TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146807.2 + phase: 0 
         (309 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC8853 similar to PIR|T09217|T09217 protein sam2B - spinach {Spi...    31  0.23
TC14892 similar to UP|Q9Z0W6 (Q9Z0W6) Pax transcription activati...    29  1.2
TC8711 weakly similar to UP|VCLC_PEA (P13918) Vicilin precursor,...    28  2.0
AV776879                                                               28  2.0
TC7928 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like...    28  2.6
AV773315                                                               27  3.4
BP055755                                                               27  4.4
BP050750                                                               27  4.4
TC15099 weakly similar to UP|Q8LQG1 (Q8LQG1) Vacuolar sorting re...    27  4.4
AV767377                                                               27  4.4
TC19138 weakly similar to UP|Q9LZJ3 (Q9LZJ3) Alpha galactosyltra...    27  4.4
NP459574 NADH dehydrogenase ND6 [Lotus japonicus]                      26  7.5
BP073599                                                               26  7.5

>TC8853 similar to PIR|T09217|T09217 protein sam2B - spinach {Spinacia
           oleracea;}, partial (43%)
          Length = 1157

 Score = 31.2 bits (69), Expect = 0.23
 Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = +3

Query: 212 GMYQEHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEK- 270
           G ++E   +E   +++     ++ E      +GK+E +  + + +KKELVKV +E  E+ 
Sbjct: 306 GEFEERRELEKMAEELQNQVDDDGE------EGKEETEEEKRMRVKKELVKVAKEQAERR 467

Query: 271 --DELLMRDSKRARGR 284
              +L+    ++A GR
Sbjct: 468 ATAQLMFDLGQKAYGR 515


>TC14892 similar to UP|Q9Z0W6 (Q9Z0W6) Pax transcription activation domain
            interacting protein PTIP, partial (3%)
          Length = 1502

 Score = 28.9 bits (63), Expect = 1.2
 Identities = 13/29 (44%), Positives = 17/29 (57%)
 Frame = -1

Query: 242  LDGKDEQKTHENLMLKKELVKVRRELEEK 270
            L  KDEQ TH+NL   K +  + RE+  K
Sbjct: 1193 LSPKDEQTTHQNLNFSKHVSHLAREITTK 1107


>TC8711 weakly similar to UP|VCLC_PEA (P13918) Vicilin precursor, partial
          (74%)
          Length = 1591

 Score = 28.1 bits (61), Expect = 2.0
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 27 RTLKG-RGYILCCVPLLYRWFISHLP 51
          R LK  RG++ CC    + WF+S LP
Sbjct: 42 RVLKSKRGFLCCCCWEFFSWFLSPLP 119


>AV776879 
          Length = 201

 Score = 28.1 bits (61), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (43%)
 Frame = +2

Query: 103 RGGINYNPELAMRQFGFPMKAKPINLATSPEFFYYSNAPTGQREAFIGAWSK 154
           RGG+NYN EL  R  G P  A  + L          N P  Q    +G W++
Sbjct: 41  RGGLNYNMEL--RWEGVPSVADALRLLKEQA----DNTPAPQWVRVVGGWTE 178


>TC7928 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like, partial
           (52%)
          Length = 765

 Score = 27.7 bits (60), Expect = 2.6
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +3

Query: 197 ASAPSIPLPLPP---TTQGMYQEHLAMESREKQMWKARYNEAENLIMTLDGK 245
           ASAPS PLPL P   T + M    + M S+ +   + +     NLI +L GK
Sbjct: 117 ASAPSFPLPLTPIRSTRRAMMI*KIFMRSK*RWKNQRKMMR*LNLISSLKGK 272


>AV773315 
          Length = 519

 Score = 27.3 bits (59), Expect = 3.4
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -2

Query: 256 LKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSDSESES 300
           ++  ++K+   L  K     R   + RGR    ARYC    ESES
Sbjct: 452 IRSRMLKLSLMLPSKLFFYHRSRSKTRGRHRRLARYCDYG*ESES 318


>BP055755 
          Length = 273

 Score = 26.9 bits (58), Expect = 4.4
 Identities = 14/42 (33%), Positives = 24/42 (56%), Gaps = 1/42 (2%)
 Frame = -3

Query: 192 MRYVSASAPS-IPLPLPPTTQGMYQEHLAMESREKQMWKARY 232
           +++ S S P  IP P  P+T   +QE  A  +R  ++W+ +Y
Sbjct: 271 VKFPSHSNPCPIPPPYDPSTFPSFQEGKAYATRPVEIWEDKY 146


>BP050750 
          Length = 503

 Score = 26.9 bits (58), Expect = 4.4
 Identities = 22/48 (45%), Positives = 28/48 (57%), Gaps = 1/48 (2%)
 Frame = -1

Query: 123 AKPINLATSPEFFYYSNAPTG-QREAFIGAWSKVCRKSVKHLGVRSGI 169
           AKPI  A   +FFYY +AP+G   E+FIGA        V+ + VR GI
Sbjct: 278 AKPI--ACLSKFFYY-DAPSGCCDESFIGAVKSSSLGFVRGMVVRIGI 144


>TC15099 weakly similar to UP|Q8LQG1 (Q8LQG1) Vacuolar sorting receptor-like
           protein, partial (16%)
          Length = 687

 Score = 26.9 bits (58), Expect = 4.4
 Identities = 11/29 (37%), Positives = 16/29 (54%)
 Frame = -2

Query: 186 GMPYPAMRYVSASAPSIPLPLPPTTQGMY 214
           G P+P++RY +    + P P P T Q  Y
Sbjct: 209 GCPFPSIRYSAKYVKTRPTP*PSTVQRKY 123


>AV767377 
          Length = 444

 Score = 26.9 bits (58), Expect = 4.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 138 SNAPTGQREAFIGAWSKVCRKSVKHLGV 165
           S+ P+G    F+ +W+K+C   +K L +
Sbjct: 372 SSHPSGGYMCFVPSWTKLCESKIKKLWI 289


>TC19138 weakly similar to UP|Q9LZJ3 (Q9LZJ3) Alpha
           galactosyltransferase-like protein
           (AT3g62720/F26K9_150), partial (12%)
          Length = 458

 Score = 26.9 bits (58), Expect = 4.4
 Identities = 19/68 (27%), Positives = 30/68 (43%), Gaps = 8/68 (11%)
 Frame = +1

Query: 172 EAYTQWVINRAEE--------IGMPYPAMRYVSASAPSIPLPLPPTTQGMYQEHLAMESR 223
           E +T+    RAE+        I  P PA   ++   P +PLPLP      ++ H +   R
Sbjct: 169 ERWTEVWCGRAEQQNAGTVLRISPPPPAAARLAPRLPHLPLPLP------HRHHASRHHR 330

Query: 224 EKQMWKAR 231
            +Q+   R
Sbjct: 331 SRQVRNPR 354


>NP459574 NADH dehydrogenase ND6 [Lotus japonicus]
          Length = 531

 Score = 26.2 bits (56), Expect = 7.5
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 47  ISHLPSSFHDNSENWSYSQRIMALTPNEV-VWITPT 81
           I  +PS      ++W YS+  M +TPN +  +I PT
Sbjct: 305 IKVIPSPTVQRRKSW*YSEPFMNITPNMIKTFIAPT 198


>BP073599 
          Length = 298

 Score = 26.2 bits (56), Expect = 7.5
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 11 NPVPTLLADTYHAIHDRTLKGR 32
          +PVPTL + T+  I +RTL GR
Sbjct: 7  HPVPTLASVTHFLIKNRTLIGR 72


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.318    0.134    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,803,337
Number of Sequences: 28460
Number of extensions: 83815
Number of successful extensions: 562
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of query: 309
length of database: 4,897,600
effective HSP length: 90
effective length of query: 219
effective length of database: 2,336,200
effective search space: 511627800
effective search space used: 511627800
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)