BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147013.3 + phase: 0
(380 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14800 weakly similar to UP|Q9FHP3 (Q9FHP3) Genomic DNA, chromo... 108 1e-24
TC8398 weakly similar to UP|Q84KK1 (Q84KK1) S haplotype-specific... 69 2e-23
TC19187 80 7e-20
BI419994 88 3e-18
BG662160 84 4e-17
BP052653 79 2e-15
TC9055 76 8e-15
AW720409 72 2e-13
BP076687 69 1e-12
AV768207 65 2e-11
BP035281 63 7e-11
AV427033 63 9e-11
AV423520 62 2e-10
TC15119 61 4e-10
TC18972 61 4e-10
CB826914 60 5e-10
TC18730 similar to UP|Q963J2 (Q963J2) Voltage-dependent calcium ... 60 8e-10
AV414925 60 8e-10
BP051299 59 1e-09
AI967453 59 2e-09
>TC14800 weakly similar to UP|Q9FHP3 (Q9FHP3) Genomic DNA, chromosome 5, TAC
clone:K14B20, partial (7%)
Length = 782
Score = 108 bits (270), Expect = 1e-24
Identities = 80/241 (33%), Positives = 119/241 (49%), Gaps = 18/241 (7%)
Frame = +3
Query: 27 LPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQ--------LV 78
LP+ELI+ IL LPV+SLL+F+ V K+WK+ SD F H L + L+
Sbjct: 48 LPDELIIEILSWLPVKSLLQFRVVSKTWKSFISDPQFVKLHLLHRLSFRNADFEHTSLLI 227
Query: 79 ACESVSAYRTWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILGSCNGFLCL----YD-- 132
C + R + I + + SLLE+ S V S + Y +G+CNG + L YD
Sbjct: 228 KCHTDDFGRPY-ISSRTVSSLLESPSAIV--ASRSCISGYDFIGTCNGLVSLRKLNYDES 398
Query: 133 --NYQRCVRLWNPSINLKSKSSPT--IDRFIYYGFGYDQVNHKYKLLAVKAFSRITETMI 188
N VR WNP+ S+ SP R ++ GFGYD + YK++ + +T +
Sbjct: 399 NTNNFSQVRFWNPATRTMSQDSPPSWSPRNLHLGFGYDCSSDTYKVVGM--IPGLTMVNV 572
Query: 189 YTFGENSCKNVEVKDFPRYPPNRKHLGKFVSGTLNWIVDERDGRATILSFDIEKETYRQV 248
Y G+N + +++ P P + + +VS TLNW+ I+SFD+EKE Q
Sbjct: 573 YNMGDNCWRTIQIS--PHAPMHLQGSAVYVSNTLNWLAGTNP--YFIVSFDLEKEECAQQ 740
Query: 249 L 249
L
Sbjct: 741 L 743
>TC8398 weakly similar to UP|Q84KK1 (Q84KK1) S haplotype-specific F-box
protein a, partial (9%)
Length = 1602
Score = 69.3 bits (168), Expect(2) = 2e-23
Identities = 58/220 (26%), Positives = 95/220 (42%), Gaps = 55/220 (25%)
Frame = +3
Query: 11 STLPVAETTANKPLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHF------- 63
+T P P P L +ELI IL LPV+SL+RF+CVCKSWK S+ F
Sbjct: 30 ATPPTLVADTEPPPPILIDELIWEILSLLPVKSLVRFRCVCKSWKLTISNPQFMKLHLRR 209
Query: 64 ---------ANNHFLISTVYPQLVACESVSAYRTWEIKTY------PIESLLENSSTTVI 108
A++ ++ T + +S + +T+ P+ +L E + +
Sbjct: 210 SSAKAAADFADSQVVVMTKRDHIAHSPLLSKFHIVHDETFTADEPWPVHALREPFNQPHV 389
Query: 109 PVSNT-------------GHQRYTILGSCNGFLCL----YDNYQRCVRL----WNPSINL 147
+ GH R ++G+CNG + + Y++ + +L NP+ L
Sbjct: 390 SICYAPSLFSSQNNDKLKGHCR--LIGACNGLVSVINEGYNSAESATKLSCCNLNPATKL 563
Query: 148 KSKSSPTIDR------------FIYYGFGYDQVNHKYKLL 175
+S+ SPT+ F +GFGYD +N YK++
Sbjct: 564 RSQVSPTLSLCYKQFHSLIHSVFRIFGFGYDPLNDTYKVV 683
Score = 56.2 bits (134), Expect(2) = 2e-23
Identities = 53/206 (25%), Positives = 93/206 (44%), Gaps = 15/206 (7%)
Frame = +1
Query: 188 IYTFGENSCKNVEVKDFPRYPPNRKHLGK---------FVSGTLNWIVDERDGRATILSF 238
+Y G+ + ++ FP + R+H G+ +++GT+NW++ + I+S
Sbjct: 739 VYNMGDGCWRRIQ--SFPDF--TREHWGRGTAPDQNGVYLNGTINWVL-RLNIAYDIISL 903
Query: 239 DIEKETYRQVLLP----QHGYAVYS--PGLYVLSNCICVCTSFLDTRWQLWMMKKYGVAE 292
D+ E ++ LP VY P L VL + +CV + D + +W M ++G E
Sbjct: 904 DLGSEVCSRLSLPCFPPPGPKCVYDLPPILGVLKDSLCVLHNNNDKTFVIWKMNEFGAHE 1083
Query: 293 SWTKLMSIPHENLLISNISLWPCVEPLFISENGVVLLMNTSSSQLILYNLNSRGLYFPRI 352
SWT L + + + + F SEN VLLM + +LYN + F
Sbjct: 1084SWTPLFNFDFKKEDLYRF------DKFFFSENDEVLLMTLTKQ--VLYNHSDITFKFNDR 1239
Query: 353 PPSYLNIYYIEPKLDLHIYHESLLSP 378
+Y++ + ++ Y ESL+SP
Sbjct: 1240VHNYIHDWN-----NIENYVESLVSP 1302
>TC19187
Length = 632
Score = 79.7 bits (195), Expect(2) = 7e-20
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Frame = +1
Query: 215 GKFVSGTLNWIVDERDGRAT---ILSFDIEKETYRQVLLPQHGYAVYS-PGLYVLSNCIC 270
GKFVSGTLNW + G ++ I+S D++KETY+++L P + S P L VL C+C
Sbjct: 7 GKFVSGTLNWAANYSVGVSSLWIIVSLDLQKETYKEILPPDYEKEECSTPTLSVLKGCLC 186
Query: 271 VCTSFLDTRWQLWMMKKYGVAESWTKLMSIP 301
+ T + +WMMK YGV ESW KL++IP
Sbjct: 187 MNYDHKRTDFVVWMMKDYGVRESWVKLVTIP 279
Score = 33.9 bits (76), Expect(2) = 7e-20
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 318 PLFISENGVVLLMNTSSSQLILYNLNSRGLYFPRIPPSYLNIYYIEPKLDLHIYHESLLS 377
P FISENG VLLM L++Y+ + +PR+ + D +Y E+L+S
Sbjct: 317 PYFISENGEVLLM--FEFDLVMYDPRDQSFRYPRLESG-------KGWFDAEVYIETLIS 469
Query: 378 P 378
P
Sbjct: 470 P 472
>BI419994
Length = 549
Score = 87.8 bits (216), Expect = 3e-18
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Frame = +2
Query: 14 PVAETTANKPLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTV 73
P T + LP+ELI+ ILLRLPVRSLLRFK VCKSW+ L SD F +HF ++
Sbjct: 8 PQTSTESLSLFSHLPDELILQILLRLPVRSLLRFKTVCKSWRYLISDPQFTKSHFNLAAS 187
Query: 74 YPQLVACESVSAYRTWEIKTYPIESLLENSSTTV------IPVSNTGHQ------RYTIL 121
+ + + + I++ +S L + S+ V P H+ +L
Sbjct: 188 PTHRIFLNNTNGF---*IESLDTDSSLHDESSLVHLKFPLAPPHPDNHRFGSSVTGLKVL 358
Query: 122 GSCNGFLCLYDNYQRCVRLWNPSINLKSK-----SSPTIDRFIYYGFGYDQVNHKYKLLA 176
GSC GF+ L N+Q V +WNPS ++ + S YG GYD+ N Y ++
Sbjct: 359 GSCRGFV-LLANHQGNVVVWNPSTGVRRRVPEWCSYLASQCEFLYGIGYDESNDDYLVVF 535
Query: 177 VKA 179
+++
Sbjct: 536 IES 544
>BG662160
Length = 445
Score = 84.0 bits (206), Expect = 4e-17
Identities = 56/152 (36%), Positives = 78/152 (50%), Gaps = 11/152 (7%)
Frame = +2
Query: 26 FLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACESVSA 85
FLPEEL + IL LPV+SL+RF+CV KSWK++ SD+ F H ++ +
Sbjct: 20 FLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLH-----LHRSSSTTRNTDF 184
Query: 86 YRTWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILGSCNGFLCLY-------DNYQRCV 138
+ T P +S ++ST IP Y G+CNG +CL+ D Y V
Sbjct: 185 AYLQSLITSPRKS--RSASTIAIP------DDYDFCGTCNGLVCLHSSKYDRKDKYTSHV 340
Query: 139 RLWNPSINLKSKSSPTIDRFI----YYGFGYD 166
RLWNP++ S+ SP + I Y+GF YD
Sbjct: 341 RLWNPAMRSMSQRSPPLYLPIVYDSYFGFDYD 436
>BP052653
Length = 552
Score = 78.6 bits (192), Expect = 2e-15
Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Frame = +1
Query: 27 LPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACESVSAY 86
LP +LIV ILLRLPVRSLLRFK VCKSW +L SD F +HF ++ +
Sbjct: 187 LPHDLIVQILLRLPVRSLLRFKSVCKSWLSLISDPQFGKSHFDLAAAPTH----RCLVKI 354
Query: 87 RTWEIKTYPIE-SLLENSSTTVIPVSNTGHQRY--TILGSCNGFLCLYDNYQRCVRLWNP 143
+++++ ++ S+L+ SS + TG+ + ILGSC GF+ L V WNP
Sbjct: 355 NNFKLESLDVDASVLDQSSEVNLKFPYTGYVIFHIQILGSCRGFIALVRGGDAIV--WNP 528
Query: 144 SINLKSK 150
S ++ K
Sbjct: 529 SXCVQRK 549
>TC9055
Length = 577
Score = 76.3 bits (186), Expect = 8e-15
Identities = 47/164 (28%), Positives = 86/164 (51%), Gaps = 5/164 (3%)
Frame = +2
Query: 220 GTLNWIVDERDG--RATILSFDIEKETYRQVLLPQHGYAVYSPGLYVLSNCICVCTSFLD 277
G +NW+ ++ + + I+S D+ +E YR + LPQ + S + VL NC+C+ F
Sbjct: 2 GCVNWLANKFEPFEQLVIVSLDMRQEAYRLLSLPQGTSELPSAEIQVLGNCLCLFYDFKR 181
Query: 278 TRWQLWMMKKYGVAESWTKLMSIPHENLLISN---ISLWPCVEPLFISENGVVLLMNTSS 334
T + W M +YG+ ESWT L++I +E+L + ++ W + + +G + ++
Sbjct: 182 THFVAWKMSEYGLPESWTPLLTISYEHLRWDHRFYLNQW----LICLCGDGHIFMLAKKQ 349
Query: 335 SQLILYNLNSRGLYFPRIPPSYLNIYYIEPKLDLHIYHESLLSP 378
+I+YNL+ + + + + L LD + Y ESL+SP
Sbjct: 350 KLVIIYNLSDNSVKYVELASNKL-------WLDANDYVESLVSP 460
>AW720409
Length = 575
Score = 72.0 bits (175), Expect = 2e-13
Identities = 53/158 (33%), Positives = 78/158 (48%), Gaps = 18/158 (11%)
Frame = +3
Query: 27 LPEELIVIILLRLPVRSLLRFKCVCKSWKTL-FSDTHFANNHFLISTV-YPQLVACESVS 84
LP EL + IL LPV++L+RF CV KSWK+L + D F H S Q++
Sbjct: 93 LPFELWIEILSWLPVKTLMRFSCVSKSWKSLIYQDRDFKKLHLDRSPKNNNQVILTLQKP 272
Query: 85 AYRTWEIKTYPIESLL---ENSSTTV---IPVSNTGHQR----YTILGSCNGFLCLY--D 132
+ +P+ LL E SS+++ IP + +GSCNG +CLY +
Sbjct: 273 LFSGRTFFPFPVRRLLQDQEPSSSSIIDDIPFEEEDEDEEDNYHDTIGSCNGLVCLYGIN 452
Query: 133 NYQRCVRLWNPSINLKSKSSPTIDRFI----YYGFGYD 166
++ RLWNP+ + SP +D I ++ FGYD
Sbjct: 453 DHGLWFRLWNPATRFRFHKSPPLDAVIGSTLHFAFGYD 566
>BP076687
Length = 389
Score = 69.3 bits (168), Expect = 1e-12
Identities = 50/129 (38%), Positives = 69/129 (52%), Gaps = 11/129 (8%)
Frame = -3
Query: 27 LPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACESVSAY 86
LPEELI ILLRLPVRSLLRFK VCKSW +L SD F +H+ ++ C +++
Sbjct: 381 LPEELIPQILLRLPVRSLLRFKSVCKSWLSLISDPKFGKSHYDLAA--SPTYRCLTIA-- 214
Query: 87 RTWEIKTYPIESLLENSSTTVI----------PVSNTGHQRYTILGSCNGF-LCLYDNYQ 135
EI + +++ L N ++V+ +S LG C GF + +Y+ Q
Sbjct: 213 NDSEIGSIDVDAPLLNYESSVVKLKYPLPPPCKLSLFSGNTVWFLGYCRGFVIVVYE--Q 40
Query: 136 RCVRLWNPS 144
V LWNPS
Sbjct: 39 GDVFLWNPS 13
>AV768207
Length = 374
Score = 64.7 bits (156), Expect = 2e-11
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +1
Query: 23 PLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLIST 72
P P LP EL V IL RLPV+SLL+ +CVCKSWK+L SD FA NH S+
Sbjct: 61 PFPTLPFELGVEILCRLPVKSLLQLRCVCKSWKSLISDPKFAKNHLRCSS 210
>BP035281
Length = 498
Score = 63.2 bits (152), Expect = 7e-11
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Frame = +2
Query: 28 PEELIVIILLRLPVRSLLRFKCVCKSWKTLFSD-----------THFANNHFLISTVYPQ 76
P EL++ IL LPV SL+RFKCVCKSWK+L S T NH ++++
Sbjct: 125 PSELVIEILSWLPVLSLIRFKCVCKSWKSLISHNKAFAKLQLERTSLKINHVILTSSDSS 304
Query: 77 LVACESVSAYRTWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILGSCNGFLCLYDNYQR 136
+ C S R E + S+++ + + + ++GSCNG +CL+ +Y
Sbjct: 305 FIPC---SLPRLLEDPS----SIMDQDQDRCLRLDKFEYNE--VIGSCNGLICLHADYCA 457
Query: 137 ---CVRLWNPS 144
C R NPS
Sbjct: 458 PGFCFRPCNPS 490
>AV427033
Length = 420
Score = 62.8 bits (151), Expect = 9e-11
Identities = 30/54 (55%), Positives = 37/54 (67%)
Frame = +1
Query: 14 PVAETTANKPLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNH 67
P ++ PLPF +L+V IL RLPV SLL+F+CVCKSW +L SD FA NH
Sbjct: 94 PAGDSLHAPPLPF---DLVVEILCRLPVNSLLQFRCVCKSWNSLISDPKFAKNH 246
>AV423520
Length = 468
Score = 62.0 bits (149), Expect = 2e-10
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +3
Query: 23 PLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFS-DTHFANNHFLIS 71
PLP LP EL+V IL RLPV+SLL+F+CVCKSW +L S D FA H S
Sbjct: 153 PLPTLPFELVVEILCRLPVKSLLQFRCVCKSWNSLISGDPKFARKHLRCS 302
>TC15119
Length = 520
Score = 60.8 bits (146), Expect = 4e-10
Identities = 40/86 (46%), Positives = 50/86 (57%)
Frame = +3
Query: 260 PGLYVLSNCICVCTSFLDTRWQLWMMKKYGVAESWTKLMSIPHENLLISNISLWPCVEPL 319
P L +L NC+C C FL T WQ M+K+GV ESWT+L L I+NI L PL
Sbjct: 42 PTLVILKNCLCACHEFLVTVWQ---MEKFGVRESWTQL-------LKITNIHL--NAVPL 185
Query: 320 FISENGVVLLMNTSSSQLILYNLNSR 345
+SEN VVLL S S+ I ++ N R
Sbjct: 186 CMSENDVVLL---SKSERIFFHWNHR 254
>TC18972
Length = 391
Score = 60.8 bits (146), Expect = 4e-10
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Frame = +2
Query: 269 ICVCTSFLDTRWQLWMMKKYGVAESWTKLMSIPHENLLISNISLWPCVEPLFISENGVVL 328
+C+C D LW + YG+ ESW+KL+SIP + I + + PL ISENG+VL
Sbjct: 2 LCLCY-LNDMHCVLWSINMYGIQESWSKLISIPRCK-IXGPIGAFLHIRPLCISENGLVL 175
Query: 329 LMNTSSS---QLILYNLNSRGLYFPRIPPSYLNIYYIEPKLDLHIYHESLLSP 378
+ S QL++YN + L +P I S N +Y + ++IYHES +SP
Sbjct: 176 MEVDSDHFKLQLVMYNAVNGKLDYPEI-MSPGNRHY---RHYMYIYHESSVSP 322
>CB826914
Length = 575
Score = 60.5 bits (145), Expect = 5e-10
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Frame = +1
Query: 27 LPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACESVSAY 86
+ +LI+ ILL LPV+S++RFK VCK W++L SD FA+ HF P L+ +S A
Sbjct: 166 MDRDLIIEILLMLPVKSIVRFKAVCKLWRSLISDPLFASLHF--QRAAPSLLFADS-HAI 336
Query: 87 RTWEIKTYPIESLLENSSTTVIPVSN-----TGHQRYTILGSCNGFLCL-------YDN- 133
RT +++ P++S + +SN +I GSC GFL + Y +
Sbjct: 337 RTIDLEG-PLQSHRVSQPINCHFLSNYHDLSLPRNCISIHGSCRGFLLITWISNIGYGHP 513
Query: 134 YQRCVRLWNPSINL 147
+ + LWNPS ++
Sbjct: 514 WNDSLYLWNPSTHV 555
>TC18730 similar to UP|Q963J2 (Q963J2) Voltage-dependent calcium channel
alpha13 subunit (Fragment), partial (5%)
Length = 515
Score = 59.7 bits (143), Expect = 8e-10
Identities = 30/47 (63%), Positives = 35/47 (73%)
Frame = +2
Query: 25 PFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLIS 71
P +ELI+ ILLRLPVRSLLRFK VCKSW +L SD F +H+ IS
Sbjct: 215 PISLKELILHILLRLPVRSLLRFKSVCKSWLSLISDPKFGXSHYDIS 355
>AV414925
Length = 414
Score = 59.7 bits (143), Expect = 8e-10
Identities = 39/109 (35%), Positives = 53/109 (47%), Gaps = 5/109 (4%)
Frame = +1
Query: 27 LPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYP-----QLVACE 81
+P E+I IL RLPV SLLRF+ + KSW++L HF H S P L+
Sbjct: 97 IPVEVIADILSRLPVTSLLRFRSISKSWRSLIDSKHFMKLHLNNSLTNPNPNLTNLILRH 276
Query: 82 SVSAYRTWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILGSCNGFLCL 130
+ YR +P N + ++ SN R ILGSC+G LC+
Sbjct: 277 NTDLYRA----DFPSIGAAVNLNHPLMCYSN----RINILGSCHGLLCI 399
>BP051299
Length = 539
Score = 58.9 bits (141), Expect = 1e-09
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Frame = +2
Query: 27 LPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACESVSAY 86
LP+E+ IL RLP ++L++ VCKSW++L + T F + H S L C+ +
Sbjct: 5 LPQEIWAEILHRLPPKTLVKCTSVCKSWRSLITSTSFISLHRNHSPSSLLLQLCDERAIP 184
Query: 87 RTWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILGSCNGFLCLYDNYQ-RCVRLWNPSI 145
+ L SS+ +P ++ ++ ++++G C+G +C+ R + + NPS+
Sbjct: 185 NFIHYSLRRDDPFLSESSSLRLP--SSFNREFSVVGICHGLVCITSTENCRDLIICNPSL 358
Query: 146 NL-----KSKSSPTIDRFIYYGFGYDQVNHKYKLLAV 177
L + P++ FG+D N+ YK++ +
Sbjct: 359 RLHITLPEPSDYPSL-HSASVAFGFDSRNNDYKVIRI 466
>AI967453
Length = 456
Score = 58.5 bits (140), Expect = 2e-09
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 31 LIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHF 68
LI ILLRLPV+SL+RFK VCK W++L SD HFA +HF
Sbjct: 16 LITEILLRLPVKSLVRFKAVCKFWRSLISDPHFATSHF 129
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.138 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,475,535
Number of Sequences: 28460
Number of extensions: 144350
Number of successful extensions: 896
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of query: 380
length of database: 4,897,600
effective HSP length: 92
effective length of query: 288
effective length of database: 2,279,280
effective search space: 656432640
effective search space used: 656432640
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Medicago: description of AC147013.3