TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148241.10 - phase: 1 /pseudo
         (611 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC14216 UP|Q84KK4 (Q84KK4) S-adenosyl-L-methionine: 2,7,4'-trihy...    30  1.1
TC14296 similar to GB|AAM47342.1|21360453|AY113034 AT3g02540/F16...    27  7.3
BP028705                                                               27  9.6

>TC14216 UP|Q84KK4 (Q84KK4) S-adenosyl-L-methionine:
           2,7,4'-trihydroxyisoflavanone 4'-O-methyltransferase,
           complete
          Length = 1696

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = -2

Query: 64  RKTYSNLEISTKTNGCN----TKSLSKMGSLSIKLRKLSHVRYRESTKAISTQLV*LVFF 119
           R+ ++N   +T ++ CN    T++L  M  L++   KL HVR R  +     Q + L F 
Sbjct: 993 RERFTNQFGNTPSSPCNINKRTQTLKHM--LTLLQSKLKHVRIRRHSLLKHAQRIRLRFL 820

Query: 120 VARIFAVKRCCIL 132
           V ++     CC L
Sbjct: 819 VQKLPEALPCCAL 781


>TC14296 similar to GB|AAM47342.1|21360453|AY113034 AT3g02540/F16B3_17
            {Arabidopsis thaliana;}, partial (76%)
          Length = 1567

 Score = 27.3 bits (59), Expect = 7.3
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 462  HFNSICSLISMYGATCPVLKIIAKDAKK 489
            + ++  + I +YGATCP+ +I+ K  KK
Sbjct: 1480 YIHNCLAFIIVYGATCPMTEILNKK*KK 1563


>BP028705 
          Length = 474

 Score = 26.9 bits (58), Expect = 9.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +3

Query: 116 LVFFVARIFAVKRCCILLTM 135
           L+F  +R + +K CC+++TM
Sbjct: 27  LLFSTSRTYEIKECCVIVTM 86


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.359    0.157    0.535 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,431,172
Number of Sequences: 28460
Number of extensions: 117358
Number of successful extensions: 1134
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 286
Number of HSP's gapped (non-prelim): 884
length of query: 611
length of database: 4,897,600
effective HSP length: 96
effective length of query: 515
effective length of database: 2,165,440
effective search space: 1115201600
effective search space used: 1115201600
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 58 (26.9 bits)