BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146789.11 - phase: 0
(998 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8917 similar to UP|AAH64262 (AAH64262) MGC76273 protein, parti... 40 0.002
TC8031 similar to UP|Q9FR33 (Q9FR33) Ripening regulated protein ... 36 0.026
TC14193 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive elemen... 36 0.026
TC8142 UP|BAD11133 (BAD11133) Glutamate-rich protein, complete 35 0.077
TC13166 similar to UP|Q94G16 (Q94G16) HCF106, partial (20%) 34 0.10
TC8412 weakly similar to UP|Q9LW00 (Q9LW00) Genomic DNA, chromos... 34 0.10
TC19319 similar to UP|Q9SJF3 (Q9SJF3) T27G7.7, partial (10%) 34 0.13
TC17487 UP|CAE45597 (CAE45597) SAR DNA-binding protein-like prot... 33 0.17
TC10133 similar to UP|Q9LSS5 (Q9LSS5) Myosin heavy chain-like, p... 33 0.22
TC10144 similar to UP|Q93YH8 (Q93YH8) HMG I/Y like protein, part... 33 0.22
TC17002 homologue to UP|RIR2_TOBAC (P49730) Ribonucleoside-dipho... 33 0.29
TC14791 similar to UP|Q9LJ04 (Q9LJ04) ESTs AU082210(C53655), par... 33 0.29
TC8393 weakly similar to GB|AAM61124.1|21536792|AY084557 prenyla... 33 0.29
TC16003 similar to UP|WR17_ARATH (Q9SJA8) Probable WRKY transcri... 32 0.65
TC14845 31 0.85
TC20232 31 0.85
TC13322 similar to UP|Q9ZS13 (Q9ZS13) RNA helicase (Fragment), p... 31 1.1
TC10631 similar to UP|Q39641 (Q39641) Heat shock protein 70, par... 31 1.1
TC18430 weakly similar to UP|Q7PK82 (Q7PK82) ENSANGP00000025245 ... 31 1.1
TC13747 similar to AAL16128 (AAL16128) AT5g47540/MNJ7_13, partia... 31 1.1
>TC8917 similar to UP|AAH64262 (AAH64262) MGC76273 protein, partial (3%)
Length = 676
Score = 40.0 bits (92), Expect = 0.002
Identities = 35/160 (21%), Positives = 71/160 (43%)
Frame = +2
Query: 723 TNPQNDQTPQRASEVVSEATTSEIPQQQESSTLHNLEKHLGGEMQPTPTKASKTVPEKTV 782
+NP+ ++ P+ E+ +E E Q+ E+ N+EK + + TP + +K++ +
Sbjct: 140 SNPKTNEGPEPVPEIKNEEVKVEQVQESEA----NVEK----KTEETPNEDNKSL---ST 286
Query: 783 LENQQTETQTIPEQTVPEQTVPEQTVPEQAASEQVASDHQTTEQQQQPEPQIIDLTSSDQ 842
L N+ E PE+ V + E+ E+ E + + E+ ++ EP+
Sbjct: 287 LLNENEEEAKKPEEEVQAEPKEEKATTEEVKVETKEVNPKPEEEPKEEEPK--------A 442
Query: 843 QTASNKPSTSQTPIPDTILESEYIDEQLIRLSDEIQTLIL 882
Q KP T + +T + ++ + ++ S IQ L
Sbjct: 443 QVQEEKPKTEEA*S*ETCV*TKVLPGLILYTSTSIQICCL 562
>TC8031 similar to UP|Q9FR33 (Q9FR33) Ripening regulated protein DDTFR10/A
(Fragment), partial (44%)
Length = 1109
Score = 36.2 bits (82), Expect = 0.026
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Frame = +2
Query: 751 ESSTLHNLEKHLGGEMQPTPTKASKTVPEKTVLENQQTETQTIPEQTVPEQTVPEQ--TV 808
E S L ++ HL GE+ P PT + P + + QQ Q E T T P Q +
Sbjct: 119 EISALKQIKLHLLGELSPLPTPKNNQQPPQ---QQQQPWFQQFDEITT-SNTSPTQSSSS 286
Query: 809 PEQAASEQVASDHQTTEQQQQP------EPQIIDLTS--SDQQTASNKPS 850
++S ++ DH Q Q P +P IDL + + Q + KPS
Sbjct: 287 DSSSSSSNISLDHYFDTQNQLPLFEFEFKPHPIDLQTPVAPPQRLARKPS 436
>TC14193 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive element binding
factor 4-like protein, partial (50%)
Length = 1128
Score = 36.2 bits (82), Expect = 0.026
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Frame = +3
Query: 587 TLLSQALKNKQASGATSSEPVSKAPE--AVHPEAQSSGISSKTDIYTQIPTLPSSPSSSS 644
T L +K+ A SS V+KA A A ++ +S+K+ I+ PS+++
Sbjct: 9 TYLHSLIKSIIMRKAPSSTTVTKARNTAAATTAAATTAVSAKSKIH--------KPSNNA 164
Query: 645 TESD-----DQPFSQHIEKLLKTKPTKLTDFGTFDYEQTQIEFSKNRIKLCEKFNLPATH 699
TE +P+ ++ ++ GTFD T E ++ +F P
Sbjct: 165 TEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFD---TAEEAARAYDAAARQFRGPKAK 335
Query: 700 PLYPEIPEP--------VSVQHPEPNQEPNQTNPQNDQTPQR 733
+P+ P P V V + + NQ P+Q++ TP+R
Sbjct: 336 TNFPQSPSPDNNTGPNDVVVANVKANQSPSQSSTVESSTPER 461
>TC8142 UP|BAD11133 (BAD11133) Glutamate-rich protein, complete
Length = 999
Score = 34.7 bits (78), Expect = 0.077
Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Frame = +1
Query: 732 QRASEVVSEATTSEIPQQQESSTLHNLEKHLGGEMQPTPTK-----------------AS 774
Q AS V++ + + Q+ E + + +++ + QP T+ A+
Sbjct: 82 QMASVEVAQQAPTTVVQENEPTEVTKIQETIPEPEQPAATEVAAPEQPAAEVPAPAEPAT 261
Query: 775 KTVPEKTVLENQQTETQT----IPEQTVP----EQTVPEQTVPEQAASEQVASDHQTTEQ 826
+ E+T E ++TET+T PE P + V E+ PE+ E ++ +T E
Sbjct: 262 EEPKEETTEEPKETETETEAPVAPETQDPLEVENKEVTEEAKPEEVKPETEKTEEKTEEP 441
Query: 827 QQQPEPQIIDLTSSDQQTASNKPS 850
+ + + S+ NKP+
Sbjct: 442 KTEEPAATTETESAAPVEEENKPA 513
>TC13166 similar to UP|Q94G16 (Q94G16) HCF106, partial (20%)
Length = 504
Score = 34.3 bits (77), Expect = 0.10
Identities = 24/84 (28%), Positives = 37/84 (43%), Gaps = 6/84 (7%)
Frame = +1
Query: 720 PNQTNPQNDQTPQRAS------EVVSEATTSEIPQQQESSTLHNLEKHLGGEMQPTPTKA 773
P +P Q P RA ++ E + QQQ+ T E L ++QP K
Sbjct: 4 PIAVDPDGTQDPSRAYSSEEYLKITEEQLKASAAQQQQGQTPPRKEGELEPQIQPLAAKE 183
Query: 774 SKTVPEKTVLENQQTETQTIPEQT 797
+ T TV Q+ E++TIP+ +
Sbjct: 184 TAT----TVSPPQKPESETIPQDS 243
>TC8412 weakly similar to UP|Q9LW00 (Q9LW00) Genomic DNA, chromosome 3, P1
clone: MSJ11, partial (39%)
Length = 1403
Score = 34.3 bits (77), Expect = 0.10
Identities = 28/144 (19%), Positives = 61/144 (41%), Gaps = 1/144 (0%)
Frame = +3
Query: 705 IPEPVSVQHPEPNQEPNQTNPQNDQTPQRASEVVSEATTSEIPQQQESSTLHNLEKHLGG 764
+ E VS++ P P+ + P+ TP++ V + T EI +++ L+ H GG
Sbjct: 105 VEETVSLELPAPSGWQKKFFPKKSGTPKKNEIVFTAPTGEEITSKKQLE--QYLKAHPGG 278
Query: 765 EMQPTPTKASKTVPEKTVLENQQTETQTIPEQTVPEQTVPEQTVPEQAAS-EQVASDHQT 823
+ P ++ +++ + PE P++ + ++ AS E+ + +
Sbjct: 279 PAASEFDWGTGETPRRSARISEKVKVTPTPESDPPKKRGKRSSASKKDASGEEEKEETKD 458
Query: 824 TEQQQQPEPQIIDLTSSDQQTASN 847
E Q+ E + + D+ A +
Sbjct: 459 VEMQEAGETKDAVKENQDENKAED 530
>TC19319 similar to UP|Q9SJF3 (Q9SJF3) T27G7.7, partial (10%)
Length = 475
Score = 33.9 bits (76), Expect = 0.13
Identities = 25/85 (29%), Positives = 36/85 (41%), Gaps = 9/85 (10%)
Frame = +1
Query: 770 PTKASKTVPEKTVLENQQTETQTIPEQTVPEQTVPEQTVPEQAASEQVASDHQTTE---- 825
P ++S T+P T L T T+P +P + +P+ ASE +S +TT+
Sbjct: 172 PYQSSATIP--TPLVPAHAATPTLPTLQIPSLSASTPLIPQHDASESFSSSSRTTKLVNP 345
Query: 826 -----QQQQPEPQIIDLTSSDQQTA 845
P II L SS TA
Sbjct: 346 SSFVVPPPTSSPVIIPLVSSSTPTA 420
>TC17487 UP|CAE45597 (CAE45597) SAR DNA-binding protein-like protein, complete
Length = 1794
Score = 33.5 bits (75), Expect = 0.17
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Frame = +1
Query: 354 KKKISLKDVPEEMYGGDLPVAKDRKSKKKQITKEE---YLADDATEKGAQKHQKAKKEKS 410
+K S D D K K KKK+ +E+ LAD+ ++ + +K KK+K
Sbjct: 1471 QKSDSAMDEDTHEPSADKKKEKKEKKKKKEKNEEKDVPLLADEDGDEEKEVVKKEKKKKR 1650
Query: 411 ALSTIQEEVENLDEVSLIRKRTRSAQETAEQLASEQVTSEQADSEKPQSPKKKRE 465
ST E++N D+ +K+ + E E S + S+K KK +
Sbjct: 1651 KESTENVELQNGDDAGEKKKKRKKHAEPEE--------SAEMPSKKKGKKKKSED 1791
>TC10133 similar to UP|Q9LSS5 (Q9LSS5) Myosin heavy chain-like, partial
(34%)
Length = 1827
Score = 33.1 bits (74), Expect = 0.22
Identities = 35/138 (25%), Positives = 68/138 (48%), Gaps = 8/138 (5%)
Frame = +1
Query: 472 KRKRSSISRNLKTAEGRREEMMEELQDNWE-EESSPKKAKRTIHT--ETIVMPSFEASEE 528
+RKR S L++ + ++ +++++D ES K+A++ E ++ S + E
Sbjct: 25 ERKRPSRISELESQISQLQDDLKKVRDQLILTESCKKQAQQDAQDSKEQLLALSAKLEES 204
Query: 529 QKQYAREYSA--SKITERKRMKELYEKQRDERLKAAGYVPTPDIAALAS---ELEQETVQ 583
QKQY + ++ITE +++ E + R L+A+ + D AALAS E++ VQ
Sbjct: 205 QKQYLELCTTEEARITELQKITEECNRTRQSELEASQKHLSVDSAALASAANEIQLLKVQ 384
Query: 584 YGATLLSQALKNKQASGA 601
++++ A A
Sbjct: 385 LELVANCESVQTHHAESA 438
>TC10144 similar to UP|Q93YH8 (Q93YH8) HMG I/Y like protein, partial (8%)
Length = 600
Score = 33.1 bits (74), Expect = 0.22
Identities = 20/56 (35%), Positives = 28/56 (49%), Gaps = 11/56 (19%)
Frame = +3
Query: 786 QQTETQTIPEQTVPEQTVPEQTVP--EQAASEQVASDHQTTE---------QQQQP 830
QQ + Q +P++ P+Q VP+Q VP +Q +Q A Q QQQQP
Sbjct: 99 QQQQPQVLPQEAQPQQQVPQQQVPPLQQVPPQQPAYQQQYPPFHMQQYHHLQQQQP 266
Score = 27.7 bits (60), Expect = 9.4
Identities = 16/51 (31%), Positives = 24/51 (46%), Gaps = 5/51 (9%)
Frame = +3
Query: 785 NQQTETQTIPEQ----TVPEQTVPEQTVPEQAASE-QVASDHQTTEQQQQP 830
N +T+P+Q +P++ P+Q VP+Q Q Q QQQ P
Sbjct: 69 NAPLRDETLPQQQQPQVLPQEAQPQQQVPQQQVPPLQQVPPQQPAYQQQYP 221
>TC17002 homologue to UP|RIR2_TOBAC (P49730) Ribonucleoside-diphosphate
reductase small chain (Ribonucleotide reductase) (R2
subunit) , partial (45%)
Length = 580
Score = 32.7 bits (73), Expect = 0.29
Identities = 38/161 (23%), Positives = 60/161 (36%), Gaps = 10/161 (6%)
Frame = -2
Query: 680 IEFSKNRIKLCEKFNLPATHPLYPEIPEPVSVQHPEPNQEPNQTNPQNDQTPQRASEVVS 739
+ SKN IKL E + HP S H + + T+ + TPQRAS+
Sbjct: 495 LSLSKN-IKLYESATFKSPHP---------S*THEPHHSHSS*TSQKPSDTPQRASQRNG 346
Query: 740 EATTSEIPQQQESSTLHNLEKHLGGEMQPTPTKASKTVPEKTVLENQQTETQTIPEQTVP 799
+ ++ ++ + H+ H Q PT T P++T + + P T
Sbjct: 345 SSPATKSTPSNQTDSAHHTPSH----TQAHPT----TDPQQTQYTDSSNPHSSPPTHTAA 190
Query: 800 EQT-VPEQTVPEQA---------ASEQVASDHQTTEQQQQP 830
+T P Q+ A AS AS T + + P
Sbjct: 189 RRTQTPSQSPLRHAQSPSRAPR*ASSSAASTTSTRNRSEAP 67
>TC14791 similar to UP|Q9LJ04 (Q9LJ04) ESTs AU082210(C53655), partial (37%)
Length = 1779
Score = 32.7 bits (73), Expect = 0.29
Identities = 23/125 (18%), Positives = 47/125 (37%)
Frame = +2
Query: 712 QHPEPNQEPNQTNPQNDQTPQRASEVVSEATTSEIPQQQESSTLHNLEKHLGGEMQPTPT 771
+ PE + + PQ D + + + ATT PQQQ+ + N + +
Sbjct: 224 EEPEEQDQETEDQPQIDDAVEEEQDPEAPATTESEPQQQQETLEDN------ADAPNESS 385
Query: 772 KASKTVPEKTVLENQQTETQTIPEQTVPEQTVPEQTVPEQAASEQVASDHQTTEQQQQPE 831
A+ ++V + E+ + + P + + E EQ+ H +Q +
Sbjct: 386 AAAAAAASESVANGSNNNEEEEEEEDLELEEEPVERLLEPFTREQL---HSLVKQAAEKY 556
Query: 832 PQIID 836
P ++
Sbjct: 557 PDFVE 571
>TC8393 weakly similar to GB|AAM61124.1|21536792|AY084557 prenylated Rab
receptor 2 {Arabidopsis thaliana;}, partial (78%)
Length = 1012
Score = 32.7 bits (73), Expect = 0.29
Identities = 26/94 (27%), Positives = 38/94 (39%), Gaps = 11/94 (11%)
Frame = +1
Query: 696 PATHPLYPEIPEPVSVQHPEPNQEPNQTNPQNDQTPQRASEVVS-----EATTSEIPQQQ 750
P P +P P P ++HP P+ P+ T P P S S A+ S +P +
Sbjct: 52 PCPPPRHPSSPSPTPLRHPPPSHLPDPT-PLPPPPPSAPSSTTSPNPSATASLSAVPGRS 228
Query: 751 ESSTLHNLEKHLGGEMQP------TPTKASKTVP 778
H+ ++ M P +PT AS T P
Sbjct: 229 LPIAPHSPNRN-PSPMPPSASARISPTSASTTTP 327
>TC16003 similar to UP|WR17_ARATH (Q9SJA8) Probable WRKY transcription
factor 17 (WRKY DNA-binding protein 17), partial (20%)
Length = 446
Score = 31.6 bits (70), Expect = 0.65
Identities = 32/143 (22%), Positives = 53/143 (36%)
Frame = +2
Query: 596 KQASGATSSEPVSKAPEAVHPEAQSSGISSKTDIYTQIPTLPSSPSSSSTESDDQPFSQH 655
K + +SS + + EA S G+ S + + + S SSSS+ S ++H
Sbjct: 5 KTSFSCSSSSTMKMEEQIAIQEAASVGLKSMEHLIRILSSQTPSFSSSSSSSSSSSHNRH 184
Query: 656 IEKLLKTKPTKLTDFGTFDYEQTQIEFSKNRIKLCEKFNLPATHPLYPEIPEPVSVQHPE 715
L T++TDF ++Q ++ + P+ P P P+S PE
Sbjct: 185 RLDLNNLDCTEITDFTVSKFKQVINLLNRTGHARFRQAPSPSPAP-----PPPLSQPQPE 349
Query: 716 PNQEPNQTNPQNDQTPQRASEVV 738
N T A V+
Sbjct: 350 KFNSHQFNNHHRSTTLDFAKPVM 418
>TC14845
Length = 1110
Score = 31.2 bits (69), Expect = 0.85
Identities = 22/82 (26%), Positives = 37/82 (44%)
Frame = -3
Query: 684 KNRIKLCEKFNLPATHPLYPEIPEPVSVQHPEPNQEPNQTNPQNDQTPQRASEVVSEATT 743
+N+ + C+ A P E P +HP NQ+P + P ++TP +S +A
Sbjct: 694 RNQEQWCQARTRTAHEPERIEQP-----RHPPRNQKPATSGPATEKTPPPSSPWEPDARR 530
Query: 744 SEIPQQQESSTLHNLEKHLGGE 765
S+ ++ T H +HL E
Sbjct: 529 SKTESTNQART-HPEHQHLPSE 467
>TC20232
Length = 601
Score = 31.2 bits (69), Expect = 0.85
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Frame = -2
Query: 603 SSEPVSKAPEAVHPEAQSS--GI----SSKTDIYTQIPTLPS--SPSSSSTESDDQPFSQ 654
SS+P S+ P+ P S G+ S+ T ++Q+ T P+ SP+ S+++ + QP
Sbjct: 381 SSKPHSRVPQTTXPVVPPSTXGVAHTSSTHTYSHSQLHTSPTPQSPTCSASKQNSQP--- 211
Query: 655 HIEKLLKTKPTKLTDFGTFDYEQTQIEFSKNRIKLCEKFNLPATHPLYPEIPEPVSVQHP 714
K+ PT T Q + S PA+HPL P P P P
Sbjct: 210 ------KSPPTNPT-------HQNHL*TSPTAP--------PASHPLPPSFPNPTPP*PP 94
Query: 715 --EPNQEPNQTNP 725
P P++ P
Sbjct: 93 TASPLSRPHRPPP 55
>TC13322 similar to UP|Q9ZS13 (Q9ZS13) RNA helicase (Fragment), partial (7%)
Length = 528
Score = 30.8 bits (68), Expect = 1.1
Identities = 27/89 (30%), Positives = 39/89 (43%)
Frame = +3
Query: 443 ASEQVTSEQADSEKPQSPKKKREAALQTIKRKRSSISRNLKTAEGRREEMMEELQDNWEE 502
ASE V E +S + QS KKK+ K+ + KT+ R+ E ++ N E
Sbjct: 81 ASEPVADEAPNSPELQSEKKKK-------KKNKDKHQNGEKTSPKRKLEELD--NQNGTE 233
Query: 503 ESSPKKAKRTIHTETIVMPSFEASEEQKQ 531
KK K+ H S E +EE K+
Sbjct: 234 SEKKKKKKKEKHDN----KSEENAEETKE 308
>TC10631 similar to UP|Q39641 (Q39641) Heat shock protein 70, partial (13%)
Length = 545
Score = 30.8 bits (68), Expect = 1.1
Identities = 24/83 (28%), Positives = 34/83 (40%)
Frame = +1
Query: 547 MKELYEKQRDERLKAAGYVPTPDIAALASELEQETVQYGATLLSQALKNKQASGATSSEP 606
+KE E + E A T DI + L QE +Q G Q+L N+ + P
Sbjct: 25 VKEKVEAKLGELKDAISGGSTQDIKDAMAALNQEVMQIG-----QSLYNQPGAATGPGGP 189
Query: 607 VSKAPEAVHPEAQSSGISSKTDI 629
PE+ E+ SSG D+
Sbjct: 190 TPPGPESGSSESPSSGKGPDGDV 258
>TC18430 weakly similar to UP|Q7PK82 (Q7PK82) ENSANGP00000025245 (Fragment),
partial (13%)
Length = 599
Score = 30.8 bits (68), Expect = 1.1
Identities = 26/106 (24%), Positives = 46/106 (42%), Gaps = 6/106 (5%)
Frame = +3
Query: 734 ASEVVSEATTSEIPQQQESSTLHNLEKHLGGEMQPTPTKASKTVPEKTVLENQQTETQTI 793
+S+ SE++T+ SS ++ + G KA K + + + QTI
Sbjct: 27 SSDTESESSTAS----DSSSGDEKADRRVSGRKTDADNKAKKNIDLRKQSSSLPLRIQTI 194
Query: 794 PEQTVPE--QTVPEQTVPEQAASEQ----VASDHQTTEQQQQPEPQ 833
PEQ + +TV +Q+ E S + V + H+T + +P Q
Sbjct: 195 PEQEIDPKVRTVDKQSHEEGEMSPENGTFVNNGHETRAELSKPAKQ 332
>TC13747 similar to AAL16128 (AAL16128) AT5g47540/MNJ7_13, partial (44%)
Length = 659
Score = 30.8 bits (68), Expect = 1.1
Identities = 23/86 (26%), Positives = 38/86 (43%), Gaps = 7/86 (8%)
Frame = +3
Query: 683 SKNRIKLCEKFNLPATHPLYPEIPEPVSVQHPEPN----QEPNQTNPQNDQTPQRASEVV 738
SKN+I +K P THP P P P PN + PN++ ++ + +
Sbjct: 15 SKNKINNSQKKKKPKTHPSPSPSPSP-----PSPNSTRIRNPNRSVGLEEEEEEDEGSLQ 179
Query: 739 SEATTS---EIPQQQESSTLHNLEKH 761
++AT S P Q+ S L + ++
Sbjct: 180 AQATHSC*NRAPDQRSSPLLRSSSRN 257
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.309 0.127 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,563,455
Number of Sequences: 28460
Number of extensions: 170770
Number of successful extensions: 1219
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of query: 998
length of database: 4,897,600
effective HSP length: 99
effective length of query: 899
effective length of database: 2,080,060
effective search space: 1869973940
effective search space used: 1869973940
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146789.11