BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148289.13 - phase: 0
(2306 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG662087 138 1e-32
BI417841 67 2e-11
TC11573 similar to UP|Q9M6N4 (Q9M6N4) Pol protein integrase regi... 67 3e-11
TC16320 weakly similar to UP|Q84TE0 (Q84TE0) At5g51080, partial ... 56 6e-08
TC18698 55 9e-08
AV427422 55 9e-08
BP065719 54 2e-07
AV410603 52 1e-06
TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial ... 52 1e-06
TC15341 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich pro... 51 2e-06
TC18149 weakly similar to UP|Q91BL3 (Q91BL3) Essential structura... 50 3e-06
BF177840 49 1e-05
TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fra... 45 2e-04
TC19740 similar to UP|FKH_DROME (P14734) Fork head protein, part... 43 5e-04
AV408212 41 0.002
TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transc... 41 0.002
AU251673 41 0.002
AW719943 41 0.002
TC7888 similar to UP|Q40336 (Q40336) Proline-rich cell wall prot... 41 0.002
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 40 0.004
>BG662087
Length = 373
Score = 138 bits (347), Expect = 1e-32
Identities = 65/119 (54%), Positives = 85/119 (70%)
Frame = +1
Query: 1322 GKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFMDGFSGYNQIKMAPEDREK 1381
GK RM VDY DLNKA PKD +PLP ID LVD + +++ S MD +SGY+QIKM P D +K
Sbjct: 16 GKWRMWVDYTDLNKACPKDSYPLPSIDKLVDGASDNELLSLMDAYSGYHQIKMHPSDEDK 195
Query: 1382 TSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEIEVYVDDMIVKSVTEEDH 1440
T+F+T +CY+ +PFGL NAGATYQ M +F D + + +EVY+D+MIVKS +H
Sbjct: 196 TAFMTARVNYCYQTIPFGLKNAGATYQXLMDRVFXDXVGRNMEVYLDNMIVKSALRANH 372
>BI417841
Length = 617
Score = 67.4 bits (163), Expect = 2e-11
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Frame = +1
Query: 1734 LIFDGAV--NVYGNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRI 1791
L FDG+ N G GAVL G+ + + + TNN AEY I+G++ A +
Sbjct: 142 LEFDGSSKGNPGSAGAGAVLRAEDGSKVYLREGVG-NQTNNQAEYRGLILGLKHAHEQGY 318
Query: 1792 KNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADAL 1851
++I + GDS LV Q++G W+ + + + A+ L + F +++H+PR N AD
Sbjct: 319 QHINVKGDSQLVCKQVEGSWKARNPNIASLCNEAKELKSKFQSFDINHVPRQYNSEADVQ 498
Query: 1852 ATLSSMIKVNH 1862
A L + H
Sbjct: 499 ANLGVNLPAGH 531
>TC11573 similar to UP|Q9M6N4 (Q9M6N4) Pol protein integrase region
(Fragment), partial (10%)
Length = 572
Score = 67.0 bits (162), Expect = 3e-11
Identities = 37/96 (38%), Positives = 51/96 (52%), Gaps = 1/96 (1%)
Frame = +2
Query: 2088 DNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNI-KRIVQKMVVTYKDWHE 2146
+NG +K ++ CD I+ SS PQ NG EAANK I K I +++ W +
Sbjct: 8 ENGIQFTSKQTQDFCDGMGIQMRFSSVKHPQTNGQTEAANKVILKGIKRRLYEAEGRWID 187
Query: 2147 MLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVEV 2182
LP L Y T ++S TPF L YG + +LPVE+
Sbjct: 188 ELPIVLWSYNTMPQSSIKETPF*LTYGADTMLPVEI 295
>TC16320 weakly similar to UP|Q84TE0 (Q84TE0) At5g51080, partial (11%)
Length = 632
Score = 56.2 bits (134), Expect = 6e-08
Identities = 28/91 (30%), Positives = 47/91 (50%)
Frame = +2
Query: 1776 YEACIMGIEEAIDLRIKNIEIYGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKV 1835
Y I+G++ AI K+I++ GDS LV NQ++G W+ + + A+ L F
Sbjct: 2 YRGLILGLKHAIKEGYKHIQVKGDSMLVCNQVQGLWKIKNQNIASLCSEAKELKNKFLSF 181
Query: 1836 ELHHIPRDENQMADALATLSSMIKVNHHNDV 1866
+++HIPR+ N AD A ++ +V
Sbjct: 182 KINHIPREYNSEADVQANFGISLRAGQVEEV 274
>TC18698
Length = 808
Score = 55.5 bits (132), Expect = 9e-08
Identities = 30/62 (48%), Positives = 38/62 (60%)
Frame = -2
Query: 1379 REKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEIEVYVDDMIVKSVTEE 1438
++KT+ + Y+VMP GL N TYQR M +FH I K +EVYV+DMIVKS E
Sbjct: 807 KKKTTLKINRVNYYYQVMPLGLKNI*TTYQRLMDKIFHKQI*KNVEVYVEDMIVKSSQE* 628
Query: 1439 DH 1440
H
Sbjct: 627 FH 622
>AV427422
Length = 417
Score = 55.5 bits (132), Expect = 9e-08
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Frame = +1
Query: 2037 SNGHRFILVAIDYFTKWVEAASYAN-VTKQVVVKFIKNHIICRYGIPNRIITDNGTNLNN 2095
S G+ +LV +D +K+ + T +V+ ++ +G+P I++D +
Sbjct: 19 SKGYEAVLVVVDRLSKFSHFVPLKHPYTAKVIADIFVREVVRLHGVPLSIVSDRDPLFMS 198
Query: 2096 KMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVVTY-KDWHEMLPFALHG 2154
KEL + S+ Y P+ +G E N+ ++ ++ + K W +P+A +
Sbjct: 199 NFWKELFKMQGTKLKMSTAYHPESDGQTEVVNRCLETYLRCFIADQPKSWAHWVPWAEYW 378
Query: 2155 YRTSVRTSTGATP 2167
Y TS STG TP
Sbjct: 379 YNTSYHVSTGQTP 417
>BP065719
Length = 567
Score = 54.3 bits (129), Expect = 2e-07
Identities = 34/131 (25%), Positives = 60/131 (44%), Gaps = 2/131 (1%)
Frame = +3
Query: 210 QVPHKFKIPDFEKYKGSSCPE--EHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYT 267
++P +K+P F K+ G S EH+ Y A ++ + + YF SLT A W+T
Sbjct: 159 ELPRGWKVPKFTKFSGDSGESTVEHIARYQIEAGDLAINENLKMKYFPSSLTKNAFTWFT 338
Query: 268 NLDKTRIQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVS 327
L + T+ L F EQ+ + + DL ++ + E+ +Y R+R ++
Sbjct: 339 TLAPRSVHTWAQLERIFHEQF-FRGECKVSXKDLASVKRKPAESIDDYLNRFRMLKSRCF 515
Query: 328 PRIEEKEMTKL 338
+ E E+ L
Sbjct: 516 THVSEHELVVL 548
>AV410603
Length = 162
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/51 (50%), Positives = 33/51 (63%)
Frame = +1
Query: 1339 KDDFPLPHIDVLVDSTAKSKVFSFMDGFSGYNQIKMAPEDREKTSFITPWG 1389
KD FP+P +D L+D S+ FS +D SGY+QI + PEDR KT F T G
Sbjct: 10 KDSFPMPTVDELLDELRGSQFFSKLDLRSGYHQILVKPEDRHKTVFRTHHG 162
>TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial (7%)
Length = 841
Score = 52.0 bits (123), Expect = 1e-06
Identities = 42/114 (36%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Frame = +1
Query: 405 MVTHGGPQ----QTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQFPQNPSPQN 460
M H PQ Q P QH P HP Q + PQ+ PQ PQ+ Q Q P PQ+
Sbjct: 7 MQLHNEPQPLQYQPQPHLQH----QPQHHPHFQPHPQPQLQSQPQ-PQHIQQSQ-PQPQS 168
Query: 461 VQPQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPP 514
QPQ +QQ Q QP Q+ Q PQ FQ Q +Q P PP
Sbjct: 169 -QPQHIQQP------------QPQPQLQHIQQSQPQPQFQNQHFQYPGTYPPPP 291
Score = 32.3 bits (72), Expect = 0.86
Identities = 28/101 (27%), Positives = 37/101 (35%), Gaps = 4/101 (3%)
Frame = +1
Query: 451 QFPQNPSPQNVQPQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQ 510
Q P P QPQ Q Q P+ Q P+ Q Q PQ QQ Q Q
Sbjct: 10 QLHNEPQPLQYQPQPHLQHQPQHHPHFQ------PHPQPQLQSQPQPQHIQQSQPQPQSQ 171
Query: 511 PRPPRMPINPIP----VTYAELLPGLLKKNLVQTRTAPPIP 547
P+ + P P P + ++ P ++ T PP P
Sbjct: 172 PQHIQQP-QPQPQLQHIQQSQPQPQFQNQHFQYPGTYPPPP 291
>TC15341 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich protein,
partial (33%)
Length = 1002
Score = 50.8 bits (120), Expect = 2e-06
Identities = 43/122 (35%), Positives = 51/122 (41%), Gaps = 12/122 (9%)
Frame = +1
Query: 411 PQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQF--PQNPSPQNVQPQSVQQ 468
PQQ PAY + P + T Q+PQ +P Q+ PQ V PQ
Sbjct: 649 PQQ--PAYYIPSTPLPGN-----TQTVAQLPQNQYLPPDQQYRTPQMQDMSRVAPQPCTN 807
Query: 469 QNFQQQP--YQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQP--------RPPRMPI 518
+ P QQ P QQP QQ QQ QQ QQ P Q +P QP RPP P+
Sbjct: 808 XSGXSPPPPVQQYPQYQQPQQQQQQQQQQQQWPQQLPQQVQPTQPPSMQSPQIRPPSSPV 987
Query: 519 NP 520
P
Sbjct: 988 YP 993
Score = 45.8 bits (107), Expect = 7e-05
Identities = 38/115 (33%), Positives = 43/115 (37%), Gaps = 22/115 (19%)
Frame = +1
Query: 438 PQIPQYPQIPQYPQFPQNPSPQNVQPQSVQQQNFQQQPYQQQPYQQQ------------- 484
P + Q PQ P Y P P P N Q + QN P QQ Q
Sbjct: 631 PNVTQAPQQPAY-YIPSTPLPGNTQTVAQLPQNQYLPPDQQYRTPQMQDMSRVAPQPCTN 807
Query: 485 --------PYQQYP-YQQYPQQNFQQQPYQQRPQQPRPPRMPINPIPVTYAELLP 530
P QQYP YQQ QQ QQQ QQ PQQ P P + ++ P
Sbjct: 808 XSGXSPPPPVQQYPQYQQPQQQQQQQQQQQQWPQQLPQQVQPTQPPSMQSPQIRP 972
Score = 43.9 bits (102), Expect = 3e-04
Identities = 39/126 (30%), Positives = 52/126 (40%), Gaps = 2/126 (1%)
Frame = +1
Query: 382 TTPVSGTKKTGNHFPRKKEQEVGMVTHGGPQQTY--PAYQHIAAITPTSHPFQQTNNHPQ 439
+TP+ G +T P+ + + P Q Y P Q ++ + P Q N
Sbjct: 676 STPLPGNTQTVAQLPQNQ--------YLPPDQQYRTPQMQDMSRVAP-----QPCTNXSG 816
Query: 440 IPQYPQIPQYPQFPQNPSPQNVQPQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNF 499
P + QYPQ+ Q PQ Q Q QQQ + QQ QQ Q P Q P Q P +
Sbjct: 817 XSPPPPVQQYPQYQQ---PQQQQQQQQQQQQWPQQLPQQVQPTQPPSMQSP-QIRPPSSP 984
Query: 500 QQQPYQ 505
PYQ
Sbjct: 985 VYPPYQ 1002
>TC18149 weakly similar to UP|Q91BL3 (Q91BL3) Essential structural protein
pp78/81, partial (5%)
Length = 710
Score = 50.4 bits (119), Expect = 3e-06
Identities = 51/153 (33%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Frame = +3
Query: 412 QQTYPAYQHIAAITPTSHPFQQTNNHPQIPQY----PQIPQYPQFPQNPSPQNVQ----- 462
QQ +P+ ++ P P N PQ+P P P QF Q P Q
Sbjct: 66 QQQFPSPVNLPQSIPVVPP---PNAPPQLPPQQGLPPSFPPPNQFSQTQIPAVPQRDPYF 236
Query: 463 PQSVQQQNFQQQPYQQQPYQQQPYQQY---PYQQYPQQNFQQQPYQQRPQQPRPPRMPIN 519
P VQ Q Q YQQ P QP+ Q P+QQY QQ Q Q P Q +PP IN
Sbjct: 237 PPPVQSQETPNQQYQQ-PLAPQPHPQPGAPPHQQY-QQTPHPQYSQPAPPQHQPPIPSIN 410
Query: 520 PIPVTYAELLPGLLKKNLVQTRTAPPIPEKLPS 552
P P + L + + V ++T PP + PS
Sbjct: 411 P-PQLQSSLGHHVEEPPYVPSQTYPPNLRQPPS 506
Score = 33.5 bits (75), Expect = 0.38
Identities = 31/107 (28%), Positives = 37/107 (33%), Gaps = 5/107 (4%)
Frame = +3
Query: 413 QTYPAYQHIAAITPTSHPFQQTNNHPQI-----PQYPQIPQYPQFPQNPSPQNVQPQSVQ 467
Q P Q+ + P HP H Q PQY Q P PS Q QS
Sbjct: 255 QETPNQQYQQPLAPQPHPQPGAPPHQQYQQTPHPQYSQPAPPQHQPPIPSINPPQLQSSL 434
Query: 468 QQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPP 514
+ ++ PY P Q YP N +Q P Q P PP
Sbjct: 435 GHHVEEPPY------------VPSQTYP-PNLRQPPSQPPSGPPAPP 536
>BF177840
Length = 410
Score = 48.5 bits (114), Expect = 1e-05
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 2085 IITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVV-TYKD 2143
I++D T + + L + S+ PQ +G E NK + +++ ++ K
Sbjct: 17 IVSDRDTKFISHFWRTLWGKVGTKLLYSTTCHPQTDGQTEVVNKTLSTLLRSVLERNLKM 196
Query: 2144 WHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPVE-VEIPSLRVLMEAD-LSEAEWV 2201
W LP Y V ++T +PF +VYG + P++ + +P+ +L D ++AE+V
Sbjct: 197 WETWLPHIEFAYNRVVHSTTKHSPFEIVYGYNPLTPLDLLPMPNTYLLKHKDGKAKAEFV 376
Query: 2202 QNRYDQLNL 2210
+ ++++ L
Sbjct: 377 KRLHEKIKL 403
>TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fragment),
partial (6%)
Length = 806
Score = 44.7 bits (104), Expect = 2e-04
Identities = 33/78 (42%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Frame = +2
Query: 442 QYPQIPQYPQFPQNP-------SPQNVQPQSVQQQNFQQQPYQQQP--YQQQPYQQYPYQ 492
Q PQ+ Q Q Q P Q Q VQQQ Q QQ P QQQ Q P Q
Sbjct: 5 QLPQLQQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQ 184
Query: 493 QYPQQNFQQQPYQQRPQQ 510
Q PQ QQ +QQ PQQ
Sbjct: 185 QLPQ--LQQLQHQQLPQQ 232
Score = 42.4 bits (98), Expect = 8e-04
Identities = 29/64 (45%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 451 QFPQNPSPQNVQPQSVQQQNFQQQPYQQQPY-QQQPYQQYPYQQYPQQNFQQQPYQQRPQ 509
Q PQ Q +Q Q Q QQQ QQ P QQQ Q QQ PQ QQQ Q +PQ
Sbjct: 5 QLPQLQQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQ-QQQLSQLQPQ 181
Query: 510 QPRP 513
Q P
Sbjct: 182 QQLP 193
Score = 40.4 bits (93), Expect = 0.003
Identities = 26/61 (42%), Positives = 27/61 (43%), Gaps = 1/61 (1%)
Frame = +2
Query: 463 PQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQYPQ-QNFQQQPYQQRPQQPRPPRMPINPI 521
PQ QQQ QQQP Q QQQ QQ P Q Q QQQ Q QQ P +
Sbjct: 11 PQLQQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQQL 190
Query: 522 P 522
P
Sbjct: 191 P 193
Score = 40.0 bits (92), Expect = 0.004
Identities = 35/87 (40%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Frame = +2
Query: 432 QQTNNHPQIPQYPQIPQYPQ--FPQNPSPQNVQPQSVQQQNFQQQPYQQ-QPYQQQP-YQ 487
QQ Q PQ Q+ Q Q PQ Q Q Q Q QQQ Q QP QQ P Q
Sbjct: 23 QQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQQLPQLQ 202
Query: 488 QYPYQQYPQQNFQQ------QPYQQRP 508
Q +QQ PQQ Q Q Y Q P
Sbjct: 203 QLQHQQLPQQQQQMVGAGMGQAYVQGP 283
>TC19740 similar to UP|FKH_DROME (P14734) Fork head protein, partial (4%)
Length = 622
Score = 43.1 bits (100), Expect = 5e-04
Identities = 24/58 (41%), Positives = 29/58 (49%)
Frame = +3
Query: 463 PQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMPINP 520
P + Q Q Q Q +Q Q QQQ Q + +QQ P F + P PQQP PP M P
Sbjct: 105 PHNPQHQQHQHQQHQHQFQQQQQPQHFHHQQ-PGPEFHRGPPPPPPQQPHPPPMMRQP 275
>AV408212
Length = 362
Score = 41.2 bits (95), Expect = 0.002
Identities = 23/59 (38%), Positives = 29/59 (48%)
Frame = +3
Query: 454 QNPSPQNVQPQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPR 512
Q+P Q Q Q +Q Q Q + QQQ QQ QQ QQ+ QQQP Q+ + R
Sbjct: 12 QSPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQSRDR 188
Score = 37.7 bits (86), Expect = 0.020
Identities = 22/57 (38%), Positives = 27/57 (46%)
Frame = +3
Query: 459 QNVQPQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPR 515
Q+ Q QQQ+ Q Q Q + QQ QQ QQ QQQ QQ+PQ + R
Sbjct: 12 QSPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQSR 182
Score = 37.4 bits (85), Expect = 0.027
Identities = 23/59 (38%), Positives = 27/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 447 PQYPQFPQNPSPQNVQPQSVQQQN---FQQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQ 502
PQ Q Q++Q Q + Q QQQ QQQ QQQ QQ QQ PQ Q +
Sbjct: 6 PQQSPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQSR 182
Score = 33.1 bits (74), Expect = 0.50
Identities = 28/89 (31%), Positives = 38/89 (42%)
Frame = +3
Query: 462 QPQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMPINPI 521
QPQ Q QQQ + Q QQ Q++ Q QQ QQQ QQ+ QQ + +
Sbjct: 3 QPQQSPHQQQQQQQHMQM--QQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQ 176
Query: 522 PVTYAELLPGLLKKNLVQTRTAPPIPEKL 550
A LL G + + TA + K+
Sbjct: 177 SRDRAHLLNGSANGLVGNSGTANALATKM 263
Score = 30.4 bits (67), Expect = 3.3
Identities = 23/59 (38%), Positives = 27/59 (44%)
Frame = +3
Query: 430 PFQQTNNHPQIPQYPQIPQYPQFPQNPSPQNVQPQSVQQQNFQQQPYQQQPYQQQPYQQ 488
P Q + Q Q+ Q+ Q Q + Q Q QQQ QQQ QQQ QQQP Q
Sbjct: 6 PQQSPHQQQQQQQHMQMQQI--LLQRHAALQQQQQQQQQQ--QQQQQQQQSQQQQPQSQ 170
Score = 29.6 bits (65), Expect = 5.6
Identities = 21/52 (40%), Positives = 24/52 (45%)
Frame = +3
Query: 442 QYPQIPQYPQFPQNPSPQNVQPQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQ 493
Q Q Q+ Q Q ++ Q QQQ QQ QQQ QQQ QQ P Q
Sbjct: 24 QQQQQQQHMQMQQILLQRHAALQQQQQQ---QQQQQQQQQQQQSQQQQPQSQ 170
>TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transcription
factor PosF21 (AtbZIP59), partial (17%)
Length = 570
Score = 40.8 bits (94), Expect = 0.002
Identities = 30/80 (37%), Positives = 34/80 (42%)
Frame = +1
Query: 409 GGPQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQFPQNPSPQNVQPQSVQQ 468
GG QQ YP + H + FQQ HPQ Q Q + Q +Q Q QQ
Sbjct: 28 GGGQQFYP-HNHSMHTLLAAQQFQQLQIHPQKHQQHQ---------HQFQQPIQQQQQQQ 177
Query: 469 QNFQQQPYQQQPYQQQPYQQ 488
Q QQP QQ QQQ Q
Sbjct: 178 QQPIQQPQQQMQQQQQEQHQ 237
Score = 40.0 bits (92), Expect = 0.004
Identities = 23/52 (44%), Positives = 26/52 (49%), Gaps = 1/52 (1%)
Frame = +1
Query: 459 QNVQPQSVQQQNFQQQPYQ-QQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQ 509
Q Q + Q QQ +Q QQP QQQ QQ Q PQQ QQQ +Q Q
Sbjct: 85 QQFQQLQIHPQKHQQHQHQFQQPIQQQQQQQQQPIQQPQQQMQQQQQEQHQQ 240
Score = 30.0 bits (66), Expect = 4.3
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 452 FPQNPSPQNVQPQSVQQQNFQQQPYQQQPYQQQPYQ-QYPYQQYPQQNFQQQPYQQRPQQ 510
+P N S + + Q FQQ Q +QQ +Q Q P QQ QQQ QQ QQ
Sbjct: 46 YPHNHSMHTL----LAAQQFQQLQIHPQKHQQHQHQFQQPIQQ------QQQQQQQPIQQ 195
Query: 511 PR 512
P+
Sbjct: 196 PQ 201
>AU251673
Length = 413
Score = 40.8 bits (94), Expect = 0.002
Identities = 26/119 (21%), Positives = 53/119 (43%), Gaps = 5/119 (4%)
Frame = +2
Query: 258 LTGPASKWYTNLDKTRIQ-----TFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETF 312
L G A WY L + + T+ D F+ ++ D + + Q + T
Sbjct: 44 LEGVARDWYNVLTRAKPVGSPPWTWADFSAEFMNRFLPQSVRDGFVRDFERLEQAEGMTV 223
Query: 313 KEYAQRWRDTAAQVSPRIEEKEMTKLFLKTLNHFYYKKMVGSTPKSFAEMVGMGVQLEE 371
EY+ + + V + E+E K F++ L + +K +VGS + +E++ + + +E+
Sbjct: 224 SEYSAHFTHLSRYVPYPLLEEERVKRFVRGLKEYLFKSVVGSKSSTLSEVLSLALLVEQ 400
>AW719943
Length = 508
Score = 40.8 bits (94), Expect = 0.002
Identities = 22/43 (51%), Positives = 24/43 (55%)
Frame = +2
Query: 467 QQQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQ 509
QQQ QQQ QP QQ P+QQ QQ FQQQ QQ+ Q
Sbjct: 89 QQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQ 217
Score = 39.7 bits (91), Expect = 0.005
Identities = 22/39 (56%), Positives = 25/39 (63%)
Frame = +2
Query: 472 QQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQ 510
QQQP QQQ Q P QQ P+QQ N QQQ +QQ+ QQ
Sbjct: 92 QQQPQQQQQLFQ-PQQQSPFQQNSLFNSQQQQFQQQQQQ 205
Score = 37.7 bits (86), Expect = 0.020
Identities = 22/50 (44%), Positives = 25/50 (50%)
Frame = +2
Query: 457 SPQNVQPQSVQQQNFQQQPYQQQPYQQQPYQQYPYQQYPQQNFQQQPYQQ 506
+PQ Q QQQ FQ P QQ P+QQ QQ+ QQ QQQ Q
Sbjct: 80 TPQQQQQPQQQQQLFQ--PQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQ 223
Score = 30.4 bits (67), Expect = 3.3
Identities = 25/53 (47%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 438 PQIPQYPQIPQYPQFPQNPSP-QNVQPQSVQQQNFQQQPYQQQPYQQQPYQQY 489
PQ Q PQ Q PQ SP Q + QQQ FQQQ QQQ QQQ +Q +
Sbjct: 83 PQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQ--QQQ--QQQQHQLF 229
Score = 29.3 bits (64), Expect = 7.3
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +2
Query: 450 PQFPQNPSPQNVQPQSVQQQNFQQQPY----QQQPYQQQPYQQYPYQQY 494
PQ Q P Q Q QQ FQQ QQQ QQQ QQ +Q +
Sbjct: 83 PQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQLF 229
>TC7888 similar to UP|Q40336 (Q40336) Proline-rich cell wall protein,
partial (60%)
Length = 913
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/115 (26%), Positives = 45/115 (38%), Gaps = 10/115 (8%)
Frame = +3
Query: 426 PTSH---PFQQTNNHPQIPQYPQIPQYPQFPQNPSPQNVQPQSVQQQNFQQQPY------ 476
P SH P P+ P YP+ P + P P P V+P V + + PY
Sbjct: 291 PPSHGPEPCPPPKPSPKPPHYPK-PPVVKPPHVPKPPVVKPPHVPKPPIVKPPYVPKPPH 467
Query: 477 -QQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMPINPIPVTYAELLP 530
+ P + PY P P + P P P+PP +P+ P V ++P
Sbjct: 468 VPKPPIVKPPYVPKPPVVKPPPYVPKPPVVSPPYVPKPPVVPVTPPYVPKPPVVP 632
Score = 35.8 bits (81), Expect = 0.078
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 2/132 (1%)
Frame = +3
Query: 419 QHIAAITPTSH-PFQQTNNHPQIPQYPQIPQYPQFPQNPSPQNVQPQSVQQQNFQQQPY- 476
QH + P H P + +H P P P P+ P P P V+P V + + P+
Sbjct: 243 QHPPIVKPPVHKPPKYPPSHGPEPCPPPKPS-PKPPHYPKPPVVKPPHVPKPPVVKPPHV 419
Query: 477 QQQPYQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMPINPIPVTYAELLPGLLKKN 536
+ P + PY P P+ + PY +P +PP P P P + P + K
Sbjct: 420 PKPPIVKPPYVPKP-PHVPKPPIVKPPYVPKPPVVKPP--PYVPKPPVVS---PPYVPKP 581
Query: 537 LVQTRTAPPIPE 548
V T P +P+
Sbjct: 582 PVVPVTPPYVPK 617
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 40.0 bits (92), Expect = 0.004
Identities = 35/121 (28%), Positives = 42/121 (33%), Gaps = 14/121 (11%)
Frame = +1
Query: 411 PQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYP--------QIPQYPQFPQNPSPQNVQ 462
P+ P+Y +P P NNHP P Q P P P+ PSP + Q
Sbjct: 88 PKTPSPSYSPPNVPSPPKAP--SPNNHPPYTPTPPKTPSPTSQPPYIPLPPKTPSPIS-Q 258
Query: 463 PQSVQQQNFQQQPYQQQPY------QQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPRM 516
P V P Q PY P Q P+ P P Q P P PP+
Sbjct: 259 PPHVPTPPSTPSPISQPPYTPTPPKTPSPTSQPPHTPTPPNT--PSPISQPPYTPTPPKT 432
Query: 517 P 517
P
Sbjct: 433 P 435
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,423,977
Number of Sequences: 28460
Number of extensions: 588920
Number of successful extensions: 6089
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 4414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5442
length of query: 2306
length of database: 4,897,600
effective HSP length: 105
effective length of query: 2201
effective length of database: 1,909,300
effective search space: 4202369300
effective search space used: 4202369300
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Medicago: description of AC148289.13