BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146842.6 - phase: 0
(535 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor k... 42 2e-04
TC15694 weakly similar to UP|Q8W042 (Q8W042) Prenylated Rab rece... 40 7e-04
TC13802 similar to UP|Q9M1T1 (Q9M1T1) Sugar-phosphate isomerase-... 40 0.001
TC15560 similar to SP|Q03173|NDPP_MOUSE NPC derived proline rich... 40 0.001
TC9746 39 0.002
AW720177 39 0.002
TC8484 similar to UP|Q9XGP1 (Q9XGP1) ESTs AU070372(S13446), part... 39 0.002
TC14775 PIR|S14181|S14181 DNA-directed RNA polymerase largest c... 39 0.003
TC15257 similar to PIR|T39903|T39903 serine-rich protein - fissi... 38 0.004
TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, ... 38 0.004
TC12354 similar to UP|O23702 (O23702) Dehydrogenase, partial (25%) 38 0.005
AV416351 37 0.006
TC8595 similar to PIR|T09390|T09390 21K protein precursor - alfa... 37 0.006
TC8093 homologue to UP|EFTU_TOBAC (P41342) Elongation factor Tu,... 37 0.008
BP033767 37 0.008
BP036801 37 0.010
AV427017 36 0.014
TC16823 similar to UP|Q8LGA2 (Q8LGA2) Seed maturation-like prote... 36 0.018
TC19436 similar to UP|Q93Y06 (Q93Y06) Receptor protein kinase-li... 36 0.018
AV409790 35 0.023
>TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor kinase 1;1,
partial (16%)
Length = 486
Score = 42.4 bits (98), Expect = 2e-04
Identities = 42/146 (28%), Positives = 62/146 (41%), Gaps = 2/146 (1%)
Frame = +1
Query: 282 PSLPVVRMPSHGSSPSSLPFSRRHSWSYENCRASPPAVNYYSPSPTHSESHTLVSNASSQ 341
P P + P+H SPS+ P S PP+ + +P + S + S SS
Sbjct: 73 PPPPPSQQPTH--SPSTSPTSTT---------TPPPSPTKVTENPPTAPSTSTKSPTSSA 219
Query: 342 GYCPPSSLPPHPSEMSLLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTL--L 399
P PP+PS + K+ SP SPSPSP S+ P ++ S ++ L
Sbjct: 220 SEEPS---PPNPSTSTTQQPKHSP-----TSPPASPSPSPPSTKPPTAMASPSTSPLSAT 375
Query: 400 RSESAPVNIPNAEVTYSPGHTSRQNL 425
+S P P+A T P TS + +
Sbjct: 376 KSHPTPPAAPSASSTPPPTTTSLKTM 453
Score = 31.6 bits (70), Expect = 0.34
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 358 LLHKKNVNFDEYYPSPNFSPSPSPS-SSSPIYSLGSLASKTLLRSESAPVNIPNAEVTYS 416
LLH + + Y P P S P+ S S+SP + S T + N P A T +
Sbjct: 34 LLHTSSSSSSSYSPPPPPSQQPTHSPSTSPTSTTTPPPSPTKVTE-----NPPTAPSTST 198
Query: 417 PGHTSRQNLPPSTPIRISRCTSETERSRNLMQSCTTPEKMFSIGKESQKYSGGKIAPNSS 476
TS + PS P + TS T++ ++ S T+P S S K +P++S
Sbjct: 199 KSPTSSASEEPSPP---NPSTSTTQQPKH---SPTSPPASPSPSPPSTKPPTAMASPSTS 360
Query: 477 P 477
P
Sbjct: 361 P 363
>TC15694 weakly similar to UP|Q8W042 (Q8W042) Prenylated Rab receptor 2,
partial (46%)
Length = 458
Score = 40.4 bits (93), Expect = 7e-04
Identities = 38/122 (31%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Frame = +3
Query: 340 SQGYCPPSSLPPHPSEMSLLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTLL 399
S+ + PP HP S N + P+ P PS +SS + AS T
Sbjct: 81 SENHAPPC----HPHRHSPFPPPNPTTTPHNPNLRSQPQPSATSSLASPPPSAKASPTAA 248
Query: 400 RSESAPVNIPNAEVTYSP---------GHTSRQNLPPSTPIRISRCTSETERSRNLMQSC 450
R S+ P +T SP HTS PS+P R SRC S RSR L S
Sbjct: 249 RGRSSLTAPPCHGLTPSPKRTLGSARISHTSVSTTSPSSPSR-SRCRSLRIRSRCLSSSA 425
Query: 451 TT 452
++
Sbjct: 426 SS 431
>TC13802 similar to UP|Q9M1T1 (Q9M1T1) Sugar-phosphate isomerase-like
protein, partial (41%)
Length = 522
Score = 40.0 bits (92), Expect = 0.001
Identities = 50/160 (31%), Positives = 67/160 (41%), Gaps = 7/160 (4%)
Frame = +2
Query: 251 SDVSSEP----TTPLSPQVITDYVG-SPLTDRLMRFPSL-PVVRMPSHGSSPSSLPFSRR 304
S +SS P +T SP T SP +R PS P P+ + S P S
Sbjct: 89 SQISSNPNKTTSTTSSPTSTTPKPSPSPAPSSTLRAPSSSPASASPASSPTKSPKPSSPS 268
Query: 305 HSWSYENCRASPPAVNYYSPSPTHSESH-TLVSNASSQGYCPPSSLPPHPSEMSLLHKKN 363
S +PP+ +PS SES T S++SS PP+S + L +
Sbjct: 269 AS--------APPSSTPLTPSTATSESSPTATSSSSSASPAPPTSFSALSRALELKALAS 424
Query: 364 VNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTLLRSES 403
PSP SP PSP S+ I SL+S + +RS S
Sbjct: 425 S------PSPPSSPPPSPPSA--ICMSTSLSSASSVRSTS 520
Score = 38.5 bits (88), Expect = 0.003
Identities = 37/134 (27%), Positives = 52/134 (38%)
Frame = +2
Query: 347 SSLPPHPSEMSLLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTLLRSESAPV 406
S+L PS++S K + S PSPSP+ SS + + S S S+P
Sbjct: 68 STLTKPPSQISSNPNKTTSTTSSPTSTTPKPSPSPAPSSTLRAPSS--SPASASPASSPT 241
Query: 407 NIPNAEVTYSPGHTSRQNLPPSTPIRISRCTSETERSRNLMQSCTTPEKMFSIGKESQKY 466
P P S P STP+ S TSE+ + S +P S S+
Sbjct: 242 KSPK------PSSPSASAPPSSTPLTPSTATSESSPTATSSSSSASPAPPTSFSALSRAL 403
Query: 467 SGGKIAPNSSPQIS 480
+A + SP S
Sbjct: 404 ELKALASSPSPPSS 445
>TC15560 similar to SP|Q03173|NDPP_MOUSE NPC derived proline rich protein 1
(NDPP-1). {Mus musculus;}, partial (8%)
Length = 1134
Score = 40.0 bits (92), Expect = 0.001
Identities = 57/199 (28%), Positives = 84/199 (41%), Gaps = 19/199 (9%)
Frame = +3
Query: 313 RASPPAVNYYSPSPTHSESH-----TLVSNASSQGYCPPSSLPPHPSEMSLLHKKNVNFD 367
RA+ +Y S P ++SH T ++ASS PSS P PS + +
Sbjct: 42 RATQTPSSYSSTLPFTNKSHHHYPLTTTASASSSSSSSPSSS*PSPS-LPPPSPPPLPPP 218
Query: 368 EYYPSPNFSPSPSPSSSSPIYSLGSLASK--TLLRS------ESAPVNIPNAEVTYSPGH 419
+ P P+ PSP PSS+ P + +K L +S SAP +P + SP
Sbjct: 219 QAPPLPSHLPSPEPSSTMPPSTPPPQPTKPCPLPKSTPSQPPSSAPHRVPTSSSLASP-- 392
Query: 420 TSRQNLPPST----PIRISRCTSETERSRNLMQSCTTPEKMFSIGKESQKYSGGKIAPNS 475
TS + P ST P +R ++ + S N + P S+ K + S S
Sbjct: 393 TSPSSGPHSTTMAAPFSSTRTSTPSPNSNN-PTPASKPTTFSSLQK*ASTLSFSLRREQS 569
Query: 476 SPQIS--FSRSSSRSYQDE 492
P+I+ F SSSR+ E
Sbjct: 570 PPEIADPFRISSSRNASSE 626
>TC9746
Length = 637
Score = 39.3 bits (90), Expect = 0.002
Identities = 51/190 (26%), Positives = 72/190 (37%), Gaps = 14/190 (7%)
Frame = +2
Query: 254 SSEPTTPLSPQVITDYVGSPLTDRLMR---FPSLPVVRMPSHGSSPSSLPFS--RRHSWS 308
+ + T P S +T + SP + + PS P+ S P S P S R + +
Sbjct: 122 AKKKTQPYSSLSLTWHTPSPTSKPKCQPPPHPSSTATSSPASNSEPPSGPNSPARWGT*A 301
Query: 309 YENCRASPPAVNYYSPSPTHSES-HTLVSNASSQGYCPPSSLPPHPSEMSLLHKKNVNFD 367
+ +SP + SP HS S H+ S +S P S P PS S
Sbjct: 302 PTSPSSSPSL*STTLTSPPHSSSPHSTTSPLASSSASPCQSSP*SPSPPS---------- 451
Query: 368 EYYPSPNFSPSPSPSSSSPIYSLGSLASKTLLRSESAPVNIPNAEVT--------YSPGH 419
PSP SPSP S P + S S + PV+ P++ T +S
Sbjct: 452 ---PSPKHPHSPSPRSPPP-----ASPSPPYFSSSAPPVSCPSSTATSLCQSSAAFSSPR 607
Query: 420 TSRQNLPPST 429
S PPS+
Sbjct: 608 GSTSPCPPSS 637
>AW720177
Length = 505
Score = 39.3 bits (90), Expect = 0.002
Identities = 38/122 (31%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Frame = +1
Query: 313 RASPPAVNYYSPSPTHSESHTLVSNASSQGYCPPSSLPPHPSEMSLLHKKNVNFDEYYPS 372
+ SPP+ PS SES++ S +S PPS PP P SL PS
Sbjct: 142 KKSPPSKTS-KPSGHSSESNSPTSKPTSP-ISPPSFPPPPPPTHSLSTSST-------PS 294
Query: 373 PNFSPSPSPSSSSPIYSLGSLASKTLLRSESAPVNIPNAEVTYSPGH------TSRQNLP 426
P S PSPS +S SLA + ++ S P + P+ + + + +S LP
Sbjct: 295 PPLSTPPSPSRNSATPPPTSLAXSSKPKATSTPSSPPSTATSPTATYYSVVDSSSTPPLP 474
Query: 427 PS 428
PS
Sbjct: 475 PS 480
>TC8484 similar to UP|Q9XGP1 (Q9XGP1) ESTs AU070372(S13446), partial (76%)
Length = 1121
Score = 38.9 bits (89), Expect = 0.002
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 23/182 (12%)
Frame = +1
Query: 295 SPSSLPFSRRHSWSYENCRA-------SPPAVNYYSPS-----PTHSESHTLVSNASSQG 342
S SS PF+ W ++ SPP ++ +PS P S T+ + S
Sbjct: 58 SLSSAPFTHTL*WHLQSPYPGSFLPPPSPPLSSHPNPSSPPNSPPSPSSSTVATPNPSDS 237
Query: 343 YCPPSSLPPHPSEMSLLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTLLRSE 402
+ PP S PP PS + L +P + S +P+ S P SL S + S
Sbjct: 238 HPPPPSPPPSPSATNSL------------NPPYPTSTTPARSKPSPSLNSPRGRRQSSSP 381
Query: 403 SAPVNIPNAEVTYSPGHTSRQNLPP-----STPIRISRCTSET--ERSRNL----MQSCT 451
S + A + SPG S +N P STP R R T+ + R R + M+ C
Sbjct: 382 SPARSPRLARRSTSPG--SWRNPPS*RRRGSTPSRAFR*TTRS**RRGRRISS*RMRCCY 555
Query: 452 TP 453
P
Sbjct: 556 CP 561
>TC14775 PIR|S14181|S14181 DNA-directed RNA polymerase largest chain
(isoform B1) - soybean (fragment) {Glycine
max;} , partial (22%)
Length = 848
Score = 38.5 bits (88), Expect = 0.003
Identities = 41/131 (31%), Positives = 51/131 (38%), Gaps = 15/131 (11%)
Frame = +1
Query: 282 PSLPVVRMPSHGSSPSSLPFSRRHSWSYENCRASPPAVNYYSPSPTHSESHTLVSNAS-- 339
P+ P S G SP+S +S + P YSPS +S S +S +S
Sbjct: 13 PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPY 192
Query: 340 ---SQGYCP--PSSLPPHPS--------EMSLLHKKNVNFDEYYPSPNFSPSPSPSSSSP 386
S Y P PS P PS S + V+ D SP FSPS S S P
Sbjct: 193 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQP 372
Query: 387 IYSLGSLASKT 397
YS S + T
Sbjct: 373 GYSPSSTSQYT 405
>TC15257 similar to PIR|T39903|T39903 serine-rich protein - fission yeast
(Schizosaccharomyces pombe)
{Schizosaccharomyces pombe;}, partial (5%)
Length = 572
Score = 38.1 bits (87), Expect = 0.004
Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 10/129 (7%)
Frame = +1
Query: 305 HSWSYENCRASPPAVNYYSPSPTHSESHTLVSNASS----QGYCPPSSLPPHPSEMS--- 357
H W R + A + + +PT S SH S+A S P SS S S
Sbjct: 76 HPWIQSKKRCNS*ASSESTENPTRSSSHGEKSSAKSP*L*SSLSPLSSSSTWKSPTSSSA 255
Query: 358 ---LLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTLLRSESAPVNIPNAEVT 414
H+K +P+ SP+ SP S PI GS + T S S+P + P T
Sbjct: 256 RSTTTHRKCSTHHRTHPNTKNSPT*SPLSGPPI---GSSSLPTSPSS*SSPSSQPPPSST 426
Query: 415 YSPGHTSRQ 423
SP T R+
Sbjct: 427 PSPRSTPRE 453
>TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, partial
(68%)
Length = 1097
Score = 38.1 bits (87), Expect = 0.004
Identities = 44/179 (24%), Positives = 74/179 (40%), Gaps = 6/179 (3%)
Frame = +1
Query: 282 PSLPVVRMPSHGSSPSSLPFSRRHSWSYENCRASPPAVNYYSPSPTHSESHTLVSNASSQ 341
P+ P SH S+P P SR S + ++ A+ ++ S P S + T + + +
Sbjct: 280 PASPPTPKSSHSSTP---PPSRSSSTTPKSKNAT--SLTAPSCPPPASPAATAPAPSKTP 444
Query: 342 GYCPPSSLPPHPSEMSLLHKKNVNFDEYYPSPNFSPSPSPSS----SSPIYSLGSLASKT 397
P +S P + SL + + PSP SP +PSS P + S ++
Sbjct: 445 PNPPTNSSKPSSCKSSLPNTTPSSLSSAPPSPTTSPISTPSSPENQEKPASTPPSAPPRS 624
Query: 398 LLRSESAPVNIPN--AEVTYSPGHTSRQNLPPSTPIRISRCTSETERSRNLMQSCTTPE 454
S S+P+N P + T +P + PP + + + R +S TTP+
Sbjct: 625 TSSSSSSPINTPRKPSSATKAPASS-----PPGSELSLHHSPPSASR-----KSSTTPK 771
>TC12354 similar to UP|O23702 (O23702) Dehydrogenase, partial (25%)
Length = 488
Score = 37.7 bits (86), Expect = 0.005
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = +3
Query: 291 SHGSSPSSLPFSRRHSWSYENCRASPPAVNYYSPSPTHSESHTLVS--NASSQGYCPPSS 348
S SP+S P S S R+SPP ++ +PSPT + VS SS PP++
Sbjct: 60 SSNPSPASPPSSTSLSAVSPMARSSPPPLSSSTPSPTFHAPPSAVSALTTSSSASAPPTA 239
Query: 349 LPPHPSEMSLLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTLLR 400
P SLL + +F +P S +PS SS + + + TL R
Sbjct: 240 PSTLP---SLLTSASASFTSTPHAPMRSLTPSWRCSSAFSAARTCSLVTLCR 386
>AV416351
Length = 428
Score = 37.4 bits (85), Expect = 0.006
Identities = 35/117 (29%), Positives = 53/117 (44%), Gaps = 2/117 (1%)
Frame = +3
Query: 314 ASPPA--VNYYSPSPTHSESHTLVSNASSQGYCPPSSLPPHPSEMSLLHKKNVNFDEYYP 371
+SPP V+ PS ++ S++ + PP PP PS S KKN + P
Sbjct: 3 SSPPRKIVSTSLPSSPLPKAPPFSSSSPPRNPRPPP--PPPPSSSSSPEKKNSPINHVLP 176
Query: 372 SPNFSPSPSPSSSSPIYSLGSLASKTLLRSESAPVNIPNAEVTYSPGHTSRQNLPPS 428
SP +P SP KT+ +S+ +P+N P ++++ P S LPPS
Sbjct: 177 SP--TPHQSP--------------KTIRQSDLSPMNSPKSKLSARP--PSPLTLPPS 293
>TC8595 similar to PIR|T09390|T09390 21K protein precursor - alfalfa
{Medicago sativa;}, partial (93%)
Length = 811
Score = 37.4 bits (85), Expect = 0.006
Identities = 27/95 (28%), Positives = 37/95 (38%)
Frame = +2
Query: 297 SSLPFSRRHSWSYENCRASPPAVNYYSPSPTHSESHTLVSNASSQGYCPPSSLPPHPSEM 356
SS P + H +S C +SPP ++ PT S N P PP P
Sbjct: 20 SSFPPWQTHPFSSPPCSSSPPCISPPQTPPTSSNPPAAPPNTQLSASNPS---PPTPPPS 190
Query: 357 SLLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLG 391
+ H + + PSP+ PSP SS + G
Sbjct: 191 NKTHTSSSKL--HSPSPSTEPSPPKPSSQDAKTSG 289
>TC8093 homologue to UP|EFTU_TOBAC (P41342) Elongation factor Tu,
chloroplast precursor (EF-Tu), partial (58%)
Length = 1146
Score = 37.0 bits (84), Expect = 0.008
Identities = 41/144 (28%), Positives = 57/144 (39%), Gaps = 14/144 (9%)
Frame = +2
Query: 326 PTHSESHTLV-----------SNASSQGYCPPSSLPPH--PSEMSLLHKKNVNFDEYYPS 372
P +S +HTL+ +++S Y PP+S PP P S + N P
Sbjct: 122 PPNSSTHTLLLLPLTLTPLPPASSSDPNYPPPTSPPPSILPQSSSTRRRNN-------PP 280
Query: 373 PNFSPSPSPSSSSPIYSLGSLASKTLLRSESAPVNIPNAEVTYSPGHTSRQNLPPS-TPI 431
P + +P PS S+P+ +A + N T +P TS PPS P
Sbjct: 281 PPSTAAPPPSPSAPL---------------AASSSARNPMSTSAPSATSTTAKPPSPPPS 415
Query: 432 RISRCTSETERSRNLMQSCTTPEK 455
SET RN +S T P K
Sbjct: 416 PWPSLPSETAPPRNTTKS-TPPLK 484
Score = 37.0 bits (84), Expect = 0.008
Identities = 55/213 (25%), Positives = 82/213 (37%), Gaps = 17/213 (7%)
Frame = +2
Query: 254 SSEPTTPLSPQVITDYVGSPLTDRLMRFPSLPVVRMPSHGSSPSSLPFSRRHSWSYENCR 313
SS T L P +T PL P+ P P P S RR++ +
Sbjct: 131 SSTHTLLLLPLTLT-----PLPPASSSDPNYPPPTSPPPSILPQSSSTRRRNNPPPPSTA 295
Query: 314 ASPP------AVNYYSPSPTHSESHTLVSNASSQGYCPPSSLPPHPSEMSLLHKKNVNFD 367
A PP A + + +P + + + S + PPS P PSE + +
Sbjct: 296 APPPSPSAPLAASSSARNPMSTSAPSATSTTAKPPSPPPSPWPSLPSETAPPRNTTKSTP 475
Query: 368 EYYPSPNFSPS-PSPSSSSP-IYSLGSLASKTLLRSESAPVNIP---NAEVTYSPGHTSR 422
+ SPS P PSS+ P I ++ +L + L + + +P A SP T+
Sbjct: 476 PLKSALAVSPSTPPPSSTRPRIATMLTLTAPATLITSRT*LPVPPRWTALFLLSPAPTAL 655
Query: 423 QNLPPSTPIRISRCT------SETERSRNLMQS 449
P ST SR S T R+R +M+S
Sbjct: 656 CRRPKSTSSWRSRLVYLTWWFSSTSRTRLMMRS 754
>BP033767
Length = 541
Score = 37.0 bits (84), Expect = 0.008
Identities = 45/145 (31%), Positives = 56/145 (38%), Gaps = 4/145 (2%)
Frame = +1
Query: 257 PTTPLSPQVITDYVGSP-LTDRLMRFP---SLPVVRMPSHGSSPSSLPFSRRHSWSYENC 312
P PL+PQ + P L + FP P +MP H SSP H+ + +
Sbjct: 169 PFHPLNPQTHHHHHHLPHLQTQNTHFPPPPQPPPPKMPPHLSSP--------HTHLHHHL 324
Query: 313 RASPPAVNYYSPSPTHSESHTLVSNASSQGYCPPSSLPPHPSEMSLLHKKNVNFDEYYPS 372
PP+ PSP S S PP+ PP S S P
Sbjct: 325 LLPPPS----PPSPPTSPP--------SSSLKPPNPNPPTSSSAS-------------PL 429
Query: 373 PNFSPSPSPSSSSPIYSLGSLASKT 397
P SP+PSPSS SP S A+KT
Sbjct: 430 PP-SPAPSPSSLSPPSSTADAAAKT 501
Score = 30.8 bits (68), Expect = 0.57
Identities = 28/108 (25%), Positives = 40/108 (36%)
Frame = +3
Query: 340 SQGYCPPSSLPPHPSEMSLLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTLL 399
+QG PPS PP+P PSPSPS +P Y S + T
Sbjct: 159 TQGSLPPSQ-PPNPPP---------------------PSPSPSPPNPKYPFSSTPTTTTT 272
Query: 400 RSESAPVNIPNAEVTYSPGHTSRQNLPPSTPIRISRCTSETERSRNLM 447
++ S P P +S + P + I TS+ + S L+
Sbjct: 273 QNASTPFFPTYPSPPPPPSPSSFASFPANISSLILPQTSKPKSSHKLL 416
>BP036801
Length = 540
Score = 36.6 bits (83), Expect = 0.010
Identities = 40/132 (30%), Positives = 57/132 (42%), Gaps = 3/132 (2%)
Frame = +2
Query: 315 SPPAVNYYSPSPTHSESHTLVSNASSQGYCP-PSSLPPHPSEMSLLHKKNVNFDEYYPSP 373
+P + + SPSPT + + T V+ SS P PSS P+ +L K + PSP
Sbjct: 179 APTSAHPTSPSPTAAAASTPVTWPSSSTAPPTPSSTTSPPTLSALSPSKPTHGAPPAPSP 358
Query: 374 NFSPSPSPSSSSPIYSLGSLASKTLLRSESAPVNIPNAEVTYSPGHTSRQNLPP--STPI 431
+PS P++S T + SAP + P T + G S + PP TP
Sbjct: 359 PTAPSSKPAAS------------TTATTSSAP-SPPAHNTTSATGSNSPRISPPLAGTPP 499
Query: 432 RISRCTSETERS 443
S T E+ S
Sbjct: 500 TKSSPTEESSSS 535
>AV427017
Length = 429
Score = 36.2 bits (82), Expect = 0.014
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Frame = +3
Query: 300 PFSRRH---------SWSYENCRASPPAVNYYSPSPTHSESHTLVSNASSQGYCPPSSLP 350
PF RR+ + + E AS PA S + + S T S +S++ P SS P
Sbjct: 24 PFRRRNRNPTTAQPTTTTAEAAAASAPASAAASAAAA-AASPTASSASSARSSPPSSSSP 200
Query: 351 PHPSEMSLLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTLLRSESAPVNIPN 410
P P+ S + + P P+ SP+P++ S S + S+T L +ESA P+
Sbjct: 201 PSPASSSG*SSAPTSSNSASPKPHSLNSPTPTTLSTTISPSTSPSET-LTAESASTTTPS 377
Query: 411 AEVTYSPGHTSRQNL 425
++ T+R +L
Sbjct: 378 KRRRFT---TTRDSL 413
>TC16823 similar to UP|Q8LGA2 (Q8LGA2) Seed maturation-like protein, partial
(29%)
Length = 711
Score = 35.8 bits (81), Expect = 0.018
Identities = 44/147 (29%), Positives = 54/147 (35%), Gaps = 12/147 (8%)
Frame = +1
Query: 296 PSSLPFSRRHSWSY-ENCRASPPAVNYYSPSPTHSESHTLVSNASSQGYCPPSS---LPP 351
PS LP +HS + ASP + S P+H S + + ASS P S L P
Sbjct: 19 PSFLPIPWQHSHGDPSSSHASPTSHPILSTHPSHHLSSSAAAAASSPPATPMGSRRPLLP 198
Query: 352 HPSEMSLLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTLLRSESAPV----- 406
HP MS P PS + S SSP S S S T +P
Sbjct: 199 HPLTMS-------------SPPGNPPSTAASPSSPTCSAASSPSITPSSQRVSPTPPETP 339
Query: 407 ---NIPNAEVTYSPGHTSRQNLPPSTP 430
P V P + +L PSTP
Sbjct: 340 *SRPSPPCSVCSPPITSLSLSLFPSTP 420
>TC19436 similar to UP|Q93Y06 (Q93Y06) Receptor protein kinase-like protein,
partial (19%)
Length = 570
Score = 35.8 bits (81), Expect = 0.018
Identities = 44/171 (25%), Positives = 68/171 (39%), Gaps = 4/171 (2%)
Frame = +2
Query: 292 HGSSPSSLPFSRRHSWSYENCRASPPAVNYYSPSPTHSESHTLVSNASSQGYCPPSSLPP 351
H ++ S L S+ HS + PP ++ P ++S SNA SS
Sbjct: 20 HVNNTSFLIISKPHSSLSSSSLPPPPPLSMTPPRSHQTQSPCYPSNAKQTK--TTSSSTR 193
Query: 352 HPSEMSLLHKKNVNFDEYYPSPN---FSPSPSPSSSSPIYSLGSLASKTLLRSESAPVNI 408
S + + K N S + SPSP+PS +P S AS + + S SA
Sbjct: 194 STSATTTANGKESNAHRVASSASSSKTSPSPAPSPRTP-----SRASTSSVSSRSATTPS 358
Query: 409 PNAEVTYSPGHTSRQNLPPSTPI-RISRCTSETERSRNLMQSCTTPEKMFS 458
P+ + TS + +T +SR S + +L +S TT + S
Sbjct: 359 PDPSLISHLSQTSNHSSSTATTSPALSRRQSSPSTASSLSRSATTTSPVSS 511
>AV409790
Length = 421
Score = 35.4 bits (80), Expect = 0.023
Identities = 42/140 (30%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Frame = +3
Query: 297 SSLPFSRRHSWSYENCRASPPAVNYYSPSPTHSESHTLVSNASSQGYCPPSSLPPHPSEM 356
SSLP S + N PP + Y SPT + SH+L N P L + +
Sbjct: 15 SSLPLSSKQGPLPSN----PPPFHPYLLSPTLNHSHSLTQNL-------PPILIKTSNPL 161
Query: 357 SLLHKKNVNFDEYYPSP---NFSPSPSPSSSSPIYSLGSLASKTLLRSESAPV--NIPNA 411
SL K +F + P P +FS S SS + L S T + ++ P +P A
Sbjct: 162 SLPKKNQASFHSWIP*PPLISFS-LLSYSSLPQVSELPPSPSSTDVTTQCGPAFSQMPAA 338
Query: 412 EVTYSPGHTSRQNLP-PSTP 430
+ +P +S LP PS P
Sbjct: 339 PLLKAPASSSPPPLPAPSKP 398
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.313 0.127 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,992,655
Number of Sequences: 28460
Number of extensions: 213420
Number of successful extensions: 3110
Number of sequences better than 10.0: 318
Number of HSP's better than 10.0 without gapping: 2202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2743
length of query: 535
length of database: 4,897,600
effective HSP length: 95
effective length of query: 440
effective length of database: 2,193,900
effective search space: 965316000
effective search space used: 965316000
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Medicago: description of AC146842.6