BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146755.8 + phase: 0 /pseudo
(1711 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC18710 159 3e-39
AV780705 118 7e-27
TC18198 weakly similar to UP|Q9XGZ5 (Q9XGZ5) T1N24.20 protein, p... 109 4e-24
BP060613 101 1e-21
AV767121 89 6e-18
CN825682 79 8e-15
CN825238 77 3e-14
AV411435 75 9e-14
AU251850 74 1e-13
TC19704 weakly similar to UP|Q9SZ87 (Q9SZ87) RNA-directed DNA po... 73 4e-13
AV780221 71 1e-12
TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%) 65 9e-11
AV412895 52 6e-07
BP085058 52 8e-07
AV418280 51 1e-06
CB826728 50 4e-06
TC12829 49 5e-06
AV768875 49 5e-06
BE122611 49 5e-06
BP053577 49 7e-06
>TC18710
Length = 843
Score = 159 bits (403), Expect = 3e-39
Identities = 85/226 (37%), Positives = 128/226 (56%), Gaps = 1/226 (0%)
Frame = +2
Query: 791 FSMQADKCPGPDGFNPGFYQNFWNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDA 850
F ++ + G DG N FYQ ++ + A +LE P +N T + LIPK
Sbjct: 161 FLLETSQPRGMDGMNGLFYQKNGDVVKDSVT*AILAFLERAEIPNEINETLVTLIPKVPH 340
Query: 851 QTTMKDWRPIALCNVVYKMVAKVLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELI 910
++ +RPI+ C +YK+++K+ RLK+ + IS QS F+ GR I DN L+ E
Sbjct: 341 PESINQFRPISGCTFLYKVISKIFVARLKDAMPDLISPMQSGFIQGRQIQDNLLIVQEAF 520
Query: 911 HYMKAKTKGSQGDVALKLDISKAYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTV 970
H + + +KLD++KAYDR++W++L ++ FS W++ IM+ V V Y
Sbjct: 521 HAINRPGALGRNHSIIKLDMNKAYDRVEWKFLESSLLAFGFSTNWVKMIMILVSGVSYNY 700
Query: 971 LVNGVQVGP-LIPGRGIRQGDPLSPYLFILCAEGLSALIRDAERRG 1015
+NGV VGP L+P RG+RQGDP SPYLF+ E LS LI+++ G
Sbjct: 701 KINGV-VGPKLLPQRGLRQGDPFSPYLFLFTMEVLSLLIQNSFNMG 835
>AV780705
Length = 524
Score = 118 bits (296), Expect = 7e-27
Identities = 51/145 (35%), Positives = 91/145 (62%)
Frame = -2
Query: 1101 GKYLGLPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSI 1160
G YLGLP++ GR+K + ++++++ ++ W L+QAG+E+LIK+++Q+IPSY M+I
Sbjct: 490 GHYLGLPAIWGRNKSHSLVWIEEKVKEKLEGWKETLLNQAGKEVLIKAIIQAIPSYAMTI 311
Query: 1161 FLLPSTFIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMI 1220
P TF + ++ FWW + + + K GG+GF+ LR NLA +
Sbjct: 310 VHFPKTFCNSLYALVADFWWKSQGEGAVEYTGAVGTK*PLSKEKGGVGFRDLRTQNLAFL 131
Query: 1221 GKQAWKLISNPDSLITKLLKAKYFP 1245
+QAW++++NP++L +++K+ YFP
Sbjct: 130 ARQAWRVLTNPEALWVRVMKSLYFP 56
Score = 44.3 bits (103), Expect = 2e-04
Identities = 20/77 (25%), Positives = 37/77 (47%)
Frame = -1
Query: 1183 NSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKLLKAK 1242
+ SRG+HW SW+++++ GG G + L + + + P L+ +
Sbjct: 245 SGGRSRGIHWRSWDKMTLE*GKGGRGLQGLENSEPCLPS*ASLACANKPGGLVGTCHEIS 66
Query: 1243 YFPHSDYFSASIGHNPS 1259
FP+ + A++G NPS
Sbjct: 65 LFPYPSFMFAALGRNPS 15
>TC18198 weakly similar to UP|Q9XGZ5 (Q9XGZ5) T1N24.20 protein, partial
(14%)
Length = 592
Score = 109 bits (272), Expect = 4e-24
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Frame = -3
Query: 700 KEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNYFSHLFTK--LSST 757
K GD NT+FFHA+ RR NRI +++++G + ++ A NYFS +++ L
Sbjct: 575 K*GDHNTRFFHASTIQRRDFNRILKIKDAHGIWVEGQKKVNEAAVNYFSDIYSSSPLQYL 396
Query: 758 RADVISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGPDGFNPGFYQNFWNMCG 817
R + ++ + ++D N L A + +E K A FSM K PG DG N FYQ +
Sbjct: 395 R-ECLAPIPKLVTDRLNHKLCAQVSTDEIKEAVFSMGDLKAPGMDGINGLFYQQNREIVK 219
Query: 818 SEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIALCNVVYKMVAKVLANR 877
++++ A ++ ++G P LN T + LIPK ++ +RPI+ C+ +YK+++K++ R
Sbjct: 218 NDVNNAILDFFDHGELPVELNETLVTLIPKIPHAEAIQQFRPISCCSFIYKVISKIIVAR 39
Query: 878 LKNVLDKCIS 887
LK + IS
Sbjct: 38 LKPDMVNLIS 9
>BP060613
Length = 378
Score = 101 bits (251), Expect = 1e-21
Identities = 45/108 (41%), Positives = 67/108 (61%)
Frame = +1
Query: 1179 WWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKL 1238
WW +S +RG+HW W+ L+ K GG+GFK N A++ KQAW+++ NPD+L ++
Sbjct: 46 WW--SSKGTRGVHWRKWDLLTELKDEGGLGFKDFEIQNQALLAKQAWRILHNPDALWVQI 219
Query: 1239 LKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIGTGETI 1286
LKA YFPH D+ + S+VW SL R+ L +W +G+GET+
Sbjct: 220 LKALYFPHHDFLQTTKRTGASWVWSSLLHGRELLLKQGQWQLGSGETV 363
>AV767121
Length = 525
Score = 89.0 bits (219), Expect = 6e-18
Identities = 51/171 (29%), Positives = 86/171 (49%), Gaps = 5/171 (2%)
Frame = +2
Query: 1129 INSWSSRCLSQAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIEKMLNAFWWGHNSANSR 1188
++ W + +S GR LI+SVL ++P + +S F LP +++ F WG S N
Sbjct: 2 LSKWKQKTVSFGGRIFLIQSVLTALPLFFLSFFKLPIGVGKSCVRLMRNFLWG-GSENEN 178
Query: 1189 GMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSD 1248
+ + W + PK GG+G K L FN A++GK W+ ++ PDSL ++++A+ D
Sbjct: 179 KIA*VKWTDVCKPKELGGLGIKDLFTFNKALLGK*RWRYLTEPDSLWRRVIEAQ----PD 346
Query: 1249 YFSASIGHNPSYVWRSLWSV-----RDYLKHGLKWSIGTGETISVWNQPWL 1294
++S S W + S+ + GLK +G G+ W++ WL
Sbjct: 347 HYSCG-----SSWWNDILSLCPEDADGWFSSGLKKLVGEGDQTKFWSEDWL 484
>CN825682
Length = 626
Score = 78.6 bits (192), Expect = 8e-15
Identities = 40/95 (42%), Positives = 52/95 (54%)
Frame = -3
Query: 485 WCVIGDFNDILSSEEKKGRSERAPWLIRGFRQAVLDAGLFDLHMTGYAFTWFKSLGTARA 544
W GDFN+IL +EK+G ++ P I+ FR + A L DL + G FTW +L
Sbjct: 300 WTCYGDFNEILHHQEKEGARDQDPTRIQVFRDFLDGANLMDLELKGCRFTWLSNLRNGLV 121
Query: 545 VEEKLDRALVNSDWCNMFPNAGVECLSTTSSDHYP 579
+E+LDR LVN W +PNA L SSDH P
Sbjct: 120 TKERLDRVLVNWTWRLDYPNATAMALPIISSDHSP 16
>CN825238
Length = 692
Score = 76.6 bits (187), Expect = 3e-14
Identities = 43/132 (32%), Positives = 61/132 (45%), Gaps = 3/132 (2%)
Frame = +3
Query: 1318 LFKPNTKEWNENFIRYVFNAETSNQILQTPLLQSVQVDKATWRFEKNGLYSVRSAYREII 1377
L PN + WN I +F ET+ I PL + WR+ +NG +SVRSAY I
Sbjct: 297 LLIPNARRWNVQLIDQLFPKETAAVIKSIPLGWRTTRNSCLWRWSRNGAFSVRSAYYNIQ 476
Query: 1378 NRNDVLLQHRVPGK--WNIIWNLKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAI 1435
++ W +W +P K+K+F +RV RN +P R L +G+ C
Sbjct: 477 VAKEMQTSSSAASSFPWKKLWRTPVPNKMKHFAYRVARNIIPCRENLQRRGIAVQNECPT 656
Query: 1436 CNNH-EEDGKHL 1446
CN+ E HL
Sbjct: 657 CNHQIPESMSHL 692
>AV411435
Length = 426
Score = 75.1 bits (183), Expect = 9e-14
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Frame = +3
Query: 1343 ILQTPLLQSVQVDKATWRFEKNGLYSVRSAYREI----INRNDVLLQHRVPGK--WNIIW 1396
I+QTP + D+ W F +G YSV+S YR + N +++ P W+ IW
Sbjct: 3 IMQTPFSITGSEDRLFWPFIPSGEYSVKSGYRAVKATQFNLSNLASSSSHPSSFLWHTIW 182
Query: 1397 NLKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACSKSVGC 1456
++P K+++FLWR N +P + L + + C ICN ED H AC +
Sbjct: 183 GAQVPKKVRSFLWRAANNAIPVKRNLKRRNMGRDDFCPICNKGPEDINHALLACEWTRAV 362
Query: 1457 W 1457
W
Sbjct: 363 W 365
>AU251850
Length = 343
Score = 74.3 bits (181), Expect = 1e-13
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Frame = +2
Query: 348 PGPPRKMSFIVWNCRGLGSPSTVPTLKYLVRTYKPEGIFLSETMAALNKIEELKYILSFD 407
P P M + WNCRGLGSP V L+ LVR P+ +FL ET + E++
Sbjct: 20 PTSPTAMKLLSWNCRGLGSPRAVEALQRLVRKEIPQLVFLMETKLKKFETEKISLGFGLS 199
Query: 408 SCFTVDRIG----RGGGLAFLWKNSANCTITNFSQNHIDV 443
+C VD +G R GGLA W S + ++ +FS NHI V
Sbjct: 200 NCLIVDCVGDEKERKGGLAMWWNASVDVSLVSFSGNHIVV 319
>TC19704 weakly similar to UP|Q9SZ87 (Q9SZ87) RNA-directed DNA
polymerase-like protein, partial (3%)
Length = 530
Score = 72.8 bits (177), Expect = 4e-13
Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Frame = -3
Query: 636 LTDWSRNN-NNFRRDISKVQKKIEKLRTHVTAA-NVSYFNSLKNKLDKLLVQDDLFWKQR 693
LT+W N + ++I++++ ++E L+ + + + K +L L Q++LFW QR
Sbjct: 426 LTEWHHQNFSRADKEIAELKNQLEHLQNYSNSGEDWQEIKQRKMRLKDLWRQEELFWSQR 247
Query: 694 AKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNYFSHLF 751
++ W K GD NTKFFHA+ RR+ NRIE +++ GT R + + +++ ++
Sbjct: 246 SRIKWLKSGDKNTKFFHASTVQRRERNRIERIKDMQGTWVRSQLAINRDVPDFYPDIY 73
>AV780221
Length = 461
Score = 71.2 bits (173), Expect = 1e-12
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Frame = +3
Query: 1145 LIKSVLQSIPSYVMSIFLLPST-FIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKT 1203
LI+SVL ++P + + F LP+ F + + F+ G + + W+ W + PK
Sbjct: 9 LIRSVLIALPLFHLPFFKLPTGGFYTNVNN**DPFF-GREVEGGKKIAWVKWSTVCRPKD 185
Query: 1204 FGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWR 1263
GG+G ++L FN A++GK W+++ D L K+L KY +I + S W
Sbjct: 186 EGGLGVQNLGLFNKALLGKWRWRMLKERDGLWYKVLLIKY-------KNAIPQSASSWWN 344
Query: 1264 SLWSV------RDYLKHGLKWSIGTGETISVWNQPWL 1294
L S +++ GL IG G + WN+ WL
Sbjct: 345 DLHSTCFEDGGGGWMQRGLCRRIGEGTEVKFWNENWL 455
>TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%)
Length = 912
Score = 65.1 bits (157), Expect = 9e-11
Identities = 41/125 (32%), Positives = 67/125 (52%)
Frame = -3
Query: 1029 ISHLLFADDCFLFFRASEQEASVMKNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRI 1088
ISHL FAD+ +F + +++ N+L ++ SG N KSE++ T+ N+I
Sbjct: 373 ISHLCFADNLMVFSNGYLESIAIINNVLHIFQHLSGLTPNPAKSEVFILVKETTK--NQI 200
Query: 1089 ATTLGVKQVLGTGKYLGLPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKS 1148
LG K+ + LG+P + + K + K + DR +++ W+ R LS AGR LI S
Sbjct: 199 TNMLGYKEGKLPVR*LGVPQLTTKLKASDCKVLVDRKPSKLQHWTGRSLSYAGRLQLINS 20
Query: 1149 VLQSI 1153
+L S+
Sbjct: 19 ILFSM 5
>AV412895
Length = 405
Score = 52.4 bits (124), Expect = 6e-07
Identities = 35/115 (30%), Positives = 51/115 (43%), Gaps = 6/115 (5%)
Frame = +1
Query: 1392 WNIIWNLKLPPKIKNFLWRVCRNCLPTRMRLISKGV---QCPPTCAICNNHEEDGKHLFF 1448
+N IW + P IK F+WRV + TR L+ + V C +C EE G HL F
Sbjct: 73 FN*IWMVPAPLNIKAFVWRVLLGRIQTRDNLLKRQVIHNALDAICPLCGLAEESGSHLLF 252
Query: 1449 ACSKSVGCWQRLGFWPSIQQIWSHNAFCADIIFSLLQQLDIAH---QQIFAVTLW 1500
+C++S+ W W + A +D LLQ I Q++ T+W
Sbjct: 253 SCAESMLIWYECFAWLGVS-----TAQVSDPKVHLLQFSSIGRSKAQKLGETTIW 402
>BP085058
Length = 452
Score = 52.0 bits (123), Expect = 8e-07
Identities = 34/125 (27%), Positives = 58/125 (46%)
Frame = +2
Query: 1085 QNRIATTLGVKQVLGTGKYLGLPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREI 1144
++R+ + + GKY+ P G K F F DR+ +R+ + L++ R
Sbjct: 83 RDRMVSITSIPFTDNIGKYMSFPIHQGHV*KEDFVFTLDRVISRLAC*KAYLLNKPARLT 262
Query: 1145 LIKSVLQSIPSYVMSIFLLPSTFIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTF 1204
L K VL +I YVM + LP + +I ++ F W N G+ ++WE + K+
Sbjct: 263 LAKPVLSAISMYVMQLNWLPQSICDQICTVVRHFVW----ENVNGIPLVAWETIQSRKSM 430
Query: 1205 GGMGF 1209
G+ F
Sbjct: 431 VGLIF 445
>AV418280
Length = 398
Score = 51.2 bits (121), Expect = 1e-06
Identities = 28/85 (32%), Positives = 38/85 (43%), Gaps = 3/85 (3%)
Frame = -2
Query: 1432 TCAICNNHEEDGKHLFFACSKSVGCWQRLGFWPSIQQIWSHNAFCADIIFSLL---QQLD 1488
TC C EE HLFF C S+G WQ L W I + FS+ +
Sbjct: 391 TCPFCTTVEECSGHLFFTCVFSMGVWQALHRWLGISVALPASTLANFAQFSITARNKNQR 212
Query: 1489 IAHQQIFAVTLWSLWRHRNNKVWNN 1513
+ I+ T+WSLW RN+ ++ N
Sbjct: 211 LGELAIWIATVWSLWIQRNSIIFRN 137
>CB826728
Length = 509
Score = 49.7 bits (117), Expect = 4e-06
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Frame = +1
Query: 1359 WRFEKNGLYSVRSAYREIINRNDVLLQHRVPGK------WNIIWNLKLPPKIKNFLWRVC 1412
W +G YS +S Y I N LL P W +W+ P+ K +WR C
Sbjct: 214 WPGSSDGWYSSKSGYEFIRLENKSLLPSTSPAAAVPSLIWKTVWSASSLPRCKEVMWRAC 393
Query: 1413 RNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFAC 1450
LP R L +G+ P+ +E H+ C
Sbjct: 394 AGYLPVRSALKRRGLDVDPSSPWSGLEDEAEVHVLLTC 507
>TC12829
Length = 448
Score = 49.3 bits (116), Expect = 5e-06
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +3
Query: 1137 LSQAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIEKMLNAFW 1179
L +AGRE+LIKSV ++IP+Y+MS F LP + +IE M+ F+
Sbjct: 261 LYRAGREVLIKSVTKAIPTYIMSCFALPDSICSQIEGMVGKFY 389
Score = 30.0 bits (66), Expect = 3.2
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 1136 CLSQAGREILIKSVLQS-IPSYVMSIFLLPSTFIGEIEKMLNAFWWGHNSANSRGMHWLS 1194
C+ + G+ L + + QS + S + +FL+ F+ ++ L +F W + R +HWL
Sbjct: 262 CIEREGKF*LSR*LKQSQLTSCLALLFLI--LFVLRLKAWLVSFIWS-GDVSRRSIHWLG 432
Query: 1195 WERL 1198
W++L
Sbjct: 433 WKKL 444
>AV768875
Length = 232
Score = 49.3 bits (116), Expect = 5e-06
Identities = 25/67 (37%), Positives = 35/67 (51%)
Frame = +1
Query: 471 WAFLKNLARTSSLPWCVIGDFNDILSSEEKKGRSERAPWLIRGFRQAVLDAGLFDLHMTG 530
W L + + S+PW +IGD N+IL + +G E P + F + D L DL M G
Sbjct: 16 WQHLSTIRASISIPWLLIGDMNEILFPSQVRG-GEFHPNRAQRFATVLDDCNLIDLGMVG 192
Query: 531 YAFTWFK 537
FTWF+
Sbjct: 193 GKFTWFR 213
>BE122611
Length = 357
Score = 49.3 bits (116), Expect = 5e-06
Identities = 25/67 (37%), Positives = 35/67 (51%)
Frame = -3
Query: 1355 DKATWRFEKNGLYSVRSAYREIINRNDVLLQHRVPGKWNIIWNLKLPPKIKNFLWRVCRN 1414
D+ W E NG YS +S Y +I D + R W+++W P K++ FLW V RN
Sbjct: 331 DRILWTEESNGCYSAKSTYNLLIE--DGGNESRF---WSLVWKANAPEKVRFFLWLVGRN 167
Query: 1415 CLPTRMR 1421
LP+ R
Sbjct: 166 ALPSNAR 146
>BP053577
Length = 463
Score = 48.9 bits (115), Expect = 7e-06
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Frame = +3
Query: 1578 GFGACIRDANGNHVISRTECFTPLLDVEMGEAIGLLHAMRWAKDLNLVNMDFETDSKVVV 1637
G G R+ +G + S + + EA+GL M+ A DL + ETD + +
Sbjct: 15 GLGMVARNCDGEVMASACSSPVSISSPLLAEALGLRWTMQLATDLGFRRITLETDC-LQL 191
Query: 1638 ENIYKG--DGVSDFMAIIHDCRHLLMTDLANSDVKFIRRQANSAAHNLAREALNHASFHY 1695
N ++ +G S +II DCR +L++ V F+RR N+ A LAR + +A+ +
Sbjct: 192 FNTWRSQEEGRSYLSSIISDCR-ILISAFDYVSVSFVRRTGNTVADFLARNSDTYANMVW 368
Query: 1696 HLNIPHCIHTLIN 1708
+P + +LI+
Sbjct: 369 VEEVPLTVVSLID 407
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.333 0.142 0.482
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,896,446
Number of Sequences: 28460
Number of extensions: 577009
Number of successful extensions: 4572
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 4449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4553
length of query: 1711
length of database: 4,897,600
effective HSP length: 103
effective length of query: 1608
effective length of database: 1,966,220
effective search space: 3161681760
effective search space used: 3161681760
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 62 (28.5 bits)
Medicago: description of AC146755.8