TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147538.7 - phase: 0 /pseudo
         (113 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC14677 similar to PIR|T39903|T39903 serine-rich protein - fissi...    28  0.17
AW164060                                                               27  0.37
TC17927 UP|Q8GRY7 (Q8GRY7) bZIP with a Ring-finger motif, complete     27  0.49
AV422360                                                               27  0.64
BP038960                                                               26  1.1
TC9787                                                                 26  1.1
AV419126                                                               26  1.1
TC12505 similar to UP|BAD00698 (BAD00698) Sericin 1A, partial (5%)     25  1.4
BP047195                                                               25  1.4
TC10643 similar to UP|BAC84847 (BAC84847) Acidic nuclear phospho...    25  1.4
TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly pr...    25  1.8
TC17039 similar to UP|AAR92355 (AAR92355) At1g30300, partial (22%)     25  2.4
AV418433                                                               25  2.4
TC15541 similar to UP|Q9AT33 (Q9AT33) Endoxyloglucan transferase...    24  3.2
BP036655                                                               24  3.2
TC9939 homologue to UP|GSA_SOYBN (P45621) Glutamate-1-semialdehy...    24  3.2
BI420041                                                               24  4.1
TC14970 similar to UP|O24294 (O24294) Legumin (Minor small) prec...    24  4.1
TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (...    24  4.1
BP033791                                                               24  4.1

>TC14677 similar to PIR|T39903|T39903 serine-rich protein - fission yeast
           (Schizosaccharomyces                pombe)
           {Schizosaccharomyces pombe;}, partial (3%)
          Length = 616

 Score = 28.5 bits (62), Expect = 0.17
 Identities = 14/36 (38%), Positives = 20/36 (54%)
 Frame = -2

Query: 14  KSLNILQFSLNRPSSLCCVDEDGDEEMEIDEEDVED 49
           K  +I  F+ +    L  VDEDGD    +D+ED+ D
Sbjct: 360 KICSIFDFAADAKLILTYVDEDGDSVTLVDDEDLLD 253


>AW164060 
          Length = 406

 Score = 27.3 bits (59), Expect = 0.37
 Identities = 10/17 (58%), Positives = 15/17 (87%)
 Frame = -2

Query: 33  DEDGDEEMEIDEEDVED 49
           D DGDE++E D+E+V+D
Sbjct: 402 DHDGDEKVEGDDEEVDD 352


>TC17927 UP|Q8GRY7 (Q8GRY7) bZIP with a Ring-finger motif, complete
          Length = 1793

 Score = 26.9 bits (58), Expect = 0.49
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 35  DGDEEMEIDEEDVED-HVQVNFVSGNHNKMNIADQDLAQLTEKKNNPCGFQ 84
           +GD++ + DE+DV+D   +V +  GN  K  +  ++ A L+    +    Q
Sbjct: 745 EGDDDDDDDEDDVDDLENEVKYGQGNRMKARLQWEEDADLSSSSGHDSQMQ 897


>AV422360 
          Length = 463

 Score = 26.6 bits (57), Expect = 0.64
 Identities = 13/42 (30%), Positives = 18/42 (41%)
 Frame = -3

Query: 58  GNHNKMNIADQDLAQLTEKKNNPCGFQASIKDSFEVKLEQEL 99
           GNH+ MN+  Q+    TE +   C  +   K   E   E  L
Sbjct: 134 GNHDSMNLQTQNAKPRTETETGVCSCELLEKTKLETVTESGL 9


>BP038960 
          Length = 524

 Score = 25.8 bits (55), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 33  DEDGDEEMEIDEEDVEDHVQVNFVSG 58
           D D DEE E +EE+ ++H     VSG
Sbjct: 327 DYDDDEEEEEEEEEEDEHADRVAVSG 404


>TC9787 
          Length = 716

 Score = 25.8 bits (55), Expect = 1.1
 Identities = 13/36 (36%), Positives = 18/36 (49%)
 Frame = +1

Query: 71  AQLTEKKNNPCGFQASIKDSFEVKLEQELNGLRQKA 106
           A  TEKKNN   +     D  E  L  + +GL ++A
Sbjct: 121 AATTEKKNNVTSYGYLFSDDVEATLFMDQHGLMRRA 228


>AV419126 
          Length = 230

 Score = 25.8 bits (55), Expect = 1.1
 Identities = 10/18 (55%), Positives = 13/18 (71%)
 Frame = -2

Query: 31  CVDEDGDEEMEIDEEDVE 48
           C DED +EE + +EED E
Sbjct: 184 CEDEDDEEEHDEEEEDTE 131


>TC12505 similar to UP|BAD00698 (BAD00698) Sericin 1A, partial (5%)
          Length = 569

 Score = 25.4 bits (54), Expect = 1.4
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -3

Query: 32  VDEDGDEEMEIDEEDVEDHVQV 53
           V+E+G+EE E + +D +D VQV
Sbjct: 498 VNENGEEEEEEEVDDDDDDVQV 433


>BP047195 
          Length = 390

 Score = 25.4 bits (54), Expect = 1.4
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +1

Query: 33  DEDGDEEMEIDEEDVEDHVQVNFVS 57
           DE+ +E+ + D +++ DH++V  V+
Sbjct: 85  DEEEEEDEDEDSDEIHDHLRVRVVT 159


>TC10643 similar to UP|BAC84847 (BAC84847) Acidic nuclear
           phosphoprotein-like protein, partial (5%)
          Length = 789

 Score = 25.4 bits (54), Expect = 1.4
 Identities = 22/82 (26%), Positives = 37/82 (44%), Gaps = 7/82 (8%)
 Frame = +2

Query: 33  DEDGDEEMEIDEEDVEDHVQVNFVSGNHNKMNIADQD------LAQLTEKKNNPCGFQAS 86
           +ED DEE E D E+  D  +     G  ++  + D+D       ++   +K+  C    S
Sbjct: 38  EEDEDEEEEEDSEESSDDDEDESAEGG-SRGTLVDEDENDNGRSSRKRTRKSAGCSVSVS 214

Query: 87  IKDSFEV-KLEQELNGLRQKAG 107
              S  V +L  E++G+ Q  G
Sbjct: 215 STPSQLVQQLNTEVSGVLQDGG 280


>TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly protein
           1-like protein 3, partial (81%)
          Length = 1298

 Score = 25.0 bits (53), Expect = 1.8
 Identities = 9/17 (52%), Positives = 14/17 (81%)
 Frame = +2

Query: 33  DEDGDEEMEIDEEDVED 49
           DEDGDE+ + D++D E+
Sbjct: 782 DEDGDEDEDEDDDDDEE 832



 Score = 25.0 bits (53), Expect = 1.8
 Identities = 10/17 (58%), Positives = 13/17 (75%)
 Frame = +2

Query: 33  DEDGDEEMEIDEEDVED 49
           D+D DEE E D++D ED
Sbjct: 812 DDDDDEEEEDDDDDDED 862



 Score = 23.1 bits (48), Expect = 7.0
 Identities = 9/17 (52%), Positives = 13/17 (75%)
 Frame = +2

Query: 33  DEDGDEEMEIDEEDVED 49
           DED DE+ + DEE+ +D
Sbjct: 794 DEDEDEDDDDDEEEEDD 844


>TC17039 similar to UP|AAR92355 (AAR92355) At1g30300, partial (22%)
          Length = 571

 Score = 24.6 bits (52), Expect = 2.4
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = -1

Query: 30  CCVDEDGDEEMEIDEEDVEDHVQVNFVSGNHNKMNIADQDLAQLTEKKNNPCGFQASIKD 89
           C  +  G E ME+  +     + V  +S +H +  +          K + PCG Q   +D
Sbjct: 280 CLENYFGSERMEVQVQKYYLIISVWVLSNHHEQAALIFLPFWTTPSKTHGPCGDQT--RD 107

Query: 90  SFEV 93
           S+++
Sbjct: 106 SYQL 95


>AV418433 
          Length = 401

 Score = 24.6 bits (52), Expect = 2.4
 Identities = 8/12 (66%), Positives = 10/12 (82%)
 Frame = +2

Query: 21  FSLNRPSSLCCV 32
           FS+NRP S CC+
Sbjct: 230 FSINRPDSHCCI 265


>TC15541 similar to UP|Q9AT33 (Q9AT33) Endoxyloglucan transferase, partial
           (37%)
          Length = 593

 Score = 24.3 bits (51), Expect = 3.2
 Identities = 10/29 (34%), Positives = 16/29 (54%)
 Frame = -3

Query: 47  VEDHVQVNFVSGNHNKMNIADQDLAQLTE 75
           V +HV +  + GNHN  ++  + L   TE
Sbjct: 486 VLEHVTI*HIKGNHNPSSVISRQLNGSTE 400


>BP036655 
          Length = 556

 Score = 24.3 bits (51), Expect = 3.2
 Identities = 14/69 (20%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
 Frame = -3

Query: 32  VDEDGDEEMEIDEED--VEDHVQVNFVSGNHNKMNIADQDLAQL----TEKKNNPCGFQA 85
           + +DGD++  +DEE+  VE+    + ++ + +   + ++   ++     E++   CG + 
Sbjct: 398 LSDDGDDDEVVDEEEEVVEEWSDDDDINDDESDDEVEEESETEIETEKEEEEEEECGVE- 222

Query: 86  SIKDSFEVK 94
           +++D   VK
Sbjct: 221 NVEDEMGVK 195


>TC9939 homologue to UP|GSA_SOYBN (P45621) Glutamate-1-semialdehyde
           2,1-aminomutase, chloroplast precursor  (GSA)
           (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) ,
           partial (52%)
          Length = 903

 Score = 24.3 bits (51), Expect = 3.2
 Identities = 11/23 (47%), Positives = 13/23 (55%)
 Frame = +3

Query: 10  AWVRKSLNILQFSLNRPSSLCCV 32
           AWVR  L +L   + R SSL  V
Sbjct: 576 AWVRSDLLVLSLEMRRSSSLRAV 644


>BI420041 
          Length = 452

 Score = 23.9 bits (50), Expect = 4.1
 Identities = 9/17 (52%), Positives = 13/17 (75%)
 Frame = +2

Query: 33  DEDGDEEMEIDEEDVED 49
           DEDGDE  + DE++ E+
Sbjct: 299 DEDGDEYYDDDEQEEEE 349


>TC14970 similar to UP|O24294 (O24294) Legumin (Minor small) precursor,
           partial (51%)
          Length = 1566

 Score = 23.9 bits (50), Expect = 4.1
 Identities = 11/35 (31%), Positives = 19/35 (53%)
 Frame = +1

Query: 35  DGDEEMEIDEEDVEDHVQVNFVSGNHNKMNIADQD 69
           D DE+ E ++ED E H + +  SG   +    ++D
Sbjct: 505 DEDEDEEDEDEDQEQHGRHSRPSGRRTRRPSREED 609


>TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (SPBC3D6.14C
           protein) (Fragment), partial (15%)
          Length = 543

 Score = 23.9 bits (50), Expect = 4.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +3

Query: 33  DEDGDEEMEIDEEDVED 49
           D+DG+EE + D++D E+
Sbjct: 321 DDDGEEEEDDDDDDEEE 371


>BP033791 
          Length = 523

 Score = 23.9 bits (50), Expect = 4.1
 Identities = 6/27 (22%), Positives = 18/27 (66%)
 Frame = -1

Query: 34  EDGDEEMEIDEEDVEDHVQVNFVSGNH 60
           ++GD  +E+D++ + ++  V+   G++
Sbjct: 514 DEGDSSVELDDDSITENTVVSLAGGDN 434


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.314    0.133    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,824,806
Number of Sequences: 28460
Number of extensions: 19098
Number of successful extensions: 134
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of query: 113
length of database: 4,897,600
effective HSP length: 89
effective length of query: 24
effective length of database: 2,364,660
effective search space: 56751840
effective search space used: 56751840
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.7 bits)