TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146866.12 + phase: 0 
         (273 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC16594 similar to GB|AAG38144.1|21700765|AY004240 phosphoglycer...   258  8e-70
AV422598                                                              231  1e-61
TC11436 similar to GB|AAG38145.1|21700767|AY004241 phosphoglycer...   206  3e-54
BP034532                                                              182  7e-47
TC16525 similar to GB|AAG38145.1|21700767|AY004241 phosphoglycer...   125  1e-29
TC17150 similar to UP|Q9FPW6 (Q9FPW6) POZ/BTB containing-protein...    28  1.3
AV407706                                                               28  1.7
TC18033                                                                28  2.2
TC19227                                                                27  2.9
BP039065                                                               26  8.3
TC17561                                                                26  8.3

>TC16594 similar to GB|AAG38144.1|21700765|AY004240 phosphoglycerate
           mutase-like protein {Glycine max;} , partial (56%)
          Length = 578

 Score =  258 bits (659), Expect = 8e-70
 Identities = 119/166 (71%), Positives = 142/166 (84%)
 Frame = +1

Query: 1   MDTAPGQSLYPLHHSKTIHLVRHAQGVHNVEGEKNHDAYLSYDFFDANLTPLGWQQVENL 60
           MD    Q LYPLH SKT+HLVRHAQG HNV GEK+ +AYLSYD+ DA+LTPLGW QV+NL
Sbjct: 79  MDANVSQGLYPLHRSKTLHLVRHAQGFHNVAGEKDPEAYLSYDYLDASLTPLGWNQVDNL 258

Query: 61  QKHVKAIGLSKKIELVVVSPLLRTMQTAVGVFGGEANTDGVNKPPLMIENVGHSDHPAVS 120
           ++HVK+ GLSK IELV+ SPL RTMQTAVGVFGGEA+TDG++ PPLMI+N G S  PA+S
Sbjct: 259 REHVKSSGLSKGIELVITSPLTRTMQTAVGVFGGEASTDGIDSPPLMIDNAGDSARPAIS 438

Query: 121 SLNCPPFVAVELCREQMGLHPCDKRRTVSEYRHMFPGIDFSLIETD 166
           SLN PPF+AVELCRE +G+HPCDKRR+++EYR++FP IDFSLIE D
Sbjct: 439 SLNSPPFLAVELCREHLGVHPCDKRRSITEYRNIFPAIDFSLIEID 576


>AV422598 
          Length = 475

 Score =  231 bits (589), Expect = 1e-61
 Identities = 109/135 (80%), Positives = 121/135 (88%)
 Frame = +1

Query: 1   MDTAPGQSLYPLHHSKTIHLVRHAQGVHNVEGEKNHDAYLSYDFFDANLTPLGWQQVENL 60
           MD+A GQ LYPLHH KT+HLVRHAQGVHNVEGEKNHDAYLS D FDA+LTPLGW QV+NL
Sbjct: 70  MDSAAGQILYPLHHCKTVHLVRHAQGVHNVEGEKNHDAYLSNDLFDAHLTPLGWNQVDNL 249

Query: 61  QKHVKAIGLSKKIELVVVSPLLRTMQTAVGVFGGEANTDGVNKPPLMIENVGHSDHPAVS 120
           +KHVK  GLS+ +ELVVVSPLLRTMQTAVGVFGGE  +DG+N+PPLMIE+VG SDHPAVS
Sbjct: 250 RKHVKGHGLSRSVELVVVSPLLRTMQTAVGVFGGEIYSDGINEPPLMIESVGSSDHPAVS 429

Query: 121 SLNCPPFVAVELCRE 135
           SLNCP F+A ELCRE
Sbjct: 430 SLNCPLFIAKELCRE 474


>TC11436 similar to GB|AAG38145.1|21700767|AY004241 phosphoglycerate
           mutase-like protein {Glycine max;} , partial (35%)
          Length = 632

 Score =  206 bits (525), Expect = 3e-54
 Identities = 95/115 (82%), Positives = 104/115 (89%)
 Frame = +3

Query: 159 DFSLIETDDDTWWKPEREKKEEVTGRGLKFLEWLCTRKEKEIAVVTHSSFLFNTLSAFGN 218
           DFSL+ETD+DT W PEREKKE V  RGLKFLEWL TRKEKEIAVVTHSSFLFNTLSAFGN
Sbjct: 3   DFSLVETDEDTLWAPEREKKEAVAARGLKFLEWLSTRKEKEIAVVTHSSFLFNTLSAFGN 182

Query: 219 DCHPNIKTEMCAHFANCELRSMVIVDKCMIGSNNSTTNYPGKIPHGPDLPSDATD 273
           DCHPNIK+E+C HFANCELRSMVI+D+ +IGSN STTNYPGKIP GPDLPS++ D
Sbjct: 183 DCHPNIKSEICKHFANCELRSMVIIDRGVIGSNESTTNYPGKIPRGPDLPSESAD 347


>BP034532 
          Length = 533

 Score =  182 bits (461), Expect = 7e-47
 Identities = 87/131 (66%), Positives = 105/131 (79%), Gaps = 1/131 (0%)
 Frame = -3

Query: 144 KRRTVSEYRHMFPGIDFSLIETDDDTWWKPE-REKKEEVTGRGLKFLEWLCTRKEKEIAV 202
           +RR+VSEY+ +FP +DFSLIE+D+D WW+ + RE KEE+  RG KF+ WL TRKEKEIA+
Sbjct: 531 RRRSVSEYQFLFPAVDFSLIESDEDVWWEADVRETKEELAARGQKFMNWLWTRKEKEIAI 352

Query: 203 VTHSSFLFNTLSAFGNDCHPNIKTEMCAHFANCELRSMVIVDKCMIGSNNSTTNYPGKIP 262
           VTHS FL +TL+A  NDC P +K E+  HFANCELRSMVIVD+ MIGS  STTNYPGKIP
Sbjct: 351 VTHSGFLSHTLNAITNDC-PLMKKEISKHFANCELRSMVIVDRGMIGSETSTTNYPGKIP 175

Query: 263 HGPDLPSDATD 273
            GPDLPS+  D
Sbjct: 174 SGPDLPSEVAD 142


>TC16525 similar to GB|AAG38145.1|21700767|AY004241 phosphoglycerate
           mutase-like protein {Glycine max;} , partial (30%)
          Length = 502

 Score =  125 bits (313), Expect = 1e-29
 Identities = 55/76 (72%), Positives = 66/76 (86%)
 Frame = +3

Query: 198 KEIAVVTHSSFLFNTLSAFGNDCHPNIKTEMCAHFANCELRSMVIVDKCMIGSNNSTTNY 257
           KEIAVV+H+ FLF+ LSAFGNDCHP +K E+C HFANCELRSMVIVD+ +IGS++ ++NY
Sbjct: 3   KEIAVVSHTGFLFHALSAFGNDCHPTVKNEICTHFANCELRSMVIVDRGLIGSDDPSSNY 182

Query: 258 PGKIPHGPDLPSDATD 273
           PGKIPHG DLPSD  D
Sbjct: 183 PGKIPHGLDLPSDIAD 230


>TC17150 similar to UP|Q9FPW6 (Q9FPW6) POZ/BTB containing-protein AtPOB1,
           partial (28%)
          Length = 709

 Score = 28.5 bits (62), Expect = 1.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 228 MCAHFANCELRSMVIVDKCMIGSNNST 254
           +C+H A C LR  + +D+C     N T
Sbjct: 126 LCSHLAMCGLRHSICLDRCFFYQQNVT 206


>AV407706 
          Length = 428

 Score = 28.1 bits (61), Expect = 1.7
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = -1

Query: 190 EWLCTRKEKEIAVVTHSSFLFNTLSAFGNDCHPNIKTEMCAHFANCELRSMVIVDKCMIG 249
           +W+C  +    A+     F+ N+  +FG     N   +M  H A+C    +  +D+C+  
Sbjct: 419 KWICATESTYFAI----KFIKNSWDSFGRFIRNNDTVDML*HMASC----IFTLDQCLRF 264

Query: 250 SNNST 254
              ST
Sbjct: 263 QRTST 249


>TC18033 
          Length = 560

 Score = 27.7 bits (60), Expect = 2.2
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -3

Query: 7   QSLYPLHHSKTIH 19
           QSLYPLHHS T H
Sbjct: 396 QSLYPLHHSHTKH 358


>TC19227 
          Length = 410

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = -3

Query: 168 DTWWKPEREKKEEV-TGRGLKFL 189
           DT W+P +EKKEE+   + +KFL
Sbjct: 357 DTTWRPLKEKKEELGVQKSMKFL 289


>BP039065 
          Length = 564

 Score = 25.8 bits (55), Expect = 8.3
 Identities = 19/51 (37%), Positives = 25/51 (48%), Gaps = 6/51 (11%)
 Frame = +1

Query: 141 PCDKRRTVSEY--RHMFPGIDFSLIETDDDTWWKP----EREKKEEVTGRG 185
           P  +R TVS    R M  G+   ++       W+P    ER+K  EVTGRG
Sbjct: 307 PSQRRSTVSSSLCRLMVCGLGKIVLRRRQ*VSWRP*QL*ERKKGLEVTGRG 459


>TC17561 
          Length = 581

 Score = 25.8 bits (55), Expect = 8.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 220 CHPNIKTEMCAHFANC 235
           CHPN     C+HF  C
Sbjct: 191 CHPNCYCLTCSHFCGC 144


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.318    0.135    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,456,620
Number of Sequences: 28460
Number of extensions: 79347
Number of successful extensions: 389
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of query: 273
length of database: 4,897,600
effective HSP length: 89
effective length of query: 184
effective length of database: 2,364,660
effective search space: 435097440
effective search space used: 435097440
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)