BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148484.9 + phase: 0
(502 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC17486 similar to UP|RU17_ARATH (Q42404) U1 small nuclear ribon... 318 1e-87
BP067368 163 7e-41
TC15172 107 5e-24
TC8296 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MSJ1... 80 8e-16
TC10249 similar to UP|Q84LL9 (Q84LL9) Salt tolerance protein 3, ... 69 2e-12
TC19998 similar to UP|RED_HUMAN (Q13123) Red protein (RER protei... 67 5e-12
TC9521 similar to UP|Q9FYA7 (Q9FYA7) Splicing factor RSZ33, part... 60 6e-10
TC14532 similar to UP|Q9FYA8 (Q9FYA8) SC35-like splicing factor ... 60 6e-10
AV419050 59 2e-09
AU088817 57 5e-09
BP067278 57 9e-09
TC9118 similar to UP|Q84JE4 (Q84JE4) Squamosa promoter binding l... 56 2e-08
BP066300 55 2e-08
BI419822 55 3e-08
BP047377 55 3e-08
TC15623 similar to UP|P93486 (P93486) Glycine-rich RNA-binding p... 54 5e-08
TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding p... 54 6e-08
TC8015 similar to UP|ROC4_NICSY (P19683) 31 kDa ribonucleoprotei... 54 6e-08
AV780303 53 1e-07
AU089119 52 2e-07
>TC17486 similar to UP|RU17_ARATH (Q42404) U1 small nuclear
ribonucleoprotein 70 kDa (U1 snRNP 70 kDa) (snRNP70)
(U1-70K), partial (39%)
Length = 595
Score = 318 bits (815), Expect = 1e-87
Identities = 154/168 (91%), Positives = 161/168 (95%)
Frame = +3
Query: 3 DPLLRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 62
DPLLRNQNAAVQAR KAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR
Sbjct: 90 DPLLRNQNAAVQARAKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 269
Query: 63 KCPPLTGMAQFVSKFAEPGEPEYSPPVPVVETPAERRARVHKLRLEKGAAKAAEELEKYD 122
KCPPL+GMAQFV KFAEPG+ EYSPP+PV ETPA+RR RVHKLRLEKGAAKAAEELEKYD
Sbjct: 270 KCPPLSGMAQFVGKFAEPGDAEYSPPIPVAETPAQRRERVHKLRLEKGAAKAAEELEKYD 449
Query: 123 PHNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDA 170
P NDPN+SGDPYKTLFVA+LSYETTESRIKREFESYG IKRVRLVTD+
Sbjct: 450 PQNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVTDS 593
>BP067368
Length = 322
Score = 163 bits (412), Expect = 7e-41
Identities = 86/113 (76%), Positives = 93/113 (82%), Gaps = 1/113 (0%)
Frame = -2
Query: 238 VNQRHSGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARD 297
VNQRHSGREQ +S PSRSEEPRVRE+R+ DRDREKSRER KD+D ERERSRERSSD+A
Sbjct: 321 VNQRHSGREQHKSAPSRSEEPRVREDRNVDRDREKSRERVKDKDGERERSRERSSDRA-- 148
Query: 298 RDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRD-RDRGRERDRDR 349
RDRDHREDRHHRDRDR RDRD RDRER+R RD D DRGRER+RDR
Sbjct: 147 RDRDHREDRHHRDRDRTRDRD----RDRERERDRDVTEIEDVTDRGRERERDR 1
Score = 51.2 bits (121), Expect = 4e-07
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = -2
Query: 305 DRHHRDRDRNRDRDRGKERDRER-DRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYR 363
++ H R++++ E R R DR DR+R + R+R +++D +RER ER DR R
Sbjct: 318 NQRHSGREQHKSAPSRSEEPRVREDRNVDRDREKSRERVKDKDGERERSRER--SSDRAR 145
Query: 364 EKDKDYEVGETDRGRSHDRGADYDHVESKHEKEPHGEIERDYE 406
++D + DR R+ DR D + + E +R E
Sbjct: 144 DRDHREDRHHRDRDRTRDRDRDRERERDRDVTEIEDVTDRGRE 16
Score = 41.6 bits (96), Expect = 3e-04
Identities = 29/102 (28%), Positives = 45/102 (43%), Gaps = 10/102 (9%)
Frame = -2
Query: 410 HHGRYKEPGHGHRHADPE--HDPDHYNHYEHQRGRGQYDEGDDRGDYNQYPDHAK----M 463
H GR + R +P D + E R R + +G+ + D A+
Sbjct: 309 HSGREQHKSAPSRSEEPRVREDRNVDRDREKSRERVKDKDGERERSRERSSDRARDRDHR 130
Query: 464 EDDHHTERAKSKSRDRDRNRDKDHDYHR----SERSHSREYD 501
ED HH +R +++ RDRDR R++D D ++R RE D
Sbjct: 129 EDRHHRDRDRTRDRDRDRERERDRDVTEIEDVTDRGRERERD 4
>TC15172
Length = 589
Score = 107 bits (267), Expect = 5e-24
Identities = 48/75 (64%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +3
Query: 429 DPDHYNHYEHQRGRGQYDEGDDRGD-YNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDH 487
DPDHY HY H RGQYD+GD+ GD YNQY D +MEDD+ TERAKS+SR+++R+RD D
Sbjct: 3 DPDHYGHYGHHLVRGQYDDGDEHGDHYNQYHDQDRMEDDYGTERAKSESREKERSRDVDR 182
Query: 488 DYHRSERSHSREYDY 502
+ R ERSHSRE+DY
Sbjct: 183 ENRRPERSHSREFDY 227
Score = 27.7 bits (60), Expect = 4.6
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = +3
Query: 235 GDEVNQRHSGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRER-ERSRERSSD 293
GD NQ H + + ER REK R R DR+ R ERS R D
Sbjct: 72 GDHYNQYHDQDRMEDDYGT---------ERAKSESREKERSRDVDRENRRPERSHSREFD 224
>TC8296 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MSJ1_4
{Arabidopsis thaliana;}, partial (55%)
Length = 1276
Score = 80.1 bits (196), Expect = 8e-16
Identities = 76/265 (28%), Positives = 108/265 (40%), Gaps = 10/265 (3%)
Frame = +2
Query: 127 PNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHT 186
P+I+ D Y +L V +++ TT + F+ YG + + + D + + RG+AF+ Y +
Sbjct: 113 PDIT-DTY-SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYA 286
Query: 187 RDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGR- 245
+ A + DGR ++GR + V + G + H GR
Sbjct: 287 DEASKAVDRLDGRMVDGREITVQFAK---------------------YGPNAERIHKGRI 403
Query: 246 ---EQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDH 302
E++ SRS PR RH D D SR+R R RSR RS DK DR
Sbjct: 404 IESEERAKQGSRSRSPR---RRHRD-DHRSSRDRD-----YRRRSRSRSYDKYERGDRHR 556
Query: 303 REDRHHRDRDRNRD-----RDRGKER-DRERDRGRDRERGRDRDRGRERDRDRERDHERD 356
DR +R R R+R + RG+ R D E R R R R R +R
Sbjct: 557 GRDRDYRRRSRSRSASLDYKGRGRGRYDDEPSRSRSRSVDSRSPARRSPSPRRSPSPKRS 736
Query: 357 VEHDRYREKDKDYEVGETDRGRSHD 381
V R K GE+ RS D
Sbjct: 737 VSPKRSTSPRKSPR-GESPDNRSRD 808
>TC10249 similar to UP|Q84LL9 (Q84LL9) Salt tolerance protein 3, partial
(35%)
Length = 1096
Score = 68.9 bits (167), Expect = 2e-12
Identities = 48/108 (44%), Positives = 62/108 (56%), Gaps = 11/108 (10%)
Frame = +1
Query: 255 SEEPRVREERHADRDREKSRERGKDRDRERERSRERSS---DKARDRDRDHREDRHHRDR 311
++E + EER A R+RE + ER K +++E ER R S +K RD+DRD R+R
Sbjct: 136 AKEKAIEEERLA-RERE-AEERRKRKEQEYERKRRGDSSDREKHRDKDRD-------RER 288
Query: 312 DRNRDRDRGKERDRERD--------RGRDRERGRDRDRGRERDRDRER 351
DR RDRD +ER RERD RG D G R+ GR+R RDR R
Sbjct: 289 DRYRDRDSDRERSRERDVRGYRDGGRGVDSRLGNRRNGGRDRYRDRSR 432
Score = 67.8 bits (164), Expect = 4e-12
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Frame = +1
Query: 246 EQQQSGPSRSEEPRVREERHADRDR-----EKSRERGKDRDRERERSRERSSDKARDRDR 300
E++ + +EE R R+E+ +R R ++ + R KDRDRER+R R+R SD+ R R+R
Sbjct: 157 EERLAREREAEERRKRKEQEYERKRRGDSSDREKHRDKDRDRERDRYRDRDSDRERSRER 336
Query: 301 DHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGR 337
D R +RD R D G R+ RDR RDR R R
Sbjct: 337 D---VRGYRDGGRGVDSRLGNRRNGGRDRYRDRSRSR 438
Score = 62.0 bits (149), Expect = 2e-10
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Frame = +1
Query: 278 KDRDRERERSRERSSDK---ARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRE 334
+D E + ++E++ ++ AR+R+ + R R ++ +R R RG DRE+ R +DR+
Sbjct: 109 RDFISEFQTAKEKAIEEERLAREREAEERRKRKEQEYERKR---RGDSSDREKHRDKDRD 279
Query: 335 RGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGETDRG---RSHDRGADYDHVES 391
R+RDR R+RD DRER ERDV R + D +G G R DR V++
Sbjct: 280 --RERDRYRDRDSDRERSRERDVRGYRDGGRGVDSRLGNRRNGGRDRYRDRSRSRSPVKN 453
Query: 392 KHEK 395
+ +
Sbjct: 454 SYRR 465
Score = 61.6 bits (148), Expect = 3e-10
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Frame = +1
Query: 268 RDREKSRERGKDRDRERER-SRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRE 326
RD + K++ E ER +RER +++ R R ++ +R R +R++ R K+RDRE
Sbjct: 109 RDFISEFQTAKEKAIEEERLAREREAEERRKR-KEQEYERKRRGDSSDREKHRDKDRDRE 285
Query: 327 RDRGRDRERGRDRDRGRERDRDRERDHERDVE----------HDRYREKDK 367
RDR RDR+ DR+R RERD RD R V+ DRYR++ +
Sbjct: 286 RDRYRDRD--SDRERSRERDVRGYRDGGRGVDSRLGNRRNGGRDRYRDRSR 432
Score = 34.7 bits (78), Expect = 0.037
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 6/124 (4%)
Frame = +1
Query: 177 GYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVE----RGRTVPNWRPRRLGGGLGTTR 232
G + Y RD + ++ A + IE R+ + E R R + +R G +
Sbjct: 79 GKQHVGYGMVRDFISEFQTAKEKAIEEERLAREREAEERRKRKEQEYERKRRGDSSDREK 258
Query: 233 VGGDEVNQRHSGREQQQSGPSRSEEPRVREERHADR--DREKSRERGKDRDRERERSRER 290
+ ++ + S RS E VR R R D R RDR R+RSR R
Sbjct: 259 HRDKDRDRERDRYRDRDSDRERSRERDVRGYRDGGRGVDSRLGNRRNGGRDRYRDRSRSR 438
Query: 291 SSDK 294
S K
Sbjct: 439 SPVK 450
Score = 33.5 bits (75), Expect = 0.083
Identities = 21/64 (32%), Positives = 27/64 (41%)
Frame = +1
Query: 437 EHQRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERSH 496
E ++ + Q E RGD D R K + R+RDR RD+D D RS
Sbjct: 190 ERRKRKEQEYERKRRGD----------SSDREKHRDKDRDRERDRYRDRDSDRERSRERD 339
Query: 497 SREY 500
R Y
Sbjct: 340 VRGY 351
>TC19998 similar to UP|RED_HUMAN (Q13123) Red protein (RER protein) (IK
factor) (Cytokine IK), partial (6%)
Length = 492
Score = 67.4 bits (163), Expect = 5e-12
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Frame = +1
Query: 285 ERSRERSSDKARDRDRDHRE------------DRHHRDRDRNRDRDRGKERDRERDRGRD 332
E + +R D+ D+ R H++ +R RDRDR+RDRDR +ERDRERDR RD
Sbjct: 223 ELALKRRQDQIADQRRRHQQILSDSNPPSADPNRRDRDRDRDRDRDRDRERDRERDRDRD 402
Query: 333 RERGRDRDRGRERDRDRERDHERDVEHDRYREKDK 367
RER R RER+RD E ++ E+++
Sbjct: 403 RER-----RNRERERDEENKARERARLEKLAERER 492
Score = 59.7 bits (143), Expect = 1e-09
Identities = 34/92 (36%), Positives = 49/92 (52%)
Frame = +1
Query: 287 SRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERD 346
++ + A R +D D+ R + D + RDR RDR+R RDRDR R+R+
Sbjct: 205 TKAEREELALKRRQDQIADQRRRHQQILSDSNPPSADPNRRDRDRDRDRDRDRDRERDRE 384
Query: 347 RDRERDHERDVEHDRYREKDKDYEVGETDRGR 378
RDR+RD ER R RE+++D E +R R
Sbjct: 385 RDRDRDRER-----RNRERERDEENKARERAR 465
Score = 56.6 bits (135), Expect = 9e-09
Identities = 30/86 (34%), Positives = 47/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 245 REQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHRE 304
R Q Q R ++ + + R+R +DRDR+R+R RER ++ RDRDR+ R
Sbjct: 238 RRQDQIADQRRRHQQILSDSNPPSADPNRRDRDRDRDRDRDRDRERDRERDRDRDRERRN 417
Query: 305 DRHHRDRDRNRDRDRGK-ERDRERDR 329
RD + N+ R+R + E+ ER+R
Sbjct: 418 RERERD-EENKARERARLEKLAERER 492
Score = 54.3 bits (129), Expect = 5e-08
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 280 RDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRER-DRGRDRER 335
RDR+R+R R+R D+ RDR+RD DR R+R+R RD + K R+R R ++ +RER
Sbjct: 325 RDRDRDRDRDRDRDRERDRERDRDRDRERRNRERERD-EENKARERARLEKLAERER 492
Score = 52.4 bits (124), Expect = 2e-07
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +1
Query: 261 REERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRG 320
R+++ AD+ R + ++ D + R D+ RDRDRD R+RDR RDRDR
Sbjct: 241 RQDQIADQ-RRRHQQILSDSNPPSADPNRRDRDRDRDRDRD-----RDRERDRERDRDRD 402
Query: 321 KERDRERDRGRDRERGRDRDRGR-ERDRDRER 351
+ER R R+R RD E + R+R R E+ +RER
Sbjct: 403 RER-RNRERERD-EENKARERARLEKLAERER 492
Score = 50.1 bits (118), Expect = 9e-07
Identities = 26/78 (33%), Positives = 44/78 (56%)
Frame = +1
Query: 236 DEVNQRHSGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKA 295
D++ + +Q S + R +R DRDR++ R+R +DR+R+R+R RER
Sbjct: 247 DQIADQRRRHQQILSDSNPPSADPNRRDRDRDRDRDRDRDRERDRERDRDRDRER----- 411
Query: 296 RDRDRDHREDRHHRDRDR 313
R+R+R+ E+ R+R R
Sbjct: 412 RNRERERDEENKARERAR 465
Score = 46.2 bits (108), Expect = 1e-05
Identities = 26/82 (31%), Positives = 42/82 (50%)
Frame = +1
Query: 303 REDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRY 362
+ +R R +D+ + R ++ D +R R+RDRDR+RD +RD E DR
Sbjct: 208 KAEREELALKRRQDQIADQRRRHQQILSDSNPPSADPNR-RDRDRDRDRDRDRDRERDRE 384
Query: 363 REKDKDYEVGETDRGRSHDRGA 384
R++D+D E +R R + A
Sbjct: 385 RDRDRDRERRNRERERDEENKA 450
Score = 34.7 bits (78), Expect = 0.037
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 459 DHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERSHSRE 499
D + + D +R + + R+RDR RD+D D R R R+
Sbjct: 313 DPNRRDRDRDRDRDRDRDRERDRERDRDRDRERRNRERERD 435
Score = 33.5 bits (75), Expect = 0.083
Identities = 13/42 (30%), Positives = 22/42 (51%)
Frame = +1
Query: 458 PDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERSHSRE 499
P+ + D +R + + RDR+R+RD+D + ER E
Sbjct: 316 PNRRDRDRDRDRDRDRDRERDRERDRDRDRERRNRERERDEE 441
Score = 33.1 bits (74), Expect = 0.11
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 460 HAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERSHSREYD 501
H ++ D + A RDRDR+RD+D D R ER R+ D
Sbjct: 274 HQQILSDSNPPSADPNRRDRDRDRDRDRDRDR-ERDRERDRD 396
Score = 31.2 bits (69), Expect = 0.41
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Frame = +1
Query: 442 RGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRD------KDHDYHRSERS 495
R Q D R + Q + R + + RDRDR+RD +D D R R+
Sbjct: 238 RRQDQIADQRRRHQQILSDSNPPSADPNRRDRDRDRDRDRDRDRERDRERDRDRDRERRN 417
Query: 496 HSREYD 501
RE D
Sbjct: 418 RERERD 435
Score = 27.3 bits (59), Expect = 6.0
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1
Query: 466 DHHTERAKSKSRDRDRNRDKD---HDYHRSERSHSRE 499
D +R + + R+RDR+RD++ + R E + +RE
Sbjct: 346 DRDRDRDRERDRERDRDRDRERRNRERERDEENKARE 456
>TC9521 similar to UP|Q9FYA7 (Q9FYA7) Splicing factor RSZ33, partial (56%)
Length = 598
Score = 60.5 bits (145), Expect = 6e-10
Identities = 54/194 (27%), Positives = 81/194 (40%), Gaps = 1/194 (0%)
Frame = +1
Query: 137 LFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQA 196
L+V RLS T ++R F YG ++ V + D YAF+E+ RD A
Sbjct: 97 LYVGRLSSRTRSRDLERVFSRYGRVRDVDMKRD--------YAFVEFSDPRDADDARYNL 252
Query: 197 DGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGREQQQSGPSRSE 256
DGR ++G R++V+ +G VP R R GGG GR++ + R
Sbjct: 253 DGRDVDGSRLIVEFAKG--VP--RGSREGGG----------------GRDRDREYMGRGP 372
Query: 257 EPRVREERHADRDREKSRE-RGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNR 315
P + D +R+ + D + R ER + ++ + RH R R+
Sbjct: 373 PPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKLSRHPRSDSRSP 552
Query: 316 DRDRGKERDRERDR 329
R R R R RDR
Sbjct: 553 VRSRSPRRGRSRDR 594
>TC14532 similar to UP|Q9FYA8 (Q9FYA8) SC35-like splicing factor SCL30a, 30a
kD, partial (71%)
Length = 1073
Score = 60.5 bits (145), Expect = 6e-10
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 7/199 (3%)
Frame = +3
Query: 136 TLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQ 195
+L V L ++ ++R F +G +K + L D + +PRG+ F++++ D A
Sbjct: 171 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGQPRGFGFVQFVDPADAADAKYH 350
Query: 196 ADGRKIEGRRV-LVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGREQQQSGPSR 254
DG+ + GR + +V E R P RH R + +S R
Sbjct: 351 MDGQILLGRELTVVFAEENRKKP--------------------TEMRHRERSRGRSYDRR 470
Query: 255 SEEPRV-REERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDR 313
PR R R++ + R R + RD + R S +R + +R + R R
Sbjct: 471 RSPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPPKRRDSRSVSPEERRYSRERSYTPRSR 650
Query: 314 NRDRDR-----GKERDRER 327
R R G R R R
Sbjct: 651 ERSYSRSPPYNGGSRSRSR 707
Score = 32.3 bits (72), Expect = 0.18
Identities = 29/116 (25%), Positives = 39/116 (33%), Gaps = 22/116 (18%)
Frame = +3
Query: 323 RDRERDRGRDRERGRD----------------RDRGRERDRD------RERDHERDVEHD 360
R RER RGR +R R R R R R RD + RD +
Sbjct: 429 RHRERSRGRSYDRRRSPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPPKRRDSRSVSPEE 608
Query: 361 RYREKDKDYEVGETDRGRSHDRGADYDHVESKHEKEPHGEIERDYEPDDHHGRYKE 416
R +++ Y R RS+ R Y+ + P P HG +E
Sbjct: 609 RRYSRERSYT--PRSRERSYSRSPPYNGGSRSRSRSPAKVAVHSRSPSPIHGDVRE 770
>AV419050
Length = 409
Score = 58.9 bits (141), Expect = 2e-09
Identities = 33/90 (36%), Positives = 44/90 (48%)
Frame = +1
Query: 278 KDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGR 337
+DRDR+RER RE+ DRDRD R R R R+R D G+ R +R R
Sbjct: 13 RDRDRDRERRREKEERDRGDRDRDRDRTRSKRSRSRSRSIDHGRSRHARSRSPSERSHRR 192
Query: 338 DRDRGRERDRDRERDHERDVEHDRYREKDK 367
R D+ R+R H RD D +++ K
Sbjct: 193 RHHRTPSPDQPRKR-HRRDSVEDDHKDTKK 279
Score = 55.8 bits (133), Expect = 2e-08
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Frame = +1
Query: 292 SDKARDRDRDHREDRHHRDR-DRNRDRDRGK-ERDRERDRGRDRERGRDRDRGRERDRDR 349
+D+ RDRDR+ R ++ RDR DR+RDRDR + +R R R R D R R +R
Sbjct: 7 TDRDRDRDRERRREKEERDRGDRDRDRDRTRSKRSRSRSRSIDHGRSRHARSRSPSERSH 186
Query: 350 ERDHERDVEHDRYREKDKDYEVGETDRGRSHDRGADYDHVESKHEKEPHGE 400
R H R D+ R++ + V E D + +D+ K +++ H E
Sbjct: 187 RRRHHRTPSPDQPRKRHRRDSV-EDDHKDTKKVVSDFVDGIVKEQQQKHKE 336
Score = 52.0 bits (123), Expect = 2e-07
Identities = 34/96 (35%), Positives = 48/96 (49%), Gaps = 4/96 (4%)
Frame = +1
Query: 263 ERHADRDREKSRERGK----DRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRD 318
+R DRDRE+ RE+ + DRDR+R+R+R + S ++R R DH RH R R +
Sbjct: 10 DRDRDRDRERRREKEERDRGDRDRDRDRTRSKRS-RSRSRSIDHGRSRHARSRSPS---- 174
Query: 319 RGKERDRERDRGRDRERGRDRDRGRERDRDRERDHE 354
+R R R D+ R R R E DH+
Sbjct: 175 -----ERSHRRRHHRTPSPDQPRKRHRRDSVEDDHK 267
Score = 41.6 bits (96), Expect = 3e-04
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 3/133 (2%)
Frame = +1
Query: 334 ERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGETDRGRS-HDRGADYDHVESK 392
+R RDRDR R R+++ +RD + DR R K D GRS H R E
Sbjct: 10 DRDRDRDRERRREKEERDRGDRDRDRDRTRSKRSRSRSRSIDHGRSRHARSRSPS--ERS 183
Query: 393 HEKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPEHDPDHY--NHYEHQRGRGQYDEGDD 450
H + H R PD R++ H D + + + Q+ + + + G
Sbjct: 184 HRRRHH----RTPSPDQPRKRHRRDSVEDDHKDTKKVVSDFVDGIVKEQQQKHKENGGGG 351
Query: 451 RGDYNQYPDHAKM 463
G+ D A+M
Sbjct: 352 EGEVEVNEDEAEM 390
>AU088817
Length = 191
Score = 57.4 bits (137), Expect = 5e-09
Identities = 25/43 (58%), Positives = 36/43 (83%)
Frame = +3
Query: 313 RNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHER 355
+ R+R+R +ER+RER+R R+RER R+R+R RER+R RER+ ER
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERER 131
Score = 57.0 bits (136), Expect = 7e-09
Identities = 25/41 (60%), Positives = 35/41 (84%)
Frame = +1
Query: 315 RDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHER 355
R+R+R +ER+RER+R R+RER R+R+R RER+R RER+ ER
Sbjct: 7 RERERERERERERERERERERERERERERERERXRERERER 129
Score = 57.0 bits (136), Expect = 7e-09
Identities = 24/43 (55%), Positives = 37/43 (85%)
Frame = +3
Query: 309 RDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRER 351
++R+R R+R+R +ER+RER+R R+RER R+R+R R R+R+RER
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERER 131
Score = 56.2 bits (134), Expect = 1e-08
Identities = 24/42 (57%), Positives = 36/42 (85%)
Frame = +3
Query: 311 RDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERD 352
++R R+R+R +ER+RER+R R+RER R+R+R RER R+RER+
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERE 128
Score = 55.8 bits (133), Expect = 2e-08
Identities = 24/41 (58%), Positives = 35/41 (84%)
Frame = +1
Query: 311 RDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRER 351
R+R R+R+R +ER+RER+R R+RER R+R+R R R+R+RER
Sbjct: 7 RERERERERERERERERERERERERERERERERXRERERER 129
Score = 55.5 bits (132), Expect = 2e-08
Identities = 25/43 (58%), Positives = 35/43 (81%)
Frame = +3
Query: 321 KERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYR 363
+ER+RER+R R+RER R+R+R RER+R+RER+ ER E +R R
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERER 131
Score = 55.1 bits (131), Expect = 3e-08
Identities = 23/42 (54%), Positives = 36/42 (84%)
Frame = +3
Query: 315 RDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERD 356
++R+R +ER+RER+R R+RER R+R+R RER+R+R R+ ER+
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERE 128
Score = 55.1 bits (131), Expect = 3e-08
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = +1
Query: 306 RHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDR 347
R R+R+R R+R+R +ER+RER+R R+RER R+R R RER+R
Sbjct: 4 RRERERERERERERERERERERERERERERERERXRERERER 129
Score = 54.7 bits (130), Expect = 3e-08
Identities = 23/41 (56%), Positives = 35/41 (85%)
Frame = +2
Query: 316 DRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERD 356
+R+R +ER+RER+R R+RER R+R+R RER+R+ ER+ ER+
Sbjct: 8 EREREREREREREREREREREREREREREREREXERERERE 130
Score = 54.7 bits (130), Expect = 3e-08
Identities = 23/41 (56%), Positives = 35/41 (85%)
Frame = +2
Query: 312 DRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERD 352
+R R+R+R +ER+RER+R R+RER R+R+R RE +R+RER+
Sbjct: 8 EREREREREREREREREREREREREREREREREXERERERE 130
Score = 54.3 bits (129), Expect = 5e-08
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +3
Query: 317 RDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVE 358
++R +ER+RER+R R+RER R+R+R RER+R+RER ER+ E
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERE 128
Score = 53.9 bits (128), Expect = 6e-08
Identities = 23/45 (51%), Positives = 36/45 (79%)
Frame = +3
Query: 325 RERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDY 369
+ER+R R+RER R+R+R RER+R+RER+ ER+ E R RE+++ +
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERERXF 137
Score = 53.5 bits (127), Expect = 8e-08
Identities = 24/44 (54%), Positives = 34/44 (76%)
Frame = +1
Query: 319 RGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRY 362
R +ER+RER+R R+RER R+R+R RER+R+RER ER+ E +
Sbjct: 7 RERERERERERERERERERERERERERERERERXRERERERXSF 138
Score = 53.1 bits (126), Expect = 1e-07
Identities = 23/43 (53%), Positives = 35/43 (80%)
Frame = +3
Query: 323 RDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREK 365
++RER+R R+RER R+R+R RER+R+RER+ ER+ +R RE+
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERER 131
Score = 52.8 bits (125), Expect = 1e-07
Identities = 23/41 (56%), Positives = 34/41 (82%)
Frame = +2
Query: 318 DRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVE 358
+R +ER+RER+R R+RER R+R+R RER+R+RE + ER+ E
Sbjct: 8 EREREREREREREREREREREREREREREREREXERERERE 130
Score = 52.0 bits (123), Expect = 2e-07
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +3
Query: 303 REDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRER 345
+E R+R+R R+R+R +ER+RER+R R+RER R R+R RER
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERER 131
Score = 52.0 bits (123), Expect = 2e-07
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = +1
Query: 325 RERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREK 365
RER+R R+RER R+R+R RER+R+RER+ ER+ +R RE+
Sbjct: 7 RERERERERERERERERERERERERERERERERXRERERER 129
Score = 50.8 bits (120), Expect = 5e-07
Identities = 22/41 (53%), Positives = 33/41 (79%)
Frame = +1
Query: 327 RDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDK 367
R+R R+RER R+R+R RER+R+RER+ ER+ E R RE+++
Sbjct: 7 RERERERERERERERERERERERERERERERERXRERERER 129
Score = 50.1 bits (118), Expect = 9e-07
Identities = 20/39 (51%), Positives = 31/39 (79%)
Frame = +3
Query: 263 ERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRD 301
ER +R+RE+ RER ++R+RERER RER ++ R+R+R+
Sbjct: 12 ERERERERERERERERERERERERERERERERXRERERE 128
Score = 49.7 bits (117), Expect = 1e-06
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 268 RDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRER 327
++RE+ RER ++R+RERER RER R+R+R R+R+R +ER+RER
Sbjct: 3 QERERERERERERERERERERER-----------------ERERERERERERXRERERER 131
Score = 49.3 bits (116), Expect = 1e-06
Identities = 20/40 (50%), Positives = 31/40 (77%)
Frame = +3
Query: 262 EERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRD 301
+ER +R+RE+ RER ++R+RERER RER ++ R R+R+
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERE 122
Score = 48.5 bits (114), Expect = 2e-06
Identities = 25/60 (41%), Positives = 36/60 (59%)
Frame = +1
Query: 268 RDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRER 327
R+RE+ RER ++R+RERER RE R+R+R R+R+R +ER+RER
Sbjct: 7 RERERERERERERERERERERE-------------------RERERERERERXRERERER 129
Score = 48.5 bits (114), Expect = 2e-06
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +2
Query: 263 ERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRD 301
ER +R+RE+ RER ++R+RERER RER + R+R+R+
Sbjct: 14 EREREREREREREREREREREREREREREREXERERERE 130
Score = 48.5 bits (114), Expect = 2e-06
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +1
Query: 300 RDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDR 341
R RE R+R+R R+R+R +ER+RER+R R+R R R+R+R
Sbjct: 4 RRERERERERERERERERERERERERERERERERXRERERER 129
Score = 48.5 bits (114), Expect = 2e-06
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +1
Query: 259 RVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDR 300
R ER +R+RE+ RER ++R+RERER RER + R+R+R
Sbjct: 4 RRERERERERERERERERERERERERERERERERXRERERER 129
Score = 47.8 bits (112), Expect = 4e-06
Identities = 20/40 (50%), Positives = 32/40 (80%)
Frame = +2
Query: 331 RDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYE 370
R+RER R+R+R RER+R+RER+ ER+ E +R E++++ E
Sbjct: 11 REREREREREREREREREREREREREREREREXERERERE 130
Score = 47.8 bits (112), Expect = 4e-06
Identities = 20/40 (50%), Positives = 32/40 (80%)
Frame = +1
Query: 331 RDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYE 370
R+RER R+R+R RER+R+RER+ ER+ E +R R ++++ E
Sbjct: 7 RERERERERERERERERERERERERERERERERXRERERE 126
Score = 47.4 bits (111), Expect = 6e-06
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 263 ERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRD 301
ER +R+RE+ RER ++R+RERER RER ++ +R+R+
Sbjct: 8 EREREREREREREREREREREREREREREREREXERERE 124
Score = 47.4 bits (111), Expect = 6e-06
Identities = 20/40 (50%), Positives = 32/40 (80%)
Frame = +3
Query: 331 RDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYE 370
++RER R+R+R RER+R+RER+ ER+ E +R RE+ ++ E
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERE 122
Score = 47.4 bits (111), Expect = 6e-06
Identities = 26/58 (44%), Positives = 34/58 (57%)
Frame = +1
Query: 282 RERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDR 339
RERER RER R+R+R R+R+R +ER+RER+R R RER R+R
Sbjct: 7 RERERERERE-----------------RERERERERERERERERERERERXRERERER 129
Score = 47.0 bits (110), Expect = 7e-06
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = +3
Query: 257 EPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDR 298
+ R RE ER +R+RE+ RER ++R+RERER RER ++ R+R
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERER 131
Score = 44.7 bits (104), Expect = 4e-05
Identities = 17/39 (43%), Positives = 29/39 (73%)
Frame = +2
Query: 267 DRDREKSRERGKDRDRERERSRERSSDKARDRDRDHRED 305
+R+RE+ RER ++R+RERER RER ++ R+ +R+ +
Sbjct: 14 EREREREREREREREREREREREREREREREXERERERE 130
Score = 43.5 bits (101), Expect = 8e-05
Identities = 22/49 (44%), Positives = 29/49 (58%), Gaps = 1/49 (2%)
Frame = +2
Query: 252 PSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDRD 299
P E R RE ER +R+RE+ RER ++R+RERE RER + D
Sbjct: 2 PGEREREREREREREREREREREREREREREREREXEREREREXVLSLD 148
Score = 41.6 bits (96), Expect = 3e-04
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +1
Query: 253 SRSEEPRVRE---ERHADRDREKSRERGKDRDRERERSRER 290
+R E R RE ER +R+RE+ RER ++R+RER R RER
Sbjct: 1 TRRERERERERERERERERERERERERERERERERXRERER 123
Score = 41.2 bits (95), Expect = 4e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +3
Query: 248 QQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRER 290
Q+ R E ER +R+RE+ RER ++R+R RER RER
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERER 131
Score = 38.9 bits (89), Expect = 0.002
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 247 QQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSR 288
Q++ E R RE ER +R+RE+ RER ++R RERER R
Sbjct: 3 QERERERERERERERERERERERERERERERERERXRERERER 131
Score = 37.7 bits (86), Expect = 0.004
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 245 REQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERER 286
R +++ R E ER +R+RE+ RER + R+RERER
Sbjct: 4 RRERERERERERERERERERERERERERERERERXRERERER 129
Score = 36.2 bits (82), Expect = 0.013
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 244 GREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERE 285
G +++ R E ER +R+RE+ RER +R+RERE
Sbjct: 5 GEREREREREREREREREREREREREREREREREXERERERE 130
>BP067278
Length = 562
Score = 56.6 bits (135), Expect = 9e-09
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Frame = +1
Query: 236 DEVNQRHSGR------EQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRE 289
DE RH R E + + P + EE R+R+ RH D+ +SR + RD+ R E
Sbjct: 127 DESGSRHKKRSRSKSVEDKHNFPEKLEENRIRKSRHNDKRHSRSRST-ESRDQTDAREDE 303
Query: 290 RSSDKARDRDRDHREDRHHRDRDRNRDRD-RGKERDRERDRGRDRERGRDRDRGRERDRD 348
R K++ HRD R R + GK R +++ ++ + RDR R R
Sbjct: 304 RKYGKSK-----------HRDSKRTRSKSVEGKHRSKDKSGEVKDKKSKHRDRRRSRSVS 450
Query: 349 RERDHERDVEHDRYREKDKDYEVGETDRGR 378
E DH+ R + ++E GR
Sbjct: 451 LEGDHDIGGTSSRKNLDESNFERRRLRSGR 540
Score = 46.2 bits (108), Expect = 1e-05
Identities = 43/161 (26%), Positives = 71/161 (43%), Gaps = 25/161 (15%)
Frame = +1
Query: 253 SRSEEPRVREERHADRDREKSR-----ERGKDRDRERERSRERSSDKARDRDRDHR-EDR 306
S +++ + +E+ R+R++SR E+ + R R R + S + + R R ED+
Sbjct: 4 SFNKDEEILQEKSKHRERKRSRSVSVDEKPQRRSRSSPRKVDESGSRHKKRSRSKSVEDK 183
Query: 307 HH-------------RDRDRNRDRDRGKE-RDRERDRGRDRERGRDRDRGRERDRDRERD 352
H+ R D+ R R E RD+ R +R+ G+ + RD +R
Sbjct: 184 HNFPEKLEENRIRKSRHNDKRHSRSRSTESRDQTDAREDERKYGK------SKHRDSKRT 345
Query: 353 HERDVEHDRYREKDKDYEVGE-----TDRGRSHDRGADYDH 388
+ VE ++R KDK EV + DR RS + DH
Sbjct: 346 RSKSVE-GKHRSKDKSGEVKDKKSKHRDRRRSRSVSLEGDH 465
Score = 41.6 bits (96), Expect = 3e-04
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 13/165 (7%)
Frame = +1
Query: 337 RDRDRGRERDRDRERDHERDVEHD---RYREKDKDYEVGETDRGRSHDRGADYDHVESKH 393
+D + +E+ + RER R V D + R + +V E+ G H + + VE KH
Sbjct: 13 KDEEILQEKSKHRERKRSRSVSVDEKPQRRSRSSPRKVDES--GSRHKKRSRSKSVEDKH 186
Query: 394 ---EKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPEHDPDHYN---HYEHQRGRGQYDE 447
EK I + D H R + D D Y H + +R R + E
Sbjct: 187 NFPEKLEENRIRKSRHNDKRHSRSRST-ESRDQTDAREDERKYGKSKHRDSKRTRSKSVE 363
Query: 448 GDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNR----DKDHD 488
G H + + KSK RDR R+R + DHD
Sbjct: 364 GK----------HRSKDKSGEVKDKKSKHRDRRRSRSVSLEGDHD 468
>TC9118 similar to UP|Q84JE4 (Q84JE4) Squamosa promoter binding
like-protein, partial (16%)
Length = 779
Score = 55.8 bits (133), Expect = 2e-08
Identities = 47/177 (26%), Positives = 75/177 (41%), Gaps = 2/177 (1%)
Frame = +2
Query: 253 SRSEEPRVREERHADRDREKSRERGKDRDRERERSRE-RSSDKARDRDRDHREDRHHRDR 311
SR EE EE + + E+ RE +D R R++ R RSS +RDRDRD
Sbjct: 8 SRHEE----EEEEEEEEEEEKREDVRDHKRSRKKHRSHRSSHTSRDRDRD---------- 145
Query: 312 DRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEV 371
G++ R +D+ R G D +H+ H +Y + D +
Sbjct: 146 --------GRKHKRRHSSSKDKYSYRGAKHGISDD-----EHQHSSHHHKY-DSSSDEKH 283
Query: 372 GETDRGRSHDRGADYDHVES-KHEKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPE 427
+ R + D +D++H S +H+ E E ER + H ++K H R ++ E
Sbjct: 284 RSSRRRQREDSMSDHEHKHSRRHKHETSSEDERRHR--SRHTKHKSRSHVERESELE 448
Score = 53.5 bits (127), Expect = 8e-08
Identities = 42/184 (22%), Positives = 64/184 (33%), Gaps = 1/184 (0%)
Frame = +2
Query: 317 RDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGETDR 376
R +E + E + RE RD R R++ R H R++D+D
Sbjct: 11 RHEEEEEEEEEEEEEKREDVRDHKRSRKKHRSHRSSHTS-------RDRDRD-------- 145
Query: 377 GRSHDRGADYDHVESKHEKEPHGEIERDYEPDDHHGRYKEPG-HGHRHADPEHDPDHYNH 435
GR H R + + HG + +++ HH +Y HR + D +
Sbjct: 146 GRKHKRRHSSSKDKYSYRGAKHGISDDEHQHSSHHHKYDSSSDEKHRSSRRRQREDSMSD 325
Query: 436 YEHQRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERS 495
+EH+ R E + H K + H ER DK ER+
Sbjct: 326 HEHKHSRRHKHETSSEDERRHRSRHTKHKSRSHVERESELEEGEVMKSDKSQQASEVERA 505
Query: 496 HSRE 499
SRE
Sbjct: 506 -SRE 514
Score = 51.6 bits (122), Expect = 3e-07
Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 17/178 (9%)
Frame = +2
Query: 241 RHSGREQQQSGPSRSEEPRVREERHADRDREKSRE-------RGKDRD-RERERSRERSS 292
R S E+++ EE + + R R R+K R R +DRD R+ +R S
Sbjct: 2 RSSRHEEEEEEEEEEEEEKREDVRDHKRSRKKHRSHRSSHTSRDRDRDGRKHKRRHSSSK 181
Query: 293 DKARDR-------DRDHREDRHHRDRDRNRDRDRGKERDRER-DRGRDRERGRDRDRGRE 344
DK R D +H+ HH D + D R R+R D D E R E
Sbjct: 182 DKYSYRGAKHGISDDEHQHSSHHHKYDSSSDEKHRSSRRRQREDSMSDHEHKHSRRHKHE 361
Query: 345 RDRDRERDH-ERDVEHDRYREKDKDYEVGETDRGRSHDRGADYDHVESKHEKEPHGEI 401
+ ER H R +H +++ E+ E + +S D+ VE + +EP +
Sbjct: 362 TSSEDERRHRSRHTKHKSRSHVERESELEEGEVMKS-DKSQQASEVE-RASREPSASL 529
Score = 32.3 bits (72), Expect = 0.18
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 434 NHYEHQRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSE 493
+ +E + + +E + R D DH + H + R+ SRDRDR+ K H S
Sbjct: 8 SRHEEEEEEEEEEEEEKREDVR---DHKRSRKKHRSHRSSHTSRDRDRDGRKHKRRHSSS 178
Query: 494 RSHSREYDY 502
+ +Y Y
Sbjct: 179 KD---KYSY 196
>BP066300
Length = 420
Score = 55.5 bits (132), Expect = 2e-08
Identities = 25/74 (33%), Positives = 46/74 (61%)
Frame = -3
Query: 142 LSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQADGRKI 201
LS+ TTE ++ F+++G + V LV D +N+PRG+AF+ Y + + A + G+ +
Sbjct: 412 LSFRTTEESLRNCFKNFGQLVDVXLVMDKLANRPRGFAFLRYATEEESQKAIEGMHGKFL 233
Query: 202 EGRRVLVDVERGRT 215
+GR + V+V + R+
Sbjct: 232 DGRVIFVEVAKPRS 191
>BI419822
Length = 380
Score = 55.1 bits (131), Expect = 3e-08
Identities = 28/98 (28%), Positives = 50/98 (50%)
Frame = +2
Query: 138 FVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQAD 197
FV L++ T +++ F YG I +++ D E+ + RG+ F+ + + MK A + +
Sbjct: 86 FVGGLAWATDNEALEKAFSPYGEIVESKVINDRETGRSRGFGFVTFASEQAMKDAIEAMN 265
Query: 198 GRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 235
G+ ++GR + V+ + R R GGG G GG
Sbjct: 266 GQNLDGRNITVNEAQSRGSSGGGGRYGGGGGGYGGGGG 379
>BP047377
Length = 564
Score = 54.7 bits (130), Expect = 3e-08
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = +3
Query: 130 SGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDM 189
S ++ +FV + Y+ TE ++ + G + RLV D E+ KP+GY F EY
Sbjct: 114 SQSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 293
Query: 190 KAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLG-GGLGTT 231
+A + G +I GR++ VD N R R G GG G T
Sbjct: 294 LSARRNLQGYEINGRQLRVDFAE-NDKGNDRNREQGRGGPGMT 419
>TC15623 similar to UP|P93486 (P93486) Glycine-rich RNA-binding protein
PsGRBP, partial (88%)
Length = 683
Score = 54.3 bits (129), Expect = 5e-08
Identities = 30/108 (27%), Positives = 49/108 (44%)
Frame = +1
Query: 137 LFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQA 196
LF+ LSY + ++ F S+G + R++ D ++ + RG+ F+ + +A
Sbjct: 190 LFIGGLSYGVDDKSLEDAFSSFGTVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSM 369
Query: 197 DGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSG 244
DG+ + GR + V R R GGG GT G R+SG
Sbjct: 370 DGQDLNGRNIRVSYANDRPA----GPRGGGGYGT----GGGYGDRNSG 489
>TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding protein 2,
partial (93%)
Length = 725
Score = 53.9 bits (128), Expect = 6e-08
Identities = 27/92 (29%), Positives = 49/92 (52%)
Frame = +1
Query: 138 FVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQAD 197
FV L++ T +++ F SYG I ++V D E+ + RG+ F+ + M++A + +
Sbjct: 91 FVGGLAWTTDSHTLEQAFSSYGEIIDSKVVNDRETGRSRGFGFVTFTSEEAMRSAIEGMN 270
Query: 198 GRKIEGRRVLVDVERGRTVPNWRPRRLGGGLG 229
G +++GR + V+ + R R GGG G
Sbjct: 271 GNELDGRNITVNEAQARGGGGGGGGRGGGGYG 366
Score = 26.9 bits (58), Expect = 7.8
Identities = 12/26 (46%), Positives = 13/26 (49%)
Frame = -2
Query: 410 HHGRYKEPGHGHRHADPEHDPDHYNH 435
HH R H H H HD DH+NH
Sbjct: 535 HHRRCHSGSHHHHHHIHLHD-DHHNH 461
>TC8015 similar to UP|ROC4_NICSY (P19683) 31 kDa ribonucleoprotein,
chloroplast precursor, partial (28%)
Length = 717
Score = 53.9 bits (128), Expect = 6e-08
Identities = 24/86 (27%), Positives = 45/86 (51%)
Frame = +3
Query: 130 SGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDM 189
S D +++V L + +R++ F +G ++ R+V D E+ + RG+ F+ D+
Sbjct: 63 SRDSGLSVYVGNLPWSVDTARLEEIFREHGNVENARIVMDRETGRSRGFGFVTMSSEADI 242
Query: 190 KAAYKQADGRKIEGRRVLVDVERGRT 215
A DG+ ++GR + V V GR+
Sbjct: 243 NGAIAALDGQSLDGRTIRVSVAEGRS 320
>AV780303
Length = 562
Score = 52.8 bits (125), Expect = 1e-07
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Frame = +3
Query: 279 DRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGR------- 331
DRDR+ RS RDRD +R RDRDR+R R++ KERDRE G
Sbjct: 3 DRDRDSVRSSRDRDGGRSSRDRDRDGERSSRDRDRDRGREKEKERDRETRYGTRRAQVTH 182
Query: 332 ---------DRERGRDRDRGRERDRDRERDHERD 356
D E R +D GR D+ + R+
Sbjct: 183 EKDDVIGRWDDETERKQDEGRHGDKSGRENGRRE 284
Score = 46.6 bits (109), Expect = 9e-06
Identities = 47/137 (34%), Positives = 62/137 (44%), Gaps = 21/137 (15%)
Frame = +3
Query: 316 DRDRGKERD-RERDRGRDRERGRDRDRGRE-RDRDRERDHERDVEHDRYRE--------- 364
DRDR R R+RD GR R RDRD R RDRDR+R E++ E DR
Sbjct: 3 DRDRDSVRSSRDRDGGRS-SRDRDRDGERSSRDRDRDRGREKEKERDRETRYGTRRAQVT 179
Query: 365 KDKDYEVG----ETDRGRSHDRGADYDHVES-KHEKEPHGE--IERDYEPDDHHGRYKEP 417
+KD +G ET+R + R D E+ + E P G I + E + + P
Sbjct: 180 HEKDDVIGRWDDETERKQDEGRHGDKSGRENGRRESGPGGAGVILCEIEKPNAISNLEMP 359
Query: 418 GH---GHRHADPEHDPD 431
G A+PE DP+
Sbjct: 360 GDLGIKKHAAEPEADPE 410
Score = 42.7 bits (99), Expect = 1e-04
Identities = 35/104 (33%), Positives = 51/104 (48%)
Frame = +2
Query: 275 ERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRE 334
+R + R + E ER DK RD + R+ RDR+ G+ RDRE+ GR
Sbjct: 92 QRQR*RQGQGEGEGERQGDKIRDAESTGDT------REG*RDREMGR-RDREK-TGRGTT 247
Query: 335 RGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGETDRGR 378
R ++R+R RE +RER R RE ++D+E + R R
Sbjct: 248 RRQERERERE---ERERSRRSRSHSVRDRETERDFESRDARRFR 370
Score = 42.0 bits (97), Expect = 2e-04
Identities = 31/97 (31%), Positives = 43/97 (43%)
Frame = +2
Query: 223 RLGGGLGTTRVGGDEVNQRHSGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDR 282
R G G G GD++ S + ++ R R RE+ R + RER ++
Sbjct: 107 RQGQGEGEGERQGDKIRDAESTGDTREG*RDREMGRRDREKTGRGTTRRQERERERE--- 277
Query: 283 ERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDR 319
ERERSR S RDR+ +R RD R RD+
Sbjct: 278 ERERSRRSRSHSVRDRE----TERDFESRDARRFRDK 376
Score = 41.6 bits (96), Expect = 3e-04
Identities = 29/93 (31%), Positives = 41/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 241 RHSGREQQQSGPSRSEEPRVR--EERHADRDREKSRERGKDRDRE-RERSRERSSDKARD 297
R S R + RS R R E DRDR++ RE+ K+RDRE R +R +D
Sbjct: 12 RDSVRSSRDRDGGRSSRDRDRDGERSSRDRDRDRGREKEKERDRETRYGTRRAQVTHEKD 191
Query: 298 RDRDHREDRHHRDRDRNRDRDRGKERDRERDRG 330
+D R +D R D+ + R+ G
Sbjct: 192 DVIGRWDDETERKQDEGRHGDKSGRENGRRESG 290
Score = 40.8 bits (94), Expect = 5e-04
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 259 RVREERHADRDREKSRERG-KDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDR 317
R R+ + RDR++ ER +DRDR+R R +E+ D+ + H +D R
Sbjct: 33 RDRDGGRSSRDRDRDGERSSRDRDRDRGREKEKERDRETRYGTRRAQVTHEKDDVIGRWD 212
Query: 318 DRGKERDRERDRGRDRER-GRDRDR 341
D E +R++D GR ++ GR+ R
Sbjct: 213 D---ETERKQDEGRHGDKSGRENGR 278
>AU089119
Length = 113
Score = 52.4 bits (124), Expect = 2e-07
Identities = 22/36 (61%), Positives = 32/36 (88%)
Frame = +2
Query: 321 KERDRERDRGRDRERGRDRDRGRERDRDRERDHERD 356
+ER+RER+R R+RER R+R+R RER+R+RER+ ER+
Sbjct: 5 RERERERERERERERERERERERERERERERERERE 112
Score = 52.0 bits (123), Expect = 2e-07
Identities = 22/37 (59%), Positives = 33/37 (88%)
Frame = +1
Query: 315 RDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRER 351
++R+R +ER+RER+R R+RER R+R+R RER+R+RER
Sbjct: 1 QERERERERERERERERERERERERERERERERERER 111
Score = 52.0 bits (123), Expect = 2e-07
Identities = 22/36 (61%), Positives = 32/36 (88%)
Frame = +1
Query: 321 KERDRERDRGRDRERGRDRDRGRERDRDRERDHERD 356
+ER+RER+R R+RER R+R+R RER+R+RER+ ER+
Sbjct: 1 QERERERERERERERERERERERERERERERERERE 108
Score = 51.6 bits (122), Expect = 3e-07
Identities = 22/36 (61%), Positives = 32/36 (88%)
Frame = +2
Query: 317 RDRGKERDRERDRGRDRERGRDRDRGRERDRDRERD 352
R+R +ER+RER+R R+RER R+R+R RER+R+RER+
Sbjct: 5 RERERERERERERERERERERERERERERERERERE 112
Score = 50.8 bits (120), Expect = 5e-07
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +2
Query: 319 RGKERDRERDRGRDRERGRDRDRGRERDRDRERDHE 354
R +ER+RER+R R+RER R+R+R RER+R+RER+ E
Sbjct: 5 RERERERERERERERERERERERERERERERERERE 112
Score = 50.4 bits (119), Expect = 7e-07
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +2
Query: 323 RDRERDRGRDRERGRDRDRGRERDRDRERDHERDVE 358
R+RER+R R+RER R+R+R RER+R+RER+ ER+ E
Sbjct: 5 RERERERERERERERERERERERERERERERERERE 112
Score = 50.1 bits (118), Expect = 9e-07
Identities = 21/37 (56%), Positives = 32/37 (85%)
Frame = +1
Query: 313 RNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDR 349
+ R+R+R +ER+RER+R R+RER R+R+R RER+R+R
Sbjct: 1 QERERERERERERERERERERERERERERERERERER 111
Score = 50.1 bits (118), Expect = 9e-07
Identities = 21/36 (58%), Positives = 32/36 (88%)
Frame = +1
Query: 317 RDRGKERDRERDRGRDRERGRDRDRGRERDRDRERD 352
++R +ER+RER+R R+RER R+R+R RER+R+RER+
Sbjct: 1 QERERERERERERERERERERERERERERERERERE 108
Score = 50.1 bits (118), Expect = 9e-07
Identities = 21/37 (56%), Positives = 32/37 (85%)
Frame = +1
Query: 309 RDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRER 345
++R+R R+R+R +ER+RER+R R+RER R+R+R RER
Sbjct: 1 QERERERERERERERERERERERERERERERERERER 111
Score = 50.1 bits (118), Expect = 9e-07
Identities = 21/37 (56%), Positives = 32/37 (85%)
Frame = +1
Query: 311 RDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDR 347
++R R+R+R +ER+RER+R R+RER R+R+R RER+R
Sbjct: 1 QERERERERERERERERERERERERERERERERERER 111
Score = 48.9 bits (115), Expect = 2e-06
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +1
Query: 325 RERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDR 361
+ER+R R+RER R+R+R RER+R+RER+ ER+ E +R
Sbjct: 1 QERERERERERERERERERERERERERERERERERER 111
Score = 48.9 bits (115), Expect = 2e-06
Identities = 21/36 (58%), Positives = 31/36 (85%)
Frame = +1
Query: 323 RDRERDRGRDRERGRDRDRGRERDRDRERDHERDVE 358
++RER+R R+RER R+R+R RER+R+RER+ ER+ E
Sbjct: 1 QERERERERERERERERERERERERERERERERERE 108
Score = 48.5 bits (114), Expect = 2e-06
Identities = 20/36 (55%), Positives = 30/36 (82%)
Frame = +2
Query: 306 RHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDR 341
R R+R+R R+R+R +ER+RER+R R+RER R+R+R
Sbjct: 2 RRERERERERERERERERERERERERERERERERER 109
Score = 47.4 bits (111), Expect = 6e-06
Identities = 20/36 (55%), Positives = 30/36 (82%)
Frame = +2
Query: 331 RDRERGRDRDRGRERDRDRERDHERDVEHDRYREKD 366
R+RER R+R+R RER+R+RER+ ER+ E +R RE++
Sbjct: 5 RERERERERERERERERERERERERERERERERERE 112
Score = 47.0 bits (110), Expect = 7e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +2
Query: 329 RGRDRERGRDRDRGRERDRDRERDHERDVEHDRYRE 364
R R+RER R+R+R RER+R+RER+ ER+ E +R RE
Sbjct: 5 RERERERERERERERERERERERERERERERERERE 112
Score = 47.0 bits (110), Expect = 7e-06
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +1
Query: 262 EERHADRDREKSRERGKDRDRERERSRERSSDKARDR 298
+ER +R+RE+ RER ++R+RERER RER ++ R+R
Sbjct: 1 QERERERERERERERERERERERERERERERERERER 111
Score = 46.6 bits (109), Expect = 9e-06
Identities = 19/37 (51%), Positives = 31/37 (83%)
Frame = +1
Query: 331 RDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDK 367
++RER R+R+R RER+R+RER+ ER+ E +R RE+++
Sbjct: 1 QERERERERERERERERERERERERERERERERERER 111
Score = 46.2 bits (108), Expect = 1e-05
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +2
Query: 261 REERHADRDREKSRERGKDRDRERERSRERSSDKARD 297
R ER +R+RE+ RER ++R+RERER RER ++ R+
Sbjct: 2 RRERERERERERERERERERERERERERERERERERE 112
Score = 46.2 bits (108), Expect = 1e-05
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +1
Query: 327 RDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYR 363
++R R+RER R+R+R RER+R+RER+ ER+ E +R R
Sbjct: 1 QERERERERERERERERERERERERERERERERERER 111
Score = 46.2 bits (108), Expect = 1e-05
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +2
Query: 267 DRDREKSRERGKDRDRERERSRERSSDKARDRDRD 301
+R+RE+ RER ++R+RERER RER ++ R+R+R+
Sbjct: 8 ERERERERERERERERERERERERERERERERERE 112
Score = 46.2 bits (108), Expect = 1e-05
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +3
Query: 267 DRDREKSRERGKDRDRERERSRERSSDKARDRDRD 301
+R+RE+ RER ++R+RERER RER ++ R+R+R+
Sbjct: 6 ERERERERERERERERERERERERERERERERERE 110
Score = 46.2 bits (108), Expect = 1e-05
Identities = 19/36 (52%), Positives = 30/36 (82%)
Frame = +2
Query: 333 RERGRDRDRGRERDRDRERDHERDVEHDRYREKDKD 368
RER R+R+R RER+R+RER+ ER+ E +R RE++++
Sbjct: 5 RERERERERERERERERERERERERERERERERERE 112
Score = 45.4 bits (106), Expect = 2e-05
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +1
Query: 303 REDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDR 339
+E R+R+R R+R+R +ER+RER+R R+RER R+R
Sbjct: 1 QERERERERERERERERERERERERERERERERERER 111
Score = 45.1 bits (105), Expect = 3e-05
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = +2
Query: 264 RHADRDREKSRERGKDRDRERERSRERSSDKARDRD 299
R +R+RE+ RER ++R+RERER RER ++ R+R+
Sbjct: 5 RERERERERERERERERERERERERERERERERERE 112
Score = 44.7 bits (104), Expect = 4e-05
Identities = 18/36 (50%), Positives = 30/36 (83%)
Frame = +1
Query: 333 RERGRDRDRGRERDRDRERDHERDVEHDRYREKDKD 368
+ER R+R+R RER+R+RER+ ER+ E +R RE++++
Sbjct: 1 QERERERERERERERERERERERERERERERERERE 108
Score = 44.3 bits (103), Expect = 5e-05
Identities = 19/36 (52%), Positives = 27/36 (74%)
Frame = +2
Query: 300 RDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRER 335
R RE R+R+R R+R+R +ER+RER+R R+RER
Sbjct: 2 RRERERERERERERERERERERERERERERERERER 109
Score = 43.9 bits (102), Expect = 6e-05
Identities = 17/37 (45%), Positives = 28/37 (74%)
Frame = +1
Query: 270 REKSRERGKDRDRERERSRERSSDKARDRDRDHREDR 306
+E+ RER ++R+RERER RER ++ R+R+R+ +R
Sbjct: 1 QERERERERERERERERERERERERERERERERERER 111
Score = 43.9 bits (102), Expect = 6e-05
Identities = 17/34 (50%), Positives = 28/34 (82%)
Frame = +1
Query: 268 RDREKSRERGKDRDRERERSRERSSDKARDRDRD 301
++RE+ RER ++R+RERER RER ++ R+R+R+
Sbjct: 1 QERERERERERERERERERERERERERERERERE 102
Score = 43.5 bits (101), Expect = 8e-05
Identities = 18/36 (50%), Positives = 29/36 (80%)
Frame = +2
Query: 335 RGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYE 370
R R+R+R RER+R+RER+ ER+ E +R RE++++ E
Sbjct: 5 RERERERERERERERERERERERERERERERERERE 112
Score = 42.7 bits (99), Expect = 1e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 259 RVREERHADRDREKSRERGKDRDRERERSRERSSDK 294
R ER +R+RE+ RER ++R+RERER RER ++
Sbjct: 2 RRERERERERERERERERERERERERERERERERER 109
Score = 42.7 bits (99), Expect = 1e-04
Identities = 21/36 (58%), Positives = 27/36 (74%), Gaps = 1/36 (2%)
Frame = +1
Query: 256 EEPRVRE-ERHADRDREKSRERGKDRDRERERSRER 290
E R RE ER +R+RE+ RER ++R+RERER RER
Sbjct: 4 ERERERERERERERERERERERERERERERERERER 111
Score = 42.4 bits (98), Expect = 2e-04
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 RSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRE 289
R E R RE ER +R+RE+ RER ++R+RERER RE
Sbjct: 2 RRERERERERERERERERERERERERERERERERERE 112
Score = 41.6 bits (96), Expect = 3e-04
Identities = 20/35 (57%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = +1
Query: 257 EPRVRE-ERHADRDREKSRERGKDRDRERERSRER 290
+ R RE ER +R+RE+ RER ++R+RERER RER
Sbjct: 1 QERERERERERERERERERERERERERERERERER 105
Score = 40.8 bits (94), Expect = 5e-04
Identities = 16/34 (47%), Positives = 28/34 (82%)
Frame = +1
Query: 337 RDRDRGRERDRDRERDHERDVEHDRYREKDKDYE 370
++R+R RER+R+RER+ ER+ E +R RE++++ E
Sbjct: 1 QERERERERERERERERERERERERERERERERE 102
Score = 38.1 bits (87), Expect = 0.003
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 251 GPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERER 286
G E R RE ER +R+RE+ RER ++R+RERER
Sbjct: 3 GERERERERERERERERERERERERERERERERERER 113
Score = 33.9 bits (76), Expect = 0.064
Identities = 15/37 (40%), Positives = 22/37 (58%)
Frame = +1
Query: 248 QQSGPSRSEEPRVREERHADRDREKSRERGKDRDRER 284
Q+ R E ER +R+RE+ RER ++R+RER
Sbjct: 1 QERERERERERERERERERERERERERERERERERER 111
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.313 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,259,959
Number of Sequences: 28460
Number of extensions: 143924
Number of successful extensions: 4724
Number of sequences better than 10.0: 316
Number of HSP's better than 10.0 without gapping: 1589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3664
length of query: 502
length of database: 4,897,600
effective HSP length: 94
effective length of query: 408
effective length of database: 2,222,360
effective search space: 906722880
effective search space used: 906722880
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Medicago: description of AC148484.9