BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148532.2 - phase: 0
(356 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BU494388 155 1e-38
AV429083 51 3e-07
AV772727 46 8e-06
BP040806 45 1e-05
TC19987 weakly similar to UP|Q7XJT3 (Q7XJT3) At2g17140 protein, ... 45 2e-05
BP035488 42 2e-04
AV417736 42 2e-04
BP044414 40 6e-04
AV766731 40 6e-04
AV779633 39 0.001
BI418759 38 0.003
AV421386 36 0.009
TC15322 weakly similar to UP|Q9LG23 (Q9LG23) F14J16.14 (At1g5589... 36 0.009
BP047039 34 0.043
TC13038 33 0.073
BP042107 33 0.073
AV422763 33 0.096
BP048543 31 0.28
AV425299 31 0.28
AV421658 30 0.47
>BU494388
Length = 350
Score = 155 bits (392), Expect = 1e-38
Identities = 76/90 (84%), Positives = 83/90 (91%)
Frame = +2
Query: 18 VLEWILEKLLKENVKDHGRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLIS 77
VLEWILEK+LKENVKDH FSELI LCGKLKN+ LG+ VFTSME +GVKP+SLVFNSLIS
Sbjct: 80 VLEWILEKMLKENVKDHSLFSELILLCGKLKNLPLGMRVFTSMETIGVKPSSLVFNSLIS 259
Query: 78 ACLSSHDIVTAYSLFEIMESSENYKPDFHT 107
ACLSS+DIVTAYSLFEIMESSE+YKPD HT
Sbjct: 260 ACLSSNDIVTAYSLFEIMESSESYKPDLHT 349
Score = 28.9 bits (63), Expect = 1.4
Identities = 18/78 (23%), Positives = 30/78 (38%)
Frame = +2
Query: 124 MLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLK 183
+L W K D F +I C KN + RVF M+ + P+ + S++
Sbjct: 80 VLEWILEKMLKENVKDHSLFSELILLCGKLKNLPLGMRVFTSMETIGVKPSSLVFNSLIS 259
Query: 184 GFCSQKSLCRANEFFKFV 201
S + A F+ +
Sbjct: 260 ACLSSNDIVTAYSLFEIM 313
>AV429083
Length = 316
Score = 51.2 bits (121), Expect = 3e-07
Identities = 30/99 (30%), Positives = 44/99 (44%)
Frame = +3
Query: 91 LFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGC 150
LF+ ME N KPD T+N + A K G V + G+ PDL T+ +++ G
Sbjct: 3 LFKEMELKNNIKPDVSTFNILVDALCKKGKVKHAKNVLAVMIKQGVAPDLVTYSTLLDGY 182
Query: 151 VNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQK 189
+K+ V M + PNV ++ GFC K
Sbjct: 183 CLTKDMYKGKYVLNAMGRVGVTPNVDSYNIVINGFCKVK 299
>AV772727
Length = 528
Score = 46.2 bits (108), Expect = 8e-06
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = -2
Query: 107 TYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEM 166
TY++ + A K+ +VD +A K G+ PD+ T+ +I G S + A +F+++
Sbjct: 521 TYHSLLDALCKNHHVDKAIALLERVKDKGIQPDMYTYNIIIDGLCKSGRVKDAQELFQDL 342
Query: 167 KISEMIPNVTILESMLKGFC 186
I NV M+ G C
Sbjct: 341 LIKGYRLNVVTYNIMINGLC 282
Score = 36.6 bits (83), Expect = 0.007
Identities = 23/89 (25%), Positives = 43/89 (47%), Gaps = 1/89 (1%)
Frame = -2
Query: 70 LVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYS 129
+ ++SL+ A +H + A +L E ++ + +PD +TYN I KSG V +
Sbjct: 524 ITYHSLLDALCKNHHVDKAIALLERVKD-KGIQPDMYTYNIIIDGLCKSGRVKDAQELFQ 348
Query: 130 AKKATGLGPDLQTFESVISG-CVNSKNYE 157
G ++ T+ +I+G C+ + E
Sbjct: 347 DLLIKGYRLNVVTYNIMINGLCIEGLSDE 261
>BP040806
Length = 534
Score = 45.4 bits (106), Expect = 1e-05
Identities = 31/132 (23%), Positives = 58/132 (43%)
Frame = +1
Query: 35 GRFSELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEI 94
G + +L L GK +FT+M G P+ + +L++A S+ + A+S+
Sbjct: 91 GTYMKLXVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNE 270
Query: 95 MESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSK 154
M++ +PD TY+ I + D + Y A + P+ T V+SG +
Sbjct: 271 MKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 450
Query: 155 NYEIADRVFEEM 166
++ ++V M
Sbjct: 451 KFDQMEKVLSSM 486
Score = 42.0 bits (97), Expect = 2e-04
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +1
Query: 88 AYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGL-GPDLQTFESV 146
A LF M E P TY ++A+ +S +D + + K L PD+ T+ ++
Sbjct: 145 ARQLFTTM-IEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTL 321
Query: 147 ISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGF 185
I CV++ +++ + ++E+M ++PN +L G+
Sbjct: 322 IKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 438
>TC19987 weakly similar to UP|Q7XJT3 (Q7XJT3) At2g17140 protein, partial
(12%)
Length = 350
Score = 45.1 bits (105), Expect = 2e-05
Identities = 28/101 (27%), Positives = 41/101 (39%)
Frame = +3
Query: 50 VQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYN 109
+ + V ME G T +NSLI S I Y L + M PD TYN
Sbjct: 48 ISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRE-RGICPDICTYN 224
Query: 110 NFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGC 150
N IS + G + + G+ P++ +F+ +I C
Sbjct: 225 NVISCLCEGGKTEDATSLLHEMLDKGISPNISSFKILIKSC 347
Score = 39.7 bits (91), Expect = 8e-04
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +3
Query: 107 TYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEM 166
TYN+ I G + M + G+ PD+ T+ +VIS E A + EM
Sbjct: 111 TYNSLILGLGSKGQIFEMYGLMDEMRERGICPDICTYNNVISCLCEGGKTEDATSLLHEM 290
Query: 167 KISEMIPNVTILESMLKGFC 186
+ PN++ + ++K C
Sbjct: 291 LDKGISPNISSFKILIKSCC 350
Score = 33.9 bits (76), Expect = 0.043
Identities = 19/80 (23%), Positives = 35/80 (43%)
Frame = +3
Query: 107 TYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEM 166
TY+ FI F K G + + L + G LQT+ S+I G + + +EM
Sbjct: 6 TYDTFIWKFCKEGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEM 185
Query: 167 KISEMIPNVTILESMLKGFC 186
+ + P++ +++ C
Sbjct: 186 RERGICPDICTYNNVISCLC 245
>BP035488
Length = 534
Score = 42.0 bits (97), Expect = 2e-04
Identities = 27/97 (27%), Positives = 40/97 (40%), Gaps = 2/97 (2%)
Frame = +3
Query: 102 KPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLG--PDLQTFESVISGCVNSKNYEIA 159
+PD TY FI A +K G + L + G PD+ +I K A
Sbjct: 165 RPDLFTYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEA 344
Query: 160 DRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANE 196
VF++MK PNV S++K C + + + E
Sbjct: 345 LEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYE 455
Score = 30.4 bits (67), Expect = 0.47
Identities = 31/149 (20%), Positives = 59/149 (38%), Gaps = 2/149 (1%)
Frame = +3
Query: 88 AYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVI 147
A +LF D T+N ++ + GN + A+ PDL T+ + I
Sbjct: 18 AETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFI 197
Query: 148 SGCVNSKNYEIADRVFEEM--KISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNR 205
A ++F M + P+V I ++ C +K + A E F+ + +
Sbjct: 198 KALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERG 377
Query: 206 WQISETMAAMLVVLYHEQGQVEKMEELLE 234
+ + L+ + ++EK+ EL+E
Sbjct: 378 CEPNVATYNSLIKHLCKIRRMEKVYELVE 464
>AV417736
Length = 428
Score = 42.0 bits (97), Expect = 2e-04
Identities = 24/95 (25%), Positives = 46/95 (48%)
Frame = +1
Query: 102 KPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADR 161
+PD H Y+ + +SG A ++ + GL P++ F ++ISG + + A R
Sbjct: 46 EPDIHAYSILAKGYVRSGQPGKAEALLTSMRKYGLQPNVVIFTTIISGWCTAGKMDRAVR 225
Query: 162 VFEEMKISEMIPNVTILESMLKGFCSQKSLCRANE 196
+ E+M + N+ E+++ G+ K +A E
Sbjct: 226 LHEKMHEMGIPSNLKTYETLMWGYGEAKQPWKAEE 330
Score = 35.8 bits (81), Expect = 0.011
Identities = 26/102 (25%), Positives = 46/102 (44%)
Frame = +1
Query: 135 GLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRA 194
G+ PD+ + + G V S A+ + M+ + PNV I +++ G+C+ + RA
Sbjct: 40 GIEPDIHAYSILAKGYVRSGQPGKAEALLTSMRKYGLQPNVVIFTTIISGWCTAGKMDRA 219
Query: 195 NEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEKMEELLETI 236
+ + + + L+ Y E Q K EELL T+
Sbjct: 220 VRLHEKMHEMGIPSNLKTYETLMWGYGEAKQPWKAEELLVTM 345
>BP044414
Length = 536
Score = 40.0 bits (92), Expect = 6e-04
Identities = 24/108 (22%), Positives = 46/108 (42%)
Frame = -1
Query: 99 ENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEI 158
++ KPD + N I F GN+D W+ + + PD TF +++ + +
Sbjct: 503 KDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLKT 324
Query: 159 ADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRW 206
A V +E+ + +L+ ++ S+ L A E + NR+
Sbjct: 323 AIDVVKEIFNTRCRVGAPLLQLVVDKLVSESMLSEAKEIVELGKTNRY 180
Score = 28.1 bits (61), Expect = 2.4
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -1
Query: 54 INVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFIS 113
+ ME VKP N++I ++ ++ A F +E SEN PD +T+ +
Sbjct: 530 VEFLQEMEKKDVKPDLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSEN-DPDKNTFATLVP 354
Query: 114 AFSKSGNV 121
+ G++
Sbjct: 353 FLCEKGDL 330
>AV766731
Length = 576
Score = 40.0 bits (92), Expect = 6e-04
Identities = 26/125 (20%), Positives = 55/125 (43%)
Frame = -3
Query: 109 NNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKI 168
N+ I+ K+ + + TG DL T S+ G + A +F ++K
Sbjct: 535 NSLINGLCKARRISCAVELVDVMHETGPPADLITTNSLFDGLCKHHLLDKAIALFMKVKD 356
Query: 169 SEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVVLYHEQGQVEK 228
++ PN+ ++ G C L A E F+ +L + ++ +++ Y ++G +++
Sbjct: 355 PKIQPNIPPYPVIIDGLCKVGRLKIAQEIFQVLLSEGYNLNVMTYTVMINGYCKEGLLDE 176
Query: 229 MEELL 233
+ LL
Sbjct: 175 AQALL 161
>AV779633
Length = 440
Score = 39.3 bits (90), Expect = 0.001
Identities = 25/97 (25%), Positives = 40/97 (40%), Gaps = 20/97 (20%)
Frame = -2
Query: 64 GVKPTSLVFNSLISACLSSHDIVTAYSLF--------------------EIMESSENYKP 103
GVKP + +NSL+ + D+V A SLF + + N +P
Sbjct: 325 GVKPDIVSYNSLLKGFCKAGDLVRAESLFDEILGFQRDGESGQLKNNAVDTRDELRNIRP 146
Query: 104 DFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDL 140
TY ISA+ K ++ + Y +G+ PD+
Sbjct: 145 TLATYTTLISAYGKHCGIEESRSLYEQMVMSGIMPDV 35
Score = 30.0 bits (66), Expect = 0.62
Identities = 18/68 (26%), Positives = 30/68 (43%)
Frame = -2
Query: 135 GLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRA 194
G+ D+ ++I G + A + E + + P++ S+LKGFC L RA
Sbjct: 430 GIARDVIGLNTLIDGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDLVRA 251
Query: 195 NEFFKFVL 202
F +L
Sbjct: 250 ESLFDEIL 227
Score = 30.0 bits (66), Expect = 0.62
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -2
Query: 109 NNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEM 166
N I + ++G + LA TG+ PD+ ++ S++ G + + A+ +F+E+
Sbjct: 403 NTLIDGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDLVRAESLFDEI 230
>BI418759
Length = 543
Score = 37.7 bits (86), Expect = 0.003
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +2
Query: 72 FNSLISACLSS---HDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWY 128
FN +++ C + H+ + + +S+ + D YNN IS F ++G + +
Sbjct: 242 FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 421
Query: 129 SAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEM 166
+ L PD+ T ++I + + + A +VF M
Sbjct: 422 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 535
>AV421386
Length = 312
Score = 36.2 bits (82), Expect = 0.009
Identities = 26/91 (28%), Positives = 41/91 (44%)
Frame = +1
Query: 109 NNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKI 168
N ISA KS +++ L Y + P T+ I G + ++ + A + FEEM
Sbjct: 1 NIIISALVKSNSLNKALDLYYELISGDFSPTPCTYGPFIDGPLKAERCDEALKFFEEMLD 180
Query: 169 SEMIPNVTILESMLKGFCSQKSLCRANEFFK 199
+ PN I ++ GF + A +FFK
Sbjct: 181 YQCKPNSAIYNILINGFGKAGKIDIACDFFK 273
Score = 35.4 bits (80), Expect = 0.015
Identities = 22/97 (22%), Positives = 41/97 (41%)
Frame = +1
Query: 46 KLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDF 105
K ++ ++++ + PT + I L + A FE M + KP+
Sbjct: 25 KSNSLNKALDLYYELISGDFSPTPCTYGPFIDGPLKAERCDEALKFFEEMLDYQ-CKPNS 201
Query: 106 HTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQT 142
YN I+ F K+G +D ++ G+ PDL++
Sbjct: 202 AIYNILINGFGKAGKIDIACDFFKRMVKEGIRPDLKS 312
>TC15322 weakly similar to UP|Q9LG23 (Q9LG23) F14J16.14
(At1g55890/F14J16_4), partial (33%)
Length = 588
Score = 36.2 bits (82), Expect = 0.009
Identities = 28/93 (30%), Positives = 41/93 (43%), Gaps = 6/93 (6%)
Frame = +2
Query: 29 ENVKDHGRFSE------LIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSS 82
E+ K + FS+ LI L GK + +F M T L FN+L++A L S
Sbjct: 308 EHQKQYSDFSKEGFSARLITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAYLHS 487
Query: 83 HDIVTAYSLFEIMESSENYKPDFHTYNNFISAF 115
+F+ + + KPD +YN I AF
Sbjct: 488 KQYRVVERIFKEVPGEISVKPDLVSYNTVIKAF 586
>BP047039
Length = 527
Score = 33.9 bits (76), Expect = 0.043
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = -3
Query: 99 ENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEI 158
+ Y + TYN I+ K G D L S + G D TFE++IS +
Sbjct: 513 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 334
Query: 159 ADRVFEEMKISEMI 172
A+++ EM +++
Sbjct: 333 AEKLLREMIARDLL 292
>TC13038
Length = 419
Score = 33.1 bits (74), Expect = 0.073
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 145 SVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLK 183
+ I CV SKN++ A ++EEMK E+ PN ++LK
Sbjct: 3 AAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 119
>BP042107
Length = 515
Score = 33.1 bits (74), Expect = 0.073
Identities = 29/155 (18%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Frame = +1
Query: 63 VGVKPTSLVFNSLI------SACLSSHDIVTAYSLFEIME----SSENYKPDFHTYNNFI 112
V VKP++L S++ ++ ++ + +++ SLF + S+ + P FH+ +
Sbjct: 13 VVVKPSTLE*CSVLWCGEQSTSHINENAAMSSSSLFRLTRFPILSNPTFLPSFHSVPHSF 192
Query: 113 SAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEMKISEMI 172
NVD +++++ P + F +++ V K+Y A + +M++ +
Sbjct: 193 H------NVDDAVSFFNRMLQMHPTPSIIEFSMILTSLVKMKHYSTAISLSHQMELKGIR 354
Query: 173 PNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQ 207
P++ ++ +C L A +L +Q
Sbjct: 355 PDIVTSSILINCYCHLGQLTSAFSVMGNILKRGYQ 459
Score = 26.9 bits (58), Expect = 5.2
Identities = 22/106 (20%), Positives = 42/106 (38%)
Frame = +1
Query: 81 SSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDL 140
S H++ A S F M P ++ +++ K + ++ + G+ PD+
Sbjct: 187 SFHNVDDAVSFFNRMLQMHP-TPSIIEFSMILTSLVKMKHYSTAISLSHQMELKGIRPDI 363
Query: 141 QTFESVISGCVNSKNYEIADRVFEEMKISEMIPNVTILESMLKGFC 186
T +I+ + A V + PN IL +++KG C
Sbjct: 364 VTSSILINCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGLC 501
>AV422763
Length = 410
Score = 32.7 bits (73), Expect = 0.096
Identities = 29/119 (24%), Positives = 56/119 (46%), Gaps = 7/119 (5%)
Frame = +2
Query: 72 FNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAK 131
F ++A +++ D+ L ME+ D++TY+ + + K+GNV+ LA
Sbjct: 44 FTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKS 223
Query: 132 KATGLGPDLQ-TFESVISGCVNSKNYEIADRVFEEMKISEMIPN------VTILESMLK 183
+ + G L+ +ES+ S N + R++ +K +PN + +L S+LK
Sbjct: 224 EQSVKGKKLRLAYESLQSTYAAIGNNDEVYRLWNRIK---NLPNCWNSSYICMLSSLLK 391
>BP048543
Length = 547
Score = 31.2 bits (69), Expect = 0.28
Identities = 24/140 (17%), Positives = 55/140 (39%), Gaps = 19/140 (13%)
Frame = +2
Query: 103 PDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRV 162
P +NN + + + + ++ + G+ PD+ T +I+ + A V
Sbjct: 74 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 253
Query: 163 FEEMKISEMIPNVTILESMLKGFCSQKSLCRANEF-------------------FKFVLD 203
++ P+ T L +++KG C + A F ++F+++
Sbjct: 254 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 433
Query: 204 NRWQISETMAAMLVVLYHEQ 223
++ ET AA+ ++ E+
Sbjct: 434 ELCEVGETGAALQLLRQIEE 493
>AV425299
Length = 323
Score = 31.2 bits (69), Expect = 0.28
Identities = 18/83 (21%), Positives = 40/83 (47%), Gaps = 1/83 (1%)
Frame = +3
Query: 104 DFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVF 163
D T + + + K GN++ + G PD++ + S+I G VN+ + + + +
Sbjct: 24 DASTASALVHLYCKVGNLERAKEAFEVLTRKGFQPDIKVYNSMIMGYVNAGDPKAGESLM 203
Query: 164 EEMKISEMI-PNVTILESMLKGF 185
++M+ I P I ++L+ +
Sbjct: 204 KKMEERGGIKPTKEIYTALLRAY 272
>AV421658
Length = 281
Score = 30.4 bits (67), Expect = 0.47
Identities = 23/80 (28%), Positives = 33/80 (40%), Gaps = 2/80 (2%)
Frame = +1
Query: 97 SSENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKAT--GLGPDLQTFESVISGCVNSK 154
+ + PD TYN IS F K D A+ + G+ PD T+E +I +
Sbjct: 10 TERDLSPDVVTYNTLISKFCKLKEPDLEKAFEMKAEMVHKGILPDADTYEPLIRTLCLQQ 189
Query: 155 NYEIADRVFEEMKISEMIPN 174
A +F EM + PN
Sbjct: 190 RLSEAYDLFREMLRWGVSPN 249
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.321 0.137 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,735,645
Number of Sequences: 28460
Number of extensions: 53681
Number of successful extensions: 302
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of query: 356
length of database: 4,897,600
effective HSP length: 91
effective length of query: 265
effective length of database: 2,307,740
effective search space: 611551100
effective search space used: 611551100
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Medicago: description of AC148532.2