BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148396.10 + phase: 0 /partial
(673 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8353 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa pro... 675 0.0
TC14233 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (67%) 353 4e-98
TC14234 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (66%) 325 8e-91
TC18256 homologue to UP|Q9M4E8 (Q9M4E8) Heat shock protein 70, p... 198 2e-51
BP040870 192 1e-49
TC9795 homologue to UP|Q9ATB8 (Q9ATB8) BiP-isoform D (Fragment),... 191 4e-49
BP044919 170 8e-43
BP041494 119 1e-37
AV409958 151 4e-37
AV766006 142 2e-34
AW720237 130 9e-31
TC18168 homologue to UP|Q8GSN4 (Q8GSN4) Non-cell-autonomous heat... 124 4e-29
AV769455 120 9e-28
BP064075 114 5e-26
AW163930 111 4e-25
TC12812 weakly similar to UP|Q8RVV9 (Q8RVV9) Heat shock protein ... 95 3e-20
AW428869 79 2e-15
CB827219 72 2e-13
BP083571 69 2e-12
BP033771 64 8e-11
>TC8353 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa protein,
mitochondrial precursor, partial (74%)
Length = 1752
Score = 675 bits (1741), Expect(2) = 0.0
Identities = 351/371 (94%), Positives = 363/371 (97%), Gaps = 1/371 (0%)
Frame = +3
Query: 175 ETAEAYLGKTVPKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALSYGM-NK 233
ETAEAYLGK+V KAVITVPAYFNDA RQATKDAGRIAGL+V RIINEPTAAALSYGM NK
Sbjct: 3 ETAEAYLGKSVSKAVITVPAYFNDAHRQATKDAGRIAGLDVQRIINEPTAAALSYGMTNK 182
Query: 234 EGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRSESI 293
EGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLV+EFKR+ESI
Sbjct: 183 EGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVDEFKRTESI 362
Query: 294 DLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVN 353
DLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVN
Sbjct: 363 DLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVN 542
Query: 354 NLIERTKAPCQSCLKDANISTKDIDEVLLVGGMTRVPKVQEVVSTIFGKSPCKGVNPDEA 413
+LIERTKAPC++CLKDANIS K++DEVLLVGGMTRVPKVQEVVS IFGKSP KGVNPDEA
Sbjct: 543 HLIERTKAPCKNCLKDANISIKEVDEVLLVGGMTRVPKVQEVVSAIFGKSPSKGVNPDEA 722
Query: 414 VAMGAALQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAA 473
VAMGAA+QGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAA
Sbjct: 723 VAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAA 902
Query: 474 DNQTQVGIKVLQGEREMASDNKMLGEFELVGLPPAPRGMPQIEVTFDIDANGIVTVSAKD 533
DNQTQVGIKVLQGEREMASDNK LGEFELVG+PPAPRG+PQIEVTFDIDANGIVTVSAKD
Sbjct: 903 DNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGLPQIEVTFDIDANGIVTVSAKD 1082
Query: 534 KSTGKEQQITI 544
KSTGKEQQITI
Sbjct: 1083KSTGKEQQITI 1115
Score = 220 bits (560), Expect(2) = 0.0
Identities = 115/130 (88%), Positives = 123/130 (94%), Gaps = 2/130 (1%)
Frame = +2
Query: 546 SSGGLSDDEIQNMVKEAELHAQKDQERKSLIDIRNSADTSIYSIEKSLSEYREKIPAEVA 605
SSGGLSDDEI+ MVKEAELHAQKDQERK+LIDIRNSADTSIYSIEKSL EYR+KIP+EVA
Sbjct: 1121 SSGGLSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTSIYSIEKSLGEYRDKIPSEVA 1300
Query: 606 KEIEDAVSDLRSAMAGDSADEIKSKLDAANKAVSKIGEHMSGGSSSGPSS--DGSQGGDQ 663
KEIEDAVS+LR+AM+GD+ADEIKSKLDAANKAVSKIGEHMSGG SSG SS GSQGGDQ
Sbjct: 1301 KEIEDAVSELRTAMSGDNADEIKSKLDAANKAVSKIGEHMSGGGSSGGSSTGGGSQGGDQ 1480
Query: 664 APEAEYEEVK 673
APEAEYEEVK
Sbjct: 1481 APEAEYEEVK 1510
>TC14233 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (67%)
Length = 1570
Score = 353 bits (907), Expect = 4e-98
Identities = 196/428 (45%), Positives = 274/428 (63%), Gaps = 11/428 (2%)
Frame = +1
Query: 249 VSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRSESIDLSKDKLALQRLREA 308
VS+L I G+FEVKAT GDT LGGEDFDN +++ V EFKR D+S + AL+RLR A
Sbjct: 1 VSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTA 180
Query: 309 AEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNNLIERTKAPCQSCLK 368
E+AK LSST+QT I + + +TR++FE + +L + P + CL+
Sbjct: 181 CERAKRTLSSTAQTTIEIDSLYEGID----FYSPITRARFEEMNMDLFRKCMEPVEKCLR 348
Query: 369 DANISTKDIDEVLLVGGMTRVPKVQEVVSTIF-GKSPCKGVNPDEAVAMGAALQGGILRG 427
DA + + + +V+LVGG TR+PKVQ+++ F GK CK +NPDEAVA GAA+Q IL G
Sbjct: 349 DAKMDKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 528
Query: 428 D----VKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKV 483
+ V++LLLLDVTPLSLG+ET GG+ T LI RNTTIPTKK QVFST +DNQ V I+V
Sbjct: 529 EGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQV 708
Query: 484 LQGEREMASDNKMLGEFELVGLPPAPRGMPQIEVTFDIDANGIVTVSAKDKSTGKEQQIT 543
+GER DN +LG+FEL G+PPAPRG+PQI V FDIDANGI+ VSA+DK+TG++ +IT
Sbjct: 709 FEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKIT 888
Query: 544 I-KSSGGLSDDEIQNMVKEAELHAQKDQERKSLIDIRNSADTSIYSIEKSLSEYR--EKI 600
I G LS D+I+ MV+EAE + +D+E K ++ +N+ + Y++ ++ + + K+
Sbjct: 889 ITNDKGRLSKDDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIAGKL 1068
Query: 601 PAEVAKEIEDAVSDLRSAMAGD---SADEIKSKLDAANKAVSKIGEHMSGGSSSGPSSDG 657
+ +IEDA+ + + ADE + K+ + I M G + GP G
Sbjct: 1069DSADKTKIEDAIEQAIQWLESNQLAEADEFEDKMKELESICNPIIAKMYQGGAGGPDVGG 1248
Query: 658 SQGGDQAP 665
+ + AP
Sbjct: 1249AAEEEYAP 1272
>TC14234 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (66%)
Length = 1528
Score = 325 bits (834), Expect(2) = 8e-91
Identities = 185/418 (44%), Positives = 261/418 (62%), Gaps = 16/418 (3%)
Frame = +3
Query: 271 GGEDFDNALLDFLVNEFKRSESIDLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFIT 330
GGEDFDN +++ V EFKR D+S + AL+RLR A E+AK LSST+QT I + +
Sbjct: 48 GGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY 227
Query: 331 ADASGAKHLNITLTRSKFEALVNNLIERTKAPCQSCLKDANISTKDIDEVLLVGGMTRVP 390
+TR++FE L +L + P + CL+DA + K + +V+LVGG TR+P
Sbjct: 228 EGID----FYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKKSVHDVVLVGGSTRIP 395
Query: 391 KVQEVVSTIF-GKSPCKGVNPDEAVAMGAALQGGILRGD----VKELLLLDVTPLSLGIE 445
KVQ+++ F GK CK +NPDEAVA GAA+Q IL G+ V++LLLLDVTPLSLG+E
Sbjct: 396 KVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLE 575
Query: 446 TLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKMLGEFELVGL 505
T GG+ T LI RNTTIPTKK QVFST +DNQ V I+V +GER DN +LG+FEL G+
Sbjct: 576 TAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGI 755
Query: 506 PPAPRGMPQIEVTFDIDANGIVTVSAKDKSTGKEQQITI-KSSGGLSDDEIQNMVKEAEL 564
PPAPRG+PQI V FDIDANGI+ VSA+DK+TG++ +ITI G LS ++I+ MV+EAE
Sbjct: 756 PPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEK 935
Query: 565 HAQKDQERKSLIDIRNSADTSIYSIEKSLSEYR--EKIPAEVAKEIEDAVSDL------- 615
+ +D+E K ++ +N+ + Y++ ++ + + K+ K+IEDA+
Sbjct: 936 YKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIGGKLDPADKKKIEDAIEQAIQWLDSN 1115
Query: 616 RSAMAGDSADEIKSKLDAANKAVSKIGEHMSGGSSSG-PSSDGSQGGDQAPEAEYEEV 672
+ A A + D++K N ++K+ + G G P D + G + EEV
Sbjct: 1116QLAEADEFEDKMKELESICNPIIAKMYQGAGGPDMGGAPMDDDTPAGGSGAGPKIEEV 1289
Score = 26.2 bits (56), Expect(2) = 8e-91
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 257 GVFEVKATNGDTFL 270
G+FEVKAT GDT L
Sbjct: 7 GIFEVKATAGDTHL 48
>TC18256 homologue to UP|Q9M4E8 (Q9M4E8) Heat shock protein 70, partial
(24%)
Length = 476
Score = 198 bits (504), Expect = 2e-51
Identities = 99/158 (62%), Positives = 124/158 (77%), Gaps = 5/158 (3%)
Frame = +3
Query: 384 GGMTRVPKVQEVVSTIF-GKSPCKGVNPDEAVAMGAALQGGILRGD----VKELLLLDVT 438
GG TR+PKVQ+++ F GK P KGVNPDEAVA GAA+QG IL G+ K++LLLDV
Sbjct: 3 GGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVA 182
Query: 439 PLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKMLG 498
PL+LGIET+GG+ T+LI RNT IPTKKSQVF+T D QT V I+V +GER + D ++LG
Sbjct: 183 PLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLG 362
Query: 499 EFELVGLPPAPRGMPQIEVTFDIDANGIVTVSAKDKST 536
+F+L G+PPAPRG PQIEVTF++DANGI+ V A+DK T
Sbjct: 363 KFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGT 476
>BP040870
Length = 505
Score = 192 bits (489), Expect = 1e-49
Identities = 100/167 (59%), Positives = 125/167 (73%), Gaps = 8/167 (4%)
Frame = +2
Query: 153 VEAKGQ--QYSPSQIGAFVLTKMKETAEAYLGKTVPKAVITVPAYFNDAQRQATKDAGRI 210
V KG+ Q+S +I + VL KMKE AEAYLG T+ AV+TVPAYFND+QRQATKDAG I
Sbjct: 5 VNYKGEEKQFSAEEISSMVLMKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVI 184
Query: 211 AGLEVLRIINEPTAAALSYGMNK------EGLIAVFDLGGGTFDVSILEISNGVFEVKAT 264
+GL V+RIINEPTAAA++YG++K E + +FDLGGGTFDVS+L I G+FEVK+T
Sbjct: 185 SGLNVMRIINEPTAAAIAYGLDKKATSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKST 364
Query: 265 NGDTFLGGEDFDNALLDFLVNEFKRSESIDLSKDKLALQRLREAAEK 311
GDT LGGEDFDN +++ V EFKR D+S + AL+RLR A E+
Sbjct: 365 AGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNARALRRLRTACER 505
>TC9795 homologue to UP|Q9ATB8 (Q9ATB8) BiP-isoform D (Fragment), partial
(63%)
Length = 981
Score = 191 bits (484), Expect = 4e-49
Identities = 101/175 (57%), Positives = 125/175 (70%), Gaps = 5/175 (2%)
Frame = +1
Query: 54 VIGIDLGTTNSCVSVMEGKNPKVVENSEGARTTPSVVAFTQKGELLVGTPAKRQAVTNPE 113
VIGIDLGTT SCV V + +++ N +G R TPS VAF GE L+G AK Q NPE
Sbjct: 151 VIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFND-GERLIGEAAKNQFAVNPE 327
Query: 114 NTISGAKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEAKGQQ-----YSPSQIGAF 168
TI KRLIGR+F+D + Q++MK+VPYKIV +G +++ K + +SP ++ A
Sbjct: 328 RTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNK-DGKPYIQVKIKDGETKVFSPEEVSAM 504
Query: 169 VLTKMKETAEAYLGKTVPKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPT 223
+LTKMKETAEA+LGK + AV+TVPAYFNDAQRQATKDAG IAGL V RIINEPT
Sbjct: 505 ILTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPT 669
Score = 117 bits (293), Expect = 6e-27
Identities = 62/112 (55%), Positives = 78/112 (69%), Gaps = 3/112 (2%)
Frame = +2
Query: 213 LEVLRIINEPTAAALSYGMNKEG---LIAVFDLGGGTFDVSILEISNGVFEVKATNGDTF 269
L +L + P AAA++YG++K+G I VFDLGGGTFDVSIL I NGVFEV ATNGDT
Sbjct: 638 LMLLELSMNPPAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTH 817
Query: 270 LGGEDFDNALLDFLVNEFKRSESIDLSKDKLALQRLREAAEKAKIELSSTSQ 321
LGGEDFD ++++ + K+ D+SKD AL +LR AE+AK LSS Q
Sbjct: 818 LGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQ 973
>BP044919
Length = 519
Score = 170 bits (430), Expect = 8e-43
Identities = 90/164 (54%), Positives = 119/164 (71%), Gaps = 10/164 (6%)
Frame = +3
Query: 124 GRRFDDPQTQKEMKMVPYKIVKAPNGDAW--VEAKGQQYS--PSQIGAFVLTKMKETAEA 179
GR++ D Q+++K+ P+K++ + V+ KG++ P +I + VL+KMKE AEA
Sbjct: 27 GRKYSDSVIQEDVKLWPFKVIAGTDDKPMIVVKHKGEEKKLVPEEISSMVLSKMKEIAEA 206
Query: 180 YLGKTVPKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALSYGMNK------ 233
+L +V AV+TVPAYFNDAQR+ATKDAG IAGL V+RIINEPTAAAL+YG+ K
Sbjct: 207 FLESSVKNAVVTVPAYFNDAQRKATKDAGTIAGLNVMRIINEPTAAALAYGLQKRANLVG 386
Query: 234 EGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDN 277
E + +FDLGGGTFDVS+L I + FEVKAT+GDT LG +DFDN
Sbjct: 387 ERNVFIFDLGGGTFDVSLLTIKDDNFEVKATSGDTHLGXKDFDN 518
>BP041494
Length = 572
Score = 119 bits (297), Expect(2) = 1e-37
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 4/109 (3%)
Frame = +3
Query: 119 AKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWV----EAKGQQYSPSQIGAFVLTKMK 174
AKRLIGR+F D + +MK+ P+K++ P + + + +Q++ +I + VL KM+
Sbjct: 246 AKRLIGRKFSDDSVESDMKLWPFKVISGPVDRPMIVVNYKNEEKQFTAEEISSMVLIKMR 425
Query: 175 ETAEAYLGKTVPKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPT 223
E AEAYLG TV V+TVPAYFND+QRQATKDAG IAGL V+RIINEPT
Sbjct: 426 EIAEAYLGSTVKNVVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPT 572
Score = 55.5 bits (132), Expect(2) = 1e-37
Identities = 29/53 (54%), Positives = 35/53 (65%)
Frame = +1
Query: 55 IGIDLGTTNSCVSVMEGKNPKVVENSEGARTTPSVVAFTQKGELLVGTPAKRQ 107
IGIDLGTT SCV V + +++ N +G RTTPS VAFT E L+G AK Q
Sbjct: 88 IGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTD-FERLIGDAAKNQ 243
>AV409958
Length = 389
Score = 151 bits (381), Expect = 4e-37
Identities = 74/126 (58%), Positives = 98/126 (77%)
Frame = +2
Query: 279 LLDFLVNEFKRSESIDLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKH 338
++D+L +FKR+E IDL KDK ALQRL E AEKAK+ELSS +QT I+LPFITA A G KH
Sbjct: 5 IVDWLAADFKRNEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKH 184
Query: 339 LNITLTRSKFEALVNNLIERTKAPCQSCLKDANISTKDIDEVLLVGGMTRVPKVQEVVST 398
+ TLTR+KFE L ++L++R + P ++ L+DA +S KD+DEV+LVGG TR+P VQE+V
Sbjct: 185 IETTLTRAKFEELCSDLLDRLRTPVENSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKK 364
Query: 399 IFGKSP 404
+ GK P
Sbjct: 365 MTGKDP 382
>AV766006
Length = 408
Score = 142 bits (358), Expect = 2e-34
Identities = 71/136 (52%), Positives = 98/136 (71%), Gaps = 1/136 (0%)
Frame = -1
Query: 447 LGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKMLGEFELVGLP 506
+GG+ +++I RNT IPT+K+Q F+T D QT V I+V +GER M DN+ LG+F+L G+P
Sbjct: 408 VGGVMSKIIERNTVIPTRKTQTFTTYQDKQTTVSIQVYEGERAMTKDNRQLGKFDLNGIP 229
Query: 507 PAPRGMPQIEVTFDIDANGIVTVSAKDKSTGKEQQITI-KSSGGLSDDEIQNMVKEAELH 565
A RG PQIEVTF++DANGI+ VSA+DK++ ++ ITI G LS +EI+ MVKEAE
Sbjct: 228 AAARGTPQIEVTFEVDANGILAVSAEDKASSAKEAITITNDKGRLSKEEIERMVKEAEEF 49
Query: 566 AQKDQERKSLIDIRNS 581
A D E K ++ +NS
Sbjct: 48 ADADAEVKRKVEGKNS 1
>AW720237
Length = 459
Score = 130 bits (326), Expect = 9e-31
Identities = 68/139 (48%), Positives = 89/139 (63%), Gaps = 4/139 (2%)
Frame = +3
Query: 55 IGIDLGTTNSCVSVMEGKNPKVVENSEGARTTPSVVAFTQKGELLVGTPAKRQAVTNPEN 114
IGIDLGTT SCV V +++ N +G RTTPS V FT+ E L+G AK Q NP N
Sbjct: 45 IGIDLGTTYSCVGVWMNDRVEIIANDQGNRTTPSYVGFTES-ERLIGDAAKNQVARNPIN 221
Query: 115 TISGAKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEAK----GQQYSPSQIGAFVL 170
T+ AKRLIGR+FDDP QK++K+ P+K+ P+G + K +++ Q+ + VL
Sbjct: 222 TVFDAKRLIGRKFDDPIVQKDIKLWPFKVEAGPDGKPLIAVKYKGETKKFHAEQVSSMVL 401
Query: 171 TKMKETAEAYLGKTVPKAV 189
TKMKETAEAYL KT+ V
Sbjct: 402 TKMKETAEAYLNKTIKDIV 458
>TC18168 homologue to UP|Q8GSN4 (Q8GSN4) Non-cell-autonomous heat shock
cognate protein 70, partial (23%)
Length = 508
Score = 124 bits (312), Expect = 4e-29
Identities = 68/142 (47%), Positives = 89/142 (61%), Gaps = 4/142 (2%)
Frame = +2
Query: 55 IGIDLGTTNSCVSVMEGKNPKVVENSEGARTTPSVVAFTQKGELLVGTPAKRQAVTNPEN 114
IGIDLGTT SCV V + +++ N +G RTTPS VAFT E L+G AK Q NP N
Sbjct: 86 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPIN 262
Query: 115 TISGAKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEA--KGQ--QYSPSQIGAFVL 170
T+ AKRLIGRR D Q +MK+ P+K+ P ++ KG+ Q++ +I + VL
Sbjct: 263 TVFDAKRLIGRRVSDASVQSDMKLWPFKVNSGPAEKPMIQVSYKGEDKQFAAEEISSMVL 442
Query: 171 TKMKETAEAYLGKTVPKAVITV 192
KM+E AEAYLG T+ AV+TV
Sbjct: 443 MKMREIAEAYLGSTIKNAVVTV 508
>AV769455
Length = 556
Score = 120 bits (300), Expect = 9e-28
Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 11/184 (5%)
Frame = +1
Query: 100 VGTPAKRQAVTNPENTISGAKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEAK--- 156
+GT + NP+N+IS KRLIGR+F DP+ Q+++K +P+ + + P+G + A+
Sbjct: 4 LGTAGASSTMMNPKNSISQLKRLIGRQFADPELQRDLKSLPFAVTEGPDGFPLIHARYLG 183
Query: 157 -GQQYSPSQIGAFVLTKMKETAEAYLGKTVPKAVITVPAYFNDAQRQATKDAGRIAGLEV 215
+ ++P+Q+ +L+ +KE A+ L V I +P YF D QR+A DA IAGL
Sbjct: 184 ETRTFTPTQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPIYFTDLQRRAVLDAATIAGLHP 363
Query: 216 LRIINEPTAAALSYGMNKEGL-------IAVFDLGGGTFDVSILEISNGVFEVKATNGDT 268
LR+ +E TA AL+YG+ K L +A D+G + V I G +V A + D
Sbjct: 364 LRLFHETTATALAYGIYKTDLPENDPLNVAFVDVGHASMQVCIAGYKKGQLKVLAHSYDR 543
Query: 269 FLGG 272
LGG
Sbjct: 544 SLGG 555
>BP064075
Length = 554
Score = 114 bits (285), Expect = 5e-26
Identities = 62/140 (44%), Positives = 89/140 (63%), Gaps = 5/140 (3%)
Frame = -2
Query: 342 TLTRSKFEALVNNLIERTKAPCQSCLKDANISTKDIDEVLLVGGMTRVPKVQEVVSTIFG 401
++TR+KFE L + ++ + C+ D+ + +I +V+LVGG +R+PKV++++ FG
Sbjct: 508 SITRAKFEELNKDYFQKCMELVEKCVIDSKMDKSNIHDVVLVGGSSRIPKVRQLLMDFFG 329
Query: 402 -KSPCKGVNPDEAVAMGAALQGGILRGD----VKELLLLDVTPLSLGIETLGGIFTRLIN 456
K C +NPDEAVA GAA+ IL G+ V+ LLL +VTPLSLG+E GGI +I
Sbjct: 328 RKDLCNRINPDEAVAHGAAVHASILSGEFSEKVQSLLLREVTPLSLGLEKHGGIMETIIP 149
Query: 457 RNTTIPTKKSQVFSTAADNQ 476
RNT IPT VF+T NQ
Sbjct: 148 RNTMIPTTMDHVFTTHFHNQ 89
>AW163930
Length = 359
Score = 111 bits (277), Expect = 4e-25
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 4/90 (4%)
Frame = +1
Query: 401 GKSPCKGVNPDEAVAMGAALQGGILRGD----VKELLLLDVTPLSLGIETLGGIFTRLIN 456
GK CK +NPDEAVA GAA+Q IL G+ V++LLLLDVTPLSLG+ET GG+ T LI
Sbjct: 49 GKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIP 228
Query: 457 RNTTIPTKKSQVFSTAADNQTQVGIKVLQG 486
RNTTIPTKK QVFST +DNQ V I+V +G
Sbjct: 229 RNTTIPTKKEQVFSTYSDNQPGVLIQVYEG 318
>TC12812 weakly similar to UP|Q8RVV9 (Q8RVV9) Heat shock protein 70
(Fragment), partial (48%)
Length = 746
Score = 95.1 bits (235), Expect = 3e-20
Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Frame = +1
Query: 474 DNQTQVGIKVLQGEREMASDNKMLGEFELVGLPPAPRGMPQIEVTFDIDANGIVTVSAKD 533
DNQT V IKV +GE A N LG+FEL G PAP+G +I V FD+DA+GIV VSA+D
Sbjct: 1 DNQTSVWIKVYEGEGAKADKNFFLGKFELSGFSPAPKGDTEINVCFDVDADGIVEVSAED 180
Query: 534 KSTGKEQQITIKSS-GGLSDDEIQNMVKEAELHAQKDQERKSLIDIRNSADTSIYSIEKS 592
S ++ ITI + G LS +E+ MV++A + +D+E + + +NS + Y
Sbjct: 181 MSLRLKKTITITNRLGRLSQEEMSRMVRDAAQYKAEDEEVRKKVKAKNSLENYAYEARDR 360
Query: 593 LSEYREKIPAEVAKEIE 609
+ + EK+ EV + ++
Sbjct: 361 VKKL-EKMVEEVIEWLD 408
>AW428869
Length = 181
Score = 79.0 bits (193), Expect = 2e-15
Identities = 35/53 (66%), Positives = 45/53 (84%)
Frame = +1
Query: 237 IAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKR 289
I VFDLGGGTFDVS+LE+ +GVFEV +T+GDT LGG+DFD ++D+L +FKR
Sbjct: 22 ILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAADFKR 180
>CB827219
Length = 544
Score = 72.4 bits (176), Expect = 2e-13
Identities = 46/168 (27%), Positives = 88/168 (52%)
Frame = +3
Query: 240 FDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRSESIDLSKDK 299
F++G G DV++ + GV ++KA G T +GGED ++ L+ + + K+
Sbjct: 51 FNMGAGYCDVAVTVTAGGVSQIKALAGST-IGGEDLLQNMMHHLLPDCENIFKNHGVKEI 227
Query: 300 LALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNNLIERT 359
++ LR A A LSS ++++ D +N + +FE + N+ E+
Sbjct: 228 KSMGLLRVATLDAIHRLSSQKSVQVDV-----DLGDGLKINKVIDCEEFEEVNKNVFEKC 392
Query: 360 KAPCQSCLKDANISTKDIDEVLLVGGMTRVPKVQEVVSTIFGKSPCKG 407
++ CL+D+ I +D+++V++VGG + +P+V+ +V+ I CKG
Sbjct: 393 ESLIIQCLQDSKIEVEDVNDVIIVGGCSYIPRVKNLVTNI-----CKG 521
>BP083571
Length = 423
Score = 69.3 bits (168), Expect = 2e-12
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +1
Query: 40 SLSRPFSSRAAGNDVIGIDLGTTNSCVSVMEGKNPK--VVENSEGARTTPSVVAFTQKGE 97
SL+ +++ G IGIDLGTT SCV+V + +N + ++ N +G RTTPS VAFT +
Sbjct: 130 SLAERMATKYEG-PAIGIDLGTTYSCVAVWQEQNDRAEIIHNEQGNRTTPSFVAFTDT-Q 303
Query: 98 LLVGTPAKRQAVTNPENTISG 118
L+G AK QA TNP NT+ G
Sbjct: 304 RLIGDAAKNQAATNPTNTVLG 366
>BP033771
Length = 513
Score = 63.9 bits (154), Expect = 8e-11
Identities = 35/125 (28%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Frame = -2
Query: 515 IEVTFDIDANGIVTVSAKDKSTGKEQQITIKSSGG-LSDDEIQNMVKEAELHAQKDQERK 573
+ V FD+DANGI+ VSA++++TG + IT+ + G LS ++I +++EAE H +D+ +
Sbjct: 509 LNVCFDLDANGILNVSAEEETTGIKNGITVTNDNGRLSSEQIMRLIQEAEKHRAEDRMYE 330
Query: 574 SLIDIRNSADTSIYSIEKSLSEY--REKIPAEVAKEIEDAVSDLRSAMAGDSADEIKSKL 631
++ N+ D +Y + ++ + K+ + +I AV+ R+ + E +
Sbjct: 329 KKVEAMNALDDYVYKLRNAIKDIDRSSKLRPQDKSKIRVAVTKARNLLGTSDQTETEVFE 150
Query: 632 DAANK 636
D N+
Sbjct: 149 DYLNE 135
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.312 0.131 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,117,910
Number of Sequences: 28460
Number of extensions: 86830
Number of successful extensions: 390
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of query: 673
length of database: 4,897,600
effective HSP length: 96
effective length of query: 577
effective length of database: 2,165,440
effective search space: 1249458880
effective search space used: 1249458880
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC148396.10