BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146791.8 + phase: 0
(715 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP040806 66 2e-11
AV417736 62 3e-10
AV779633 62 4e-10
AV766731 59 4e-09
TC19070 weakly similar to UP|Q9LRP6 (Q9LRP6) DNA-binding protein... 59 4e-09
BP035488 58 5e-09
TC19987 weakly similar to UP|Q7XJT3 (Q7XJT3) At2g17140 protein, ... 54 9e-08
BI418759 49 2e-06
AV770033 49 3e-06
BP042107 48 5e-06
AV429083 48 6e-06
AV767789 47 8e-06
AV772727 46 2e-05
AV421386 45 5e-05
AV425299 44 1e-04
BF177625 42 3e-04
AV771187 42 4e-04
TC13038 39 0.003
BP063629 39 0.004
AV427280 38 0.005
>BP040806
Length = 534
Score = 65.9 bits (159), Expect = 2e-11
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 327 QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALE 386
+P Y L +GK+G+P AR LF MI+ G P+ +T TA++ Y ++ +A
Sbjct: 79 EPKEGTYMKLXVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 258
Query: 387 LWKRMKENGWPM---DFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAML 443
+ MK + P+ D Y+TL+ C D + E L+ DM + P++ + +L
Sbjct: 259 ILNEMKNH--PLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM-AARSIMPNTVTQNIVL 429
Query: 444 NIYGSEGAVDKAMKLFEEM 462
+ YG G D+ K+ M
Sbjct: 430 SGYGKAGKFDQMEKVLSSM 486
Score = 53.9 bits (128), Expect = 9e-08
Identities = 36/134 (26%), Positives = 60/134 (43%), Gaps = 1/134 (0%)
Frame = +1
Query: 227 TYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLF-ER 285
TY + K +A F M + G P T++A+L Y R ++E ++ E
Sbjct: 94 TYMKLXVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 273
Query: 286 GRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGK 345
+PD T+S L K +A +D + + ++M + + PN V N +L GKAGK
Sbjct: 274 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 453
Query: 346 PGFARSLFEEMIDS 359
+ M++S
Sbjct: 454 FDQMEKVLSSMLES 495
Score = 52.8 bits (125), Expect = 2e-07
Identities = 44/182 (24%), Positives = 69/182 (37%), Gaps = 1/182 (0%)
Frame = +1
Query: 258 PDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYV 317
P E T+ + + + G+ LF G P P T++ L + + D +
Sbjct: 82 PKEGTYMKLXVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 261
Query: 318 LQEMKSLGV-QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYG 376
L EMK+ + QP++ Y+TL++ A K L+E+M I PN T V+ YG
Sbjct: 262 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 441
Query: 377 KARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDS 436
KA G ++ E + M +S CKPD
Sbjct: 442 KA-----------------------------------GKFDQMEKVLSSMLESTSCKPDV 516
Query: 437 WS 438
W+
Sbjct: 517 WT 522
Score = 38.9 bits (89), Expect = 0.003
Identities = 27/97 (27%), Positives = 45/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 206 FGIIEELAHQMIDGGVELDNITYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSA 265
F I+ E+ + + + D TYST+I FD +E M +MP+ VT +
Sbjct: 253 FSILNEMKNHPL---CQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNI 423
Query: 266 ILDVYARLGKVEEVVN-LFERGRATGWKPDPITFSVL 301
+L Y + GK +++ L +T KPD T + +
Sbjct: 424 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTI 534
>AV417736
Length = 428
Score = 62.0 bits (149), Expect = 3e-10
Identities = 38/129 (29%), Positives = 64/129 (49%)
Frame = +1
Query: 290 GWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFA 349
G +PD +S+L K + +G +L M+ G+QPN+V++ T++ AGK A
Sbjct: 40 GIEPDIHAYSILAKGYVRSGQPGKAEALLTSMRKYGLQPNVVIFTTIISGWCTAGKMDRA 219
Query: 350 RSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNM 409
L E+M + GI N KT ++ YG+A+ A EL M+E G + + +
Sbjct: 220 VRLHEKMHEMGIPSNLKTYETLMWGYGEAKQPWKAEELLVTMEERGVAPEMSTMQLVADA 399
Query: 410 CADVGLIEE 418
+G +E+
Sbjct: 400 WRAIGFLED 426
Score = 38.5 bits (88), Expect = 0.004
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = +1
Query: 417 EEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEMSKFGIELNVMGCTC 476
+ E +F DM ++ +PD +Y+ + Y G KA L M K+G++ NV+ T
Sbjct: 1 DNCEEIFNDMVKAG-IEPDIHAYSILAKGYVRSGQPGKAEALLTSMRKYGLQPNVVIFTT 177
Query: 477 LIQCLGKAMEIDDLVKVFDISVERGVKPDDRLCGCLL-SVVSLSQGSKDQEKVLACLQRA 535
+I A ++D V++ + E G+ + + L+ Q K +E ++ +R
Sbjct: 178 IISGWCTAGKMDRAVRLHEKMHEMGIPSNLKTYETLMWGYGEAKQPWKAEELLVTMEERG 357
Query: 536 NPKLVAFIQLIVD 548
++ +QL+ D
Sbjct: 358 VAPEMSTMQLVAD 396
>AV779633
Length = 440
Score = 61.6 bits (148), Expect = 4e-10
Identities = 43/147 (29%), Positives = 73/147 (49%)
Frame = -2
Query: 218 DGGVELDNITYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVE 277
DGG+ D I +T+I + L +A+ E +KTG+ PD V+++++L + + G +
Sbjct: 436 DGGIARDVIGLNTLIDGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDLV 257
Query: 278 EVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLL 337
+LF+ G++ D GE+G V + ++P L Y TL+
Sbjct: 256 RAESLFD--EILGFQRD-----------GESGQLKN-NAVDTRDELRNIRPTLATYTTLI 119
Query: 338 EAMGKAGKPGFARSLFEEMIDSGIAPN 364
A GK +RSL+E+M+ SGI P+
Sbjct: 118 SAYGKHCGIEESRSLYEQMVMSGIMPD 38
Score = 44.7 bits (104), Expect = 5e-05
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 20/135 (14%)
Frame = -2
Query: 358 DSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGLIE 417
D GIA + L +I Y +A AL L + + G D + YN+LL G +
Sbjct: 436 DGGIARDVIGLNTLIDGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDLV 257
Query: 418 EAETLFRDM--------------------KQSEHCKPDSWSYTAMLNIYGSEGAVDKAMK 457
AE+LF ++ + + +P +YT +++ YG ++++
Sbjct: 256 RAESLFDEILGFQRDGESGQLKNNAVDTRDELRNIRPTLATYTTLISAYGKHCGIEESRS 77
Query: 458 LFEEMSKFGIELNVM 472
L+E+M GI +V+
Sbjct: 76 LYEQMVMSGIMPDVL 32
>AV766731
Length = 576
Score = 58.5 bits (140), Expect = 4e-09
Identities = 41/176 (23%), Positives = 84/176 (47%)
Frame = -3
Query: 251 MYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGD 310
M+ L+P+ V +++++ + ++ V L + TG D IT + L +
Sbjct: 574 MHPRELIPNTVKKNSLINGLCKARRISCAVELVDVMHETGPPADLITTNSLFDGLCKHHL 395
Query: 311 YDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTA 370
D + ++K +QPN+ Y +++ + K G+ A+ +F+ ++ G N T T
Sbjct: 394 LDKAIALFMKVKDPKIQPNIPPYPVIIDGLCKVGRLKIAQEIFQVLLSEGYNLNVMTYTV 215
Query: 371 VIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDM 426
+I Y K +A L +M++NG + + + T++ + ++AE LFR+M
Sbjct: 214 MINGYCKEGLLDEAQALLSKMEDNGCIPNAVNFQTIICALFEKNENDKAERLFREM 47
Score = 48.5 bits (114), Expect = 4e-06
Identities = 42/173 (24%), Positives = 79/173 (45%)
Frame = -3
Query: 328 PNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALEL 387
PN V N+L+ + KA + A L + M ++G + T ++ K A+ L
Sbjct: 553 PNTVKKNSLINGLCKARRISCAVELVDVMHETGPPADLITTNSLFDGLCKHHLLDKAIAL 374
Query: 388 WKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYG 447
+ ++K+ + Y +++ VG ++ A+ +F+ + SE + +YT M+N Y
Sbjct: 373 FMKVKDPKIQPNIPPYPVIIDGLCKVGRLKIAQEIFQVLL-SEGYNLNVMTYTVMINGYC 197
Query: 448 SEGAVDKAMKLFEEMSKFGIELNVMGCTCLIQCLGKAMEIDDLVKVFDISVER 500
EG +D+A L +M G N + +I L + E D ++F + R
Sbjct: 196 KEGLLDEAQALLSKMEDNGCIPNAVNFQTIICALFEKNENDKAERLFREMIAR 38
>TC19070 weakly similar to UP|Q9LRP6 (Q9LRP6) DNA-binding protein
(AT3g15590/MQD17_5), partial (20%)
Length = 744
Score = 58.5 bits (140), Expect = 4e-09
Identities = 36/148 (24%), Positives = 71/148 (47%)
Frame = +3
Query: 337 LEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGW 396
+EA G+ K A ++FE M + + K + ++K+Y + K +L +RM ENG
Sbjct: 24 VEAWGRLQKIEEAEAIFEMMANKWKL-SSKNYSVLLKVYANHKMLKKGKDLIQRMGENGC 200
Query: 397 PMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAM 456
+ + +++L+ + G +E+A+ + + + + P +Y A++ Y G V +
Sbjct: 201 KIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVHNSE 380
Query: 457 KLFEEMSKFGIELNVMGCTCLIQCLGKA 484
K+F M + G + L+Q KA
Sbjct: 381 KIFHRMRQAGYTSRITPFQVLVQAYIKA 464
Score = 46.6 bits (109), Expect = 1e-05
Identities = 41/153 (26%), Positives = 70/153 (44%), Gaps = 2/153 (1%)
Frame = +3
Query: 263 FSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQE-M 321
+S +L VYA +++ +L +R G K P+T+ L K++ +AG+ + VLQ+ M
Sbjct: 114 YSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVM 293
Query: 322 KSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWS 381
+ + P Y ++E K G + +F M +G +++ Y KA+
Sbjct: 294 EQSRMTPMFNTYMAVMEQYAKRGDVHNSEKIFHRMRQAGYTSRITPFQVLVQAYIKAK-- 467
Query: 382 KDALELWKRMK-ENGWPMDFILYNTLLNMCADV 413
A + RMK +N +P NTL A V
Sbjct: 468 VPAYGIRDRMKADNVFP-----NNTLAKQLAQV 551
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/133 (24%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Frame = +3
Query: 265 AILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSL 324
A ++ + RL K+EE +FE A WK +SVL K++ + ++Q M
Sbjct: 18 AAVEAWGRLQKIEEAEAIFEM-MANKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGEN 194
Query: 325 GVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMID-SGIAPNEKTLTAVIKIYGKARWSKD 383
G + + +++L++ +AG+ A ++ +++++ S + P T AV++ Y K +
Sbjct: 195 GCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVHN 374
Query: 384 ALELWKRMKENGW 396
+ +++ RM++ G+
Sbjct: 375 SEKIFHRMRQAGY 413
>BP035488
Length = 534
Score = 58.2 bits (139), Expect = 5e-09
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Frame = +3
Query: 276 VEEVVNLFE-RGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYN 334
VE+ LF + R D T++V+ + G+ + V +++ + +P+L Y
Sbjct: 9 VEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYA 188
Query: 335 TLLEAMGKAGKPGFARSLFEEMIDSGI--APNEKTLTAVIKIYGKARWSKDALELWKRMK 392
T ++A+ K GK G A LF M + G P+ +I + +ALE+++ MK
Sbjct: 189 TFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMK 368
Query: 393 ENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSE-HCKPDSWSYTAMLN 444
E G + YN+L+ + +E+ L DM++ + C P++ +Y+ +LN
Sbjct: 369 ERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLN 527
Score = 53.1 bits (126), Expect = 1e-07
Identities = 31/109 (28%), Positives = 56/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 399 DFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKL 458
D +N +LN +G EA+ +++D+ S+ C+PD ++Y + +G + A+KL
Sbjct: 66 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASK-CRPDLFTYATFIKALTKKGKLGTALKL 242
Query: 459 FEEMSKFGIEL--NVMGCTCLIQCLGKAMEIDDLVKVFDISVERGVKPD 505
F M G +V+ C C+I L + + ++VF ERG +P+
Sbjct: 243 FRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 389
Score = 35.4 bits (80), Expect = 0.032
Identities = 24/101 (23%), Positives = 42/101 (40%), Gaps = 2/101 (1%)
Frame = +3
Query: 258 PDEVTFSAILDVYARLGKVEEVVNLFER--GRATGWKPDPITFSVLGKMFGEAGDYDGIR 315
PD T++ + + GK+ + LF KPD + + +
Sbjct: 168 PDLFTYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEAL 347
Query: 316 YVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 356
V Q+MK G +PN+ YN+L++ + K + L E+M
Sbjct: 348 EVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDM 470
>TC19987 weakly similar to UP|Q7XJT3 (Q7XJT3) At2g17140 protein, partial
(12%)
Length = 350
Score = 53.9 bits (128), Expect = 9e-08
Identities = 29/113 (25%), Positives = 54/113 (47%)
Frame = +3
Query: 261 VTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQE 320
VT+ + + + GK+ + + + G T++ L G G + ++ E
Sbjct: 3 VTYDTFIWKFCKEGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDE 182
Query: 321 MKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIK 373
M+ G+ P++ YN ++ + + GK A SL EM+D GI+PN + +IK
Sbjct: 183 MRERGICPDICTYNNVISCLCEGGKTEDATSLLHEMLDKGISPNISSFKILIK 341
>BI418759
Length = 543
Score = 49.3 bits (116), Expect = 2e-06
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 3/172 (1%)
Frame = +2
Query: 331 VVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKR 390
V N LLE + K GK A +LF++M+D+ PN + + +
Sbjct: 116 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT------------------ 241
Query: 391 MKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKP---DSWSYTAMLNIYG 447
+N ++N C ++G EA FR + K D Y +++ +
Sbjct: 242 ------------FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 385
Query: 448 SEGAVDKAMKLFEEMSKFGIELNVMGCTCLIQCLGKAMEIDDLVKVFDISVE 499
G + +A LFEE+ + +V LI K IDD +KVF V+
Sbjct: 386 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD 541
Score = 38.1 bits (87), Expect = 0.005
Identities = 32/140 (22%), Positives = 57/140 (39%), Gaps = 9/140 (6%)
Frame = +2
Query: 261 VTFSAILDVYARLGKVEEVVNLFERGRATGWKPD--PITFSVLGKMFGEAGDYDGIRYVL 318
VT + +L+V + GK + LF++ P+ + M E + L
Sbjct: 116 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 295
Query: 319 QEMKSLGVQPN-------LVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAV 371
+ G + N + YN ++ + G A +LFEE+ ++P+ T +
Sbjct: 296 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 475
Query: 372 IKIYGKARWSKDALELWKRM 391
I Y K DAL+++ RM
Sbjct: 476 IDAYMKMERIDDALKVFHRM 535
Score = 35.4 bits (80), Expect = 0.032
Identities = 17/63 (26%), Positives = 32/63 (49%)
Frame = +2
Query: 223 LDNITYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNL 282
+D Y+ IIS + L +A FE + L PD T ++D Y ++ ++++ + +
Sbjct: 344 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKV 523
Query: 283 FER 285
F R
Sbjct: 524 FHR 532
>AV770033
Length = 298
Score = 48.9 bits (115), Expect = 3e-06
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = -1
Query: 320 EMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKAR 379
+M+S QP+++ YN +L + K + A + M+D G PNE T T +++ G A
Sbjct: 298 DMESSVYQPSVISYNIVLLGLSKVHRISDAIEVLAAMVDKGCRPNETTYTLLVEGIGYAG 119
Query: 380 WSKDALEL 387
W DA+EL
Sbjct: 118 WPDDAMEL 95
>BP042107
Length = 515
Score = 48.1 bits (113), Expect = 5e-06
Identities = 27/99 (27%), Positives = 46/99 (46%)
Frame = +1
Query: 242 DKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVL 301
D AV +F RM + P + FS IL ++ ++L + G +PD +T S+L
Sbjct: 202 DDAVSFFNRMLQMHPTPSIIEFSMILTSLVKMKHYSTAISLSHQMELKGIRPDIVTSSIL 381
Query: 302 GKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAM 340
+ G V+ + G QPN ++ NTL++ +
Sbjct: 382 INCYCHLGQLTSAFSVMGNILKRGYQPNTIILNTLMKGL 498
Score = 30.0 bits (66), Expect = 1.3
Identities = 21/92 (22%), Positives = 40/92 (42%)
Frame = +1
Query: 176 FFNWIKTQNLLPMETIFYNVTMKSLRFGRQFGIIEELAHQMIDGGVELDNITYSTIISCA 235
FFN + + P I +++ + SL + + L+HQM G+ D +T S +I+C
Sbjct: 217 FFNRMLQMHPTP-SIIEFSMILTSLVKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 393
Query: 236 KKCNLFDKAVYWFERMYKTGLMPDEVTFSAIL 267
A + K G P+ + + ++
Sbjct: 394 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLM 489
>AV429083
Length = 316
Score = 47.8 bits (112), Expect = 6e-06
Identities = 29/94 (30%), Positives = 44/94 (45%)
Frame = +3
Query: 249 ERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEA 308
E K + PD TF+ ++D + GKV+ N+ G PD +T+S L +
Sbjct: 12 EMELKNNIKPDVSTFNILVDALCKKGKVKHAKNVLAVMIKQGVAPDLVTYSTLLDGYCLT 191
Query: 309 GDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGK 342
D +YVL M +GV PN+ YN ++ K
Sbjct: 192 KDMYKGKYVLNAMGRVGVTPNVDSYNIVINGFCK 293
>AV767789
Length = 560
Score = 47.4 bits (111), Expect = 8e-06
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 9/140 (6%)
Frame = -1
Query: 309 GDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTL 368
G Y R V+ E +G+ P ++ YN L+ A + G+ L +EM + P+ T
Sbjct: 560 GQYMEARDVISEFGKIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTY 381
Query: 369 TAVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTL---LNMCADVGLIEEAETLFRD 425
+ +I + + R + A K+M ++G MD Y L L++ A + ++ L
Sbjct: 380 STMIYAFVRVRDFRRAFFYHKQMIKSGQVMDVDSYQKLRAILDVKAAAKIRKDRRALLGI 201
Query: 426 MK------QSEHCKPDSWSY 439
+K Q + K + W Y
Sbjct: 200 VKSKMGVMQEKRKKDEFWKY 141
Score = 40.4 bits (93), Expect = 0.001
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = -1
Query: 193 YNVTMKSLRFGRQFGIIEELAHQMIDGGVELDNITYSTIISCAKKCNLFDKAVYWFERMY 252
YN+ M + G Q + +L +M ++ D++TYST+I + F +A ++ ++M
Sbjct: 488 YNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYAFVRVRDFRRAFFYHKQMI 309
Query: 253 KTGLMPDEVTFS---AILDVYA 271
K+G + D ++ AILDV A
Sbjct: 308 KSGQVMDVDSYQKLRAILDVKA 243
Score = 39.3 bits (90), Expect = 0.002
Identities = 31/143 (21%), Positives = 61/143 (41%), Gaps = 1/143 (0%)
Frame = -1
Query: 253 KTGLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYD 312
K GL P +T++ +++ YAR G+ ++ L + A KPD +T+S + F D+
Sbjct: 518 KIGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMAALNLKPDSVTYSTMIYAFVRVRDFR 339
Query: 313 GIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVI 372
+ ++M G ++ Y L R++ + + I + + L ++
Sbjct: 338 RAFFYHKQMIKSGQVMDVDSYQKL-------------RAILDVKAAAKIRKDRRALLGIV 198
Query: 373 KI-YGKARWSKDALELWKRMKEN 394
K G + + E WK K +
Sbjct: 197 KSKMGVMQEKRKKDEFWKYKKRH 129
>AV772727
Length = 528
Score = 46.2 bits (108), Expect = 2e-05
Identities = 21/76 (27%), Positives = 44/76 (57%)
Frame = -2
Query: 226 ITYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFER 285
ITY +++ K + DKA+ ER+ G+ PD T++ I+D + G+V++ LF+
Sbjct: 524 ITYHSLLDALCKNHHVDKAIALLERVKDKGIQPDMYTYNIIIDGLCKSGRVKDAQELFQD 345
Query: 286 GRATGWKPDPITFSVL 301
G++ + +T++++
Sbjct: 344 LLIKGYRLNVVTYNIM 297
Score = 38.9 bits (89), Expect = 0.003
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = -2
Query: 317 VLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVI 372
+L+ +K G+QP++ YN +++ + K+G+ A+ LF++++ G N T +I
Sbjct: 461 LLERVKDKGIQPDMYTYNIIIDGLCKSGRVKDAQELFQDLLIKGYRLNVVTYNIMI 294
Score = 32.0 bits (71), Expect = 0.35
Identities = 21/81 (25%), Positives = 41/81 (49%)
Frame = -2
Query: 401 ILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFE 460
I Y++LL+ +++A L +K + +PD ++Y +++ G V A +LF+
Sbjct: 524 ITYHSLLDALCKNHHVDKAIALLERVKD-KGIQPDMYTYNIIIDGLCKSGRVKDAQELFQ 348
Query: 461 EMSKFGIELNVMGCTCLIQCL 481
++ G LNV+ +I L
Sbjct: 347 DLLIKGYRLNVVTYNIMINGL 285
>AV421386
Length = 312
Score = 44.7 bits (104), Expect = 5e-05
Identities = 27/104 (25%), Positives = 51/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 266 ILDVYARLGKVEEVVNLFERGRATGWKPDPITFS--VLGKMFGEAGDYDGIRYVLQEMKS 323
I+ + + + ++L+ + + P P T+ + G + E D + +++ +EM
Sbjct: 7 IISALVKSNSLNKALDLYYELISGDFSPTPCTYGPFIDGPLKAERCD-EALKF-FEEMLD 180
Query: 324 LGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKT 367
+PN +YN L+ GKAGK A F+ M+ GI P+ K+
Sbjct: 181 YQCKPNSAIYNILINGFGKAGKIDIACDFFKRMVKEGIRPDLKS 312
Score = 40.0 bits (92), Expect = 0.001
Identities = 22/101 (21%), Positives = 45/101 (43%)
Frame = +1
Query: 194 NVTMKSLRFGRQFGIIEELAHQMIDGGVELDNITYSTIISCAKKCNLFDKAVYWFERMYK 253
N+ + +L +L +++I G TY I K D+A+ +FE M
Sbjct: 1 NIIISALVKSNSLNKALDLYYELISGDFSPTPCTYGPFIDGPLKAERCDEALKFFEEMLD 180
Query: 254 TGLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPD 294
P+ ++ +++ + + GK++ + F+R G +PD
Sbjct: 181 YQCKPNSAIYNILINGFGKAGKIDIACDFFKRMVKEGIRPD 303
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/100 (25%), Positives = 44/100 (44%)
Frame = +1
Query: 231 IISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATG 290
IIS K N +KA+ + + P T+ +D + + +E + FE
Sbjct: 7 IISALVKSNSLNKALDLYYELISGDFSPTPCTYGPFIDGPLKAERCDEALKFFEEMLDYQ 186
Query: 291 WKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNL 330
KP+ +++L FG+AG D + M G++P+L
Sbjct: 187 CKPNSAIYNILINGFGKAGKIDIACDFFKRMVKEGIRPDL 306
Score = 35.8 bits (81), Expect = 0.024
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 453 DKAMKLFEEMSKFGIELNVMGCTCLIQCLGKAMEIDDLVKVFDISVERGVKPD 505
D+A+K FEEM + + N LI GKA +ID F V+ G++PD
Sbjct: 145 DEALKFFEEMLDYQCKPNSAIYNILINGFGKAGKIDIACDFFKRMVKEGIRPD 303
Score = 35.0 bits (79), Expect = 0.042
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +1
Query: 320 EMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKAR 379
E+ S P Y ++ KA + A FEEM+D PN +I +GKA
Sbjct: 64 ELISGDFSPTPCTYGPFIDGPLKAERCDEALKFFEEMLDYQCKPNSAIYNILINGFGKAG 243
Query: 380 WSKDALELWKRMKENG 395
A + +KRM + G
Sbjct: 244 KIDIACDFFKRMVKEG 291
>AV425299
Length = 323
Score = 43.5 bits (101), Expect = 1e-04
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 294 DPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLF 353
D T S L ++ + G+ + + + + G QP++ VYN+++ AG P SL
Sbjct: 24 DASTASALVHLYCKVGNLERAKEAFEVLTRKGFQPDIKVYNSMIMGYVNAGDPKAGESLM 203
Query: 354 EEMID-SGIAPNEKTLTAVIKIYGK 377
++M + GI P ++ TA+++ Y +
Sbjct: 204 KKMEERGGIKPTKEIYTALLRAYSE 278
Score = 42.0 bits (97), Expect = 3e-04
Identities = 26/105 (24%), Positives = 51/105 (47%)
Frame = +3
Query: 358 DSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGLIE 417
++ I + T +A++ +Y K + A E ++ + G+ D +YN+++ + G +
Sbjct: 6 ENQIGLDASTASALVHLYCKVGNLERAKEAFEVLTRKGFQPDIKVYNSMIMGYVNAGDPK 185
Query: 418 EAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEM 462
E+L + M++ KP YTA+L Y G V A ++ M
Sbjct: 186 AGESLMKKMEERGGIKPTKEIYTALLRAYSERGDVIGAGRISTAM 320
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 259 DEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVL 318
D T SA++ +Y ++G +E FE G++PD ++ + + AGD ++
Sbjct: 24 DASTASALVHLYCKVGNLERAKEAFEVLTRKGFQPDIKVYNSMIMGYVNAGDPKAGESLM 203
Query: 319 QEMKSL-GVQPNLVVYNTLLEAMGKAG 344
++M+ G++P +Y LL A + G
Sbjct: 204 KKMEERGGIKPTKEIYTALLRAYSERG 284
>BF177625
Length = 284
Score = 42.4 bits (98), Expect = 3e-04
Identities = 23/75 (30%), Positives = 39/75 (51%)
Frame = +1
Query: 333 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMK 392
Y+ +L +A LF+EM+ G APN T ++ ++GKA+ + L+ K
Sbjct: 16 YSCVLNCCSQALPVDELSRLFDEMLQRGFAPNTITYNVMLDVFGKAKLFRKVRRLYFMAK 195
Query: 393 ENGWPMDFILYNTLL 407
+ G +D I YNT++
Sbjct: 196 KQGL-VDVITYNTII 237
Score = 32.7 bits (73), Expect = 0.21
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 475 TCLIQCLGKAMEIDDLVKVFDISVERGVKPDDRLCGCLLSV 515
+C++ C +A+ +D+L ++FD ++RG P+ +L V
Sbjct: 19 SCVLNCCSQALPVDELSRLFDEMLQRGFAPNTITYNVMLDV 141
Score = 32.3 bits (72), Expect = 0.27
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +1
Query: 312 DGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAV 371
D + + EM G PN + YN +L+ GKA R L+ G+ + T +
Sbjct: 58 DELSRLFDEMLQRGFAPNTITYNVMLDVFGKAKLFRKVRRLYFMAKKQGLV-DVITYNTI 234
Query: 372 IKIYGK 377
I YGK
Sbjct: 235 IAAYGK 252
Score = 29.3 bits (64), Expect = 2.3
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1
Query: 439 YTAMLNIYGSEGAVDKAMKLFEEMSKFGIELNVMGCTCLIQCLGKAMEIDDLVKVFDISV 498
Y+ +LN VD+ +LF+EM + G N + ++ GKA + +++ ++
Sbjct: 16 YSCVLNCCSQALPVDELSRLFDEMLQRGFAPNTITYNVMLDVFGKAKLFRKVRRLYFMAK 195
Query: 499 ERGV 502
++G+
Sbjct: 196 KQGL 207
>AV771187
Length = 484
Score = 41.6 bits (96), Expect = 4e-04
Identities = 23/72 (31%), Positives = 40/72 (54%)
Frame = -3
Query: 384 ALELWKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAML 443
ALEL++ MK+ G + + Y++L+ + I+ A + RDM++ H P S SYT ++
Sbjct: 227 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 48
Query: 444 NIYGSEGAVDKA 455
+ G V +A
Sbjct: 47 HALCEAGRVAEA 12
Score = 31.6 bits (70), Expect = 0.46
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -3
Query: 349 ARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMK--ENGWPMDFILYNTL 406
A LFE+M G APN T ++I+ Y A+E+ + M+ +G P Y +
Sbjct: 227 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS-SSYTPI 51
Query: 407 LNMCADVGLIEEA 419
++ + G + EA
Sbjct: 50 IHALCEAGRVAEA 12
Score = 27.3 bits (59), Expect(2) = 0.37
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 452 VDKAMKLFEEMSKFGIELNVMGCTCLIQCLGKAMEIDDLVKV 493
+ +A++LFE+M K G N + LI+ EID V+V
Sbjct: 236 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 111
Score = 23.1 bits (48), Expect(2) = 0.37
Identities = 8/26 (30%), Positives = 15/26 (56%)
Frame = -2
Query: 432 CKPDSWSYTAMLNIYGSEGAVDKAMK 457
C PD+++YT +++ Y G + K
Sbjct: 435 CPPDAFTYTILISSYCRHGILTGCRK 358
>TC13038
Length = 419
Score = 38.9 bits (89), Expect = 0.003
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 303 KMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAG---KPGFARSLFEEMIDS 359
K+ E+ ++ + +EMKS + PN V YNTLL+A K G + +++++M +
Sbjct: 12 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 191
Query: 360 GIAPNEKTLTAVIK 373
G PN+ L +I+
Sbjct: 192 GYKPNDYYLEELIE 233
>BP063629
Length = 525
Score = 38.5 bits (88), Expect = 0.004
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +1
Query: 327 QPNLVVYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALE 386
QP+L YN +++A K G A SLF+++ + G+ P+ T V+K G +
Sbjct: 277 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 456
Query: 387 LWKRMKENGWPMDFILYNTLLNM 409
+ + ++G D + N+L++M
Sbjct: 457 VHAFVIKSGLEFDAYVCNSLMDM 525
Score = 35.8 bits (81), Expect = 0.024
Identities = 20/76 (26%), Positives = 38/76 (49%)
Frame = +1
Query: 403 YNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEM 462
YN ++ A G A +LF+ +++ + PD+++Y +L G G V + K+ +
Sbjct: 295 YNVMIKAFAKKGSFRRAISLFQQLRE-DGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFV 471
Query: 463 SKFGIELNVMGCTCLI 478
K G+E + C L+
Sbjct: 472 IKSGLEFDAYVCNSLM 519
>AV427280
Length = 268
Score = 38.1 bits (87), Expect = 0.005
Identities = 23/84 (27%), Positives = 44/84 (52%)
Frame = +3
Query: 383 DALELWKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAM 442
++L ++MKE G+ + + YN ++ + A E+ + MK+ + PD +SY
Sbjct: 3 ESLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKE-DGVSPDIFSYRVC 176
Query: 443 LNIYGSEGAVDKAMKLFEEMSKFG 466
+N YG+ ++ KL EE+ + G
Sbjct: 177 INSYGARSDLENMEKLLEEIEREG 248
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,418,724
Number of Sequences: 28460
Number of extensions: 175668
Number of successful extensions: 1250
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of query: 715
length of database: 4,897,600
effective HSP length: 97
effective length of query: 618
effective length of database: 2,136,980
effective search space: 1320653640
effective search space used: 1320653640
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Medicago: description of AC146791.8