TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148532.13 + phase: 0 
         (303 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC8082 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-...   243  4e-65
TC17232 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific ...   238  7e-64
TC19645 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing pro...   160  1e-54
TC14280 weakly similar to UP|Q94IC5 (Q94IC5) BURP domain-contain...   202  7e-53
TC10107 similar to UP|Q9MB24 (Q9MB24) S1-3 protein (Fragment), p...   194  1e-50
AV779646                                                              156  4e-39
BP045414                                                              122  1e-28
TC16074 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein...   105  1e-23
TC16694 similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein...    91  4e-23
TC17468 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific ...   101  1e-22
AV780764                                                               94  4e-20
AV770881                                                               62  1e-16
TC9286 similar to UP|O65009 (O65009) BURP domain containing prot...    78  2e-15
TC13199 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing pro...    75  2e-14
BE122612                                                               72  1e-13
BP042359                                                               65  1e-11
TC19611                                                                64  4e-11
TC12015 weakly similar to UP|O65009 (O65009) BURP domain contain...    60  3e-10
AV769292                                                               51  3e-07
AV418436                                                               45  2e-05

>TC8082 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-3, partial
            (54%)
          Length = 1913

 Score =  243 bits (619), Expect = 4e-65
 Identities = 120/242 (49%), Positives = 158/242 (64%)
 Frame = +1

Query: 62   VNVGVGRSPFIYNYAASETQLHDKPNVALFFLEKDLHHGTKLNLQFSKTTSNAATFLPRQ 121
            + + VG+     N  AS+  LH+      FF E  LH   K  +  +K  S+    LPRQ
Sbjct: 910  LRIYVGKESQHENSGASDHHLHEISARVGFFQEDQLHSDNKFYMHLNKIRSSIP-LLPRQ 1086

Query: 122  VANSIPFSSNKMEYIINKLNIKKGSKGVQIVKNTISECEEQGIKGEEKVCVTSLESMVDF 181
            +   IPFS +KM+ ++  L++K  SK  +I++ TIS CE   + GEEK C TSLESM+DF
Sbjct: 1087 ITQQIPFSLDKMKEVLEMLSVKPNSKNAEIMEKTISGCEAPAMDGEEKYCATSLESMMDF 1266

Query: 182  TTSKLGKNVEAVSTEVNKESNLQQYTIASGVKKLGEKNKAVVCHKENYPYAVFYCHKTDT 241
             TSKLGKNV A+ST+V KE+ LQ   +  GVKKL + +  + CH   YPY VF CH+   
Sbjct: 1267 VTSKLGKNVHAMSTDVQKETKLQNLLVKDGVKKLADDH-VIACHPLAYPYVVFGCHELQK 1443

Query: 242  TKAYSVPLEGADGSRVKAIAVCHTDTSEWNPKHLAFQVLKVQPGTVPVCHLLPEDHVVWI 301
            T AY VPLEG DG RVKA+AVCH DTS+W+P ++AF+VLKV+PGTVPVCH  PE H++W+
Sbjct: 1444 TSAYFVPLEGEDGVRVKAVAVCHKDTSKWDPNYVAFRVLKVKPGTVPVCHFFPEGHLLWL 1623

Query: 302  RK 303
             K
Sbjct: 1624 SK 1629



 Score = 43.1 bits (100), Expect = 6e-05
 Identities = 16/24 (66%), Positives = 21/24 (86%)
 Frame = +1

Query: 2   LPPQLYWKSMLPNSPMPKAITNLL 25
           LPP++YWK MLP++PMPKA+  LL
Sbjct: 97  LPPEIYWKMMLPSTPMPKAVIELL 168


>TC17232 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2,
           partial (33%)
          Length = 966

 Score =  238 bits (608), Expect = 7e-64
 Identities = 124/252 (49%), Positives = 166/252 (65%), Gaps = 3/252 (1%)
 Frame = +3

Query: 55  YEGGGTDVNVGVGRSPFIYNYAAS-ETQLHDKPNVALFFLEKDLHHGTKLNLQFSKTTSN 113
           Y+ G  ++ +    + + Y   AS    LH+K    +FF E++LH GTKL+LQ SK    
Sbjct: 24  YKIGAKEIQLHDDTNLYGYKSGASLHKLLHEKTKAGVFFFEENLHPGTKLDLQLSKRKP- 200

Query: 114 AATFLPRQVANSIPFSSNKMEYIINKLNIKKGSKGVQIVKNTISECEEQGIKGEEKVCVT 173
           A   LPR++A+ IPFS  K++ I+  L +K  SK  +IV+ T+  CE   ++GEE++C T
Sbjct: 201 AVPILPRKIADQIPFSLEKLKEILEILVVKPDSKNTEIVEKTMGGCELPSMEGEEQMCAT 380

Query: 174 SLESMVDFTTSKLGKNVEAVSTEVN--KESNLQQYTIASGVKKLGEKNKAVVCHKENYPY 231
           SLES+VDF  SKLGKNV A+STEV   KE+  Q   +  GVKKL +   AV CH   YPY
Sbjct: 381 SLESLVDFIASKLGKNVLAISTEVELEKETQSQNLLVKDGVKKLADDGMAV-CHPMTYPY 557

Query: 232 AVFYCHKTDTTKAYSVPLEGADGSRVKAIAVCHTDTSEWNPKHLAFQVLKVQPGTVPVCH 291
            V + HK   T AY VPLEG DG+RVKA+AVCH DTS+W+P H++F  L V+PGTVPVCH
Sbjct: 558 PVCFSHKLVKTSAYFVPLEGEDGARVKAVAVCHRDTSKWDPNHVSFPDLNVKPGTVPVCH 737

Query: 292 LLPEDHVVWIRK 303
           +LPE H++W+ K
Sbjct: 738 VLPERHLLWVPK 773


>TC19645 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing protein
           (Fragment), partial (38%)
          Length = 619

 Score =  160 bits (406), Expect(2) = 1e-54
 Identities = 81/112 (72%), Positives = 98/112 (87%), Gaps = 2/112 (1%)
 Frame = +3

Query: 101 TKLNLQFSKTTSNAAT--FLPRQVANSIPFSSNKMEYIINKLNIKKGSKGVQIVKNTISE 158
           TKLNLQF+KT+++AA   FLPRQVA+SIPFSSNK++ ++NK ++K GS+  +IVKNTI+E
Sbjct: 120 TKLNLQFTKTSNDAAATFFLPRQVADSIPFSSNKVDDVLNKFSLKPGSEEAEIVKNTIAE 299

Query: 159 CEEQGIKGEEKVCVTSLESMVDFTTSKLGKNVEAVSTEVNKESNLQQYTIAS 210
           CEE G+ GEEK CVTSLESMVDFTTSKLGKNVEAVST+VNKE  LQQYTI +
Sbjct: 300 CEEPGVVGEEKRCVTSLESMVDFTTSKLGKNVEAVSTDVNKEKELQQYTIXA 455



 Score = 68.9 bits (167), Expect(2) = 1e-54
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = +2

Query: 67  GRSPFIYNYAASETQLHDKPNVALFFLEKDLHHGTKLNL 105
           G SPF YNYAASETQLH+ PNVALFFLEKDLH G K+ L
Sbjct: 17  GHSPFDYNYAASETQLHENPNVALFFLEKDLHQGNKIEL 133


>TC14280 weakly similar to UP|Q94IC5 (Q94IC5) BURP domain-containing protein
           (Fragment), partial (54%)
          Length = 723

 Score =  202 bits (513), Expect = 7e-53
 Identities = 114/216 (52%), Positives = 140/216 (64%), Gaps = 44/216 (20%)
 Frame = +2

Query: 2   LPPQLYWKSMLPNSPMPKAITNLLHPAGYWSEEKGT---------------------WVD 40
           LPP+LYWKS+LP +PMPKAIT++L+P  +W E+K T                      VD
Sbjct: 83  LPPELYWKSVLPTTPMPKAITDILYP--HWVEDKSTNVGVRKGGVNVDAGKGKPGHTKVD 256

Query: 41  VGKGGVDVGVRKGYYEG-GGTDVNVGVGR----------------------SPFIYNYAA 77
           VGKGGV+V   KG   G GGT+VNVG G+                      SPF Y YAA
Sbjct: 257 VGKGGVNVNAGKGSGGGHGGTNVNVGGGKGGGVSVHTGHKGKPVFVNVGSKSPFDYVYAA 436

Query: 78  SETQLHDKPNVALFFLEKDLHHGTKLNLQFSKTTSNAATFLPRQVANSIPFSSNKMEYII 137
           +ETQLH  PNVALFFLEK+LH GTK+NL F+KT SN ATFLPR VA+SIPFSS K+E  +
Sbjct: 437 TETQLHSDPNVALFFLEKNLHPGTKMNLHFTKT-SNKATFLPRIVADSIPFSSEKVELAL 613

Query: 138 NKLNIKKGSKGVQIVKNTISECEEQGIKGEEKVCVT 173
           NK ++K GS+  Q++KNTI ECE++GI+GEEK C T
Sbjct: 614 NKYSVKAGSEEAQVMKNTIDECEQKGIQGEEKYCAT 721


>TC10107 similar to UP|Q9MB24 (Q9MB24) S1-3 protein (Fragment), partial
           (65%)
          Length = 575

 Score =  194 bits (494), Expect = 1e-50
 Identities = 88/112 (78%), Positives = 102/112 (90%)
 Frame = +2

Query: 192 AVSTEVNKESNLQQYTIASGVKKLGEKNKAVVCHKENYPYAVFYCHKTDTTKAYSVPLEG 251
           AVST V+KE+  Q+YTIA+GVKKL   +KAVVCHK+NYPYAVFYCHK+D+T+AYSVPLEG
Sbjct: 2   AVSTVVDKETEKQRYTIATGVKKLEAGDKAVVCHKQNYPYAVFYCHKSDSTRAYSVPLEG 181

Query: 252 ADGSRVKAIAVCHTDTSEWNPKHLAFQVLKVQPGTVPVCHLLPEDHVVWIRK 303
            +G RVKA+AVCHTDTS+WNPKHLAFQVLKV+PGTVPVCH LPEDHVVW+ K
Sbjct: 182 DNGVRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVSK 337


>AV779646 
          Length = 510

 Score =  156 bits (395), Expect = 4e-39
 Identities = 73/121 (60%), Positives = 88/121 (72%)
 Frame = -3

Query: 181 FTTSKLGKNVEAVSTEVNKESNLQQYTIASGVKKLGEKNKAVVCHKENYPYAVFYCHKTD 240
           F TSKLG +V A+STEV KE+ L    +  GV+KL + +   VCH   YPY VF+CHK  
Sbjct: 508 FITSKLGNDVHAMSTEVTKETKLLYLLVKDGVEKLAD-DYITVCHPMAYPYVVFWCHKLQ 332

Query: 241 TTKAYSVPLEGADGSRVKAIAVCHTDTSEWNPKHLAFQVLKVQPGTVPVCHLLPEDHVVW 300
            T AY VPLEG DG RVKA+AVCH DTS+W+P H AFQ LKV+PGTVPVCH LPE H++W
Sbjct: 331 KTDAYFVPLEGEDGVRVKAVAVCHKDTSKWDPNHAAFQDLKVKPGTVPVCHFLPEGHLLW 152

Query: 301 I 301
           +
Sbjct: 151 L 149


>BP045414 
          Length = 478

 Score =  122 bits (305), Expect = 1e-28
 Identities = 56/91 (61%), Positives = 68/91 (74%)
 Frame = -2

Query: 211 GVKKLGEKNKAVVCHKENYPYAVFYCHKTDTTKAYSVPLEGADGSRVKAIAVCHTDTSEW 270
           GVKKL +   AV CH   YPYAVF+CHK   T AY VPLEG DG+RV  +AVC  DTS+W
Sbjct: 471 GVKKLPDDGIAV-CHPLTYPYAVFFCHKLVKTSAYFVPLEGEDGARV*PVAVCPRDTSKW 295

Query: 271 NPKHLAFQVLKVQPGTVPVCHLLPEDHVVWI 301
           +P H++F  L VQPGTVPVCH+LPE H++W+
Sbjct: 294 DPNHVSFPDLHVQPGTVPVCHVLPERHLLWV 202


>TC16074 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-3, partial
           (6%)
          Length = 844

 Score =  105 bits (261), Expect = 1e-23
 Identities = 63/160 (39%), Positives = 92/160 (57%), Gaps = 5/160 (3%)
 Frame = +2

Query: 83  HDKPNVALFFLEKDLHHGTKLNLQFS-KTTSNAATFLPRQVANSIPFSSNKMEYIINKLN 141
           H  P + +FF+ KDL  G K+ + FS K +S +  FLPR+ AN IPFSS ++  ++N  +
Sbjct: 353 HMDPELHVFFIPKDLKVGKKMPIYFSMKDSSTSPKFLPREEANQIPFSSKQLPSLLNFFS 532

Query: 142 IKKGSKGVQIVKNTISECEEQGIKGEEKVCVTSLESMVDFTTSKLGKNVE---AVSTEVN 198
           I K S   + +K T+ +CE + ++GE K C TSLES++D      G + +     +T + 
Sbjct: 533 IPKNSPQAKAMKYTLEQCEFEPMEGETKFCATSLESLLDSARHLFGLSPQFKVLTTTHLT 712

Query: 199 KES-NLQQYTIASGVKKLGEKNKAVVCHKENYPYAVFYCH 237
           K    LQ YTI   VK+    N  + CH   YP+AVFYCH
Sbjct: 713 KSHVLLQNYTILE-VKENRVPN-VIGCHPMPYPFAVFYCH 826


>TC16694 similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2, partial
           (12%)
          Length = 488

 Score = 90.9 bits (224), Expect(2) = 4e-23
 Identities = 38/57 (66%), Positives = 45/57 (78%)
 Frame = +1

Query: 245 YSVPLEGADGSRVKAIAVCHTDTSEWNPKHLAFQVLKVQPGTVPVCHLLPEDHVVWI 301
           Y VPLEG DG RV  +AVCH DTS+W+P H AF  LKV+PGTVPVCH LPE H++W+
Sbjct: 106 YFVPLEGEDGVRVNHVAVCHQDTSKWDPNHAAFPDLKVKPGTVPVCHFLPEGHLLWL 276



 Score = 33.1 bits (74), Expect(2) = 4e-23
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +3

Query: 211 GVKKLGEKNKAVVCHKENYPYAVFYCHKTDTTKA 244
           GV+KL + +   VCH   YPY VF+CH    T A
Sbjct: 6   GVEKLAD-DYITVCHPMAYPYLVFWCH*LPKTHA 104


>TC17468 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2,
           partial (11%)
          Length = 652

 Score =  101 bits (252), Expect = 1e-22
 Identities = 45/101 (44%), Positives = 62/101 (60%), Gaps = 1/101 (0%)
 Frame = +3

Query: 204 QQYTIASGVKKLGEKNKAVVCHKENYPYAVFYCHKTDT-TKAYSVPLEGADGSRVKAIAV 262
           Q YTI   + ++    K V CH   YPYAVFYCH  ++  + Y V L G +G +V+A+ V
Sbjct: 3   QNYTILENIMRISAP-KMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKVEAMVV 179

Query: 263 CHTDTSEWNPKHLAFQVLKVQPGTVPVCHLLPEDHVVWIRK 303
           CH DTS W   H++FQ+L V PG+  VCH  P D+++W  K
Sbjct: 180 CHLDTSHWGSGHVSFQILGVTPGSSSVCHFFPADNLIWAPK 302


>AV780764 
          Length = 438

 Score = 93.6 bits (231), Expect = 4e-20
 Identities = 42/72 (58%), Positives = 50/72 (69%)
 Frame = -1

Query: 230 PYAVFYCHKTDTTKAYSVPLEGADGSRVKAIAVCHTDTSEWNPKHLAFQVLKVQPGTVPV 289
           PY VF+ H     +AY VPLEG DG RVK IAVCH  TS+W+P H A   LKV+PGT PV
Sbjct: 378 PYVVFWFH*LPKPQAYFVPLEGEDGVRVKTIAVCHQHTSKWDPNHAALPNLKVKPGTGPV 199

Query: 290 CHLLPEDHVVWI 301
           CH L E H++W+
Sbjct: 198 CHFLLEGHLLWL 163


>AV770881 
          Length = 403

 Score = 62.4 bits (150), Expect(3) = 1e-16
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = -3

Query: 254 GSRVKAIAVCHTDTSEWNPKHLAFQVLKVQPGTVPVCHLLPEDHVVWI 301
           G  +K + VCH DTS+W+P H AF  LKV+PGTVPV   LPE  ++W+
Sbjct: 311 GLGLKPLLVCHQDTSKWDPNHAAFPDLKVKPGTVPVSQFLPEGPLLWL 168



 Score = 29.6 bits (65), Expect(3) = 1e-16
 Identities = 13/17 (76%), Positives = 14/17 (81%)
 Frame = -2

Query: 245 YSVPLEGADGSRVKAIA 261
           Y VPLEG DG RVKA+A
Sbjct: 339 YFVPLEGEDGVRVKAVA 289



 Score = 29.6 bits (65), Expect(3) = 1e-16
 Identities = 11/21 (52%), Positives = 12/21 (56%)
 Frame = -1

Query: 224 CHKENYPYAVFYCHKTDTTKA 244
           CH   YPY VF+CH    T A
Sbjct: 403 CHPMAYPYGVFWCHGLPKTHA 341


>TC9286 similar to UP|O65009 (O65009) BURP domain containing protein,
           partial (6%)
          Length = 805

 Score = 78.2 bits (191), Expect = 2e-15
 Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
 Frame = +1

Query: 91  FFLEKDLHHGTKLNLQFSKTTSNAATFLPRQVANSIPFSSNKMEYIINKLNIKKGSKGVQ 150
           FF   DL+ G  + LQF       + FL R+  N IPFSS+++  ++   +I + S   +
Sbjct: 445 FFALDDLYAGNVMTLQFP--VQEISHFLSRKETNYIPFSSSQLPSVLQLFSIPEDSPKAK 618

Query: 151 IVKNTISECEEQGIKGEEKVCVTSLESMVDFTTSKLGKNVE----AVSTEVNKESNLQQY 206
            ++ T+ +CE + I GE K+C TSLESM++F  S +G N E      S      S LQ+Y
Sbjct: 619 SMRGTLGQCEGEPITGERKICATSLESMLEFVDSVIGSNTEGDLLTTSHPSPSGSPLQKY 798

Query: 207 TI 208
           TI
Sbjct: 799 TI 804


>TC13199 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing protein
           (Fragment), partial (19%)
          Length = 426

 Score = 74.7 bits (182), Expect = 2e-14
 Identities = 40/66 (60%), Positives = 47/66 (70%)
 Frame = +2

Query: 2   LPPQLYWKSMLPNSPMPKAITNLLHPAGYWSEEKGTWVDVGKGGVDVGVRKGYYEGGGTD 61
           L P+LYWKS LP +PMPKAIT+LLH    W+E+K T V VGKGGV+V    G  + GGT 
Sbjct: 119 LTPELYWKSKLPTTPMPKAITDLLH--SDWTEDKSTSVAVGKGGVNVDA--GKTKPGGTA 286

Query: 62  VNVGVG 67
           VNVG G
Sbjct: 287 VNVGKG 304


>BE122612 
          Length = 386

 Score = 72.0 bits (175), Expect = 1e-13
 Identities = 37/101 (36%), Positives = 57/101 (55%), Gaps = 1/101 (0%)
 Frame = +2

Query: 150 QIVKNTISECEEQGIKGEEKVCVTSLESMVDFTTSKLGKNVEAVSTE-VNKESNLQQYTI 208
           +++++++ ECE    +GE K CV S+E MVDF TS LG+NV   +TE VN  +       
Sbjct: 35  KMMRDSLQECERVPSRGETKRCVGSIEDMVDFATSVLGRNVVVRTTENVNGSNKKVMVGR 214

Query: 209 ASGVKKLGEKNKAVVCHKENYPYAVFYCHKTDTTKAYSVPL 249
             GV   G+  ++V CH+  +PY ++YCH     + Y   L
Sbjct: 215 VQGVNG-GKVTRSVSCHQSLFPYLLYYCHSLPKVRVYQADL 334


>BP042359 
          Length = 404

 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
 Frame = -3

Query: 229 YPYAVFYCHKTDTTKAYSVPLEGADGSRVK---AIAVCHTDTSEWNPKHLAFQVLKVQPG 285
           YPY ++YCH     + Y   +   D +++K    +A+CH DTS W P+H AF  L   PG
Sbjct: 402 YPYLLYYCHSVPQVRVYEAEILDVD-TKLKINHGVAICHLDTSAWGPEHGAFVALGAGPG 226

Query: 286 TVPVCHLLPEDHVVW 300
            + VCH + ++ + W
Sbjct: 225 KIEVCHWIFQNDMTW 181


>TC19611 
          Length = 533

 Score = 63.5 bits (153), Expect = 4e-11
 Identities = 36/90 (40%), Positives = 50/90 (55%)
 Frame = -3

Query: 71  FIYNYAASETQLHDKPNVALFFLEKDLHHGTKLNLQFSKTTSNAATFLPRQVANSIPFSS 130
           F   Y A ETQ         FF E  LH G K N+  +K  S    +LPR++A+ IPFS 
Sbjct: 258 FYAYYVAKETQSRS------FFEEYQLHAGNKFNVNLNKIKS-VVPWLPREIADHIPFSL 100

Query: 131 NKMEYIINKLNIKKGSKGVQIVKNTISECE 160
           +KM  I+  L++K  SK  ++V+ TI +CE
Sbjct: 99  DKMNEILEMLSVKLESKNAEMVEKTIGDCE 10



 Score = 33.1 bits (74), Expect = 0.060
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -2

Query: 2   LPPQLYWKSMLPNSPMPKAITNL 24
           LP +L WK  LP +P+PKAIT L
Sbjct: 445 LPAELDWKRKLPATPVPKAITEL 377


>TC12015 weakly similar to UP|O65009 (O65009) BURP domain containing
           protein, partial (12%)
          Length = 464

 Score = 60.5 bits (145), Expect = 3e-10
 Identities = 21/45 (46%), Positives = 30/45 (66%)
 Frame = +1

Query: 259 AIAVCHTDTSEWNPKHLAFQVLKVQPGTVPVCHLLPEDHVVWIRK 303
           A+ VCH DTS+W P H+ F+ L ++ G  PVCH  P  H++W+ K
Sbjct: 1   ALGVCHLDTSDWTPSHIIFKQLGIEAGKAPVCHFFPIKHLMWVAK 135


>AV769292 
          Length = 250

 Score = 50.8 bits (120), Expect = 3e-07
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = -3

Query: 269 EWNPKHLAFQVLKVQPGTVPVCHLLPE 295
           +WN KHLAFQVLKV+PGTV VCH LP+
Sbjct: 248 KWNLKHLAFQVLKVKPGTVSVCHFLPQ 168


>AV418436 
          Length = 280

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = -1

Query: 281 KVQPGTVPVCHLLPEDHVVWIRK 303
           KV+PGTV VCH LP+DHVVW+ K
Sbjct: 280 KVKPGTVSVCHFLPQDHVVWVPK 212


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.314    0.132    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,611,989
Number of Sequences: 28460
Number of extensions: 75267
Number of successful extensions: 379
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of query: 303
length of database: 4,897,600
effective HSP length: 90
effective length of query: 213
effective length of database: 2,336,200
effective search space: 497610600
effective search space used: 497610600
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)