BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147178.7 + phase: 0
(379 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP069917 169 9e-43
AV766731 92 1e-19
AV772727 64 4e-11
BP041405 57 5e-09
CB826792 52 1e-07
AV429083 52 2e-07
BP035488 52 2e-07
AV421386 51 4e-07
AV417736 50 8e-07
TC19987 weakly similar to UP|Q7XJT3 (Q7XJT3) At2g17140 protein, ... 47 5e-06
AV771187 33 9e-06
AV770033 46 1e-05
BP039174 45 2e-05
BP040806 45 2e-05
AV425299 44 3e-05
BI418759 44 6e-05
BP047039 43 1e-04
AV767495 41 3e-04
BP042555 39 0.001
BP042107 39 0.002
>BP069917
Length = 402
Score = 169 bits (427), Expect = 9e-43
Identities = 81/101 (80%), Positives = 90/101 (88%)
Frame = -1
Query: 279 FSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEAKGVIKT 338
FSYTVL++GL KCS+L DA EFCVEMLEAGHS NVTTFV LV+GFCKE GIEEAKG IKT
Sbjct: 402 FSYTVLVRGLCKCSRLQDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKT 223
Query: 339 LIGKGFAFDEKAVRVFLDKKAPFSPSIWEAIFGKKAPQIPF 379
LI KGFA +EKAV+ FL+KK PFSPS+WEAIFGKKAPQ+PF
Sbjct: 222 LIEKGFAVNEKAVKDFLNKKKPFSPSVWEAIFGKKAPQMPF 100
Score = 27.7 bits (60), Expect = 3.3
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -1
Query: 193 QDADAIFNKMKETGLIPNAVAMLD---GLCKDGNFQEALKLFGLMREKG 238
QDA +M E G PN +D G CK+ +EA + EKG
Sbjct: 354 QDAFEFCVEMLEAGHSPNVTTFVDLVEGFCKEQGIEEAKGAIKTLIEKG 208
>AV766731
Length = 576
Score = 92.0 bits (227), Expect = 1e-19
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Frame = -3
Query: 207 LIPNAV---AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAI 263
LIPN V ++++GLCK A++L +M E G D++ ++ DG K H D AI
Sbjct: 559 LIPNTVKKNSLINGLCKARRISCAVELVDVMHETGPPADLITTNSLFDGLCKHHLLDKAI 380
Query: 264 RIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGF 323
+F K++ I PN Y V+I GL K +L A E +L G++LNV T+ +++G+
Sbjct: 379 ALFMKVKDPKIQPNIPPYPVIIDGLCKVGRLKIAQEIFQVLLSEGYNLNVMTYTVMINGY 200
Query: 324 CKENGIEEAKGVIKTLIGKG 343
CKE ++EA+ ++ + G
Sbjct: 199 CKEGLLDEAQALLSKMEDNG 140
Score = 58.5 bits (140), Expect = 2e-09
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Frame = -3
Query: 202 MKETGLIPNAV---AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHK 258
M ETG + + ++ DGLCK +A+ LF +++ P+I Y ++DG K +
Sbjct: 469 MHETGPPADLITTNSLFDGLCKHHLLDKAIALFMKVKDPKIQPNIPPYPVIIDGLCKVGR 290
Query: 259 ADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVG 318
A IF+ + S + N +YTV+I G K L +A +M + G N F
Sbjct: 289 LKIAQEIFQVLLSEGYNLNVMTYTVMINGYCKEGLLDEAQALLSKMEDNGCIPNAVNFQT 110
Query: 319 LVDGFCKENGIEEAKGVIKTLIGK 342
++ ++N ++A+ + + +I +
Sbjct: 109 IICALFEKNENDKAERLFREMIAR 38
>AV772727
Length = 528
Score = 63.9 bits (154), Expect = 4e-11
Identities = 28/94 (29%), Positives = 54/94 (56%)
Frame = -2
Query: 243 IVIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCV 302
++ Y +++D K H D AI + +++ I P+ ++Y ++I GL K ++ DA E
Sbjct: 527 VITYHSLLDALCKNHHVDKAIALLERVKDKGIQPDMYTYNIIIDGLCKSGRVKDAQELFQ 348
Query: 303 EMLEAGHSLNVTTFVGLVDGFCKENGIEEAKGVI 336
++L G+ LNV T+ +++G C E +EA ++
Sbjct: 347 DLLIKGYRLNVVTYNIMINGLCIEGLSDEALALL 246
Score = 53.5 bits (127), Expect = 6e-08
Identities = 23/76 (30%), Positives = 43/76 (56%)
Frame = -2
Query: 213 AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSN 272
++LD LCK+ + +A+ L +++KG PD+ Y ++DG K+ + DA +F+ +
Sbjct: 512 SLLDALCKNHHVDKAIALLERVKDKGIQPDMYTYNIIIDGLCKSGRVKDAQELFQDLLIK 333
Query: 273 SISPNAFSYTVLIQGL 288
N +Y ++I GL
Sbjct: 332 GYRLNVVTYNIMINGL 285
Score = 39.7 bits (91), Expect = 8e-04
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = -2
Query: 195 ADAIFNKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVD 251
A A+ ++K+ G+ P+ ++DGLCK G ++A +LF + KG ++V Y +++
Sbjct: 470 AIALLERVKDKGIQPDMYTYNIIIDGLCKSGRVKDAQELFQDLLIKGYRLNVVTYNIMIN 291
Query: 252 GYTKAHKADDAIRI 265
G +D+A+ +
Sbjct: 290 GLCIEGLSDEALAL 249
>BP041405
Length = 546
Score = 57.0 bits (136), Expect = 5e-09
Identities = 30/134 (22%), Positives = 65/134 (48%)
Frame = +3
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNS 273
+L+ L G + L ++ ++ G P+ Y V+ ++ D + +F++M+
Sbjct: 30 LLNRLVGHGKVEMVLAIYEQLKRLGLSPNHYTYAIVMKAL---YRKGDVVHVFQEMEEAG 200
Query: 274 ISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEAK 333
++P+++ VLI+GL K + +F E + + V + ++ GFC E ++EA+
Sbjct: 201 VTPDSYCNAVLIEGLCKNHRSDWGYQFLQEFRKVNAPIEVYAYTAVIHGFCNEMKLDEAE 380
Query: 334 GVIKTLIGKGFAFD 347
V+ + +G D
Sbjct: 381 SVVLDMERQGLVPD 422
Score = 54.7 bits (130), Expect = 3e-08
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 194 DADAIFNKMKETGLIPNA---VAMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVV 250
D +F +M+E G+ P++ +++GLCK+ + R+ ++ YTAV+
Sbjct: 162 DVVHVFQEMEEAGVTPDSYCNAVLIEGLCKNHRSDWGYQFLQEFRKVNAPIEVYAYTAVI 341
Query: 251 DGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHS 310
G+ K D+A + M+ + P+ Y+ LI G K L A++ +M+ G
Sbjct: 342 HGFCNEMKLDEAESVVLDMERQGLVPDVNIYSALICGYCKSHNLPRALDLYADMISKGIK 521
Query: 311 LN 312
N
Sbjct: 522 TN 527
>CB826792
Length = 485
Score = 52.4 bits (124), Expect = 1e-07
Identities = 26/84 (30%), Positives = 45/84 (52%)
Frame = +3
Query: 225 QEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVL 284
+E +L MRE G P I Y ++ + + K D+ +I+ M+ + +S + SY VL
Sbjct: 225 EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 404
Query: 285 IQGLYKCSKLHDAVEFCVEMLEAG 308
I GL+ K+ +A ++ +EM G
Sbjct: 405 IHGLFLNGKVKEAHDYYIEMQRKG 476
>AV429083
Length = 316
Score = 52.0 bits (123), Expect = 2e-07
Identities = 24/84 (28%), Positives = 42/84 (49%)
Frame = +3
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNS 273
++D LCK G + A + +M ++G PD+V Y+ ++DGY + M
Sbjct: 63 LVDALCKKGKVKHAKNVLAVMIKQGVAPDLVTYSTLLDGYCLTKDMYKGKYVLNAMGRVG 242
Query: 274 ISPNAFSYTVLIQGLYKCSKLHDA 297
++PN SY ++I G K + +A
Sbjct: 243 VTPNVDSYNIVINGFCKVKLVDEA 314
Score = 33.1 bits (74), Expect = 0.078
Identities = 17/45 (37%), Positives = 25/45 (54%)
Frame = +3
Query: 312 NVTTFVGLVDGFCKENGIEEAKGVIKTLIGKGFAFDEKAVRVFLD 356
+V+TF LVD CK+ ++ AK V+ +I +G A D LD
Sbjct: 42 DVSTFNILVDALCKKGKVKHAKNVLAVMIKQGVAPDLVTYSTLLD 176
>BP035488
Length = 534
Score = 52.0 bits (123), Expect = 2e-07
Identities = 39/153 (25%), Positives = 72/153 (46%), Gaps = 6/153 (3%)
Frame = +3
Query: 193 QDADAIFN-KMKETGL---IPNAVAMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTA 248
+DA+ +F+ K +E L I +L+G C GN EA +++ + PD+ Y
Sbjct: 12 EDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYAT 191
Query: 249 VVDGYTKAHKADDAIRIFRKM--QSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLE 306
+ TK K A+++FR M + + P+ +I L ++ +A+E +M E
Sbjct: 192 FIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKE 371
Query: 307 AGHSLNVTTFVGLVDGFCKENGIEEAKGVIKTL 339
G NV T+ L+ CK +E+ +++ +
Sbjct: 372 RGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM 470
Score = 42.0 bits (97), Expect = 2e-04
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQ--S 271
++D LC EAL++F M+E+G P++ Y +++ K + + + M+
Sbjct: 303 IIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKK 482
Query: 272 NSISPNAFSYTVLIQGL 288
S PNA +Y+ L+ L
Sbjct: 483 GSCMPNAVTYSCLLNSL 533
>AV421386
Length = 312
Score = 50.8 bits (120), Expect = 4e-07
Identities = 27/95 (28%), Positives = 45/95 (46%)
Frame = +1
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNS 273
++ L K + +AL L+ + P Y +DG KA + D+A++ F +M
Sbjct: 7 IISALVKSNSLNKALDLYYELISGDFSPTPCTYGPFIDGPLKAERCDEALKFFEEMLDYQ 186
Query: 274 ISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAG 308
PN+ Y +LI G K K+ A +F M++ G
Sbjct: 187 CKPNSAIYNILINGFGKAGKIDIACDFFKRMVKEG 291
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/102 (24%), Positives = 49/102 (47%)
Frame = +1
Query: 249 VVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAG 308
++ K++ + A+ ++ ++ S SP +Y I G K + +A++F EML+
Sbjct: 7 IISALVKSNSLNKALDLYYELISGDFSPTPCTYGPFIDGPLKAERCDEALKFFEEMLDYQ 186
Query: 309 HSLNVTTFVGLVDGFCKENGIEEAKGVIKTLIGKGFAFDEKA 350
N + L++GF K I+ A K ++ +G D K+
Sbjct: 187 CKPNSAIYNILINGFGKAGKIDIACDFFKRMVKEGIRPDLKS 312
Score = 40.0 bits (92), Expect = 6e-04
Identities = 22/63 (34%), Positives = 32/63 (49%)
Frame = +1
Query: 215 LDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSI 274
+DG K EALK F M + P+ IY +++G+ KA K D A F++M I
Sbjct: 115 IDGPLKAERCDEALKFFEEMLDYQCKPNSAIYNILINGFGKAGKIDIACDFFKRMVKEGI 294
Query: 275 SPN 277
P+
Sbjct: 295 RPD 303
>AV417736
Length = 428
Score = 49.7 bits (117), Expect = 8e-07
Identities = 31/128 (24%), Positives = 61/128 (47%)
Frame = +1
Query: 229 KLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGL 288
++F M + G PDI Y+ + GY ++ + A + M+ + PN +T +I G
Sbjct: 13 EIFNDMVKAGIEPDIHAYSILAKGYVRSGQPGKAEALLTSMRKYGLQPNVVIFTTIISGW 192
Query: 289 YKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEAKGVIKTLIGKGFAFDE 348
K+ AV +M E G N+ T+ L+ G+ + +A+ ++ T+ +G A +
Sbjct: 193 CTAGKMDRAVRLHEKMHEMGIPSNLKTYETLMWGYGEAKQPWKAEELLVTMEERGVAPEM 372
Query: 349 KAVRVFLD 356
+++ D
Sbjct: 373 STMQLVAD 396
>TC19987 weakly similar to UP|Q7XJT3 (Q7XJT3) At2g17140 protein, partial
(12%)
Length = 350
Score = 47.0 bits (110), Expect = 5e-06
Identities = 25/74 (33%), Positives = 37/74 (49%)
Frame = +3
Query: 213 AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSN 272
+++ GL G E L MRE+G PDI Y V+ + K +DA + +M
Sbjct: 120 SLILGLGSKGQIFEMYGLMDEMRERGICPDICTYNNVISCLCEGGKTEDATSLLHEMLDK 299
Query: 273 SISPNAFSYTVLIQ 286
ISPN S+ +LI+
Sbjct: 300 GISPNISSFKILIK 341
>AV771187
Length = 484
Score = 33.1 bits (74), Expect = 0.078
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Frame = -2
Query: 276 PNAFSYTVLIQG------LYKCSK-----LHDAVEFCVEMLEAGHSLNVTTFVGLVDGFC 324
P+AF+YT+LI L C K L++A ML G +V T++ L+DG C
Sbjct: 429 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYMPLIDGCC 250
Query: 325 KENGIEEAKGVI 336
K E+ V+
Sbjct: 249 KTLSYPESS*VV 214
Score = 32.7 bits (73), Expect(2) = 9e-06
Identities = 16/79 (20%), Positives = 38/79 (47%), Gaps = 1/79 (1%)
Frame = -3
Query: 255 KAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSL-NV 313
+ ++ A+ +F M+ +PN +Y LI+ +++ AVE +M H + +
Sbjct: 248 RRYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS 69
Query: 314 TTFVGLVDGFCKENGIEEA 332
+++ ++ C+ + EA
Sbjct: 68 SSYTPIIHALCEAGRVAEA 12
Score = 32.7 bits (73), Expect(2) = 9e-06
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 226 EALKLFGLMREKGTIPDIVIYTAVVDGYTK 255
EA +LF LM KG +PD+V Y ++DG K
Sbjct: 336 EAGRLFRLMLFKGFVPDVVTYMPLIDGCCK 247
Score = 26.9 bits (58), Expect = 5.6
Identities = 15/52 (28%), Positives = 26/52 (49%), Gaps = 3/52 (5%)
Frame = -2
Query: 194 DADAIFNKMKETGLIPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPD 242
+A +F M G +P+ V ++DG CK ++ E+ + EKG P+
Sbjct: 336 EAGRLFRLMLFKGFVPDVVTYMPLIDGCCKTLSYPESS*VV*GYEEKGVCPE 181
>AV770033
Length = 298
Score = 45.8 bits (107), Expect = 1e-05
Identities = 19/66 (28%), Positives = 35/66 (52%)
Frame = -1
Query: 241 PDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEF 300
P ++ Y V+ G +K H+ DAI + M PN +YT+L++G+ DA+E
Sbjct: 274 PSVISYNIVLLGLSKVHRISDAIEVLAAMVDKGCRPNETTYTLLVEGIGYAGWPDDAMEL 95
Query: 301 CVEMLE 306
+ +++
Sbjct: 94 AISLVD 77
Score = 41.6 bits (96), Expect = 2e-04
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = -1
Query: 269 MQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDG 322
M+S+ P+ SY +++ GL K ++ DA+E M++ G N TT+ LV+G
Sbjct: 295 MESSVYQPSVISYNIVLLGLSKVHRISDAIEVLAAMVDKGCRPNETTYTLLVEG 134
Score = 31.6 bits (70), Expect = 0.23
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -1
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRI 265
+L GL K +A+++ M +KG P+ YT +V+G A DDA+ +
Sbjct: 250 VLLGLSKVHRISDAIEVLAAMVDKGCRPNETTYTLLVEGIGYAGWPDDAMEL 95
>BP039174
Length = 564
Score = 45.1 bits (105), Expect = 2e-05
Identities = 33/125 (26%), Positives = 58/125 (46%)
Frame = -2
Query: 213 AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSN 272
A+L + GN + A ++F ++ G IPD I V+ Y A +++ A F M+
Sbjct: 545 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 366
Query: 273 SISPNAFSYTVLIQGLYKCSKLHDAVEFCVEMLEAGHSLNVTTFVGLVDGFCKENGIEEA 332
I P ++ K SKL+ A+EF +++ + G + L F K +EE
Sbjct: 365 GIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRKLGVVEEV 186
Query: 333 KGVIK 337
+ V++
Sbjct: 185 ELVLR 171
>BP040806
Length = 534
Score = 45.1 bits (105), Expect = 2e-05
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 4/124 (3%)
Frame = +1
Query: 188 QESMPQDADAIFNKMKETGLIPNA---VAMLDGLCKDGNFQEALKLFGLMREKGTI-PDI 243
+ P A +F M E G P+ A+L C+ EA + M+ PD+
Sbjct: 124 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 303
Query: 244 VIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVE 303
Y+ ++ A K D ++ M + SI PN + +++ G K K +
Sbjct: 304 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 483
Query: 304 MLEA 307
MLE+
Sbjct: 484 MLES 495
>AV425299
Length = 323
Score = 44.3 bits (103), Expect = 3e-05
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 211 AVAMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQ 270
A A++ CK GN + A + F ++ KG PDI +Y +++ GY A + +KM+
Sbjct: 36 ASALVHLYCKVGNLERAKEAFEVLTRKGFQPDIKVYNSMIMGYVNAGDPKAGESLMKKME 215
Query: 271 S-NSISPNAFSYTVLIQ 286
I P YT L++
Sbjct: 216 ERGGIKPTKEIYTALLR 266
Score = 28.1 bits (61), Expect = 2.5
Identities = 15/39 (38%), Positives = 20/39 (50%)
Frame = +3
Query: 311 LNVTTFVGLVDGFCKENGIEEAKGVIKTLIGKGFAFDEK 349
L+ +T LV +CK +E AK + L KGF D K
Sbjct: 21 LDASTASALVHLYCKVGNLERAKEAFEVLTRKGFQPDIK 137
>BI418759
Length = 543
Score = 43.5 bits (101), Expect = 6e-05
Identities = 31/108 (28%), Positives = 48/108 (43%), Gaps = 14/108 (12%)
Frame = +2
Query: 176 RAVNSSNFNQPAQESMP----QDADAIFNKMKETGLIPNAVA----------MLDGLCKD 221
+AVNS FN E +A A F K G N+ A ++ C++
Sbjct: 221 QAVNSDTFNIMVNECFNLGKFHEALATFRK---AGTKSNSKAFAMDVAGYNNIISRFCEN 391
Query: 222 GNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKM 269
G EA LF + K PD+ + ++D Y K + DDA+++F +M
Sbjct: 392 GLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 535
>BP047039
Length = 527
Score = 42.7 bits (99), Expect = 1e-04
Identities = 19/56 (33%), Positives = 32/56 (56%)
Frame = -3
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKM 269
M++GLCK+G F EAL L M + G I D + + ++ + + D A ++ R+M
Sbjct: 477 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 310
>AV767495
Length = 586
Score = 41.2 bits (95), Expect = 3e-04
Identities = 30/116 (25%), Positives = 54/116 (45%), Gaps = 4/116 (3%)
Frame = +2
Query: 213 AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSN 272
A++D LCK+G + ++ L M EKG P++V Y +++D + + + + + +
Sbjct: 44 ALIDALCKNGLVESSMVLLDAMIEKGIRPNVVTYNSIIDAFGQLSALECGVDTSVQANEH 223
Query: 273 SISPNAFSYTVLIQGLYK---CSKLHDAVEFCVEMLEAGHSLNVTTFV-GLVDGFC 324
+ P S ++LI G + K D + E L A S + + G D FC
Sbjct: 224 RVVP---SSSMLIDGALQNLAIGKEDDRIMKMFEQLAAEKSGQIKKDMRGSQDKFC 382
Score = 32.3 bits (72), Expect = 0.13
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 242 DIVIYTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFC 301
D+V Y+A++D K + ++ + M I PN +Y +I + S L V+
Sbjct: 26 DVVFYSALIDALCKNGLVESSMVLLDAMIEKGIRPNVVTYNSIIDAFGQLSALECGVDTS 205
Query: 302 VEMLE 306
V+ E
Sbjct: 206 VQANE 220
Score = 29.3 bits (64), Expect = 1.1
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 265 IFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEM 304
+FRKM I PN +++ ++ C DA + E+
Sbjct: 392 LFRKMHEMEIKPNVVTFSAILNACSNCKSFEDASKLLDEL 511
>BP042555
Length = 510
Score = 39.3 bits (90), Expect = 0.001
Identities = 19/68 (27%), Positives = 35/68 (50%)
Frame = +3
Query: 214 MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIRIFRKMQSNS 273
++ G C+ F+EA+ + M ++G PD+ Y ++ G+ + K A + KM
Sbjct: 306 LIHGYCRVDRFKEAVGILRDMAKRGXSPDVDTYYPLICGFCQTGKLGKAFEMKAKMVHKG 485
Query: 274 ISPNAFSY 281
I P+A +Y
Sbjct: 486 ILPDADTY 509
>BP042107
Length = 515
Score = 38.5 bits (88), Expect = 0.002
Identities = 33/144 (22%), Positives = 61/144 (41%), Gaps = 22/144 (15%)
Frame = +1
Query: 167 EASSQLEEARAVNSSNFNQ-------------PAQESMPQ------DADAIFNKMKETGL 207
+++S + E A++SS+ + P+ S+P DA + FN+M +
Sbjct: 67 QSTSHINENAAMSSSSLFRLTRFPILSNPTFLPSFHSVPHSFHNVDDAVSFFNRMLQMHP 246
Query: 208 IPNAVA---MLDGLCKDGNFQEALKLFGLMREKGTIPDIVIYTAVVDGYTKAHKADDAIR 264
P+ + +L L K ++ A+ L M KG PDIV + +++ Y + A
Sbjct: 247 TPSIIEFSMILTSLVKMKHYSTAISLSHQMELKGIRPDIVTSSILINCYCHLGQLTSAFS 426
Query: 265 IFRKMQSNSISPNAFSYTVLIQGL 288
+ + PN L++GL
Sbjct: 427 VMGNILKRGYQPNTIILNTLMKGL 498
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.317 0.136 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,992,465
Number of Sequences: 28460
Number of extensions: 55402
Number of successful extensions: 347
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of query: 379
length of database: 4,897,600
effective HSP length: 92
effective length of query: 287
effective length of database: 2,279,280
effective search space: 654153360
effective search space used: 654153360
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Medicago: description of AC147178.7