TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147963.2 - phase: 0 
         (129 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC9742 similar to UP|Q8LBR0 (Q8LBR0) Phloem-specific lectin PP2-...   131  3e-32
AV772932                                                               79  2e-16
TC8955 weakly similar to UP|Q9FLU7 (Q9FLU7) Phloem-specific lect...    65  3e-12
TC13194 weakly similar to UP|Q94EW1 (Q94EW1) Nictaba, partial (29%)    60  9e-11
CB828206                                                               52  4e-08
BP048367                                                               38  6e-04
TC14653 weakly similar to UP|Q9FLU7 (Q9FLU7) Phloem-specific lec...    26  1.9
TC13201 similar to UP|Q8LRL6 (Q8LRL6) Nam-like protein 9, partia...    26  2.5
TC9856 weakly similar to UP|Q9LW75 (Q9LW75) Dbj|BAA81871.1, part...    25  4.2
TC8072                                                                 24  9.3
TC9941                                                                 24  9.3

>TC9742 similar to UP|Q8LBR0 (Q8LBR0) Phloem-specific lectin PP2-like
           protein, partial (20%)
          Length = 794

 Score =  131 bits (330), Expect = 3e-32
 Identities = 75/125 (60%), Positives = 89/125 (71%), Gaps = 8/125 (6%)
 Frame = +1

Query: 13  VVYLITKVSHRVYGLDSAPAEVSVAMANKVQNGM-AYLYNKYED------TMFYENHRKM 65
           V+ LI  VSHR YGLDSAP+EVS  +AN V +    YL+NK E       T+F   HR +
Sbjct: 226 VLDLIMNVSHRGYGLDSAPSEVSSTVANNVMHTKKVYLWNKNEKNMCEKYTLFRGFHRDV 405

Query: 66  ERNKLMEDNKEIRVPSKRDDGWMEIELGEFFC-GEVDMEVKMSVMEVGYRLKGGLIVEGI 124
            R  L+  ++    P KRDDGWMEIE+GEFFC GE+D EVK+SVMEVGY+LKGGLIVEGI
Sbjct: 406 ARETLIIQDQINSGPLKRDDGWMEIEVGEFFCDGEIDEEVKVSVMEVGYQLKGGLIVEGI 585

Query: 125 EVRPK 129
           EVRPK
Sbjct: 586 EVRPK 600


>AV772932 
          Length = 481

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 35/47 (74%), Positives = 41/47 (86%)
 Frame = -3

Query: 83  RDDGWMEIELGEFFCGEVDMEVKMSVMEVGYRLKGGLIVEGIEVRPK 129
           RDDGWMEIELGEFF G  D+E+KM + E+GY+LKGGL+ EGIEVRPK
Sbjct: 479 RDDGWMEIELGEFFSGGGDVEIKMGLREMGYQLKGGLVFEGIEVRPK 339


>TC8955 weakly similar to UP|Q9FLU7 (Q9FLU7) Phloem-specific lectin-like
           protein, partial (12%)
          Length = 693

 Score = 65.5 bits (158), Expect = 3e-12
 Identities = 33/52 (63%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
 Frame = +2

Query: 80  PSKRDDGWMEIELGEFFC-GEVDMEVKMSVMEV-GYRLKGGLIVEGIEVRPK 129
           P +R DGW+E+ELGEFFC G  D EV+M+V EV G   KGGL+V+GIE+RPK
Sbjct: 41  PKERADGWLEMELGEFFCEGGEDREVEMAVCEVKGGDWKGGLVVQGIEIRPK 196


>TC13194 weakly similar to UP|Q94EW1 (Q94EW1) Nictaba, partial (29%)
          Length = 471

 Score = 60.5 bits (145), Expect = 9e-11
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
 Frame = +1

Query: 80  PSKRDDGWMEIELGEFFCGEV-DMEVKMSVMEV-GYRLKGGLIVEGIEVRPK 129
           P+ R DGW+EIE+GEF    + D E++MSV+E+ GY  K GLI+EGIEVRPK
Sbjct: 28  PAVRSDGWLEIEMGEFSNSSLEDEELQMSVIEIQGYSSKSGLILEGIEVRPK 183


>CB828206 
          Length = 466

 Score = 51.6 bits (122), Expect = 4e-08
 Identities = 29/52 (55%), Positives = 38/52 (72%), Gaps = 2/52 (3%)
 Frame = +1

Query: 80  PSKRDDGWMEIELGEFF-CGEVDMEVKMSVMEVGYR-LKGGLIVEGIEVRPK 129
           PS R DG +EIE+GEFF  G  D E+++S++EV  R  K GL +EGIEVRP+
Sbjct: 49  PSVRSDG*LEIEMGEFFNSGLEDEELQLSILEVNSRNWKSGLHLEGIEVRPR 204


>BP048367 
          Length = 205

 Score = 37.7 bits (86), Expect = 6e-04
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = -1

Query: 111 VGYRLKGGLIVEGIEVRPK 129
           VGY LKGGLI+EG+EVRPK
Sbjct: 205 VGYPLKGGLIIEGLEVRPK 149


>TC14653 weakly similar to UP|Q9FLU7 (Q9FLU7) Phloem-specific lectin-like
           protein, partial (45%)
          Length = 643

 Score = 26.2 bits (56), Expect = 1.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 5   ILTPNTTYVVYLITKVSHRVYGLDSAPAEV 34
           +L+P T Y  YL+ K S   YG +    EV
Sbjct: 554 MLSPETMYGAYLVFKPSGGAYGFEFQSVEV 643


>TC13201 similar to UP|Q8LRL6 (Q8LRL6) Nam-like protein 9, partial (22%)
          Length = 465

 Score = 25.8 bits (55), Expect = 2.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 71  MEDNKEIRVPSKRDDGWMEIELGEFFCGEVDMEVK 105
           ++D   + V     D  +E+E  EFF G V+ E +
Sbjct: 221 IDDADGVAVEESTGDAALEVEADEFFVGGVESEAR 117


>TC9856 weakly similar to UP|Q9LW75 (Q9LW75) Dbj|BAA81871.1, partial (13%)
          Length = 532

 Score = 25.0 bits (53), Expect = 4.2
 Identities = 11/29 (37%), Positives = 17/29 (57%)
 Frame = +3

Query: 35  SVAMANKVQNGMAYLYNKYEDTMFYENHR 63
           S A   K+ N +  L + Y+ T+F+ NHR
Sbjct: 360 SKARLKKIVNVLV*LRHMYQSTLFHLNHR 446


>TC8072 
          Length = 723

 Score = 23.9 bits (50), Expect = 9.3
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -2

Query: 43  QNGMAYLYNKYEDTMFYENHRKMERNKLMEDNKE 76
           +N   Y+++KY D +  +    ++RN ++   KE
Sbjct: 614 RNKYLYIFDKYHDNLPIKTIHLIDRNMVLPRQKE 513


>TC9941 
          Length = 557

 Score = 23.9 bits (50), Expect = 9.3
 Identities = 9/19 (47%), Positives = 12/19 (62%)
 Frame = -3

Query: 73  DNKEIRVPSKRDDGWMEIE 91
           D  E+   S+ DDGW E+E
Sbjct: 276 DVDEVVAGSEEDDGWAELE 220


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.318    0.136    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,750,783
Number of Sequences: 28460
Number of extensions: 17343
Number of successful extensions: 95
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of query: 129
length of database: 4,897,600
effective HSP length: 80
effective length of query: 49
effective length of database: 2,620,800
effective search space: 128419200
effective search space used: 128419200
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)