BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148395.15 - phase: 0
(730 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV767093 191 3e-49
CB828089 170 8e-43
CB829290 150 9e-37
BI420290 121 3e-28
AV416701 110 1e-24
AU089197 80 2e-21
BP033858 94 6e-20
AV776921 84 1e-16
AU089009 75 3e-14
TC11559 similar to UP|Q9SXT3 (Q9SXT3) Multidrug resistance prote... 67 8e-12
BP055390 67 1e-11
TC11425 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proeti... 62 2e-10
BG662257 60 9e-10
AV418106 57 1e-08
AV411197 56 2e-08
AV413975 52 3e-07
AV418183 49 4e-06
TC13598 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proeti... 47 1e-05
CB827630 41 6e-04
TC18135 homologue to UP|Q9MAY4 (Q9MAY4) ABC transporter homolog,... 39 0.004
>AV767093
Length = 603
Score = 191 bits (486), Expect = 3e-49
Identities = 96/201 (47%), Positives = 130/201 (63%)
Frame = +1
Query: 350 RAFNMVDRFFKNYLKLVDTDASLFFHSNVAMEWLVLRIEALLNLTVITAALLLILLPQRY 409
R F F + + V+ + FH+N A EWL R++ + + + + +I LP
Sbjct: 1 RGFRKQGEFCQENIDRVNASLRMDFHNNGANEWLGYRLDFTGVVFLCISTMFMIFLPSSI 180
Query: 410 LSPGRVGLSLSYALTLNGAQIFWTRWFSNLSNYIISVERIKQFIHIPAEPPAIVDNNRPP 469
+ P VGLSLSY L L+ F N+ N ++SVERIKQF ++P+E P + + PP
Sbjct: 181 VRPEYVGLSLSYGLALSSVLSFTISMTCNVENKMVSVERIKQFTNLPSEAPWKIPDLSPP 360
Query: 470 SSWPSKGKIDLQGLEVRYRPNAPLVLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLV 529
+WP+ G I+L L+VRYRPN PLVLKGI+ T +GG ++GVVGRTGSGKSTLI LFRL+
Sbjct: 361 QNWPNHGSIELNSLQVRYRPNTPLVLKGISLTVQGGEKIGVVGRTGSGKSTLIQVLFRLI 540
Query: 530 EPSRGDILIDGINICSMGLKD 550
EPS G I+IDGINIC++GL D
Sbjct: 541 EPSAGKIIIDGINICTLGLHD 603
>CB828089
Length = 511
Score = 170 bits (430), Expect = 8e-43
Identities = 85/127 (66%), Positives = 100/127 (77%), Gaps = 1/127 (0%)
Frame = +1
Query: 590 KCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSAT 649
KCQL+E + + LDSSV ++G NWS+GQRQLFCLGR LL+R+RILVLDEATASID+AT
Sbjct: 7 KCQLQEAVQEKEGGLDSSVVEDGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNAT 186
Query: 650 DAILQRIIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSS-FSK 708
D ILQ+ IR EF +CTVITVAHR+PTV+D V+ +S GKLVEYDEP LM S F K
Sbjct: 187 DLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLMKREGSLFGK 366
Query: 709 LVAEYWS 715
LV EYWS
Sbjct: 367 LVKEYWS 387
>CB829290
Length = 546
Score = 150 bits (378), Expect = 9e-37
Identities = 72/111 (64%), Positives = 96/111 (85%), Gaps = 1/111 (0%)
Frame = -3
Query: 604 LDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFEE 663
LDS+VS+ G NWS+GQRQL CLGRVLLK++++LVLDEATAS+D+ATD ++Q+ +RQ F E
Sbjct: 532 LDSTVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSE 353
Query: 664 CTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLM-DTNSSFSKLVAEY 713
TVIT+AHR+ +VIDSDMV++LS G + EYD P+KL+ D +SSF++LVAEY
Sbjct: 352 STVITIAHRITSVIDSDMVLLLSQGLIEEYDSPAKLLEDKSSSFAQLVAEY 200
>BI420290
Length = 398
Score = 121 bits (304), Expect = 3e-28
Identities = 59/133 (44%), Positives = 86/133 (64%), Gaps = 2/133 (1%)
Frame = +2
Query: 392 NLTVITAALLLILLPQRYLSPGRVGLSLSYALTLN--GAQIFWTRWFSNLSNYIISVERI 449
N + ++L+ LP+ ++P GL+++Y + LN A + W N N +ISVERI
Sbjct: 5 NFVFAFSLVMLVSLPEGIINPSIAGLAVTYGINLNVLQASVIWN--ICNAENKMISVERI 178
Query: 450 KQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEVRYRPNAPLVLKGITCTFKGGSRVG 509
Q+ HI +E P ++++ +PPS+WP G I + L++RY + P VLK ITCTF G ++G
Sbjct: 179 LQYTHIASEAPLVIEDCKPPSNWPETGTICFKNLQIRYAEHLPSVLKNITCTFPGRKKIG 358
Query: 510 VVGRTGSGKSTLI 522
VVGRTGSGKSTLI
Sbjct: 359 VVGRTGSGKSTLI 397
>AV416701
Length = 406
Score = 110 bits (274), Expect = 1e-24
Identities = 55/130 (42%), Positives = 77/130 (58%)
Frame = +2
Query: 373 FFHSNVAMEWLVLRIEALLNLTVITAALLLILLPQRYLSPGRVGLSLSYALTLNGAQIFW 432
FF S A+EWL LR+E L +LL+ P+ + P GL+ +Y L LN
Sbjct: 17 FFCSIAAIEWLCLRMELLSTFVFSFCMVLLVSFPRGNIDPSMAGLAATYGLNLNSRLSRR 196
Query: 433 TRWFSNLSNYIISVERIKQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEVRYRPNAP 492
F L N IIS+ERI Q+ +P+E P+++++ RP S+WP G I L L+VRY+ N P
Sbjct: 197 ILSFCKLENKIISIERIYQYSQVPSEAPSVIEDFRPTSTWPENGTIQLIDLKVRYKENLP 376
Query: 493 LVLKGITCTF 502
LVL G++CTF
Sbjct: 377 LVLHGVSCTF 406
>AU089197
Length = 658
Score = 79.7 bits (195), Expect(2) = 2e-21
Identities = 45/99 (45%), Positives = 59/99 (59%)
Frame = +1
Query: 451 QFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEVRYRPNAPLVLKGITCTFKGGSRVGV 510
QF IP+E P + P G I+L L+V+Y P AP+VLK +T F G ++G+
Sbjct: 289 QFSSIPSEAPL----K*V*TXLPRDGMIELHKLQVQYDPAAPIVLKDVTFIFSGQKKIGI 456
Query: 511 VGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLK 549
RTGSGKSTL+ ALF +V P G ILIDG+ I + K
Sbjct: 457 XXRTGSGKSTLLQALF*IVXPLSGCILIDGVXIPRLACK 573
Score = 40.4 bits (93), Expect(2) = 2e-21
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +3
Query: 546 MGLKDLRMKLSIIPQEPTLFKGSIRTNL 573
+GL+DLR K+ IIPQ+PTLF ++RT+L
Sbjct: 561 IGLQDLRTKIGIIPQDPTLFLXTVRTDL 644
>BP033858
Length = 533
Score = 94.4 bits (233), Expect = 6e-20
Identities = 43/80 (53%), Positives = 60/80 (74%)
Frame = -1
Query: 634 RILVLDEATASIDSATDAILQRIIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGKLVEY 693
R+L +DEATAS+DS TDA++QRIIR++F T+I++AHR+PTV+D D V+V+ G+ E+
Sbjct: 533 RLLFMDEATASVDSQTDAVIQRIIREDFAARTIISIAHRIPTVMDCDRVLVVDAGRAKEF 354
Query: 694 DEPSKLMDTNSSFSKLVAEY 713
D PS L+ S F LV EY
Sbjct: 353 DRPSNLLQRQSLFGALVQEY 294
>AV776921
Length = 435
Score = 83.6 bits (205), Expect = 1e-16
Identities = 51/133 (38%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Frame = +2
Query: 494 VLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRM 553
+L + G V +VG +GSGKST+IS + R EP GDIL+DG +I + LK LR
Sbjct: 41 ILNKLCLDIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGDILLDGNDIRDLDLKWLRQ 220
Query: 554 KLSIIPQEPTLFKGSIRTNLDPLGLYSDD-----EIWKAVEKCQLKETISKLPSLLDSSV 608
++ ++ QEP LF SI+ N+ LY D E+ +AV+ + I+ LP L++ V
Sbjct: 221 QIGLVNQEPALFATSIKENI----LYGKDNATLEELKRAVKLSDAQSFINNLPERLETQV 388
Query: 609 SDEGGNWSLGQRQ 621
+ G S GQ+Q
Sbjct: 389 GERGIQLSGGQKQ 427
>AU089009
Length = 209
Score = 75.5 bits (184), Expect = 3e-14
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +1
Query: 1 MSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRDKTV 53
+SGGQKQR+QLARA+Y +AD+YLLDDP AVDAHTA+ LFN+ + L KTV
Sbjct: 49 LSGGQKQRVQLARALYQNADVYLLDDPXXAVDAHTASNLFNEYIXEXLXGKTV 207
>TC11559 similar to UP|Q9SXT3 (Q9SXT3) Multidrug resistance protein
(Fragment), partial (41%)
Length = 460
Score = 67.4 bits (163), Expect = 8e-12
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +3
Query: 494 VLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRM 553
+LKGI G VGV+G +GSGKSTL+ AL RL EP + +D +IC + + LR
Sbjct: 135 ILKGIHLDIPKGVIVGVIGPSGSGKSTLLRALNRLWEPPSASVFLDARDICHLDVLSLRR 314
Query: 554 KLSIIPQEPTLFKGSIRTNL 573
K+ ++ Q P LF+G++ N+
Sbjct: 315 KVGMLFQLPALFEGTVADNV 374
>BP055390
Length = 488
Score = 66.6 bits (161), Expect = 1e-11
Identities = 34/99 (34%), Positives = 63/99 (63%)
Frame = +3
Query: 594 KETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAIL 653
K++++ +LL + V G S GQ+Q + R +LK IL+LDEAT+++D+ ++ ++
Sbjct: 171 KDSVN*CSNLL-TQVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDTESEKLV 347
Query: 654 QRIIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGKLVE 692
Q + TVI +AHR+ TV+++D++ V+ G++VE
Sbjct: 348 QEALETAMHGRTVILIAHRLSTVVNADVIAVVENGQVVE 464
Score = 61.6 bits (148), Expect = 4e-10
Identities = 33/87 (37%), Positives = 55/87 (62%), Gaps = 3/87 (3%)
Frame = +3
Query: 1 MSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRDKTVILVTHQV 60
+SGGQKQRI +ARA+ + I LLD+ SA+D + L + + TA+ +TVIL+ H++
Sbjct: 231 LSGGQKQRIAIARAILKNPPILLLDEATSALDTESEK-LVQEALETAMHGRTVILIAHRL 407
Query: 61 EFLSEVDTIL---DGKVIQSGSYENLL 84
+ D I +G+V+++G++ LL
Sbjct: 408 STVVNADVIAVVENGQVVETGTHHTLL 488
>TC11425 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proetin, partial
(9%)
Length = 712
Score = 62.4 bits (150), Expect = 2e-10
Identities = 31/102 (30%), Positives = 59/102 (57%)
Frame = +2
Query: 605 DSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFEEC 664
D+ V + G S GQ+Q + R ++K IL+LDEAT+++D+ ++ ++Q + +
Sbjct: 77 DTVVGERGTLLSGGQKQRVAIARAIIKTPNILLLDEATSALDAESERVVQDALDKVMVNR 256
Query: 665 TVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSF 706
T + VAHR+ T+ ++D++ VL G +VE L++ +
Sbjct: 257 TTVIVAHRLSTIKNADVITVLKNGVIVEKGRHETLINIKDGY 382
Score = 57.4 bits (137), Expect = 8e-09
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +2
Query: 1 MSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRDKTVILVTHQV 60
+SGGQKQR+ +ARA+ +I LLD+ SA+DA + ++ D + + ++T ++V H++
Sbjct: 107 LSGGQKQRVAIARAIIKTPNILLLDEATSALDAESERVV-QDALDKVMVNRTTVIVAHRL 283
Query: 61 EFLSEVDTIL---DGKVIQSGSYENLL 84
+ D I +G +++ G +E L+
Sbjct: 284 STIKNADVITVLKNGVIVEKGRHETLI 364
>BG662257
Length = 336
Score = 60.5 bits (145), Expect = 9e-10
Identities = 34/101 (33%), Positives = 58/101 (56%)
Frame = +1
Query: 580 SDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLD 639
++ EI A E + IS L D+ V D G S GQ+Q + R ++K +IL+LD
Sbjct: 34 TEAEIIAAAELANAHKFISSLQQGYDTVVGDRGIQLSGGQKQRVAIARAIVKSPKILLLD 213
Query: 640 EATASIDSATDAILQRIIRQEFEECTVITVAHRVPTVIDSD 680
EAT+++D+ ++ ++Q + + + T I VAHR+ T+ +D
Sbjct: 214 EATSALDAESEKVVQDALDRVRVDRTTIVVAHRLSTIKGAD 336
Score = 48.9 bits (115), Expect = 3e-06
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +1
Query: 1 MSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRDKTVILVTHQV 60
+SGGQKQR+ +ARA+ I LLD+ SA+DA + ++ D + D+T I+V H++
Sbjct: 139 LSGGQKQRVAIARAIVKSPKILLLDEATSALDAESEKVV-QDALDRVRVDRTTIVVAHRL 315
Query: 61 EFLSEVD 67
+ D
Sbjct: 316 STIKGAD 336
>AV418106
Length = 419
Score = 57.0 bits (136), Expect = 1e-08
Identities = 23/55 (41%), Positives = 40/55 (71%)
Frame = -2
Query: 659 QEFEECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEY 713
++F + T++++AHR+PTV+D D V+V+ G E+D+PS+L++ + F LV EY
Sbjct: 418 EDFADRTIVSIAHRIPTVMDCDRVLVIDAGFAKEFDKPSRLLERPALFGALVKEY 254
>AV411197
Length = 391
Score = 56.2 bits (134), Expect = 2e-08
Identities = 36/106 (33%), Positives = 58/106 (53%), Gaps = 5/106 (4%)
Frame = +3
Query: 557 IIPQEPTLFKGSIRTNLDPLGLY-----SDDEIWKAVEKCQLKETISKLPSLLDSSVSDE 611
+I QEP +F +IR N+ +Y S+ E+ +A IS LP D+ V
Sbjct: 54 LIQQEPIIFSTTIRENI----IYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMR 221
Query: 612 GGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRII 657
G + + GQ+Q + RV+LK IL+LDEA++SI+S + ++Q +
Sbjct: 222 GVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVIQEAL 359
Score = 35.8 bits (81), Expect = 0.025
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +3
Query: 1 MSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAIL 39
++ GQKQRI +AR V +A I LLD+ S++++ ++ ++
Sbjct: 231 LTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVI 347
>AV413975
Length = 343
Score = 52.4 bits (124), Expect = 3e-07
Identities = 27/68 (39%), Positives = 45/68 (65%), Gaps = 2/68 (2%)
Frame = +2
Query: 476 GKIDLQGLEVRY--RPNAPLVLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSR 533
G+++L + Y RP+ P VLKGIT GS+V +VG +G GK+T+ + + R +P++
Sbjct: 143 GEVELDDVWFSYPSRPSHP-VLKGITMKLHPGSKVALVGPSGGGKTTIANLIERFYDPTK 319
Query: 534 GDILIDGI 541
G IL++G+
Sbjct: 320 GKILLNGV 343
>AV418183
Length = 298
Score = 48.5 bits (114), Expect = 4e-06
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +3
Query: 540 GINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNL--DPLGLYSDDEIWKAVEKCQLKETI 597
G+ + + + L K+SI+ QEPTLF SI N+ G + +I A + E I
Sbjct: 3 GVPLAEISHRHLHRKISIVSQEPTLFNCSIEENIAYGFDGKLNSVDIENAAKMANAHEFI 182
Query: 598 SKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRI 635
SK P + V + G S GQ+Q + R LL +I
Sbjct: 183 SKFPEKYQTFVGERGVRLSGGQKQRIAIARALLMDPKI 296
Score = 28.5 bits (62), Expect = 4.0
Identities = 13/21 (61%), Positives = 16/21 (75%)
Frame = +3
Query: 1 MSGGQKQRIQLARAVYNDADI 21
+SGGQKQRI +ARA+ D I
Sbjct: 234 LSGGQKQRIAIARALLMDPKI 296
>TC13598 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proetin, partial
(7%)
Length = 552
Score = 46.6 bits (109), Expect = 1e-05
Identities = 22/77 (28%), Positives = 43/77 (55%)
Frame = +3
Query: 630 LKRNRILVLDEATASIDSATDAILQRIIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGK 689
+K IL+LDE T+++D ++ ++Q + + T + VAHR+ T+ +D+++VL G
Sbjct: 3 IKSPNILLLDEXTSALDVESERVVQDALDKVMVNRTTVIVAHRLSTIKSADVIIVLKNGV 182
Query: 690 LVEYDEPSKLMDTNSSF 706
+VE L+ +
Sbjct: 183 IVEKGRHETLISIKDGY 233
>CB827630
Length = 405
Score = 41.2 bits (95), Expect = 6e-04
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +2
Query: 2 SGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRDKTVILVTHQVE 61
SGG K+R+ +A ++ D + +D+P + +D + L+N V A RD+ +IL TH +E
Sbjct: 140 SGGMKRRLIVAISLIGDPRVVYMDEPSTGLDPASRKSLWN-VVKLAKRDRAIILTTHSME 316
>TC18135 homologue to UP|Q9MAY4 (Q9MAY4) ABC transporter homolog, partial
(50%)
Length = 968
Score = 38.5 bits (88), Expect = 0.004
Identities = 22/67 (32%), Positives = 40/67 (58%)
Frame = +3
Query: 2 SGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRDKTVILVTHQVE 61
SGG + RI LARA++ + I LLD+P + +D A + + + D+ +++++H +
Sbjct: 735 SGGWRMRIALARALFINPTILLLDEPTNHLDLE-ACVWLEESLKNF--DRIMVVISHSQD 905
Query: 62 FLSEVDT 68
FL+ V T
Sbjct: 906 FLNGVCT 926
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.321 0.136 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,769,766
Number of Sequences: 28460
Number of extensions: 156507
Number of successful extensions: 919
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of query: 730
length of database: 4,897,600
effective HSP length: 97
effective length of query: 633
effective length of database: 2,136,980
effective search space: 1352708340
effective search space used: 1352708340
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Medicago: description of AC148395.15