TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148532.5 + phase: 0 /pseudo
         (343 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC8082 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-...   215  8e-57
TC17232 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific ...   207  3e-54
TC19645 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing pro...   143  2e-44
TC10107 similar to UP|Q9MB24 (Q9MB24) S1-3 protein (Fragment), p...   154  2e-38
TC14280 weakly similar to UP|Q94IC5 (Q94IC5) BURP domain-contain...   151  1e-37
AV779646                                                              142  1e-34
BP045414                                                              109  8e-25
TC16074 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein...   109  8e-25
TC16694 similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein...    77  2e-20
TC17468 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific ...    94  4e-20
AV780764                                                               82  1e-16
TC9286 similar to UP|O65009 (O65009) BURP domain containing prot...    77  3e-15
BE122612                                                               70  4e-13
AV770881                                                               51  4e-13
TC13199 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing pro...    64  4e-11
BP042359                                                               60  5e-10
TC19611                                                                57  3e-09
AV769292                                                               47  5e-06
TC12015 weakly similar to UP|O65009 (O65009) BURP domain contain...    45  2e-05
AV771878                                                               42  1e-04

>TC8082 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-3, partial
            (54%)
          Length = 1913

 Score =  215 bits (548), Expect = 8e-57
 Identities = 106/230 (46%), Positives = 144/230 (62%), Gaps = 1/230 (0%)
 Frame = +1

Query: 115  YEND-ANEAELHDNRNLAMFLLEKDLHHGTKFNIQFTKTSDHGPTFLPGDVANSIPFSSN 173
            +EN  A++  LH+      F  E  LH   KF +   K     P  LP  +   IPFS +
Sbjct: 940  HENSGASDHHLHEISARVGFFQEDQLHSDNKFYMHLNKIRSSIP-LLPRQITQQIPFSLD 1116

Query: 174  KLENILNYFSIKQGSTESEIVKNTISECEAYGIKGEEKLCVTSLESMIDFTTLKLGNNVD 233
            K++ +L   S+K  S  +EI++ TIS CEA  + GEEK C TSLESM+DF T KLG NV 
Sbjct: 1117 KMKEVLEMLSVKPNSKNAEIMEKTISGCEAPAMDGEEKYCATSLESMMDFVTSKLGKNVH 1296

Query: 234  TVSTEVNGESGLQQYVIANGVKKMGENNLVVCHKRNYPYAVFYCHKTDATKVYSVPLEGA 293
             +ST+V  E+ LQ  ++ +GVKK+ +++++ CH   YPY VF CH+   T  Y VPLEG 
Sbjct: 1297 AMSTDVQKETKLQNLLVKDGVKKLADDHVIACHPLAYPYVVFGCHELQKTSAYFVPLEGE 1476

Query: 294  DGSRVKAVAICHSDTSQWSLKHLAFQVLKVQQGTFPVCHILQQGQVVWFS 343
            DG RVKAVA+CH DTS+W   ++AF+VLKV+ GT PVCH   +G ++W S
Sbjct: 1477 DGVRVKAVAVCHKDTSKWDPNYVAFRVLKVKPGTVPVCHFFPEGHLLWLS 1626



 Score = 47.8 bits (112), Expect = 3e-06
 Identities = 18/33 (54%), Positives = 26/33 (78%)
 Frame = +1

Query: 8   LALVATHATLPPELYWKSKLPTTQIPKAITDIL 40
           + L+ THA LPPE+YWK  LP+T +PKA+ ++L
Sbjct: 70  MMLMTTHAALPPEIYWKMMLPSTPMPKAVIELL 168


>TC17232 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2,
           partial (33%)
          Length = 966

 Score =  207 bits (526), Expect = 3e-54
 Identities = 104/246 (42%), Positives = 152/246 (61%), Gaps = 3/246 (1%)
 Frame = +3

Query: 99  VNGKTRIVYDAAPIYFYENDANEAEL-HDNRNLAMFLLEKDLHHGTKFNIQFTKTSDHGP 157
           +  K   ++D   +Y Y++ A+  +L H+     +F  E++LH GTK ++Q +K     P
Sbjct: 30  IGAKEIQLHDDTNLYGYKSGASLHKLLHEKTKAGVFFFEENLHPGTKLDLQLSKRKPAVP 209

Query: 158 TFLPGDVANSIPFSSNKLENILNYFSIKQGSTESEIVKNTISECEAYGIKGEEKLCVTSL 217
             LP  +A+ IPFS  KL+ IL    +K  S  +EIV+ T+  CE   ++GEE++C TSL
Sbjct: 210 -ILPRKIADQIPFSLEKLKEILEILVVKPDSKNTEIVEKTMGGCELPSMEGEEQMCATSL 386

Query: 218 ESMIDFTTLKLGNNVDTVSTEVN--GESGLQQYVIANGVKKMGENNLVVCHKRNYPYAVF 275
           ES++DF   KLG NV  +STEV    E+  Q  ++ +GVKK+ ++ + VCH   YPY V 
Sbjct: 387 ESLVDFIASKLGKNVLAISTEVELEKETQSQNLLVKDGVKKLADDGMAVCHPMTYPYPVC 566

Query: 276 YCHKTDATKVYSVPLEGADGSRVKAVAICHSDTSQWSLKHLAFQVLKVQQGTFPVCHILQ 335
           + HK   T  Y VPLEG DG+RVKAVA+CH DTS+W   H++F  L V+ GT PVCH+L 
Sbjct: 567 FSHKLVKTSAYFVPLEGEDGARVKAVAVCHRDTSKWDPNHVSFPDLNVKPGTVPVCHVLP 746

Query: 336 QGQVVW 341
           +  ++W
Sbjct: 747 ERHLLW 764


>TC19645 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing protein
           (Fragment), partial (38%)
          Length = 619

 Score =  143 bits (360), Expect(3) = 2e-44
 Identities = 73/110 (66%), Positives = 87/110 (78%), Gaps = 2/110 (1%)
 Frame = +3

Query: 143 TKFNIQFTKTSDHGPT--FLPGDVANSIPFSSNKLENILNYFSIKQGSTESEIVKNTISE 200
           TK N+QFTKTS+      FLP  VA+SIPFSSNK++++LN FS+K GS E+EIVKNTI+E
Sbjct: 120 TKLNLQFTKTSNDAAATFFLPRQVADSIPFSSNKVDDVLNKFSLKPGSEEAEIVKNTIAE 299

Query: 201 CEAYGIKGEEKLCVTSLESMIDFTTLKLGNNVDTVSTEVNGESGLQQYVI 250
           CE  G+ GEEK CVTSLESM+DFTT KLG NV+ VST+VN E  LQQY I
Sbjct: 300 CEEPGVVGEEKRCVTSLESMVDFTTSKLGKNVEAVSTDVNKEKELQQYTI 449



 Score = 42.0 bits (97), Expect(3) = 2e-44
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +2

Query: 115 YENDANEAELHDNRNLAMFLLEKDLHHGTKFNI 147
           Y   A+E +LH+N N+A+F LEKDLH G K  +
Sbjct: 35  YNYAASETQLHENPNVALFFLEKDLHQGNKIEL 133



 Score = 31.6 bits (70), Expect(3) = 2e-44
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 262 LVVCHKRNYPYAVFYCHK 279
           L++ HK NYPYAVF C K
Sbjct: 485 LLLFHKENYPYAVFXCXK 538


>TC10107 similar to UP|Q9MB24 (Q9MB24) S1-3 protein (Fragment), partial
           (65%)
          Length = 575

 Score =  154 bits (390), Expect = 2e-38
 Identities = 73/110 (66%), Positives = 88/110 (79%), Gaps = 1/110 (0%)
 Frame = +2

Query: 235 VSTEVNGESGLQQYVIANGVKKM-GENNLVVCHKRNYPYAVFYCHKTDATKVYSVPLEGA 293
           VST V+ E+  Q+Y IA GVKK+   +  VVCHK+NYPYAVFYCHK+D+T+ YSVPLEG 
Sbjct: 5   VSTVVDKETEKQRYTIATGVKKLEAGDKAVVCHKQNYPYAVFYCHKSDSTRAYSVPLEGD 184

Query: 294 DGSRVKAVAICHSDTSQWSLKHLAFQVLKVQQGTFPVCHILQQGQVVWFS 343
           +G RVKAVA+CH+DTSQW+ KHLAFQVLKV+ GT PVCH L +  VVW S
Sbjct: 185 NGVRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVS 334


>TC14280 weakly similar to UP|Q94IC5 (Q94IC5) BURP domain-containing protein
           (Fragment), partial (54%)
          Length = 723

 Score =  151 bits (382), Expect = 1e-37
 Identities = 100/231 (43%), Positives = 132/231 (56%), Gaps = 20/231 (8%)
 Frame = +2

Query: 5   VLQLALVAT-HATLPPELYWKSKLPTTQIPKAITDILHPIC*LNLYRLYNFIFTLMKGKA 63
           +L + LVAT HA LPPELYWKS LPTT +PKAITDIL+P    +     +    + KG  
Sbjct: 44  LLSVLLVATSHAALPPELYWKSVLPTTPMPKAITDILYP----HWVEDKSTNVGVRKGGV 211

Query: 64  KCDSKICM**LT*KLIQLGVTSVDDGKISVDG----KISVNG------KTRIVYDAAPIY 113
             D+       T   +  G  +V+ GK S  G     ++V G           +   P++
Sbjct: 212 NVDAGKGKPGHTKVDVGKGGVNVNAGKGSGGGHGGTNVNVGGGKGGGVSVHTGHKGKPVF 391

Query: 114 F---------YENDANEAELHDNRNLAMFLLEKDLHHGTKFNIQFTKTSDHGPTFLPGDV 164
                     Y   A E +LH + N+A+F LEK+LH GTK N+ FTKTS+   TFLP  V
Sbjct: 392 VNVGSKSPFDYVYAATETQLHSDPNVALFFLEKNLHPGTKMNLHFTKTSNKA-TFLPRIV 568

Query: 165 ANSIPFSSNKLENILNYFSIKQGSTESEIVKNTISECEAYGIKGEEKLCVT 215
           A+SIPFSS K+E  LN +S+K GS E++++KNTI ECE  GI+GEEK C T
Sbjct: 569 ADSIPFSSEKVELALNKYSVKAGSEEAQVMKNTIDECEQKGIQGEEKYCAT 721


>AV779646 
          Length = 510

 Score =  142 bits (357), Expect = 1e-34
 Identities = 64/119 (53%), Positives = 82/119 (68%)
 Frame = -3

Query: 223 FTTLKLGNNVDTVSTEVNGESGLQQYVIANGVKKMGENNLVVCHKRNYPYAVFYCHKTDA 282
           F T KLGN+V  +STEV  E+ L   ++ +GV+K+ ++ + VCH   YPY VF+CHK   
Sbjct: 508 FITSKLGNDVHAMSTEVTKETKLLYLLVKDGVEKLADDYITVCHPMAYPYVVFWCHKLQK 329

Query: 283 TKVYSVPLEGADGSRVKAVAICHSDTSQWSLKHLAFQVLKVQQGTFPVCHILQQGQVVW 341
           T  Y VPLEG DG RVKAVA+CH DTS+W   H AFQ LKV+ GT PVCH L +G ++W
Sbjct: 328 TDAYFVPLEGEDGVRVKAVAVCHKDTSKWDPNHAAFQDLKVKPGTVPVCHFLPEGHLLW 152


>BP045414 
          Length = 478

 Score =  109 bits (272), Expect = 8e-25
 Identities = 47/90 (52%), Positives = 62/90 (68%)
 Frame = -2

Query: 252 NGVKKMGENNLVVCHKRNYPYAVFYCHKTDATKVYSVPLEGADGSRVKAVAICHSDTSQW 311
           +GVKK+ ++ + VCH   YPYAVF+CHK   T  Y VPLEG DG+RV  VA+C  DTS+W
Sbjct: 474 DGVKKLPDDGIAVCHPLTYPYAVFFCHKLVKTSAYFVPLEGEDGARV*PVAVCPRDTSKW 295

Query: 312 SLKHLAFQVLKVQQGTFPVCHILQQGQVVW 341
              H++F  L VQ GT PVCH+L +  ++W
Sbjct: 294 DPNHVSFPDLHVQPGTVPVCHVLPERHLLW 205


>TC16074 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-3, partial
           (6%)
          Length = 844

 Score =  109 bits (272), Expect = 8e-25
 Identities = 64/159 (40%), Positives = 90/159 (56%), Gaps = 5/159 (3%)
 Frame = +2

Query: 125 HDNRNLAMFLLEKDLHHGTKFNIQFT-KTSDHGPTFLPGDVANSIPFSSNKLENILNYFS 183
           H +  L +F + KDL  G K  I F+ K S   P FLP + AN IPFSS +L ++LN+FS
Sbjct: 353 HMDPELHVFFIPKDLKVGKKMPIYFSMKDSSTSPKFLPREEANQIPFSSKQLPSLLNFFS 532

Query: 184 IKQGSTESEIVKNTISECEAYGIKGEEKLCVTSLESMIDFTTLKLGNN----VDTVSTEV 239
           I + S +++ +K T+ +CE   ++GE K C TSLES++D      G +    V T +   
Sbjct: 533 IPKNSPQAKAMKYTLEQCEFEPMEGETKFCATSLESLLDSARHLFGLSPQFKVLTTTHLT 712

Query: 240 NGESGLQQYVIANGVKKMGENNLVVCHKRNYPYAVFYCH 278
                LQ Y I   VK+    N++ CH   YP+AVFYCH
Sbjct: 713 KSHVLLQNYTILE-VKENRVPNVIGCHPMPYPFAVFYCH 826


>TC16694 similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2, partial
           (12%)
          Length = 488

 Score = 76.6 bits (187), Expect(2) = 2e-20
 Identities = 33/56 (58%), Positives = 39/56 (68%)
 Frame = +1

Query: 286 YSVPLEGADGSRVKAVAICHSDTSQWSLKHLAFQVLKVQQGTFPVCHILQQGQVVW 341
           Y VPLEG DG RV  VA+CH DTS+W   H AF  LKV+ GT PVCH L +G ++W
Sbjct: 106 YFVPLEGEDGVRVNHVAVCHQDTSKWDPNHAAFPDLKVKPGTVPVCHFLPEGHLLW 273



 Score = 38.5 bits (88), Expect(2) = 2e-20
 Identities = 13/27 (48%), Positives = 20/27 (73%)
 Frame = +3

Query: 252 NGVKKMGENNLVVCHKRNYPYAVFYCH 278
           +GV+K+ ++ + VCH   YPY VF+CH
Sbjct: 3   DGVEKLADDYITVCHPMAYPYLVFWCH 83


>TC17468 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2,
           partial (11%)
          Length = 652

 Score = 93.6 bits (231), Expect = 4e-20
 Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = +3

Query: 246 QQYVIANGVKKMGENNLVVCHKRNYPYAVFYCHKTDA-TKVYSVPLEGADGSRVKAVAIC 304
           Q Y I   + ++    +V CH   YPYAVFYCH  ++  +VY V L G +G +V+A+ +C
Sbjct: 3   QNYTILENIMRISAPKMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKVEAMVVC 182

Query: 305 HSDTSQWSLKHLAFQVLKVQQGTFPVCHILQQGQVVW 341
           H DTS W   H++FQ+L V  G+  VCH      ++W
Sbjct: 183 HLDTSHWGSGHVSFQILGVTPGSSSVCHFFPADNLIW 293


>AV780764 
          Length = 438

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 36/71 (50%), Positives = 45/71 (62%)
 Frame = -1

Query: 271 PYAVFYCHKTDATKVYSVPLEGADGSRVKAVAICHSDTSQWSLKHLAFQVLKVQQGTFPV 330
           PY VF+ H     + Y VPLEG DG RVK +A+CH  TS+W   H A   LKV+ GT PV
Sbjct: 378 PYVVFWFH*LPKPQAYFVPLEGEDGVRVKTIAVCHQHTSKWDPNHAALPNLKVKPGTGPV 199

Query: 331 CHILQQGQVVW 341
           CH L +G ++W
Sbjct: 198 CHFLLEGHLLW 166


>TC9286 similar to UP|O65009 (O65009) BURP domain containing protein,
           partial (6%)
          Length = 805

 Score = 77.4 bits (189), Expect = 3e-15
 Identities = 55/173 (31%), Positives = 85/173 (48%), Gaps = 5/173 (2%)
 Frame = +1

Query: 83  VTSVDDGKISVDGKISVNGKTRIVYDAAPIYFYENDANEAELHDNRNLAMFLLEKDLHHG 142
           +T   DG    D K+S  G             +E  +   +  +      F L+ DL+ G
Sbjct: 337 LTQYGDGTQKTDPKVSTQG-------------HEEKSKNVDHTEAFKTGFFALD-DLYAG 474

Query: 143 TKFNIQF-TKTSDHGPTFLPGDVANSIPFSSNKLENILNYFSIKQGSTESEIVKNTISEC 201
               +QF  +   H   FL     N IPFSS++L ++L  FSI + S +++ ++ T+ +C
Sbjct: 475 NVMTLQFPVQEISH---FLSRKETNYIPFSSSQLPSVLQLFSIPEDSPKAKSMRGTLGQC 645

Query: 202 EAYGIKGEEKLCVTSLESMIDFTTLKLGNNV--DTVSTEVNGESG--LQQYVI 250
           E   I GE K+C TSLESM++F    +G+N   D ++T     SG  LQ+Y I
Sbjct: 646 EGEPITGERKICATSLESMLEFVDSVIGSNTEGDLLTTSHPSPSGSPLQKYTI 804


>BE122612 
          Length = 386

 Score = 70.5 bits (171), Expect = 4e-13
 Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +2

Query: 187 GSTESEIVKNTISECEAYGIKGEEKLCVTSLESMIDFTTLKLGNNVDTVSTE-VNGESGL 245
           GS E +++++++ ECE    +GE K CV S+E M+DF T  LG NV   +TE VNG +  
Sbjct: 23  GSME-KMMRDSLQECERVPSRGETKRCVGSIEDMVDFATSVLGRNVVVRTTENVNGSNKK 199

Query: 246 QQYVIANGVKKMGENNLVVCHKRNYPYAVFYCHKTDATKVYSVPL 290
                  GV        V CH+  +PY ++YCH     +VY   L
Sbjct: 200 VMVGRVQGVNGGKVTRSVSCHQSLFPYLLYYCHSLPKVRVYQADL 334


>AV770881 
          Length = 403

 Score = 50.8 bits (120), Expect(3) = 4e-13
 Identities = 21/47 (44%), Positives = 29/47 (61%)
 Frame = -3

Query: 295 GSRVKAVAICHSDTSQWSLKHLAFQVLKVQQGTFPVCHILQQGQVVW 341
           G  +K + +CH DTS+W   H AF  LKV+ GT PV   L +G ++W
Sbjct: 311 GLGLKPLLVCHQDTSKWDPNHAAFPDLKVKPGTVPVSQFLPEGPLLW 171



 Score = 30.0 bits (66), Expect(3) = 4e-13
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -2

Query: 286 YSVPLEGADGSRVKAVA 302
           Y VPLEG DG RVKAVA
Sbjct: 339 YFVPLEGEDGVRVKAVA 289



 Score = 28.9 bits (63), Expect(3) = 4e-13
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 265 CHKRNYPYAVFYCH 278
           CH   YPY VF+CH
Sbjct: 403 CHPMAYPYGVFWCH 362


>TC13199 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing protein
           (Fragment), partial (19%)
          Length = 426

 Score = 63.9 bits (154), Expect = 4e-11
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = +2

Query: 2   INVVLQLALVATHATLPPELYWKSKLPTTQIPKAITDILH 41
           I ++L LALVAT A+L PELYWKSKLPTT +PKAITD+LH
Sbjct: 74  IFMLLNLALVATQASLTPELYWKSKLPTTPMPKAITDLLH 193


>BP042359 
          Length = 404

 Score = 60.1 bits (144), Expect = 5e-10
 Identities = 29/75 (38%), Positives = 39/75 (51%), Gaps = 3/75 (4%)
 Frame = -3

Query: 270 YPYAVFYCHKTDATKVYSVPLEGADGSRVK---AVAICHSDTSQWSLKHLAFQVLKVQQG 326
           YPY ++YCH     +VY   +   D +++K    VAICH DTS W  +H AF  L    G
Sbjct: 402 YPYLLYYCHSVPQVRVYEAEILDVD-TKLKINHGVAICHLDTSAWGPEHGAFVALGAGPG 226

Query: 327 TFPVCHILQQGQVVW 341
              VCH + Q  + W
Sbjct: 225 KIEVCHWIFQNDMTW 181


>TC19611 
          Length = 533

 Score = 57.4 bits (137), Expect = 3e-09
 Identities = 29/71 (40%), Positives = 42/71 (58%)
 Frame = -3

Query: 133 FLLEKDLHHGTKFNIQFTKTSDHGPTFLPGDVANSIPFSSNKLENILNYFSIKQGSTESE 192
           F  E  LH G KFN+   K     P +LP ++A+ IPFS +K+  IL   S+K  S  +E
Sbjct: 216 FFEEYQLHAGNKFNVNLNKIKSVVP-WLPREIADHIPFSLDKMNEILEMLSVKLESKNAE 40

Query: 193 IVKNTISECEA 203
           +V+ TI +CE+
Sbjct: 39  MVEKTIGDCES 7



 Score = 37.4 bits (85), Expect = 0.004
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -2

Query: 10  LVATHATLPPELYWKSKLPTTQIPKAITDI 39
           ++     LP EL WK KLP T +PKAIT++
Sbjct: 466 VMTAQGALPAELDWKRKLPATPVPKAITEL 377


>AV769292 
          Length = 250

 Score = 47.0 bits (110), Expect = 5e-06
 Identities = 20/28 (71%), Positives = 23/28 (81%)
 Frame = -3

Query: 310 QWSLKHLAFQVLKVQQGTFPVCHILQQG 337
           +W+LKHLAFQVLKV+ GT  VCH L QG
Sbjct: 248 KWNLKHLAFQVLKVKPGTVSVCHFLPQG 165


>TC12015 weakly similar to UP|O65009 (O65009) BURP domain containing
           protein, partial (12%)
          Length = 464

 Score = 45.1 bits (105), Expect = 2e-05
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 300 AVAICHSDTSQWSLKHLAFQVLKVQQGTFPVCHILQQGQVVW 341
           A+ +CH DTS W+  H+ F+ L ++ G  PVCH      ++W
Sbjct: 1   ALGVCHLDTSDWTPSHIIFKQLGIEAGKAPVCHFFPIKHLMW 126


>AV771878 
          Length = 560

 Score = 42.4 bits (98), Expect = 1e-04
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = +2

Query: 6  LQLALVATHATLPPELYWKSKLPTTQIPKAITDIL 40
          L + ++  +A LPP+L WK  LPTT +PKAIT+ L
Sbjct: 50 LSMMVMLAYAALPPQLDWKMMLPTTPVPKAITEQL 154



 Score = 29.6 bits (65), Expect = 0.77
 Identities = 15/42 (35%), Positives = 24/42 (56%)
 Frame = +1

Query: 127 NRNLAMFLLEKDLHHGTKFNIQFTKTSDHGPTFLPGDVANSI 168
           N++   F  E++LH GTK ++Q +K     P  LP  +A+ I
Sbjct: 436 NKSRCYFSFEENLHPGTKLDLQLSKRKPAVP-ILPRTIADQI 558


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.326    0.140    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,678,474
Number of Sequences: 28460
Number of extensions: 69640
Number of successful extensions: 462
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of query: 343
length of database: 4,897,600
effective HSP length: 91
effective length of query: 252
effective length of database: 2,307,740
effective search space: 581550480
effective search space used: 581550480
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)