BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147405.11 + phase: 0
(874 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV408441 207 6e-54
TC11010 homologue to UP|PPX2_ARATH (P48528) Serine/threonine pro... 155 2e-38
TC16665 homologue to UP|P2A_TOBAC (Q9XGH7) Serine/threonine prot... 154 4e-38
TC12870 homologue to GB|AAC39461.1|3153205|ATU80922 serine/threo... 107 1e-37
TC11019 homologue to UP|Q9MB04 (Q9MB04) Type 2A protein phosphat... 152 2e-37
TC15832 homologue to UP|PP1_MEDVA (P48488) Serine/threonine prot... 130 1e-30
TC15730 homologue to UP|O65844 (O65844) Protein phosphatase 1, c... 127 1e-29
TC17330 homologue to UP|O65844 (O65844) Protein phosphatase 1, c... 100 1e-21
TC17385 homologue to UP|Q42912 (Q42912) Ser/Thr protein phosphat... 95 5e-20
AV422344 93 2e-19
AV418066 81 6e-16
TC14604 similar to UP|Q9FSV4 (Q9FSV4) Serine/threonine protein p... 80 1e-15
AV427577 77 2e-14
TC8812 homologue to UP|Q84K11 (Q84K11) Type 5 protein serine/thr... 72 4e-13
TC9893 homologue to UP|PP1_MEDVA (P48488) Serine/threonine prote... 72 4e-13
TC16793 homologue to UP|Q9MB06 (Q9MB06) Type 2A protein phosphat... 61 7e-10
TC15732 homologue to UP|Q8LSN3 (Q8LSN3) Serine/threonine protein... 57 1e-08
CN825613 57 2e-08
AV768297 54 8e-08
TC18015 53 2e-07
>AV408441
Length = 314
Score = 207 bits (527), Expect = 6e-54
Identities = 101/104 (97%), Positives = 104/104 (99%)
Frame = +2
Query: 459 GVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSIN 518
GVRLHHRAVV+AAETGGALGGMVRQLSIDQFENEGRRVSYGTPE+ATAARKLLDRQMSIN
Sbjct: 2 GVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSIN 181
Query: 519 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSS 562
SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFS+
Sbjct: 182 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFST 313
>TC11010 homologue to UP|PPX2_ARATH (P48528) Serine/threonine protein
phosphatase PP-X isozyme 2 , partial (70%)
Length = 770
Score = 155 bits (393), Expect = 2e-38
Identities = 88/207 (42%), Positives = 122/207 (58%)
Frame = +3
Query: 547 NEIADLCDSAERIFSSEPTVIQLRAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYID 606
+E+ LC A I E V ++ AP+ I GD+HGQF D+ LF GD +
Sbjct: 186 SEVKTLCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELF------KVGGDCPKTN 347
Query: 607 YLFLGDYVDRGQHSLETISLLLALKVEYPNNIHLIRGNHEAADINALFGFRIECIERMGE 666
YLFLGD+VDRG +S+ET LLLALKV YP+ I LIRGNHE+ I ++GF EC+ + G
Sbjct: 348 YLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYG- 524
Query: 667 RDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHLEQIENIQRPITMEAGSIVL 726
+ W +F++L L+ALIE KI+ +HGG+ +I+ L+QI + R + +
Sbjct: 525 --SVKVWRYGTDVFDYLSLSALIENKIVSVHGGLSPAISRLDQIRTMDRKQEVPHDG-AM 695
Query: 727 MDLLWSDPTENDSVEGLRPNARGPGLV 753
DLLWSDP D V+G + RG G +
Sbjct: 696 CDLLWSDP--EDIVDGWGLSPRGAGFL 770
>TC16665 homologue to UP|P2A_TOBAC (Q9XGH7) Serine/threonine protein
phosphatase PP2A catalytic subunit , partial (67%)
Length = 855
Score = 154 bits (390), Expect = 4e-38
Identities = 90/237 (37%), Positives = 135/237 (55%), Gaps = 8/237 (3%)
Frame = +3
Query: 508 RKLLDRQMSINSVPK-------KVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIF 560
R + ++++S++SVP + IA L++ + P+ Q E+ LC+ A+ I
Sbjct: 186 RSVAEKELSMDSVPSNSHGNLDEQIAQLMQCK----PLSEQ------EVRVLCEKAKEIL 335
Query: 561 SSEPTVIQLRAPIKIFGDLHGQFGDLMRLFDEYGS-PSTAGDIAYIDYLFLGDYVDRGQH 619
E V +++P+ I GD+HGQF DL LF G P T +YLF+GDYVDRG +
Sbjct: 336 MEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDT-------NYLFMGDYVDRGYY 494
Query: 620 SLETISLLLALKVEYPNNIHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRL 679
S+ET++LL+ALKV Y I ++RGNHE+ I ++GF EC+ + G + W L
Sbjct: 495 SVETVTLLVALKVRYRQRITILRGNHESRQITQVYGFYDECLRKYGNAN---VWKIFTDL 665
Query: 680 FNWLPLAALIEKKIICMHGGIGRSINHLEQIENIQRPITMEAGSIVLMDLLWSDPTE 736
F++ PL AL+E +I C+HGG+ SI L+ I N R + + DLLWSDP +
Sbjct: 666 FDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR-VQEVPHEGPMCDLLWSDPDD 833
>TC12870 homologue to GB|AAC39461.1|3153205|ATU80922 serine/threonine
protein phosphatase type one {Arabidopsis thaliana;} ,
partial (55%)
Length = 546
Score = 107 bits (268), Expect(2) = 1e-37
Identities = 54/91 (59%), Positives = 64/91 (69%)
Frame = +3
Query: 607 YLFLGDYVDRGQHSLETISLLLALKVEYPNNIHLIRGNHEAADINALFGFRIECIERMGE 666
YLFLGDYVDRG+ SLETI LLLA K+ YP+ I+L+RGNHE A IN ++GF EC R
Sbjct: 285 YLFLGDYVDRGKQSLETICLLLAYKIRYPDKIYLLRGNHEDAKINRIYGFYDECKRRFNV 464
Query: 667 RDGIWTWHRINRLFNWLPLAALIEKKIICMH 697
R W FN LP+AALI++KIICMH
Sbjct: 465 R----LWKIFTDCFNCLPVAALIDEKIICMH 545
Score = 67.0 bits (162), Expect(2) = 1e-37
Identities = 36/76 (47%), Positives = 51/76 (66%)
Frame = +2
Query: 524 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVIQLRAPIKIFGDLHGQF 583
VI LL+ +G K Q L +EI LC +A +IF S+P +++LRAPI+I GD+HGQ+
Sbjct: 68 VIRRLLEGKGGK-----QVQLSESEIRQLCVNARQIFLSQPNLLELRAPIRICGDIHGQY 232
Query: 584 GDLMRLFDEYGSPSTA 599
DL+RLF+ G P +A
Sbjct: 233 QDLLRLFEYGGYPPSA 280
>TC11019 homologue to UP|Q9MB04 (Q9MB04) Type 2A protein phosphatase-3
(Serine/threonine protein phosphatase) , partial (71%)
Length = 746
Score = 152 bits (385), Expect = 2e-37
Identities = 82/203 (40%), Positives = 118/203 (57%), Gaps = 1/203 (0%)
Frame = +2
Query: 548 EIADLCDSAERIFSSEPTVIQLRAPIKIFGDLHGQFGDLMRLFDEYGS-PSTAGDIAYID 606
++ +LC+ A+ I E V +++P+ I GD+HGQF DL LF G P T +
Sbjct: 167 QVKELCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDT-------N 325
Query: 607 YLFLGDYVDRGQHSLETISLLLALKVEYPNNIHLIRGNHEAADINALFGFRIECIERMGE 666
YLF+GDYVDRG +S+ET++LL+ALKV Y I ++RGNHE+ I ++GF EC+ + G
Sbjct: 326 YLFMGDYVDRGYYSVETVTLLVALKVRYHQRITILRGNHESRQITQVYGFYDECLRKYGN 505
Query: 667 RDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHLEQIENIQRPITMEAGSIVL 726
+ W LF++ PL AL+E +I C+HGG+ SI L+ I N R + +
Sbjct: 506 AN---VWKTFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR-VQEVPHEGPM 673
Query: 727 MDLLWSDPTENDSVEGLRPNARG 749
DLLWSDP + G+ P G
Sbjct: 674 CDLLWSDPDDRCG-WGISPRGAG 739
>TC15832 homologue to UP|PP1_MEDVA (P48488) Serine/threonine protein
phosphatase PP1 , partial (47%)
Length = 638
Score = 130 bits (326), Expect = 1e-30
Identities = 66/120 (55%), Positives = 83/120 (69%)
Frame = +3
Query: 548 EIADLCDSAERIFSSEPTVIQLRAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDY 607
EI LC SA+ IF S+P +++L APIKI GD+HGQF DL+RLF+ G P A +Y
Sbjct: 276 EIRLLCVSAKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEA------NY 437
Query: 608 LFLGDYVDRGQHSLETISLLLALKVEYPNNIHLIRGNHEAADINALFGFRIECIERMGER 667
LFLGDYVDRG+ S+ETI LLL+ K++Y N L+RGNHE A IN ++GF EC R R
Sbjct: 438 LFLGDYVDRGKQSIETICLLLSYKIKYKENFFLLRGNHECASINRIYGFYDECKRRYNVR 617
>TC15730 homologue to UP|O65844 (O65844) Protein phosphatase 1, catalytic
beta subunit (Serine/threonine protein phosphatase) ,
partial (52%)
Length = 855
Score = 127 bits (318), Expect = 1e-29
Identities = 66/141 (46%), Positives = 94/141 (65%)
Frame = +1
Query: 686 AALIEKKIICMHGGIGRSINHLEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRP 745
AALI++KI+CMHGG+ +N+L+QI N+QRP + + L DLLWSDP++ ++G
Sbjct: 16 AALIDEKILCMHGGLSPDLNNLDQIRNLQRPTDVPDTGL-LCDLLWSDPSKE--IQGWGM 186
Query: 746 NARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTAN 805
N RG TFG D+V EF +DL LI RAH+ V DG+E FA L+T+FSA NYCG +
Sbjct: 187 NDRGVSY-TFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFD 363
Query: 806 NAGAILVLGRDLVVVPKLIHP 826
NAGA++ + L+ +++ P
Sbjct: 364 NAGAMMSVDETLMCSFQILKP 426
>TC17330 homologue to UP|O65844 (O65844) Protein phosphatase 1, catalytic
beta subunit (Serine/threonine protein phosphatase) ,
partial (34%)
Length = 499
Score = 100 bits (248), Expect = 1e-21
Identities = 57/111 (51%), Positives = 75/111 (67%)
Frame = +2
Query: 524 VIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVIQLRAPIKIFGDLHGQF 583
+I LL+ RG +P +Q L +EI LC +A IF +P +++L APIKI GD+HGQ+
Sbjct: 188 IINRLLEVRG-RPG--KQVQLSESEIRQLCAAAREIFLHQPNLLELEAPIKICGDVHGQY 358
Query: 584 GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEY 634
DL+RLF+ G P + +YLFLGDYVDRG+ SLETI LLLA KV+Y
Sbjct: 359 SDLLRLFEYGGLPPES------NYLFLGDYVDRGKQSLETICLLLAYKVKY 493
>TC17385 homologue to UP|Q42912 (Q42912) Ser/Thr protein phosphatase
homologous to PPX (Serine/threonine protein
phosphatase) , partial (35%)
Length = 325
Score = 94.7 bits (234), Expect = 5e-20
Identities = 44/103 (42%), Positives = 66/103 (63%)
Frame = +1
Query: 563 EPTVIQLRAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLE 622
E V + +P+ + GD+HGQF DLM+LF T G + +Y+F+GD+VDRG +SLE
Sbjct: 7 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQ------TGGQVPETNYIFMGDFVDRGYNSLE 168
Query: 623 TISLLLALKVEYPNNIHLIRGNHEAADINALFGFRIECIERMG 665
++LL LK YP +I L+RGN+E+ + ++GF EC + G
Sbjct: 169 VFTILLLLKARYPAHITLLRGNYESRQLTQVYGFYDECQRKYG 297
>AV422344
Length = 479
Score = 93.2 bits (230), Expect = 2e-19
Identities = 53/146 (36%), Positives = 79/146 (53%), Gaps = 4/146 (2%)
Frame = +3
Query: 559 IFSSEPTVIQLRAP----IKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYV 614
I + P+++ + P + GD+HGQ+ DL+ +F+ G PS YLF GD+V
Sbjct: 12 ILQALPSLVDITVPDGKHFTVCGDVHGQYYDLLNIFELNGLPSEENP-----YLFNGDFV 176
Query: 615 DRGQHSLETISLLLALKVEYPNNIHLIRGNHEAADINALFGFRIECIERMGERDGIWTWH 674
DRG SLE I L A K P+ IHL RGNHE+ +N ++GF E ++ +
Sbjct: 177 DRGSFSLEVILTLFAFKCMSPSAIHLARGNHESKSMNKIYGFEGEVRSKLNDT----FIE 344
Query: 675 RINRLFNWLPLAALIEKKIICMHGGI 700
+F LPLA +I +K+ +HGG+
Sbjct: 345 LFAEVFCCLPLAHVINEKVFVVHGGL 422
>AV418066
Length = 379
Score = 81.3 bits (199), Expect = 6e-16
Identities = 42/88 (47%), Positives = 56/88 (62%)
Frame = +3
Query: 740 VEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATN 799
++G N RG TFG DRV EF +DL LI RAH+ V DG+E FA L+T+FSA N
Sbjct: 9 IQGWGENERGVSY-TFGADRVKEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPN 185
Query: 800 YCGTANNAGAILVLGRDLVVVPKLIHPL 827
YCG +NAGA++ + LV +++ PL
Sbjct: 186 YCGEFDNAGAMMSVSETLVCSFQVLKPL 269
>TC14604 similar to UP|Q9FSV4 (Q9FSV4) Serine/threonine protein phosphatase
(Fragment) , partial (20%)
Length = 554
Score = 80.1 bits (196), Expect = 1e-15
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Frame = +3
Query: 824 IHPLPPAL-SPETSPERHIEDTWMQELNANRPPTPTRGRPPVANDRGSLAWI 874
IHP+PP L SPETSPER +++TWMQELN RPPTPTRGRP DRGSLA+I
Sbjct: 3 IHPIPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI 158
>AV427577
Length = 301
Score = 76.6 bits (187), Expect = 2e-14
Identities = 40/99 (40%), Positives = 57/99 (57%)
Frame = +1
Query: 638 IHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMH 697
I L RGNHE+ I ++GF EC+ + G + W LF++LPL ALIE +I C+H
Sbjct: 4 ITLTRGNHESRQITQVYGFYDECLRKYGNAN---VWKYFTDLFDYLPLTALIESQIFCLH 174
Query: 698 GGIGRSINHLEQIENIQRPITMEAGSIVLMDLLWSDPTE 736
GG+ S++ L+ I + R I + DLLWSDP +
Sbjct: 175 GGLSPSLDTLDNIRALDR-IQEVPHEGPMCDLLWSDPDD 288
>TC8812 homologue to UP|Q84K11 (Q84K11) Type 5 protein serine/threonine
phosphatase 62 kDa isoform, partial (24%)
Length = 787
Score = 72.0 bits (175), Expect = 4e-13
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Frame = +3
Query: 725 VLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE 784
++ +LLWSDP + G P+ RG GL +FG D F N+L L+VR+HE +G+E
Sbjct: 48 LMCELLWSDP---QPLPGRGPSKRGVGL-SFGGDVTKRFLQENNLDLVVRSHEVKDEGYE 215
Query: 785 RFAQGHLITLFSATNYCGTANNAGAIL-----VLGRDLVVVPKLIHP 826
G LIT+FSA NYC N GA + L D+V + HP
Sbjct: 216 IEHNGKLITVFSAPNYCDQMGNKGAFIRFKAPDLKPDIVTFSAVAHP 356
>TC9893 homologue to UP|PP1_MEDVA (P48488) Serine/threonine protein
phosphatase PP1 , partial (33%)
Length = 636
Score = 72.0 bits (175), Expect = 4e-13
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +1
Query: 746 NARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTAN 805
N RG TFG D+V+EF ++DL LI RAH+ V DG+E FA+ L+T+FSA +YCG +
Sbjct: 4 NDRGVSF-TFGADKVVEFLEHHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPHYCGEFD 180
Query: 806 NAGAIL 811
NAGA++
Sbjct: 181 NAGAMM 198
>TC16793 homologue to UP|Q9MB06 (Q9MB06) Type 2A protein phosphatase-1
(Serine/threonine protein phosphatase) , partial (30%)
Length = 652
Score = 61.2 bits (147), Expect = 7e-10
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = +2
Query: 754 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL 813
TFG D +F + N L LI RAH+ VM+G+ + +++T+FSA NYC N AIL +
Sbjct: 8 TFGQDIAAQFHHTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRYGNMAAILEI 187
Query: 814 GRDLVVVPKLIHPLPPALSPETS 836
G ++ P P + P+T+
Sbjct: 188 GENMDQNFLQFDPAPRQIEPDTT 256
>TC15732 homologue to UP|Q8LSN3 (Q8LSN3) Serine/threonine protein
phosphatase 2A , partial (39%)
Length = 612
Score = 57.0 bits (136), Expect = 1e-08
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 728 DLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFE-RF 786
DL+WSDP E +E + RG G + FG EF + N+L L+ RAH+ V +G + F
Sbjct: 15 DLMWSDPEE---IETWAVSPRGAGWL-FGSRVTTEFNHINNLDLVCRAHQLVQEGLKYMF 182
Query: 787 AQGHLITLFSATNYCGTANNAGAILVLGRDL 817
L+T++SA NYC N +IL ++
Sbjct: 183 PDKGLVTVWSAPNYCYRCGNVASILSFNENM 275
>CN825613
Length = 257
Score = 56.6 bits (135), Expect = 2e-08
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = +3
Query: 679 LFNWLPLAALIEKKIICMHGGIGRSINHLEQIENIQRPITMEAGSIVLMDLLWSDPTEND 738
LF++LPL ALIE +I C+HGG+ S++ L+ I + R I + DLLWSDP D
Sbjct: 9 LFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDR-IQEVPHEGPMCDLLWSDP---D 176
Query: 739 SVEGLRPNARGPGLVTFGPDRVMEF 763
G + RG G TFG D +F
Sbjct: 177 DRCGWEISPRGAG-YTFGQDIAGQF 248
>AV768297
Length = 536
Score = 54.3 bits (129), Expect = 8e-08
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = -2
Query: 771 LIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 827
L+ R H+ V DG+E FA+ L+T+FSA NY G +NAGA+L + LV +++ PL
Sbjct: 532 LVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPL 362
>TC18015
Length = 460
Score = 52.8 bits (125), Expect = 2e-07
Identities = 27/73 (36%), Positives = 36/73 (48%), Gaps = 1/73 (1%)
Frame = +1
Query: 577 GDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPN 636
GD+HG L L+ +FLGDY DRG H+ E + L+AL YPN
Sbjct: 82 GDIHGFITKLQNLWSNLEHSIDPSHFQTATIIFLGDYCDRGPHTREVLDFLIALPSRYPN 261
Query: 637 NIHL-IRGNHEAA 648
H+ + GNH+ A
Sbjct: 262 QRHVFLSGNHDFA 300
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,538,200
Number of Sequences: 28460
Number of extensions: 232487
Number of successful extensions: 1342
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of query: 874
length of database: 4,897,600
effective HSP length: 98
effective length of query: 776
effective length of database: 2,108,520
effective search space: 1636211520
effective search space used: 1636211520
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC147405.11