TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146743.14 + phase: 0 
         (720 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CB826783                                                              199  2e-51
AV410449                                                              144  4e-35
BG662411                                                               82  2e-16
TC13951 weakly similar to UP|Q7XJQ9 (Q7XJQ9) At2g38010 protein, ...    80  9e-16
TC11175 weakly similar to GB|AAL06796.1|15809736|AY054135 AT3g60...    29  3.0

>CB826783 
          Length = 596

 Score =  199 bits (505), Expect = 2e-51
 Identities = 96/137 (70%), Positives = 118/137 (86%)
 Frame = +3

Query: 25  EYLIGVGSYDMTGPAADVNMMGYANIEQNTAGIHFRLRARTFIVAENLQGPRFVFVNLDA 84
           +YL+G+GSYD+TGPAADVNMMGYAN+ Q T+GIHFRL AR FIVAE  +G R VFVNLDA
Sbjct: 189 DYLVGLGSYDITGPAADVNMMGYANMGQTTSGIHFRLLARAFIVAEK-KGNRVVFVNLDA 365

Query: 85  GMASQLLTIKLLERLKSRFGNLYTEENVAISGIHTHAGPGGYLQYVVYSVTSLGFVTQSF 144
            MA +++TIK++ERLK+R+G+LYTE+NVAISG HTHAGPGGYLQ +VY +TS GFV QSF
Sbjct: 366 CMAPEIVTIKVIERLKARYGDLYTEKNVAISGSHTHAGPGGYLQNIVYILTSFGFVRQSF 545

Query: 145 DAIANAVEQSIIQAHNN 161
           D I + +E+SI+QAH N
Sbjct: 546 DIIVDGIEKSIVQAHEN 596


>AV410449 
          Length = 373

 Score =  144 bits (364), Expect = 4e-35
 Identities = 75/125 (60%), Positives = 86/125 (68%)
 Frame = +1

Query: 510 HVVIAGLTNTYSQYIATFEEYHQQRYEAASTLYGPHTLSAYIQEFNKLAQAMAKGDKIYG 569
           HVV+AGLTNTYSQY+ T+EEY  QRYE ASTLYGPHTLSAYIQEF KLA A+  G  +  
Sbjct: 7   HVVLAGLTNTYSQYVTTYEEYEVQRYEGASTLYGPHTLSAYIQEFKKLANALISGQPV-E 183

Query: 570 NGTSPPDLLSVQKSFLLDPFGDTTPDGIKLGDIKEDIAFPGSGYFTKGDKPSATFWSANP 629
            G  PPDLL+ Q SFL     D TP G++ GD   D+  P +  F KGD  S TFWSA P
Sbjct: 184 PGPQPPDLLNKQISFLTPVVMDGTPIGVQFGDCSSDV--PKNATFKKGDMVSVTFWSACP 357

Query: 630 RYDLL 634
           R DL+
Sbjct: 358 RNDLM 372


>BG662411 
          Length = 503

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 37/51 (72%), Positives = 43/51 (83%)
 Frame = +2

Query: 122 GPGGYLQYVVYSVTSLGFVTQSFDAIANAVEQSIIQAHNNLKPGSIFINTG 172
           GPGG+LQYV Y VTSLGFV QSFD I + +E+SIIQAH NL+PGSIF+N G
Sbjct: 14  GPGGFLQYVTYLVTSLGFVRQSFDVIVDGIEKSIIQAHENLRPGSIFVNKG 166


>TC13951 weakly similar to UP|Q7XJQ9 (Q7XJQ9) At2g38010 protein, partial
           (14%)
          Length = 560

 Score = 80.5 bits (197), Expect = 9e-16
 Identities = 48/105 (45%), Positives = 59/105 (55%), Gaps = 2/105 (1%)
 Frame = +1

Query: 581 QKSFLLDPFGDTTPDGIKLGDIKEDIAFPGSGYFTKGDKPSATFWSANPRYDLLTEGTYA 640
           Q S L     D TP G   GD+  D+  P +  F  GD  +A+FWSA PR DL+TEGT+A
Sbjct: 1   QISLLPPVLVDGTPFGXSFGDVCSDV--PQNSSFKTGDTVTASFWSACPRNDLMTEGTFA 174

Query: 641 VVERLQ-GERWISVQDDDDLSLFFRWKVDN-TSFHGFAAIEWEIP 683
           +VE LQ  + WI   DDDD  L F+W   +  S    A IEW IP
Sbjct: 175 LVEFLQEKDTWIPAYDDDDFCLRFKWSRPHILSTTSKATIEWRIP 309


>TC11175 weakly similar to GB|AAL06796.1|15809736|AY054135
           AT3g60690/T4C21_100 {Arabidopsis thaliana;}, partial
           (42%)
          Length = 692

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 382 NKKVVKTCPAALGPGFAAGTTDGPGVFGFQQGDP 415
           NKK+   CP        +G++  PG+  F+ GDP
Sbjct: 405 NKKITSACPRQS*TSINSGSSCNPGLDPFKLGDP 304


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.317    0.136    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,531,876
Number of Sequences: 28460
Number of extensions: 151021
Number of successful extensions: 705
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of query: 720
length of database: 4,897,600
effective HSP length: 97
effective length of query: 623
effective length of database: 2,136,980
effective search space: 1331338540
effective search space used: 1331338540
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)