TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146758.5 - phase: 0 /pseudo
         (1461 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AU089582                                                               37  6e-06
AV418552                                                               31  1.2
TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transc...    31  1.6
TC8125                                                                 30  3.6
TC10367                                                                29  4.7
AV415922                                                               29  4.7
AV767028                                                               29  6.1
TC15341 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich pro...    29  6.1
AV408212                                                               28  8.0
BP061900                                                               28  8.0

>AU089582 
          Length = 383

 Score = 37.0 bits (84), Expect(2) = 6e-06
 Identities = 29/65 (44%), Positives = 33/65 (50%)
 Frame = +3

Query: 1155 RFIPRRL*SCMVFLRASCQIEIQDLLLDFGKVCKRPWVRS*D*VRRIIHRQMVSRRGQFS 1214
            RF   RL  CMV+L    QIE  +    FG + K  W   * *V   I + MVS RG F 
Sbjct: 27   RFTWMRLFPCMVYLCL*FQIEELNSHHIFGGLFKLLWELD*K*VPLFILKLMVSPRGLFR 206

Query: 1215 C*RIC 1219
             *RIC
Sbjct: 207  S*RIC 221



 Score = 31.2 bits (69), Expect(2) = 6e-06
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +1

Query: 1231 GIVIFR*SSSLIIIVTILVLEWHRSRLCMVGDA 1263
            GI I  * +S III   L   WH  + CMVGDA
Sbjct: 256  GISICL*WNSHIIIAIGLAFRWHHLKPCMVGDA 354


>AV418552 
          Length = 386

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 10  CCVSCCSTSCCPSCGTTT*RKCW 32
           CCVSC   SCC SC +     CW
Sbjct: 291 CCVSCSCASCCWSCASCC---CW 232


>TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transcription
           factor PosF21 (AtbZIP59), partial (17%)
          Length = 570

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 11/24 (45%), Positives = 12/24 (49%)
 Frame = -2

Query: 10  CCVSCCSTSCCPSCGTTT*RKCWC 33
           CC+ CC   CC  C    *  CWC
Sbjct: 194 CCIGCCCCCCC--C*IGC*N*CWC 129


>TC8125 
          Length = 1373

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -1

Query: 73  GYAVHGGSESAIWYSSAGRGS**LVGCSSAYPWAGGSCCDLGCFQERVPEKILSGRCSRE 132
           G +  GG+ES  W    G+     V   + +P   G C D  C   ++ EK    RC+ E
Sbjct: 359 GQSSDGGAESEPWRCGRGKTK---VSQPTTFP--AGGCLDSAC*SRKIQEKTEGQRCN-E 198

Query: 133 ERDRIP 138
            +D  P
Sbjct: 197 LQDFFP 180


>TC10367 
          Length = 527

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 5   GWKKRCCVSCCSTSCCPSCGTTT*RKCW 32
           GWK+RC  +CC +     CG   *  C+
Sbjct: 144 GWKRRCSWNCCGSGMV-GCGVRN*EPCF 224


>AV415922 
          Length = 422

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 10  CCVSCCSTSCCPSCGTTT*RKCWC 33
           CC  CC   CC  C      +CWC
Sbjct: 232 CCCCCC---CCCCCCCCCCHRCWC 170


>AV767028 
          Length = 514

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 20/65 (30%), Positives = 25/65 (37%), Gaps = 4/65 (6%)
 Frame = -3

Query: 77  HGGSESAIWYSSAGRGS**LVGCSSAYPWAGGSCCDLG----CFQERVPEKILSGRCSRE 132
           H G     W  S+G G            W GG CC LG    C+      K+   +CS  
Sbjct: 506 HSG*RRQQWNRSSGGG------------WHGGYCCSLGSRC*CW------KVSGYKCSSG 381

Query: 133 ERDRI 137
            RDR+
Sbjct: 380 PRDRV 366


>TC15341 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich protein,
           partial (33%)
          Length = 1002

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 3   GNGWKKRCCVSCCSTSCC 20
           GN W   CC  CC   CC
Sbjct: 917 GNCWGHCCCCCCCCCCCC 864


>AV408212 
          Length = 362

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = -2

Query: 10  CCVSCCSTSCCPSCGTTT*RKCWCER 35
           CC  CC   CC  C       C C R
Sbjct: 142 CCCCCCCCCCCCCCCCCWRAACLCNR 65


>BP061900 
          Length = 495

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +1

Query: 10  CCVSCCSTSCC 20
           CC SCCS SCC
Sbjct: 337 CCWSCCSCSCC 369


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.371    0.167    0.662 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,168,494
Number of Sequences: 28460
Number of extensions: 480645
Number of successful extensions: 7946
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4167
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 3033
Number of HSP's gapped (non-prelim): 5192
length of query: 1461
length of database: 4,897,600
effective HSP length: 102
effective length of query: 1359
effective length of database: 1,994,680
effective search space: 2710770120
effective search space used: 2710770120
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.8 bits)
S2: 61 (28.1 bits)