BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148398.1 + phase: 2 /pseudo/partial
(2332 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP053299 220 2e-57
TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%) 45 1e-04
TC8412 weakly similar to UP|Q9LW00 (Q9LW00) Genomic DNA, chromos... 44 4e-04
TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Ar... 39 0.007
TC12988 similar to UP|CYP1_BRUMA (Q27450) Peptidylprolyl isomera... 37 0.035
TC9358 weakly similar to GB|AAH10781.1|14789753|BC010781 RIO kin... 35 0.13
BP038623 34 0.23
TC19515 similar to UP|Q9YGK0 (Q9YGK0) Vitellogenin precursor, pa... 34 0.23
BP048490 32 0.87
BP036655 32 0.87
TC14791 similar to UP|Q9LJ04 (Q9LJ04) ESTs AU082210(C53655), par... 32 0.87
BI419029 32 0.87
TC16422 similar to PIR|T05653|T05653 amino acid transport protei... 32 1.1
TC15394 similar to UP|Q9FFQ8 (Q9FFQ8) Emb|CAB62360.1, partial (16%) 32 1.5
CN825654 31 2.5
TC16252 31 2.5
TC8261 similar to UP|Q8LPE6 (Q8LPE6) Epoxide hydrolase (Fragmen... 31 2.5
CB829198 31 2.5
BP038231 30 3.3
>BP053299
Length = 522
Score = 220 bits (560), Expect = 2e-57
Identities = 107/149 (71%), Positives = 125/149 (83%)
Frame = +2
Query: 410 DRESYMLLHKIFDEFASLWMSMKVYAKSKSDHDAQQFKFKPRAFQIESIMELEIPALANS 469
DR SY LLHKIFDEFA LW+S KV AKS+SD AQQFK KPRAFQIES++E EI L +S
Sbjct: 74 DRGSYTLLHKIFDEFARLWISKKVNAKSESDSKAQQFKLKPRAFQIESVIEDEIETLGSS 253
Query: 470 SATEAFSDWKEFSYEEKSADNMESSEECEILDEEWKHLEESILDNVVLIHSQLFGSGDLV 529
+ FS+WKEFS+EEKSADNMES+EEC+ILDEEWK LEESIL N+VLIH+ LFGSGDL+
Sbjct: 254 CPAKTFSEWKEFSFEEKSADNMESAEECDILDEEWKQLEESILGNLVLIHNMLFGSGDLI 433
Query: 530 QAPGIFEISDEDRLHSFSESYKLGINLIK 558
QAPG F++SD DRL SFS+SY GI+L+K
Sbjct: 434 QAPGTFQVSDTDRLFSFSDSYAFGIDLMK 520
>TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)
Length = 1008
Score = 45.4 bits (106), Expect = 1e-04
Identities = 40/159 (25%), Positives = 62/159 (38%), Gaps = 2/159 (1%)
Frame = -2
Query: 1448 QKKEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDCDGENEELESEMGPTGPD 1507
Q +++Q +++ GND+ G +ED DG+ E E + D
Sbjct: 647 QSEDKQHDAEGEDGNDDEG--------------------DEDDDGDGPFGEGEEDLSSED 528
Query: 1508 SEAVGEKIWDQNEDETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDSCDEGD 1567
G N ++ + E GP G N E +D+ DQ DD DE D
Sbjct: 527 GAGYG------NNSNNKSNSKKAPEGGPGAGAGPEENGE-DEEDEDGEDQEDDDDDDEDD 369
Query: 1568 AQNDEAAAQNEFDDEENG--DDVNMDKEAAHSDATGLKP 1604
+ D+ D+EE G ++ N D+E D L+P
Sbjct: 368 DEEDDGGE----DEEEEGVEEEDNEDEEEDEEDEEALQP 264
Score = 42.0 bits (97), Expect = 0.001
Identities = 42/174 (24%), Positives = 62/174 (35%)
Frame = -2
Query: 1477 AVSLSEDSSENEDCDGENEELESEMGPTGPDSEAVGEKIWDQNEDETPDDTGEKYESGPS 1536
A + E S++ED + E G G D E +ED+ D + E S
Sbjct: 674 ATTKGETKSQSEDKQHDAE------GEDGNDDEG--------DEDDDGDGPFGEGEEDLS 537
Query: 1537 VKDGDGSNKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAH 1596
+DG G K +S G G +N E + +D+E+ DD
Sbjct: 536 SEDGAGYGNNSNNKSNSKKAPEGGPGAGAGPEENGEDEEDEDGEDQEDDDD--------- 384
Query: 1597 SDATGLKPDEPDHSSDMEIDLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPP 1650
D D E D +E+ + +EE D E D E+ E+ PP
Sbjct: 383 ----------DDEDDDEEDDGGEDEEEEGVEEEDNE---DEEEDEEDEEALQPP 261
Score = 36.2 bits (82), Expect = 0.060
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 14/120 (11%)
Frame = -2
Query: 1551 DDSTSDQSGDD-SCDEGDAQNDEAAAQNEFDDEENGDD-----------VNMDKEAAHSD 1598
+D D G+D + DEGD +D E +++ + +D N K
Sbjct: 641 EDKQHDAEGEDGNDDEGDEDDDGDGPFGEGEEDLSSEDGAGYGNNSNNKSNSKKAPEGGP 462
Query: 1599 ATGLKPDEPDHSSDMEIDLNANEDVDPIEEGDQE--GHDDSAENGNQEDETCPPDEIMEE 1656
G P+E + E + +D D E+ D+E G +D E G +E++ +E E+
Sbjct: 461 GAGAGPEENGEDEEDEDGEDQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDNEDEEEDEED 282
Score = 31.6 bits (70), Expect = 1.5
Identities = 32/149 (21%), Positives = 63/149 (41%), Gaps = 3/149 (2%)
Frame = -2
Query: 1554 TSDQSGDDSCD-EGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSD 1612
T QS D D EG+ ND+ + + DD+ +G +++ + D G + + S+
Sbjct: 656 TKSQSEDKQHDAEGEDGNDD---EGDEDDDGDGPFGEGEEDLSSEDGAGYGNNSNNKSNS 486
Query: 1613 MEIDLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDVSSEKDDLGQ 1672
+ EG ENG E++ D+ ++ E D E+DD G+
Sbjct: 485 KKAP-----------EGGPGAGAGPEENGEDEEDEDGEDQEDDDDDDEDD--DEEDDGGE 345
Query: 1673 EHQEN--DDMNSMDPKNDTSESSDVVNPQ 1699
+ +E ++ ++ D + D + + P+
Sbjct: 344 DEEEEGVEEEDNEDEEEDEEDEEALQPPK 258
>TC8412 weakly similar to UP|Q9LW00 (Q9LW00) Genomic DNA, chromosome 3, P1
clone: MSJ11, partial (39%)
Length = 1403
Score = 43.5 bits (101), Expect = 4e-04
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 4/192 (2%)
Frame = +3
Query: 1484 SSENEDCDGENEELES---EMGPTGPDSEAVGEKIWDQNEDETPDDTGEKYESGPSVKDG 1540
S+ +D GE E+ E+ EM G +AV E N+DE + + + +
Sbjct: 405 SASKKDASGEEEKEETKDVEMQEAGETKDAVKE-----NQDENKAEDTDVNQDEKKAEAT 569
Query: 1541 DGSNKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDAT 1600
D + E RA+D + + + D NDE ++ + + DK A SDA
Sbjct: 570 DANQDEKRAEDADVKEPTHPG--ENTDGPNDEGKLNTADEELQASKEKVDDKGAEGSDAV 743
Query: 1601 GLKPDEPDHSSDMEIDLNANEDVDPIEEGDQEGHDDSA-ENGNQEDETCPPDEIMEEAHT 1659
K D E + ++ +E ++E HD E+G +D+ ++ +E H
Sbjct: 744 QNKDDGSGEPEKSEAAPTTEQKIE-VEGENKEEHDRGIHESGEIKDK--EGAKVNDEEHF 914
Query: 1660 EVDVSSEKDDLG 1671
+V ++K + G
Sbjct: 915 KVHDINQKTESG 950
>TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;}, partial (44%)
Length = 700
Score = 39.3 bits (90), Expect = 0.007
Identities = 33/138 (23%), Positives = 58/138 (41%)
Frame = +2
Query: 1454 EESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDCDGENEELESEMGPTGPDSEAVGE 1513
+E + G D+ G E D D DA +D + ED + E +E G G + +
Sbjct: 26 DEDDDDDGEDDDGDEDDDD---DAPGGGDDDDDEED-EEEEGGVEGGRGGGGDPDDDDDD 193
Query: 1514 KIWDQNEDETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDSCDEGDAQNDEA 1573
D E+E +D G +Y +V + E + D + GDD+ ++ +
Sbjct: 194 DDDDDEEEEEEEDLGTEYLVRRTVA---AAEDEEASSDFEPEEDEGDDNDNDDGEKAGVP 364
Query: 1574 AAQNEFDDEENGDDVNMD 1591
+ + D + +GDD + D
Sbjct: 365 SKRKRSDKDGSGDDDSDD 418
Score = 38.5 bits (88), Expect = 0.012
Identities = 32/140 (22%), Positives = 59/140 (41%), Gaps = 26/140 (18%)
Frame = +2
Query: 1533 SGPSVKDGDGSNKELRAKDDSTSDQSGDDSCDEGDAQND------EAAAQNEFDDEENGD 1586
SG D DG + + DD + GDD DE D + + + DD+++ D
Sbjct: 20 SGDEDDDDDGEDDDGDEDDDDDAPGGGDDDDDEEDEEEEGGVEGGRGGGGDPDDDDDDDD 199
Query: 1587 DVNMDKEAAHS-------DATGLKPDEPDHSSDMEIDLNANEDVDPIEEGDQEG------ 1633
D + ++E T ++ + SSD E + + +D D ++G++ G
Sbjct: 200 DDDEEEEEEEDLGTEYLVRRTVAAAEDEEASSDFEPEEDEGDDNDN-DDGEKAGVPSKRK 376
Query: 1634 -------HDDSAENGNQEDE 1646
DD +++G ++DE
Sbjct: 377 RSDKDGSGDDDSDDGGEDDE 436
Score = 37.7 bits (86), Expect = 0.021
Identities = 37/177 (20%), Positives = 61/177 (33%)
Frame = +2
Query: 1544 NKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLK 1603
N R D D G+D D+GD +D+ A DD+
Sbjct: 2 NSRTRMSGDEDDDDDGED--DDGDEDDDDDAPGGGDDDD--------------------- 112
Query: 1604 PDEPDHSSDMEIDLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDV 1663
DE D + ++ DP ++ D + DD E +E+E + ++ +
Sbjct: 113 -DEEDEEEEGGVEGGRGGGGDPDDDDDDDDDDDEEE---EEEEDLGTEYLVRRTVAAAED 280
Query: 1664 SSEKDDLGQEHQENDDMNSMDPKNDTSESSDVVNPQVSNVDLASQSKSDLQTSGSEN 1720
D E E DD + ND E + V + + +SD SG ++
Sbjct: 281 EEASSDFEPEEDEGDDND-----NDDGEKAGVP---------SKRKRSDKDGSGDDD 409
>TC12988 similar to UP|CYP1_BRUMA (Q27450) Peptidylprolyl isomerase 1
(Peptidylprolyl cis-trans isomerase 1) (PPIase 1)
(Cyclophilin) (BmCYP-1) , partial (4%)
Length = 453
Score = 37.0 bits (84), Expect = 0.035
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +2
Query: 1564 DEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDMEIDLN----- 1618
DE D N E NE+ DEE ++ D+EA L+ E D+SS+ + N
Sbjct: 5 DESDDSNAENHPMNEYPDEEEFEE--EDEEAVEDSEFELEEPESDNSSNKSSEENLEHHA 178
Query: 1619 -ANEDVDPIEEGDQEGHDDSAENGNQEDE 1646
+ DP+ D+E D N + EDE
Sbjct: 179 VSKHVADPLY--DEEFDDYEGANDDSEDE 259
>TC9358 weakly similar to GB|AAH10781.1|14789753|BC010781 RIO kinase 2 {Mus
musculus;} , partial (10%)
Length = 1117
Score = 35.0 bits (79), Expect = 0.13
Identities = 43/181 (23%), Positives = 75/181 (40%), Gaps = 15/181 (8%)
Frame = +1
Query: 1435 HVNRYVNCLLSMMQKKEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDCDGEN 1494
+ +R + C+ +K+ + + D++ D+D S SE + G
Sbjct: 274 YFDRDIECIFKFFRKRFNLTFQESIDDIDDSDEGKDEDG-------SPCLSEIDRATGSL 432
Query: 1495 EELESEMGPTGPDSEAV-----GEKIWDQNEDETPDDTGEKYESGPSVKDGDGSNKELRA 1549
+ + G T D+E + G D N D D+ E +KD D S L
Sbjct: 433 DRELAASGFTKKDAEDIQRFIEGTPESDSNSDSEGVDSVEDLNEA-IIKDDDFSY--LSE 603
Query: 1550 KDDSTSDQSGDDSC--------DEGDAQNDEAAAQNEFDDEENGDDVN--MDKEAAHSDA 1599
+DD + ++SC D+GDA ++E QNE EN ++N ++K+ H+ A
Sbjct: 604 QDDEHESKGIEESCEAGQSYASDKGDASDEEEHDQNEI---ENDAELNKSLNKQRRHAIA 774
Query: 1600 T 1600
+
Sbjct: 775 S 777
>BP038623
Length = 538
Score = 34.3 bits (77), Expect = 0.23
Identities = 23/107 (21%), Positives = 44/107 (40%)
Frame = +2
Query: 1710 KSDLQTSGSENIASQSNLSNSHHDFGNPAVTGGFPSSDMSEMDINMSDSSNTGGFSKTQP 1769
K + QT GS NI S++ +S FP + E + ++S+ +
Sbjct: 59 KHEKQTIGSGNILSEAQIS--------------FPKEETVEQNFKATESNEQRVITDLSL 196
Query: 1770 KSHLPQHEHSFSQEKQTNPSRSTGDALDFRKEKINVSGDLPEDNIEH 1816
S P H+ + S++ + L+ ++ +I G+ ED E+
Sbjct: 197 GSEDPLHQEATSRDSNEATDHEPAEKLETQETEITQEGNAKEDEFEN 337
>TC19515 similar to UP|Q9YGK0 (Q9YGK0) Vitellogenin precursor, partial (3%)
Length = 504
Score = 34.3 bits (77), Expect = 0.23
Identities = 30/116 (25%), Positives = 56/116 (47%), Gaps = 4/116 (3%)
Frame = +3
Query: 1560 DDSCDEGDAQNDEAAAQNEFDDEENGDDVNM---DKEAAHSDATGLKPDEPDHSSDMEID 1616
DD D DA++++ + + DD+++GDD + SD+ + D+ D +SD++
Sbjct: 57 DDDSDPDDAESED---EEDDDDDDDGDDEDPLLGPGLGRESDSDDMSHDDYDSASDID-- 221
Query: 1617 LNANEDVDPI-EEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDVSSEKDDLG 1671
+ED D I ++ D +G E DE + +E A ++ D + +D G
Sbjct: 222 ---DEDADFILDDLDFDGGTGLLEIVGDRDEDDDDSQELESASSD-DEDFDDNDFG 377
>BP048490
Length = 452
Score = 32.3 bits (72), Expect = 0.87
Identities = 25/97 (25%), Positives = 49/97 (49%), Gaps = 4/97 (4%)
Frame = +3
Query: 1576 QNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDMEIDLNANEDVDPIEEGDQEGHD 1635
++E D+E+ + + + ++ + T KP S+ + D + D D + D+ D
Sbjct: 12 KSESSDDESSESSDEENDSKPATTTVAKPSAVKKSASSDSDDEDSSDSDSEVKKDKMDVD 191
Query: 1636 --DSAENGNQEDE--TCPPDEIMEEAHTEVDVSSEKD 1668
DS+E+ ++EDE T P + +++ VD SS K+
Sbjct: 192 ESDSSEDSDEEDEKSTKTPQKKVKDVEM-VDASSGKN 299
>BP036655
Length = 556
Score = 32.3 bits (72), Expect = 0.87
Identities = 21/66 (31%), Positives = 36/66 (53%), Gaps = 3/66 (4%)
Frame = -3
Query: 1616 DLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDV---SSEKDDLGQ 1672
D + +E VD EE +E DD N ++ D DE+ EE+ TE++ E+++ G
Sbjct: 389 DGDDDEVVDEEEEVVEEWSDDDDINDDESD-----DEVEEESETEIETEKEEEEEEECGV 225
Query: 1673 EHQEND 1678
E+ E++
Sbjct: 224 ENVEDE 207
>TC14791 similar to UP|Q9LJ04 (Q9LJ04) ESTs AU082210(C53655), partial (37%)
Length = 1779
Score = 32.3 bits (72), Expect = 0.87
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +2
Query: 1441 NCLLSMMQKKEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDC-DGENEELES 1499
N +++ ++ EEQ++ E + +E +QD +A A + SE + E D + ES
Sbjct: 203 NNTMAVDEEPEEQDQETEDQPQIDDAVEEEQDPEAPATTESEPQQQQETLEDNADAPNES 382
Query: 1500 EMGPTGPDSEAVGEKIWDQNEDETPDD 1526
SE+V + E+E +D
Sbjct: 383 SAAAAAAASESVANGSNNNEEEEEEED 463
>BI419029
Length = 643
Score = 32.3 bits (72), Expect = 0.87
Identities = 37/172 (21%), Positives = 63/172 (36%), Gaps = 8/172 (4%)
Frame = +2
Query: 1632 EGHDDSAENGNQEDETCPPDEIMEEAHTEVDVSSEKDDLGQEHQENDDMNSMDPKNDTSE 1691
E H+ E+GN DET S + ++ + D+N+ D +
Sbjct: 170 ELHETVQESGNSADETL----------------SVQASAADQNGQTTDINNEDRNGEDGI 301
Query: 1692 SSDVVNPQVSNVDLASQSKSDLQTSGSENIASQSNLSNSHHDFGNPA-------VTGGFP 1744
+ V + D A + G AS L ++ H+ N A + P
Sbjct: 302 QTTEVRAYENGDDQAGSGAEHQEAIGEITGASGPELHDTVHESPNSADETLSAHTSAADP 481
Query: 1745 SSDMSEMDINMSDSSNTGGFSKTQPKSHLPQHEHSFS-QEKQTNPSRSTGDA 1795
SS + DIN D + G T+ +++ + + + S E Q TGD+
Sbjct: 482 SSQTT--DINHEDRNGEDGIQTTKVRAYCKEDDQA*SVSEHQEAIGEITGDS 631
>TC16422 similar to PIR|T05653|T05653 amino acid transport protein homolog
F22I13.20 - Arabidopsis thaliana
{Arabidopsis thaliana;}, partial (38%)
Length = 685
Score = 32.0 bits (71), Expect = 1.1
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Frame = -1
Query: 1561 DSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSD-MEIDLNA 1619
+ + G +++ A A++ ++ +G D + AA +A + E S+ +E+ +
Sbjct: 520 EEAESGRDEDEVADAESSLGEDNHGVDGEAAERAADGEAEVAEGSEFGVPSEGIELAASG 341
Query: 1620 NEDVDPI--EEGDQEGHDDSAENGN-----QEDETCPPDEIMEEAHTEVDVSSEKDDLGQ 1672
+E+ + EEGD E HD++ E +E E D+ E+ + E+ G+
Sbjct: 340 DEEHHAVVGEEGDGEEHDEAGEPAGSLEAVREAEDSGADDGDEDVGEGFEFGGERWGFGE 161
Query: 1673 E 1673
E
Sbjct: 160 E 158
>TC15394 similar to UP|Q9FFQ8 (Q9FFQ8) Emb|CAB62360.1, partial (16%)
Length = 1093
Score = 31.6 bits (70), Expect = 1.5
Identities = 41/226 (18%), Positives = 86/226 (37%), Gaps = 29/226 (12%)
Frame = +2
Query: 1450 KEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDCDGENEELESEMGPTGPDSE 1509
K+E +E+ P ++ E + + D + +S+ +G +
Sbjct: 29 KDESQENVAAPHKESDDDESKSEEEEDKSKAQKKTSKKIVKEGSGSKAGERTKSAKKTPV 208
Query: 1510 AVGEKIWDQNEDETPDDTGEKYESG---------PSVKDGDGSNKELRAKDDSTSDQSGD 1560
+ + + TP T +++S P+ K N++ K ++S + D
Sbjct: 209 KSSKNVDKTPKKSTPKQTAAEHDSASASLSKSKQPASKKRKTENEKPDTKGKASSKKQTD 388
Query: 1561 DSC-----DEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATG---LKPDEPDHSSD 1612
S D+G +++ + A + + V++ KE + AT L+P D
Sbjct: 389 KSSKALVKDQGKSKSGKKAKAVPSREAMHAVVVDILKEVDFNTATLSDILRPLGTHFGVD 568
Query: 1613 M------------EIDLNANEDVDPIEEGDQEGHDDSAENGNQEDE 1646
+ ++ N +++ D EE D +G D +NG+ +DE
Sbjct: 569 LMHRKAEVKDIITDVINNMSDEEDEGEEADGDGDADKDDNGDDDDE 706
>CN825654
Length = 580
Score = 30.8 bits (68), Expect = 2.5
Identities = 31/130 (23%), Positives = 49/130 (36%)
Frame = +2
Query: 1443 LLSMMQKKEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDCDGENEELESEMG 1502
LL + +++ EE E+ G D ++D Q + + + S+ G +
Sbjct: 56 LLGDGEDEDDDEEKSELTGED------EEDEQVVSFAGKKKPSKGGSKKGGASLFTASAF 217
Query: 1503 PTGPDSEAVGEKIWDQNEDETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDS 1562
D GE +Q E+E K + K G GS A DD D+S
Sbjct: 218 DAIDDENDGGE---EQEEEEPVVSFAGKKKPSKGSKKGGGSLFNAAAFDDDNDGDVMDNS 388
Query: 1563 CDEGDAQNDE 1572
D+G ND+
Sbjct: 389 VDDGRDGNDD 418
>TC16252
Length = 550
Score = 30.8 bits (68), Expect = 2.5
Identities = 20/62 (32%), Positives = 28/62 (44%)
Frame = +2
Query: 1580 DDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDMEIDLNANEDVDPIEEGDQEGHDDSAE 1639
D EEN D MD + D T + P+E SSD + N+D EEG + +
Sbjct: 68 DHEENSDHAAMDCQDNTLDQTRVLPNEA--SSDAHMTDQVNQDAQVNEEGSMLVDEGGIQ 241
Query: 1640 NG 1641
+G
Sbjct: 242 SG 247
>TC8261 similar to UP|Q8LPE6 (Q8LPE6) Epoxide hydrolase (Fragment) ,
partial (48%)
Length = 709
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -1
Query: 772 LGQNHTSACLKINSSNIVFFLHCWTLQLLSDGAVNILVQYVWILCAVLTNH 822
L Q H L I+ + ++F + WT +L D + ++ ++W L V +H
Sbjct: 481 LVQFHNFPSLIISHNKFIYF-NFWTRSVLLDEVIYVIANFIWCLLVVEVSH 332
>CB829198
Length = 562
Score = 30.8 bits (68), Expect = 2.5
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 1449 KKEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDCDGENE 1495
++EEQ + +E P ND ++++ +D+ E++ E ED DG+NE
Sbjct: 228 QEEEQHDDQEEPQND----DVEESQHSDS---KEETEEEEDEDGDNE 347
>BP038231
Length = 513
Score = 30.4 bits (67), Expect = 3.3
Identities = 28/102 (27%), Positives = 39/102 (37%), Gaps = 7/102 (6%)
Frame = -3
Query: 1450 KEEQEESKEVPGNDNTGIEM---DQDFQADAVSLSEDSSENEDCDGENEE----LESEMG 1502
+E+ EE E G+ + G D D + D +ED E D N + E
Sbjct: 511 EEDDEEESEESGSSSEGSFRQFSDDDIEMDG---TEDDDEEYFDDEYNPRRPLYYDDEYR 341
Query: 1503 PTGPDSEAVGEKIWDQNEDETPDDTGEKYESGPSVKDGDGSN 1544
GP S A G D EDE ++ G D DG++
Sbjct: 340 APGPVSVAFGHPAADSEEDEDVEEYDFDAGVGADDDDADGAS 215
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,768,640
Number of Sequences: 28460
Number of extensions: 502697
Number of successful extensions: 2878
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 2753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2854
length of query: 2332
length of database: 4,897,600
effective HSP length: 105
effective length of query: 2227
effective length of database: 1,909,300
effective search space: 4252011100
effective search space used: 4252011100
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Medicago: description of AC148398.1