Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148532.11 + phase: 0 
         (308 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC8082 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-...   220  3e-58
TC17232 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific ...   216  4e-57
TC10107 similar to UP|Q9MB24 (Q9MB24) S1-3 protein (Fragment), p...   178  1e-45
TC19645 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing pro...   150  4e-41
TC14280 weakly similar to UP|Q94IC5 (Q94IC5) BURP domain-contain...   145  8e-36
AV779646                                                              141  1e-34
BP045414                                                              114  2e-26
TC16074 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein...   108  9e-25
TC16694 similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein...    85  2e-21
TC17468 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific ...    97  3e-21
AV780764                                                               89  9e-19
TC9286 similar to UP|O65009 (O65009) BURP domain containing prot...    85  2e-17
BE122612                                                               72  9e-14
BP042359                                                               69  1e-12
AV770881                                                               59  2e-12
TC19611                                                                61  3e-10
TC12015 weakly similar to UP|O65009 (O65009) BURP domain contain...    59  1e-09
TC13199 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing pro...    50  4e-07
AV769292                                                               49  8e-07
AV418436                                                               46  7e-06

>TC8082 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-3, partial
            (54%)
          Length = 1913

 Score =  220 bits (560), Expect = 3e-58
 Identities = 108/216 (50%), Positives = 142/216 (65%)
 Frame = +1

Query: 93   FFLKKDLHHGTKLNLQFKETTSNNNGTKFLPREVANSIPFSSNKMENILNKFSIKEGSKE 152
            FF +  LH   K  +   +  S+      LPR++   IPFS +KM+ +L   S+K  SK 
Sbjct: 997  FFQEDQLHSDNKFYMHLNKIRSS---IPLLPRQITQQIPFSLDKMKEVLEMLSVKPNSKN 1167

Query: 153  AEIVKRTISECEANGIKGEEKLCVTSLESMVDFTISKLGNNVEAVSTEVDKNSNGLQQYV 212
            AEI+++TIS CEA  + GEEK C TSLESM+DF  SKLG NV A+ST+V K +  LQ  +
Sbjct: 1168 AEIMEKTISGCEAPAMDGEEKYCATSLESMMDFVTSKLGKNVHAMSTDVQKETK-LQNLL 1344

Query: 213  IAKGVKKLGEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPLEGVDGNMVKTIAVCHTDT 272
            +  GVKKL + +  I CH   YPY VF CH+   T  Y VPLEG DG  VK +AVCH DT
Sbjct: 1345 VKDGVKKLADDH-VIACHPLAYPYVVFGCHELQKTSAYFVPLEGEDGVRVKAVAVCHKDT 1521

Query: 273  SEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 308
            S+W+P ++AF VLKV+PGTVP+CH  P+ H++W+SK
Sbjct: 1522 SKWDPNYVAFRVLKVKPGTVPVCHFFPEGHLLWLSK 1629



 Score = 40.0 bits (92), Expect = 5e-04
 Identities = 15/24 (62%), Positives = 20/24 (82%)
 Frame = +1

Query: 2   LPPQLYWQSMLPNSPMPKAFTNLL 25
           LPP++YW+ MLP++PMPKA   LL
Sbjct: 97  LPPEIYWKMMLPSTPMPKAVIELL 168


>TC17232 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2,
           partial (33%)
          Length = 966

 Score =  216 bits (550), Expect = 4e-57
 Identities = 108/226 (47%), Positives = 146/226 (63%), Gaps = 1/226 (0%)
 Frame = +3

Query: 84  LDDKQNVTLFFLKKDLHHGTKLNLQFKETTSNNNGTKFLPREVANSIPFSSNKMENILNK 143
           L +K    +FF +++LH GTKL+LQ  +          LPR++A+ IPFS  K++ IL  
Sbjct: 108 LHEKTKAGVFFFEENLHPGTKLDLQLSK---RKPAVPILPRKIADQIPFSLEKLKEILEI 278

Query: 144 FSIKEGSKEAEIVKRTISECEANGIKGEEKLCVTSLESMVDFTISKLGNNVEAVSTEVDK 203
             +K  SK  EIV++T+  CE   ++GEE++C TSLES+VDF  SKLG NV A+STEV+ 
Sbjct: 279 LVVKPDSKNTEIVEKTMGGCELPSMEGEEQMCATSLESLVDFIASKLGKNVLAISTEVEL 458

Query: 204 NSNGLQQYVIAK-GVKKLGEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPLEGVDGNMV 262
                 Q ++ K GVKKL +     VCH   YPY V + HK   T  Y VPLEG DG  V
Sbjct: 459 EKETQSQNLLVKDGVKKLADDGMA-VCHPMTYPYPVCFSHKLVKTSAYFVPLEGEDGARV 635

Query: 263 KTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 308
           K +AVCH DTS+W+P H++F  L V+PGTVP+CH+LP+ H++WV K
Sbjct: 636 KAVAVCHRDTSKWDPNHVSFPDLNVKPGTVPVCHVLPERHLLWVPK 773


>TC10107 similar to UP|Q9MB24 (Q9MB24) S1-3 protein (Fragment), partial
           (65%)
          Length = 575

 Score =  178 bits (451), Expect = 1e-45
 Identities = 82/113 (72%), Positives = 94/113 (82%)
 Frame = +2

Query: 196 AVSTEVDKNSNGLQQYVIAKGVKKLGEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPLE 255
           AVST VDK +   Q+Y IA GVKKL   +K +VCHK+NYPYAVFYCHK+DST  YSVPLE
Sbjct: 2   AVSTVVDKETEK-QRYTIATGVKKLEAGDKAVVCHKQNYPYAVFYCHKSDSTRAYSVPLE 178

Query: 256 GVDGNMVKTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 308
           G +G  VK +AVCHTDTS+WNPKHLAF VLKV+PGTVP+CH LP+DHVVWVSK
Sbjct: 179 GDNGVRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVSK 337


>TC19645 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing protein
           (Fragment), partial (38%)
          Length = 619

 Score =  150 bits (379), Expect(2) = 4e-41
 Identities = 78/118 (66%), Positives = 95/118 (80%)
 Frame = +3

Query: 96  KKDLHHGTKLNLQFKETTSNNNGTKFLPREVANSIPFSSNKMENILNKFSIKEGSKEAEI 155
           K+     TKLNLQF +T+++   T FLPR+VA+SIPFSSNK++++LNKFS+K GS+EAEI
Sbjct: 99  KRTCIRXTKLNLQFTKTSNDAAATFFLPRQVADSIPFSSNKVDDVLNKFSLKPGSEEAEI 278

Query: 156 VKRTISECEANGIKGEEKLCVTSLESMVDFTISKLGNNVEAVSTEVDKNSNGLQQYVI 213
           VK TI+ECE  G+ GEEK CVTSLESMVDFT SKLG NVEAVST+V+K    LQQY I
Sbjct: 279 VKNTIAECEEPGVVGEEKRCVTSLESMVDFTTSKLGKNVEAVSTDVNKEKE-LQQYTI 449



 Score = 37.4 bits (85), Expect = 0.003
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +2

Query: 80  SQIQLDDKQNVTLFFLKKDLHHGTKLNL 107
           S+ QL +  NV LFFL+KDLH G K+ L
Sbjct: 50  SETQLHENPNVALFFLEKDLHQGNKIEL 133



 Score = 33.9 bits (76), Expect(2) = 4e-41
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 225 KTIVCHKENYPYAVFYCHK 243
           K ++ HKENYPYAVF C K
Sbjct: 482 KLLLFHKENYPYAVFXCXK 538


>TC14280 weakly similar to UP|Q94IC5 (Q94IC5) BURP domain-containing protein
           (Fragment), partial (54%)
          Length = 723

 Score =  145 bits (366), Expect = 8e-36
 Identities = 89/218 (40%), Positives = 121/218 (54%), Gaps = 42/218 (19%)
 Frame = +2

Query: 2   LPPQLYWQSMLPNSPMPKAFTNLLHPAGYWSKEKAR-----------------------D 38
           LPP+LYW+S+LP +PMPKA T++L+P  +W ++K+                        D
Sbjct: 83  LPPELYWKSVLPTTPMPKAITDILYP--HWVEDKSTNVGVRKGGVNVDAGKGKPGHTKVD 256

Query: 39  ASNGGLDVGVRKGYEGG--GTYLN-------------DEKIIPLIYFYPIPIPLN----E 79
              GG++V   KG  GG  GT +N               K  P+        P +     
Sbjct: 257 VGKGGVNVNAGKGSGGGHGGTNVNVGGGKGGGVSVHTGHKGKPVFVNVGSKSPFDYVYAA 436

Query: 80  SQIQLDDKQNVTLFFLKKDLHHGTKLNLQFKETTSNNNGTKFLPREVANSIPFSSNKMEN 139
           ++ QL    NV LFFL+K+LH GTK+NL F +T+   N   FLPR VA+SIPFSS K+E 
Sbjct: 437 TETQLHSDPNVALFFLEKNLHPGTKMNLHFTKTS---NKATFLPRIVADSIPFSSEKVEL 607

Query: 140 ILNKFSIKEGSKEAEIVKRTISECEANGIKGEEKLCVT 177
            LNK+S+K GS+EA+++K TI ECE  GI+GEEK C T
Sbjct: 608 ALNKYSVKAGSEEAQVMKNTIDECEQKGIQGEEKYCAT 721


>AV779646 
          Length = 510

 Score =  141 bits (356), Expect = 1e-34
 Identities = 69/123 (56%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
 Frame = -3

Query: 185 FTISKLGNNVEAVSTEVDKNSNGLQQYVIAK-GVKKLGEKNKTIVCHKENYPYAVFYCHK 243
           F  SKLGN+V A+STEV K +  L  Y++ K GV+KL +   T VCH   YPY VF+CHK
Sbjct: 508 FITSKLGNDVHAMSTEVTKETKLL--YLLVKDGVEKLADDYIT-VCHPMAYPYVVFWCHK 338

Query: 244 TDSTEVYSVPLEGVDGNMVKTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHV 303
              T+ Y VPLEG DG  VK +AVCH DTS+W+P H AF  LKV+PGTVP+CH LP+ H+
Sbjct: 337 LQKTDAYFVPLEGEDGVRVKAVAVCHKDTSKWDPNHAAFQDLKVKPGTVPVCHFLPEGHL 158

Query: 304 VWV 306
           +W+
Sbjct: 157 LWL 149


>BP045414 
          Length = 478

 Score =  114 bits (286), Expect = 2e-26
 Identities = 52/91 (57%), Positives = 64/91 (70%)
 Frame = -2

Query: 216 GVKKLGEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPLEGVDGNMVKTIAVCHTDTSEW 275
           GVKKL +     VCH   YPYAVF+CHK   T  Y VPLEG DG  V  +AVC  DTS+W
Sbjct: 471 GVKKLPDDG-IAVCHPLTYPYAVFFCHKLVKTSAYFVPLEGEDGARV*PVAVCPRDTSKW 295

Query: 276 NPKHLAFYVLKVQPGTVPICHILPQDHVVWV 306
           +P H++F  L VQPGTVP+CH+LP+ H++WV
Sbjct: 294 DPNHVSFPDLHVQPGTVPVCHVLPERHLLWV 202


>TC16074 similar to UP|Q8H9E8 (Q8H9E8) Resistant specific protein-3, partial
           (6%)
          Length = 844

 Score =  108 bits (271), Expect = 9e-25
 Identities = 65/158 (41%), Positives = 93/158 (58%), Gaps = 3/158 (1%)
 Frame = +2

Query: 92  LFFLKKDLHHGTKLNLQFKETTSNNNGTKFLPREVANSIPFSSNKMENILNKFSIKEGSK 151
           +FF+ KDL  G K+ + F    S+ +  KFLPRE AN IPFSS ++ ++LN FSI + S 
Sbjct: 374 VFFIPKDLKVGKKMPIYFSMKDSSTS-PKFLPREEANQIPFSSKQLPSLLNFFSIPKNSP 550

Query: 152 EAEIVKRTISECEANGIKGEEKLCVTSLESMVDFTISKLGNNVE---AVSTEVDKNSNGL 208
           +A+ +K T+ +CE   ++GE K C TSLES++D      G + +     +T + K+   L
Sbjct: 551 QAKAMKYTLEQCEFEPMEGETKFCATSLESLLDSARHLFGLSPQFKVLTTTHLTKSHVLL 730

Query: 209 QQYVIAKGVKKLGEKNKTIVCHKENYPYAVFYCHKTDS 246
           Q Y I + VK+    N  I CH   YP+AVFYCH   S
Sbjct: 731 QNYTILE-VKENRVPN-VIGCHPMPYPFAVFYCHSQQS 838


>TC16694 similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2, partial
           (12%)
          Length = 488

 Score = 85.1 bits (209), Expect(2) = 2e-21
 Identities = 35/57 (61%), Positives = 44/57 (76%)
 Frame = +1

Query: 250 YSVPLEGVDGNMVKTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWV 306
           Y VPLEG DG  V  +AVCH DTS+W+P H AF  LKV+PGTVP+CH LP+ H++W+
Sbjct: 106 YFVPLEGEDGVRVNHVAVCHQDTSKWDPNHAAFPDLKVKPGTVPVCHFLPEGHLLWL 276



 Score = 33.1 bits (74), Expect(2) = 2e-21
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 216 GVKKLGEKNKTIVCHKENYPYAVFYCH 242
           GV+KL +   T VCH   YPY VF+CH
Sbjct: 6   GVEKLADDYIT-VCHPMAYPYLVFWCH 83


>TC17468 weakly similar to UP|Q8H9E9 (Q8H9E9) Resistant specific protein-2,
           partial (11%)
          Length = 652

 Score = 97.1 bits (240), Expect = 3e-21
 Identities = 42/101 (41%), Positives = 60/101 (58%), Gaps = 1/101 (0%)
 Frame = +3

Query: 209 QQYVIAKGVKKLGEKNKTIVCHKENYPYAVFYCHKTDS-TEVYSVPLEGVDGNMVKTIAV 267
           Q Y I + + ++    K + CH   YPYAVFYCH  +S   VY V L G +G+ V+ + V
Sbjct: 3   QNYTILENIMRISAP-KMVACHTMPYPYAVFYCHSQESENRVYKVSLVGDNGDKVEAMVV 179

Query: 268 CHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 308
           CH DTS W   H++F +L V PG+  +CH  P D+++W  K
Sbjct: 180 CHLDTSHWGSGHVSFQILGVTPGSSSVCHFFPADNLIWAPK 302


>AV780764 
          Length = 438

 Score = 89.0 bits (219), Expect = 9e-19
 Identities = 39/72 (54%), Positives = 49/72 (67%)
 Frame = -1

Query: 235 PYAVFYCHKTDSTEVYSVPLEGVDGNMVKTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPI 294
           PY VF+ H     + Y VPLEG DG  VKTIAVCH  TS+W+P H A   LKV+PGT P+
Sbjct: 378 PYVVFWFH*LPKPQAYFVPLEGEDGVRVKTIAVCHQHTSKWDPNHAALPNLKVKPGTGPV 199

Query: 295 CHILPQDHVVWV 306
           CH L + H++W+
Sbjct: 198 CHFLLEGHLLWL 163


>TC9286 similar to UP|O65009 (O65009) BURP domain containing protein,
           partial (6%)
          Length = 805

 Score = 84.7 bits (208), Expect = 2e-17
 Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
 Frame = +1

Query: 91  TLFFLKKDLHHGTKLNLQFKETTSNNNGTKFLPREVANSIPFSSNKMENILNKFSIKEGS 150
           T FF   DL+ G  + LQF     ++    FL R+  N IPFSS+++ ++L  FSI E S
Sbjct: 439 TGFFALDDLYAGNVMTLQFPVQEISH----FLSRKETNYIPFSSSQLPSVLQLFSIPEDS 606

Query: 151 KEAEIVKRTISECEANGIKGEEKLCVTSLESMVDFTISKLGNNVEA---VSTEVDKNSNG 207
            +A+ ++ T+ +CE   I GE K+C TSLESM++F  S +G+N E     ++    + + 
Sbjct: 607 PKAKSMRGTLGQCEGEPITGERKICATSLESMLEFVDSVIGSNTEGDLLTTSHPSPSGSP 786

Query: 208 LQQYVI 213
           LQ+Y I
Sbjct: 787 LQKYTI 804


>BE122612 
          Length = 386

 Score = 72.4 bits (176), Expect = 9e-14
 Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
 Frame = +2

Query: 142 NKFSIKEGSKEAEIVKRTISECEANGIKGEEKLCVTSLESMVDFTISKLGNNVEAVSTEV 201
           N      GS E ++++ ++ ECE    +GE K CV S+E MVDF  S LG NV   +TE 
Sbjct: 2   NSARADNGSME-KMMRDSLQECERVPSRGETKRCVGSIEDMVDFATSVLGRNVVVRTTE- 175

Query: 202 DKNSNGLQQYVIAKGVKKL--GEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPL 254
             N NG  + V+   V+ +  G+  +++ CH+  +PY ++YCH      VY   L
Sbjct: 176 --NVNGSNKKVMVGRVQGVNGGKVTRSVSCHQSLFPYLLYYCHSLPKVRVYQADL 334


>BP042359 
          Length = 404

 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
 Frame = -3

Query: 234 YPYAVFYCHKTDSTEVYSVPLEGVDGNMVKT--IAVCHTDTSEWNPKHLAFYVLKVQPGT 291
           YPY ++YCH      VY   +  VD  +     +A+CH DTS W P+H AF  L   PG 
Sbjct: 402 YPYLLYYCHSVPQVRVYEAEILDVDTKLKINHGVAICHLDTSAWGPEHGAFVALGAGPGK 223

Query: 292 VPICHILPQDHVVWVS 307
           + +CH + Q+ + W +
Sbjct: 222 IEVCHWIFQNDMTWTT 175


>AV770881 
          Length = 403

 Score = 58.9 bits (141), Expect(2) = 2e-12
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = -3

Query: 262 VKTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWV 306
           +K + VCH DTS+W+P H AF  LKV+PGTVP+   LP+  ++W+
Sbjct: 302 LKPLLVCHQDTSKWDPNHAAFPDLKVKPGTVPVSQFLPEGPLLWL 168



 Score = 28.9 bits (63), Expect(2) = 2e-12
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 229 CHKENYPYAVFYCHKTDST 247
           CH   YPY VF+CH    T
Sbjct: 403 CHPMAYPYGVFWCHGLPKT 347


>TC19611 
          Length = 533

 Score = 60.8 bits (146), Expect = 3e-10
 Identities = 32/73 (43%), Positives = 45/73 (60%)
 Frame = -3

Query: 93  FFLKKDLHHGTKLNLQFKETTSNNNGTKFLPREVANSIPFSSNKMENILNKFSIKEGSKE 152
           FF +  LH G K N+   +  S      +LPRE+A+ IPFS +KM  IL   S+K  SK 
Sbjct: 216 FFEEYQLHAGNKFNVNLNKIKSV---VPWLPREIADHIPFSLDKMNEILEMLSVKLESKN 46

Query: 153 AEIVKRTISECEA 165
           AE+V++TI +CE+
Sbjct: 45  AEMVEKTIGDCES 7


>TC12015 weakly similar to UP|O65009 (O65009) BURP domain containing
           protein, partial (12%)
          Length = 464

 Score = 58.5 bits (140), Expect = 1e-09
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +1

Query: 265 IAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 308
           + VCH DTS+W P H+ F  L ++ G  P+CH  P  H++WV+K
Sbjct: 4   LGVCHLDTSDWTPSHIIFKQLGIEAGKAPVCHFFPIKHLMWVAK 135


>TC13199 similar to UP|Q94IC5 (Q94IC5) BURP domain-containing protein
           (Fragment), partial (19%)
          Length = 426

 Score = 50.4 bits (119), Expect = 4e-07
 Identities = 25/56 (44%), Positives = 36/56 (63%), Gaps = 2/56 (3%)
 Frame = +2

Query: 2   LPPQLYWQSMLPNSPMPKAFTNLLHPAGYWSKEKARDAS--NGGLDVGVRKGYEGG 55
           L P+LYW+S LP +PMPKA T+LLH    W+++K+   +   GG++V   K   GG
Sbjct: 119 LTPELYWKSKLPTTPMPKAITDLLH--SDWTEDKSTSVAVGKGGVNVDAGKTKPGG 280


>AV769292 
          Length = 250

 Score = 49.3 bits (116), Expect = 8e-07
 Identities = 20/27 (74%), Positives = 23/27 (85%)
 Frame = -3

Query: 274 EWNPKHLAFYVLKVQPGTVPICHILPQ 300
           +WN KHLAF VLKV+PGTV +CH LPQ
Sbjct: 248 KWNLKHLAFQVLKVKPGTVSVCHFLPQ 168


>AV418436 
          Length = 280

 Score = 46.2 bits (108), Expect = 7e-06
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -1

Query: 286 KVQPGTVPICHILPQDHVVWVSK 308
           KV+PGTV +CH LPQDHVVWV K
Sbjct: 280 KVKPGTVSVCHFLPQDHVVWVPK 212


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.315    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,720,927
Number of Sequences: 28460
Number of extensions: 77382
Number of successful extensions: 362
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of query: 308
length of database: 4,897,600
effective HSP length: 90
effective length of query: 218
effective length of database: 2,336,200
effective search space: 509291600
effective search space used: 509291600
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)


Medicago: description of AC148532.11