BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148359.9 + phase: 0
(877 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP063299 242 5e-64
BP084079 164 4e-41
TC12199 163 1e-40
BP057998 154 8e-38
BI417698 144 5e-35
BP057316 139 1e-33
BP075523 80 7e-26
TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fr... 103 1e-22
BP055604 99 2e-21
BP056393 96 3e-20
AV777489 89 4e-18
BI418116 83 2e-16
TC14723 62 4e-10
TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance ... 62 5e-10
AV411169 61 9e-10
BP085988 59 3e-09
TC17265 59 4e-09
AV410283 57 2e-08
BP054702 55 5e-08
BP067300 55 6e-08
>BP063299
Length = 580
Score = 242 bits (617), Expect(2) = 5e-64
Identities = 116/165 (70%), Positives = 137/165 (82%), Gaps = 1/165 (0%)
Frame = +3
Query: 292 SILVSTRDKDVATIMGTCQAHSLSGLSDSDCWLLFKQHAFRHYREEHTKLVEIGKEIVKK 351
S+LVSTRD DVA IMGTCQA L GLS++DCWLLFKQ+AF EE +LV IGKEIVKK
Sbjct: 51 SVLVSTRDMDVAEIMGTCQAQRLQGLSENDCWLLFKQYAFGANNEERAELVAIGKEIVKK 230
Query: 352 CNGLPLAAKALGGLMFSMNEEKEWLDIKDSELWDLPQEKSILPALRLSYFYLTPTLKQCF 411
C GLPLAA+ALGGL+ NE KEW ++K+S LW+LP E+ ILPAL LSYF+LTPTL+QCF
Sbjct: 231 CGGLPLAARALGGLLRLKNEVKEWHEVKESTLWNLPDERCILPALMLSYFHLTPTLRQCF 410
Query: 412 SFCAIFPKDREILKEELIQLWMANGFIAK-RNLEVEDVGNMVWKE 455
+FCAIFPKD +I+KE+LI LWMANGFI+ +N EVEDVGN +WKE
Sbjct: 411 AFCAIFPKDAKIIKEDLIYLWMANGFISSTKNKEVEDVGNSIWKE 545
Score = 20.8 bits (42), Expect(2) = 5e-64
Identities = 7/9 (77%), Positives = 9/9 (99%)
Frame = +2
Query: 456 LYQKSFFQD 464
+Y+KSFFQD
Sbjct: 545 MYRKSFFQD 571
>BP084079
Length = 508
Score = 164 bits (416), Expect = 4e-41
Identities = 95/162 (58%), Positives = 112/162 (68%), Gaps = 5/162 (3%)
Frame = +3
Query: 1 MADPFLGVVFENLMSLLQIEFSTIYGIKSKAENLSTTLVDIRAVLEDAEKRQVTDNFIKV 60
M + LGVVFENL+SL+Q EF+TI GIK KAE LS L I+ VLEDAEK+Q+TD + V
Sbjct: 27 MTEALLGVVFENLLSLVQNEFATISGIKGKAEKLSHDLDLIKGVLEDAEKKQLTDRAVMV 206
Query: 61 WLQDLKDVVYVLDDILDECSIKSSRLKKFTSLK-----FRHKIGNRLKEITGRLDRIAER 115
WLQ LKD VYVLDDILDECSI+S RL +S K FR +IGNRLK+IT R + IAER
Sbjct: 207 WLQQLKDAVYVLDDILDECSIESLRLGGLSSFKPKSIIFRREIGNRLKDITRRFEEIAER 386
Query: 116 KNKFSLQTGGTLRESPYQVAEGRQTSSTPLETKALGRDDDKE 157
K F L+ RE +VAE R+TSS + K GR DDKE
Sbjct: 387 KKNFILR--DVDRERQAEVAEWRETSSIIPQPKVYGRQDDKE 506
>TC12199
Length = 551
Score = 163 bits (412), Expect = 1e-40
Identities = 94/164 (57%), Positives = 112/164 (67%), Gaps = 6/164 (3%)
Frame = +2
Query: 1 MADPFLGVVFENLMSLLQIEFSTIYGIKSKAENLSTTLVDIRAVLEDAEKRQVTDNFIKV 60
MA+ LGVVFENL SL+Q EF+TI GIK KAE LS L I+AV+EDAEK+Q+T+ IKV
Sbjct: 65 MAEALLGVVFENLASLVQNEFATISGIKEKAEKLSQKLQVIKAVVEDAEKKQITNQSIKV 244
Query: 61 WLQDLKDVVYVLDDILDECSIKSSRLKKFTSL------KFRHKIGNRLKEITGRLDRIAE 114
WLQ LKD YVLDDILDECS +S RL ++L FR KIG +LKEIT R D IAE
Sbjct: 245 WLQQLKDAAYVLDDILDECSTESHRLAGLSTLIKPKNIMFRRKIGKKLKEITRRFDEIAE 424
Query: 115 RKNKFSLQTGGTLRESPYQVAEGRQTSSTPLETKALGRDDDKEK 158
KNKF LQ R +V EGR+T +T E + GR ++KEK
Sbjct: 425 GKNKFILQESDGGRRD--EVPEGRETWATIHEPELYGRQEEKEK 550
>BP057998
Length = 566
Score = 154 bits (388), Expect = 8e-38
Identities = 79/181 (43%), Positives = 118/181 (64%), Gaps = 5/181 (2%)
Frame = +2
Query: 275 DRWNRLKSVLSCGSKGSSILVSTRDKDVATIMGTCQAHSLSGLSDSDCWLLFKQHA--FR 332
DRWN+LK G +GS ILV+TR +VA+++ T Q +LS LS+ DCW +F HA F
Sbjct: 20 DRWNQLKKPFQHGMRGSKILVTTRSDEVASVVQTGQTFNLSQLSNEDCWSVFANHACLFP 199
Query: 333 HYREEHTKLVEIGKEIVKKCNGLPLAAKALGGLMFSMNEEKEWLDIKDSELWDLPQ-EKS 391
E L +IG EIVKKC GLPLAA++LGGL+ + K+W ++ + ++W+L + E
Sbjct: 200 GLGENTIALEKIGLEIVKKCKGLPLAAQSLGGLLRRKHNIKDWNNVLNCDIWELSESESK 379
Query: 392 ILPALRLSYFYLTPTLKQCFSFCAIFPKDREILKEELIQLWMANGFI--AKRNLEVEDVG 449
I+P+LR+SY YL LK+CF++ +++PKD E K ++I LWMA + K+ + +VG
Sbjct: 380 IIPSLRISYHYLPSYLKRCFAYFSLYPKDYEFEKNDVILLWMAEDLLPPPKQGKTLNEVG 559
Query: 450 N 450
+
Sbjct: 560 D 562
>BI417698
Length = 519
Score = 144 bits (364), Expect = 5e-35
Identities = 80/127 (62%), Positives = 93/127 (72%), Gaps = 5/127 (3%)
Frame = +2
Query: 1 MADPFLGVVFENLMSLLQIEFSTIYGIKSKAENLSTTLVDIRAVLEDAEKRQVTDNFIKV 60
MAD LG VF+ L+SL Q E +TI GIK KA+ LS L I+AV+EDAE++Q+TD IKV
Sbjct: 89 MADALLGAVFDKLLSLAQNELATISGIKGKAQKLSRNLELIKAVVEDAEEKQITDKPIKV 268
Query: 61 WLQDLKDVVYVLDDILDECSIKSSRLKKFTSL-----KFRHKIGNRLKEITGRLDRIAER 115
WLQ LKD VYVLDDILDECSI+S RL +SL KFR++IGNRLKEIT R D IAE
Sbjct: 269 WLQHLKDAVYVLDDILDECSIESLRLAGLSSLKPKNIKFRYQIGNRLKEITSRFDEIAEG 448
Query: 116 KNKFSLQ 122
K K LQ
Sbjct: 449 KAKLLLQ 469
>BP057316
Length = 494
Score = 139 bits (351), Expect = 1e-33
Identities = 69/171 (40%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Frame = +2
Query: 249 LQGKIYLLILDDVWNQNEQLEYGLTQDRWNRLKSVLSCGSKGSSILVSTRDKDVATIMGT 308
L GK YLL+LDD WN++ Q +W +L+ L CG++GS +LV+TR + VA MG
Sbjct: 5 LSGKKYLLVLDDTWNESYQ--------KWTQLRKYLMCGAQGSKVLVTTRSQIVAQTMGV 160
Query: 309 CQAHSLSGLSDSDCWLLFKQHAFRHYREEHTKLVE-IGKEIVKKCNGLPLAAKALGGLMF 367
H L+ L+ + W L K+ F + ++ +E IG++I +KC G+PLA + LGGL+
Sbjct: 161 QVIHVLNSLTLEESWGLLKKITFEDDATQVSQSLESIGEKIAEKCRGVPLAIRTLGGLLQ 340
Query: 368 SMNEEKEWLDIKDSELWDL-PQEKSILPALRLSYFYLTPTLKQCFSFCAIF 417
S +EE EW+++ + W L E SI+P L+LSY L+P ++QCF++C+++
Sbjct: 341 SKSEESEWMNVLQGDFWKLCEDEDSIIPVLKLSYQNLSPQIRQCFAYCSLY 493
>BP075523
Length = 466
Score = 79.7 bits (195), Expect(2) = 7e-26
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = +1
Query: 20 EFSTIYGIKSKAENLSTTLVDIRAVLEDAEKRQVTDNFIKVWLQDLKDVVYVLDDIL 76
EF+TI GIK KAE LS TL I+AV+EDAEK+++T+ IKVWLQ LKD VYVLDDIL
Sbjct: 85 EFATISGIKGKAEKLSHTLELIKAVVEDAEKKEITNKSIKVWLQQLKDAVYVLDDIL 255
Score = 55.5 bits (132), Expect(2) = 7e-26
Identities = 29/52 (55%), Positives = 39/52 (74%)
Frame = +3
Query: 91 SLKFRHKIGNRLKEITGRLDRIAERKNKFSLQTGGTLRESPYQVAEGRQTSS 142
++KFR++IGN+LKE+ R D IA+ KNK +LQ G +RE +VAE RQTSS
Sbjct: 315 NIKFRYEIGNKLKEMARRFDEIADCKNKLALQEG--VRERSTEVAEWRQTSS 464
Score = 27.7 bits (60), Expect = 8.3
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 1 MADPFLGVVFENLMSLL-QIEFSTIYGIKSKAENLSTTLVDIRAVLEDAEKRQVTDNFIK 59
MA+ LG FE L+SL ++ + + + T L R +L+ +++ N +
Sbjct: 26 MAEALLGAGFEKLISLAREVNLQPSLESRERLRSYHTLLN*SRLLLKMLRRKR*QTNL*R 205
Query: 60 VWLQDLKDVVYVLDDILDECSIKSSRLKKFTSLK 93
K + LDECSI+S RL+ K
Sbjct: 206 FGCSSSKMLSTS*MISLDECSIESLRLQGIVLFK 307
>TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fragment),
complete
Length = 880
Score = 103 bits (257), Expect = 1e-22
Identities = 83/303 (27%), Positives = 144/303 (47%), Gaps = 18/303 (5%)
Frame = +3
Query: 91 SLKFRHKIGNRLKEITGRLDRIAERKNKFSLQTGGTLRESPYQVAEGR----QTSSTPL- 145
++K R++I + K I R+ I +F L+ T E+ + G Q L
Sbjct: 6 NMKARYRIAHEFKGINSRIRTIFNTHKRF-LRKLDTASEASSSNSSGNTWNDQRGDALLL 182
Query: 146 -ETKALGRDDDKEKIVEFLLTHAKDSDFISVYPIVGLGGIGKTTLVQLIYNDVRVSDNFD 204
T +G D K+K++ L+ K V + G+GG+GKTTLV+ +Y+D V +F
Sbjct: 183 DNTDLVGIDRRKKKLMGCLI---KPCPVRKVISVTGMGGMGKTTLVKQVYDDPVVIKHFR 353
Query: 205 KKIWVCVSETFSVKRILCSIIESITLE-------KCPDFELDVMERKVQGLLQGKIYLLI 257
W+ VS++ + +L + + E + D ++ ++ LLQ + YL++
Sbjct: 354 ACAWITVSQSCEIGELLRDLARQLFSEIRRPVPLGLENMRCDRLKMIIKDLLQRRRYLVV 533
Query: 258 LDDVWNQNEQLEYGLTQDRWNRLKSVLSCGSKGSSILVSTRDKDVATIMGT---CQAHSL 314
DDVW+ E W +K L + GS I+++TR D+A T + ++L
Sbjct: 534 FDDVWHVRE----------WEAVKYALPDNNCGSRIMITTRRSDLAFTSSTESKGKVYNL 683
Query: 315 SGLSDSDCWLLFKQHAFRHYREEHTKLVEIGKEIVKKCNGLPLAAKALGGLMFSMNEEK- 373
L + + W LF + F H + L+ I I++KC GLPLA A+ G++ + ++ +
Sbjct: 684 QPLKEDEAWELFCRKTF-HGDSCPSHLIGICTYILRKCEGLPLAIVAISGVLATKDKRRI 860
Query: 374 -EW 375
EW
Sbjct: 861 DEW 869
>BP055604
Length = 464
Score = 99.4 bits (246), Expect = 2e-21
Identities = 43/65 (66%), Positives = 51/65 (78%)
Frame = -3
Query: 812 WEGLQSLRTLEIWDCKGMRCLPEGIRHLTSLEFLRIWSCPTLEERCKEGTGEDWDKIAHI 871
WEGL SLR L IW C G+R LP+G +HL++LE L I CP L+ERCKEGTGEDWDKIAH+
Sbjct: 462 WEGLHSLRYLRIWGCPGLRSLPDGFQHLSALERLIIEGCPELKERCKEGTGEDWDKIAHV 283
Query: 872 PKIKI 876
P + I
Sbjct: 282 PDVYI 268
>BP056393
Length = 421
Score = 95.5 bits (236), Expect = 3e-20
Identities = 44/96 (45%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Frame = +1
Query: 344 IGKEIVKKCNGLPLAAKALGGLMFSMNEEKEWLDIKDSELWDLPQ-EKSILPALRLSYFY 402
IG++IVK+C G PL A++LGGL+ ++ ++ +I +S +W+LP+ E +I+ ALR+SY Y
Sbjct: 121 IGRQIVKRCKGSPLXAQSLGGLLRGKHDIRDXNNILNSNIWELPENESNIILALRISYHY 300
Query: 403 LTPTLKQCFSFCAIFPKDREILKEELIQLWMANGFI 438
L P LK+C +C++FPKD + +ELI LWMA +
Sbjct: 301 LPPHLKRCXVYCSLFPKDYKFDXDELILLWMAEDLL 408
>AV777489
Length = 451
Score = 88.6 bits (218), Expect = 4e-18
Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 20/150 (13%)
Frame = +1
Query: 13 LMSLLQIEFSTIYGIKSKAENLSTTLVDIRAVLEDAEKRQVTDNFIKVWLQDLKDVVYVL 72
L SL+Q E G + LS+TL I+A LEDAE++Q TD IKVWLQ L+D +VL
Sbjct: 7 LSSLIQKELGQFLGFDEELTRLSSTLTAIKATLEDAEEKQFTDRAIKVWLQKLRDAAHVL 186
Query: 73 DDILDECS------------------IKSSRLKKF--TSLKFRHKIGNRLKEITGRLDRI 112
DDILDEC+ ++SS L F + FR I ++K I RLD +
Sbjct: 187 DDILDECATEALKMENGGFMCGLSDKVQSSCLFSFHPKHVVFRCTIAKKMKMIRERLDEV 366
Query: 113 AERKNKFSLQTGGTLRESPYQVAEGRQTSS 142
A+ + +F L T + A+ RQT+S
Sbjct: 367 AQERTRFHLTEMATQKR-----ADWRQTTS 441
>BI418116
Length = 584
Score = 82.8 bits (203), Expect = 2e-16
Identities = 55/173 (31%), Positives = 86/173 (48%), Gaps = 16/173 (9%)
Frame = +2
Query: 8 VVFENLMSLLQIEFSTIYGIKSKAENLSTTLVDIRAVLEDAEKRQVTDNFIKVWLQDLKD 67
++ E L S EF I+ +K + + T+ I+AVL DAE + T++ WL++LKD
Sbjct: 53 LILEKLSSSAIKEFGIIWNLKDDLQRMKNTVSAIKAVLRDAEAKATTNHQTSNWLEELKD 232
Query: 68 VVYVLDDILDECSIKSSRLKKFTSLKFRH----------------KIGNRLKEITGRLDR 111
V+Y DD+LD+ S + + + KF K+G+ +K I RL
Sbjct: 233 VLYDADDLLDDLSTEDLKRQVMIGNKFVRKLQIFFSKSNQIAHGLKLGHNMKAIQKRLHD 412
Query: 112 IAERKNKFSLQTGGTLRESPYQVAEGRQTSSTPLETKALGRDDDKEKIVEFLL 164
IA NK +LQ E+P E RQT S + + +GR+D+K + +LL
Sbjct: 413 IA--NNKQALQLSDHPVETPTAYREQRQTYSFVSKDEVIGREDEKTLLTSYLL 565
>TC14723
Length = 705
Score = 62.0 bits (149), Expect = 4e-10
Identities = 27/39 (69%), Positives = 32/39 (81%)
Frame = +1
Query: 837 RHLTSLEFLRIWSCPTLEERCKEGTGEDWDKIAHIPKIK 875
+HLTSL+ LRI CPTL ERCKEGT D DKIAH+PK++
Sbjct: 1 QHLTSLQLLRIQDCPTLAERCKEGTEVDLDKIAHVPKVE 117
>TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance
protein-like, partial (18%)
Length = 688
Score = 61.6 bits (148), Expect = 5e-10
Identities = 66/246 (26%), Positives = 108/246 (43%), Gaps = 8/246 (3%)
Frame = +2
Query: 186 KTTLVQLIYNDVRVSDNFDKKI-WVCVSETFSVKRILCSIIESITLEKCPDFELDVMERK 244
KTTL + + D +V +F ++I ++ VS++ +V+ + I I + + V +
Sbjct: 2 KTTLAREVCRDDQVRCHFKERILFLTVSQSPNVEELRAKIFGHIMGNRGLNANYAVPQWM 181
Query: 245 VQGLLQGKIYLLI-LDDVWNQN--EQLEYGLTQDRWNRLKSVLSCGSKGSSILVSTRDKD 301
Q Q + +L+ LDDVW+ EQL + G LV +R K
Sbjct: 182 PQFECQSQSQILVVLDDVWSLPVLEQLVLRVP----------------GCKYLVVSRFKF 313
Query: 302 VATIMGTCQAHSLSGLSDSDCWLLFKQHAFRHYREEHTKLVEIGKEIVKKCNGLPLAAKA 361
T + + LS+ D LF HAF H + K++V +C LPLA K
Sbjct: 314 QRIFNDT---YDVELLSEGDALSLFCHHAFGHKSIPFGANQNLIKQVVAECGRLPLALKV 484
Query: 362 LGGLMFSMNEEKEWLDIKDSELWDLP----QEKSILPALRLSYFYLTPTLKQCFSFCAIF 417
+G + NE WL +K L E +++ + +S YL +K+CF F
Sbjct: 485 IGASLRDQNE-MFWLSVKTRLSQGLSIGESYEVNLIDRMAISTNYLPEKVKECFLDLCAF 661
Query: 418 PKDREI 423
P+D++I
Sbjct: 662 PEDKKI 679
>AV411169
Length = 424
Score = 60.8 bits (146), Expect = 9e-10
Identities = 25/36 (69%), Positives = 30/36 (82%)
Frame = +3
Query: 841 SLEFLRIWSCPTLEERCKEGTGEDWDKIAHIPKIKI 876
SL+ L I CP L ERCK+GTGEDWDKIAH+PK++I
Sbjct: 3 SLQLLSIALCPALAERCKDGTGEDWDKIAHVPKVQI 110
>BP085988
Length = 474
Score = 58.9 bits (141), Expect = 3e-09
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = -2
Query: 839 LTSLEFLRIWSCPTLEERCKEGTGEDWDKIAHIPKIKI 876
L++LE L I CP L+ERCKEGTGEDWDKIAH+P + I
Sbjct: 473 LSALERLIIEGCPELKERCKEGTGEDWDKIAHVPLVII 360
>TC17265
Length = 582
Score = 58.5 bits (140), Expect = 4e-09
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 7/162 (4%)
Frame = -2
Query: 1 MADPFLGVVFENLMSLLQIEFSTIYGIKSKAENLSTTLVDIRAVLEDAEKRQVTDNFIKV 60
M D + E L LL E ++G+ + + L T L ++ L DAE+RQ D IK
Sbjct: 488 MVDSVVNFAVERLGDLLIEEARLLHGVSDQVKKLQTELKRMQCFLRDAERRQDEDETIKN 309
Query: 61 WLQDLKDVVYVLDDILDECSIKSS------RLKKFTSLKFRHKIGNRLKEITGRLDRIAE 114
W+ +++ + Y +D+++ + K + F+ K HK+G + I R+ +
Sbjct: 308 WISEIRQLAYDAEDVIEIYATKVAGGLSFGAKNPFSKGKHLHKVGTEIVSINSRISDLTR 129
Query: 115 RKNKFSLQTGGTLRESPYQV-AEGRQTSSTPLETKALGRDDD 155
+ L E + E R + S +E +G D+D
Sbjct: 128 SLQTYGLTATRDNEERALEAKRELRWSYSHIVEEFVVGLDED 3
>AV410283
Length = 426
Score = 56.6 bits (135), Expect = 2e-08
Identities = 40/130 (30%), Positives = 63/130 (47%)
Frame = +1
Query: 245 VQGLLQGKIYLLILDDVWNQNEQLEYGLTQDRWNRLKSVLSCGSKGSSILVSTRDKDVAT 304
++ +LQG LLILDDV ++ +QL++ + W KGS ++++TR+ V
Sbjct: 70 IKRVLQGNKVLLILDDV-DEIQQLDFLMGNREWFH---------KGSRVVITTRNTQVLP 219
Query: 305 IMGTCQAHSLSGLSDSDCWLLFKQHAFRHYREEHTKLVEIGKEIVKKCNGLPLAAKALGG 364
+ + L S LF HA R ++ + K+IVKK GLPLA + +G
Sbjct: 220 ESYVDMFYEVRELELSAALALFCHHAMRR-KKPAEGFSNLSKQIVKKTGGLPLALEVIGS 396
Query: 365 LMFSMNEEKE 374
+F KE
Sbjct: 397 FLFDKRTSKE 426
>BP054702
Length = 528
Score = 55.1 bits (131), Expect = 5e-08
Identities = 42/118 (35%), Positives = 59/118 (49%), Gaps = 5/118 (4%)
Frame = -3
Query: 764 FKNLTSLQSLFVDNFPN---LKELPNEPFNP-ALTHLYIYNCNEIESLPEKMWEGLQSLR 819
F +LTSL L+V F + + L E P +L L +YN + ++ L + L SL
Sbjct: 487 FPHLTSLSHLYVFGFGDQDLMNTLLKERLLPTSLVFLGLYNFSSLKFLEGNGLQHLSSLH 308
Query: 820 TLEIWDCKGMRCLPEG-IRHLTSLEFLRIWSCPTLEERCKEGTGEDWDKIAHIPKIKI 876
L I C + LPE + H SL L + CP LE R + G+ W K++ IP IKI
Sbjct: 307 QLHIDKCPSLVSLPEDQLPH--SLAVLNLEKCPLLEARYRIRKGKHWSKVSRIPVIKI 140
>BP067300
Length = 523
Score = 54.7 bits (130), Expect = 6e-08
Identities = 31/70 (44%), Positives = 39/70 (55%)
Frame = -2
Query: 807 LPEKMWEGLQSLRTLEIWDCKGMRCLPEGIRHLTSLEFLRIWSCPTLEERCKEGTGEDWD 866
L E + L SL TL I C ++C+P + S+ L I P LEERC+ EDW
Sbjct: 516 LDEDSLQKLTSLETLGIACCPKLQCMPAKLP--CSISTLHIVRSPRLEERCRGRKSEDWP 343
Query: 867 KIAHIPKIKI 876
KIAHIP I+I
Sbjct: 342 KIAHIPMIRI 313
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.138 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,077,751
Number of Sequences: 28460
Number of extensions: 234777
Number of successful extensions: 1218
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of query: 877
length of database: 4,897,600
effective HSP length: 98
effective length of query: 779
effective length of database: 2,108,520
effective search space: 1642537080
effective search space used: 1642537080
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC148359.9