IPFSS ++ ++LN FS
Sbjct: 353 HMDPELHVFFIPKDLKVGKKMPIYFSMKDSSTSPKFLPREEANQIPFSSKQLPSLLNFFS 532
Query: 105 IKEGSKEAEIVKRTISECEANGIKGEEKLCITSLESMVDFTISKLGNNVE---AVSTEVD 161
I + S +A+ +K T+ +CE ++GE K C TSLES++D G + + +T +
Sbjct: 533 IPKNSPQAKAMKYTLEQCEFEPMEGETKFCATSLESLLDSARHLFGLSPQFKVLTTTHLT 712
Query: 162 KNSNGLQQYVIAKGVKKLGEKNKTIVCHKENYPYAVFYCHKTDS 205
K+ LQ Y I + VK+ N I CH YP+AVFYCH S
Sbjct: 713 KSHVLLQNYTILE-VKENRVPN-VIGCHPMPYPFAVFYCHSQQS 838
>TC16694 similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2, partial
(12%)
Length = 488
Score = 85.1 bits (209), Expect(2) = 2e-21
Identities = 35/57 (61%), Positives = 44/57 (76%)
Frame = +1
Query: 209 YSVPLEGVDGNMVKTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWV 265
Y VPLEG DG V +AVCH DTS+W+P H AF LKV+PGTVP+CH LP+ H++W+
Sbjct: 106 YFVPLEGEDGVRVNHVAVCHQDTSKWDPNHAAFPDLKVKPGTVPVCHFLPEGHLLWL 276
Score = 33.1 bits (74), Expect(2) = 2e-21
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 175 GVKKLGEKNKTIVCHKENYPYAVFYCH 201
GV+KL + T VCH YPY VF+CH
Sbjct: 6 GVEKLADDYIT-VCHPMAYPYLVFWCH 83
>TC17468 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2,
partial (11%)
Length = 652
Score = 97.1 bits (240), Expect = 3e-21
Identities = 42/101 (41%), Positives = 60/101 (58%), Gaps = 1/101 (0%)
Frame = +3
Query: 168 QQYVIAKGVKKLGEKNKTIVCHKENYPYAVFYCHKTDS-TEVYSVPLEGVDGNMVKTIAV 226
Q Y I + + ++ K + CH YPYAVFYCH +S VY V L G +G+ V+ + V
Sbjct: 3 QNYTILENIMRISAP-KMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKVEAMVV 179
Query: 227 CHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 267
CH DTS W H++F +L V PG+ +CH P D+++W K
Sbjct: 180 CHLDTSHWGSGHVSFQILGVTPGSSSVCHFFPADNLIWAPK 302
>AV780764
Length = 438
Score = 89.0 bits (219), Expect = 8e-19
Identities = 39/72 (54%), Positives = 49/72 (67%)
Frame = -1
Query: 194 PYAVFYCHKTDSTEVYSVPLEGVDGNMVKTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPI 253
PY VF+ H + Y VPLEG DG VKTIAVCH TS+W+P H A LKV+PGT P+
Sbjct: 378 PYVVFWFH*LPKPQAYFVPLEGEDGVRVKTIAVCHQHTSKWDPNHAALPNLKVKPGTGPV 199
Query: 254 CHILPQDHVVWV 265
CH L + H++W+
Sbjct: 198 CHFLLEGHLLWL 163
>TC9286 similar to UP|O65009 (O65009) BURP domain containing protein,
partial (6%)
Length = 805
Score = 88.6 bits (218), Expect = 1e-18
Identities = 48/128 (37%), Positives = 75/128 (58%), Gaps = 3/128 (2%)
Frame = +1
Query: 48 HDKQNVTLFFLKKDLHHGTKLNLQFTNNSGAKFLPKEVANSIPFSSNKMENILNKFSIKE 107
H + T FF DL+ G + LQF + FL ++ N IPFSS+++ ++L FSI E
Sbjct: 421 HTEAFKTGFFALDDLYAGNVMTLQFPVQEISHFLSRKETNYIPFSSSQLPSVLQLFSIPE 600
Query: 108 GSKEAEIVKRTISECEANGIKGEEKLCITSLESMVDFTISKLGNNVEA---VSTEVDKNS 164
S +A+ ++ T+ +CE I GE K+C TSLESM++F S +G+N E ++ +
Sbjct: 601 DSPKAKSMRGTLGQCEGEPITGERKICATSLESMLEFVDSVIGSNTEGDLLTTSHPSPSG 780
Query: 165 NGLQQYVI 172
+ LQ+Y I
Sbjct: 781 SPLQKYTI 804
>BE122612
Length = 386
Score = 72.0 bits (175), Expect = 1e-13
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Frame = +2
Query: 101 NKFSIKEGSKEAEIVKRTISECEANGIKGEEKLCITSLESMVDFTISKLGNNVEAVSTEV 160
N GS E ++++ ++ ECE +GE K C+ S+E MVDF S LG NV +TE
Sbjct: 2 NSARADNGSME-KMMRDSLQECERVPSRGETKRCVGSIEDMVDFATSVLGRNVVVRTTE- 175
Query: 161 DKNSNGLQQYVIAKGVKKL--GEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPL 213
N NG + V+ V+ + G+ +++ CH+ +PY ++YCH VY L
Sbjct: 176 --NVNGSNKKVMVGRVQGVNGGKVTRSVSCHQSLFPYLLYYCHSLPKVRVYQADL 334
>BP042359
Length = 404
Score = 68.6 bits (166), Expect = 1e-12
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = -3
Query: 193 YPYAVFYCHKTDSTEVYSVPLEGVDGNMVKT--IAVCHTDTSEWNPKHLAFYVLKVQPGT 250
YPY ++YCH VY + VD + +A+CH DTS W P+H AF L PG
Sbjct: 402 YPYLLYYCHSVPQVRVYEAEILDVDTKLKINHGVAICHLDTSAWGPEHGAFVALGAGPGK 223
Query: 251 VPICHILPQDHVVWVS 266
+ +CH + Q+ + W +
Sbjct: 222 IEVCHWIFQNDMTWTT 175
>AV770881
Length = 403
Score = 58.9 bits (141), Expect(2) = 2e-12
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = -3
Query: 221 VKTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWV 265
+K + VCH DTS+W+P H AF LKV+PGTVP+ LP+ ++W+
Sbjct: 302 LKPLLVCHQDTSKWDPNHAAFPDLKVKPGTVPVSQFLPEGPLLWL 168
Score = 28.9 bits (63), Expect(2) = 2e-12
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 188 CHKENYPYAVFYCHKTDST 206
CH YPY VF+CH T
Sbjct: 403 CHPMAYPYGVFWCHGLPKT 347
>TC19611
Length = 533
Score = 61.2 bits (147), Expect = 2e-10
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = -3
Query: 34 FFYLYALNESQIQLHDKQNVTLFFLKKDLHHGTKLNLQFTN-NSGAKFLPKEVANSIPFS 92
F+ Y E+Q + FF + LH G K N+ S +LP+E+A+ IPFS
Sbjct: 258 FYAYYVAKETQSRS--------FFEEYQLHAGNKFNVNLNKIKSVVPWLPREIADHIPFS 103
Query: 93 SNKMENILNKFSIKEGSKEAEIVKRTISECEA 124
+KM IL S+K SK AE+V++TI +CE+
Sbjct: 102 LDKMNEILEMLSVKLESKNAEMVEKTIGDCES 7
>TC12015 weakly similar to UP|O65009 (O65009) BURP domain containing
protein, partial (12%)
Length = 464
Score = 58.5 bits (140), Expect = 1e-09
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +1
Query: 224 IAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 267
+ VCH DTS+W P H+ F L ++ G P+CH P H++WV+K
Sbjct: 4 LGVCHLDTSDWTPSHIIFKQLGIEAGKAPVCHFFPIKHLMWVAK 135
>AV769292
Length = 250
Score = 49.3 bits (116), Expect(2) = 3e-07
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 233 EWNPKHLAFYVLKVQPGTVPICHILPQ 259
+WN KHLAF VLKV+PGTV +CH LPQ
Sbjct: 248 KWNLKHLAFQVLKVKPGTVSVCHFLPQ 168
Score = 20.8 bits (42), Expect(2) = 3e-07
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 259 QDHVVWVSK 267
+DHVVWV K
Sbjct: 169 KDHVVWVPK 143
>AV418436
Length = 280
Score = 46.2 bits (108), Expect = 6e-06
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1
Query: 245 KVQPGTVPICHILPQDHVVWVSK 267
KV+PGTV +CH LPQDHVVWV K
Sbjct: 280 KVKPGTVSVCHFLPQDHVVWVPK 212
>AV767317
Length = 226
Score = 38.9 bits (89), Expect = 0.001
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1
Query: 236 PKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 267
P ++AF VLKV+PGT P+ H PQ W+S+
Sbjct: 226 PNYVAFPVLKVKPGTGPVGHFFPQGPFFWLSQ 131
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.316 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,543,970
Number of Sequences: 28460
Number of extensions: 58333
Number of successful extensions: 307
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of query: 267
length of database: 4,897,600
effective HSP length: 89
effective length of query: 178
effective length of database: 2,364,660
effective search space: 420909480
effective search space used: 420909480
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)
Medicago: description of AC148532.9