BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146743.13 + phase: 0
(492 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC16382 homologue to UP|Q9LNV5 (Q9LNV5) F22G5.30, partial (33%) 333 3e-92
AV426406 264 2e-71
TC17010 similar to UP|BAC84225 (BAC84225) RRM-containing RNA-bin... 192 1e-49
TC14208 similar to UP|Q9LEB4 (Q9LEB4) RNA binding protein 45, pa... 63 1e-10
TC14392 similar to UP|Q9LEB4 (Q9LEB4) RNA binding protein 45, pa... 59 2e-09
TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycop... 58 3e-09
BI420337 55 2e-08
BP043633 53 1e-07
TC8260 similar to UP|Q94ES8 (Q94ES8) Nodule extensin (Fragment),... 53 1e-07
TC10237 similar to UP|NO75_SOYBN (P08297) Early nodulin 75 precu... 51 4e-07
TC18149 weakly similar to UP|Q91BL3 (Q91BL3) Essential structura... 50 8e-07
CN825477 48 3e-06
AU251550 48 4e-06
TC11095 similar to PIR|T05112|T05112 splicing factor 9G8-like SR... 48 4e-06
AW164126 45 5e-06
TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomeras... 47 5e-06
AV409241 47 5e-06
TC14294 similar to UP|Q9FYE4 (Q9FYE4) EF-hand calcium binding pr... 47 7e-06
TC15072 45 3e-05
BP043392 45 3e-05
>TC16382 homologue to UP|Q9LNV5 (Q9LNV5) F22G5.30, partial (33%)
Length = 646
Score = 333 bits (855), Expect = 3e-92
Identities = 155/162 (95%), Positives = 160/162 (98%)
Frame = +3
Query: 1 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60
MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR
Sbjct: 159 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 338
Query: 61 DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAE 120
DARYKK+EICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSI SNDAIPKSDVNRE+FAE
Sbjct: 339 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREFFAE 518
Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHI 162
EHDR+ARAG+DYESS+GK RPNDTILKLQRTTPYYKRNRAHI
Sbjct: 519 EHDRRARAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHI 644
>AV426406
Length = 407
Score = 264 bits (675), Expect = 2e-71
Identities = 127/135 (94%), Positives = 133/135 (98%)
Frame = +2
Query: 158 NRAHICSFYTRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMS 217
+RAHICSFY RGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEM+
Sbjct: 2 DRAHICSFYIRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMA 181
Query: 218 SLEVPEDESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAE 277
+L+ PEDESIKTLYVGGLDARVTEQDLRDNFYAHGEIES+KMVLQRACAFVTYTTREGAE
Sbjct: 182 TLDAPEDESIKTLYVGGLDARVTEQDLRDNFYAHGEIESIKMVLQRACAFVTYTTREGAE 361
Query: 278 KAAEELSNKLVIKGL 292
KAAEEL+NKLVIKGL
Sbjct: 362 KAAEELANKLVIKGL 406
>TC17010 similar to UP|BAC84225 (BAC84225) RRM-containing RNA-binding
protein-like, partial (4%)
Length = 569
Score = 192 bits (487), Expect = 1e-49
Identities = 91/120 (75%), Positives = 94/120 (77%), Gaps = 1/120 (0%)
Frame = +1
Query: 374 QDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQYHH-QYYPPYQQYPPQYNAAMPP 432
QD PPGGPSGSGENKP EKQ MQHY RPMMPPP GQYHH QYYPPY Y Q P
Sbjct: 1 QDSPPGGPSGSGENKPGPEKQPMQHYPRPMMPPPPGQYHHHQYYPPYGGYMQQ------P 162
Query: 433 VPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGSSQTGSGQAGSAPAETGTSTSGSQEQ 492
VPPYQQYPP Y+A + P QPPAANHPYQH MQPGSSQTGS AG APAETGTS SGSQ+Q
Sbjct: 163 VPPYQQYPPPYHAVVAPSQPPAANHPYQHSMQPGSSQTGSAPAGPAPAETGTSASGSQQQ 342
>TC14208 similar to UP|Q9LEB4 (Q9LEB4) RNA binding protein 45, partial (41%)
Length = 837
Score = 63.2 bits (152), Expect = 1e-10
Identities = 47/140 (33%), Positives = 65/140 (45%), Gaps = 18/140 (12%)
Frame = +2
Query: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEEL 283
D S T++VG LD V + LR F +GE+ VK+ + C FV + R GAE+A L
Sbjct: 179 DPSNTTIFVGNLDPNVNDDHLRQVFSPYGELVHVKIPAGKRCGFVQFADRSGAEEALRVL 358
Query: 284 SNKLVIKGLRLKLMWGRPQS---AKPESD---------GLDQARQQASVAHSGLFPRA-- 329
N ++ G ++L WGR S A+P+S+ G Q + A SG P A
Sbjct: 359 -NGTLLGGQNVRLSWGRSPSNKQAQPDSNQYAAAGGYYGYGQGYENYGYAPSGQDPNAYG 535
Query: 330 ----VISQQQNQDQTQGMLY 345
+ Q Q Q Q M Y
Sbjct: 536 SYPGYANYQPQQQQPQQMGY 595
>TC14392 similar to UP|Q9LEB4 (Q9LEB4) RNA binding protein 45, partial (77%)
Length = 1576
Score = 58.5 bits (140), Expect = 2e-09
Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Frame = +3
Query: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEEL 283
D + T++VG LD VT+ LR F +G++ VK+ + C FV + R AE+A L
Sbjct: 930 DPNNTTIFVGNLDPNVTDDHLRQVFGLYGDLVHVKIPQGKRCGFVQFADRSCAEEALRVL 1109
Query: 284 SNKLVIKGLRLKLMWGRPQSAKPESDGLDQARQQASVA-----HSGLFPRAVISQQQNQD 338
N ++ G ++L WGR S K Q A A G Q+ +
Sbjct: 1110 -NGTLLGGQNVRLSWGRSPSNKQTQSDPSQWNNSAGGAGYYGYAQGYENYGYAPAGQDPN 1286
Query: 339 QTQGMLYYNNPPPPQQERNYYPSMDPQRMG 368
G Y N P QQ++ PQ+MG
Sbjct: 1287 MYAGYPGYANYQPAQQQQ-----QQPQQMG 1361
Score = 40.8 bits (94), Expect = 5e-04
Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Frame = +3
Query: 396 MQHYGRPMMPPPQ--GQYHHQYYPPYQQYPPQYNAAMPPV--PPYQQYPPQYNAAMPPPQ 451
M G P M PPQ Q + Q PY PPQ + PP P PPQ A PPQ
Sbjct: 120 MMQPGGPGMAPPQQPNQQYQQQQQPYMMMPPQQHQPQPPTMWAPSAAQPPQQQHA--PPQ 293
Query: 452 PPAANHPYQHPMQPGSSQT 470
H + P P +T
Sbjct: 294 ----QHQHAQPSTPDEVRT 338
>TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycoprotein
(HRGP) (Fragment), partial (57%)
Length = 941
Score = 58.2 bits (139), Expect = 3e-09
Identities = 43/130 (33%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Frame = +1
Query: 345 YYNNPPPPQQERN--YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
YY +PPPP YY P P PP PS +Y P
Sbjct: 133 YYQSPPPPSHSPPPPYYYKSPP-------PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSP 291
Query: 403 MMPPPQGQYHHQYY-----PPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPP--QPPAA 455
PPP H YY PP PP Y+ PP PP PP Y+ A PPP PA
Sbjct: 292 --PPPSPIPHPPYYYKSPPPPTSSPPPPYHYVSPP-PPSPSPPPPYHYASPPPPSPSPAP 462
Query: 456 NHPYQHPMQP 465
+ Y+ P P
Sbjct: 463 TYIYKSPPPP 492
Score = 55.8 bits (133), Expect = 2e-08
Identities = 42/131 (32%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Frame = +1
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGR 401
YY +PPPP YY S P PS PP P P S +Y +
Sbjct: 85 YYKSPPPPSPSPPPPYYYQSPPP-------PSHSPPP--PYYYKSPPPPSPSPPPPYYYK 237
Query: 402 ---PMMPPPQGQYHHQYYPPYQQYP-PQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANH 457
P P P Y+++ PP P P Y PP PP PP Y+ PPP P+
Sbjct: 238 SPPPPSPSPPPPYYYKSPPPPSPIPHPPYYYKSPP-PPTSSPPPPYHYVSPPPPSPSPPP 414
Query: 458 PYQHPMQPGSS 468
PY + P S
Sbjct: 415 PYHYASPPPPS 447
Score = 51.6 bits (122), Expect = 3e-07
Identities = 44/140 (31%), Positives = 51/140 (36%), Gaps = 16/140 (11%)
Frame = +1
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSG--------SGENKPSSEK 393
YY +PPPP YY S P P P PS P+S
Sbjct: 181 YYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPIPHPPYYYKSPPPPTSSP 360
Query: 394 QQMQHYGRPMMPPPQGQ--YHHQYYPPYQQYP-PQYNAAMPPVPPYQQYPPQYNAAMPPP 450
HY P P P YH+ PP P P Y PP PP + PP Y+ PPP
Sbjct: 361 PPPYHYVSPPPPSPSPPPPYHYASPPPPSPSPAPTYIYKSPP-PPVKLPPPPYHYTSPPP 537
Query: 451 --QPPAANHPYQHPMQPGSS 468
PA + Y+ P P S
Sbjct: 538 PSPSPAPTYIYKSPPPPTKS 597
Score = 48.1 bits (113), Expect = 3e-06
Identities = 36/120 (30%), Positives = 40/120 (33%)
Frame = +1
Query: 349 PPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQ 408
PPPP + YY S P P PP PS PP
Sbjct: 28 PPPPVPKPYYYKSPPPPPYYYKSP----PPPSPS-----------------------PPP 126
Query: 409 GQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGSS 468
Y+ PP PP Y PP PP PP Y PPP P+ PY + P S
Sbjct: 127 PYYYQSPPPPSHSPPPPYYYKSPP-PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPS 303
Score = 44.7 bits (104), Expect = 4e-05
Identities = 37/128 (28%), Positives = 45/128 (34%), Gaps = 7/128 (5%)
Frame = +1
Query: 345 YYNNPPPPQQERN--YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
YY +PPPP + YY P P PP PS HY P
Sbjct: 277 YYKSPPPPSPIPHPPYYYKSPP-------PPTSSPPPPYHYVSPPPPSPSPPPPYHYASP 435
Query: 403 MMPPPQGQYHHQYY---PPYQQYPPQYNAAMPPVPPYQQYPPQ-YNAAMPPPQ-PPAANH 457
P P + Y PP + PP Y+ PP P P Y + PP + PP +
Sbjct: 436 PPPSPSPAPTYIYKSPPPPVKLPPPPYHYTSPPPPSPSPAPTYIYKSPPPPTKSPPPPVY 615
Query: 458 PYQHPMQP 465
Y P P
Sbjct: 616 IYASPPPP 639
Score = 38.9 bits (89), Expect = 0.002
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 399 YGRPMMPPPQGQ-YHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANH 457
Y P PPP + Y+++ PP PP Y + PP P P Y + PP P +
Sbjct: 13 YKSPPPPPPVPKPYYYKSPPP----PPYYYKSPPPPSPSPPPPYYYQSPPPPSHSPPPPY 180
Query: 458 PYQHPMQPGSS 468
Y+ P P S
Sbjct: 181 YYKSPPPPSPS 213
Score = 35.0 bits (79), Expect = 0.028
Identities = 21/59 (35%), Positives = 25/59 (41%), Gaps = 1/59 (1%)
Frame = +1
Query: 411 YHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQP-PAANHPYQHPMQPGSS 468
Y ++ PP P Y PP PPY Y + PPP P P + YQ P P S
Sbjct: 7 YWYKSPPPPPPVPKPYYYKSPPPPPY------YYKSPPPPSPSPPPPYYYQSPPPPSHS 165
Score = 31.6 bits (70), Expect = 0.31
Identities = 31/108 (28%), Positives = 39/108 (35%), Gaps = 15/108 (13%)
Frame = +1
Query: 345 YYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSGSG------ENKPSSEKQQ 395
YY +PPPP +Y S P P P PS S ++ P K
Sbjct: 325 YYKSPPPPTSSPPPPYHYVSPPPPSPSPPPPYHYASPPPPSPSPAPTYIYKSPPPPVKLP 504
Query: 396 MQHYGRPMMPPPQGQ----YHHQYYPPYQQYPPQ--YNAAMPPVPPYQ 437
Y PPP Y ++ PP + PP Y A PP P Y+
Sbjct: 505 PPPYHYTSPPPPSPSPAPTYIYKSPPPPTKSPPPPVYIYASPPPPIYK 648
>BI420337
Length = 397
Score = 55.5 bits (132), Expect = 2e-08
Identities = 27/76 (35%), Positives = 36/76 (46%), Gaps = 15/76 (19%)
Frame = +1
Query: 405 PPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQY------PPQYNAAMPPPQ------- 451
PPP+ Y+H PP PP Y+ + PP PP + Y PP Y PPP+
Sbjct: 109 PPPKPYYYHSPPPPMHSPPPPYHYSSPPPPPKKPYKYPSPPPPVYKYKSPPPRTPAYYYK 288
Query: 452 --PPAANHPYQHPMQP 465
PP +PY++P P
Sbjct: 289 SPPPPPKNPYKYPSPP 336
Score = 40.8 bits (94), Expect = 5e-04
Identities = 32/107 (29%), Positives = 43/107 (39%)
Frame = +1
Query: 346 YNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMP 405
Y +PPPP+ YY S P P P P PS + Y P P
Sbjct: 97 YTSPPPPKPY--YYHSPPPPMHSPPPPYHYSSPPPPPKKPYKYPSPPPP-VYKYKSP--P 261
Query: 406 PPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQP 452
P Y+++ PP + P +Y + PPV Y+ PP + PP P
Sbjct: 262 PRTPAYYYKSPPPPPKNPYKYPSPPPPVYKYKSPPPPFK--YPPHLP 396
Score = 38.9 bits (89), Expect = 0.002
Identities = 28/97 (28%), Positives = 42/97 (42%)
Frame = +1
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMM 404
+Y++PPPP ++ YPS P + + PP P+ +Y +
Sbjct: 175 HYSSPPPPPKKPYKYPSPPP----PVYKYKSPPPRTPA---------------YYYKSPP 297
Query: 405 PPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPP 441
PPP+ Y + P PP Y PP PP+ +YPP
Sbjct: 298 PPPKNPYKYPSPP-----PPVYKYKSPP-PPF-KYPP 387
>BP043633
Length = 542
Score = 53.1 bits (126), Expect = 1e-07
Identities = 36/112 (32%), Positives = 43/112 (38%), Gaps = 14/112 (12%)
Frame = +1
Query: 365 QRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPP----------QGQYHHQ 414
Q G + P Q PP P H+ P +PPP Q QYHH
Sbjct: 220 QPHGYMRPPQPPPP----------PPPPPDPNHHHHFPQIPPPHPPQAPWYSPQFQYHHP 369
Query: 415 YYPPYQQYPPQYNAAMPPVPP----YQQYPPQYNAAMPPPQPPAANHPYQHP 462
P PPQ+ PP PP Y +P Q+ PPP+PP HP P
Sbjct: 370 SQTPSP--PPQWGPPPPPPPPPSNPYSYHPKQFPPPPPPPRPPHPPHPQFPP 519
Score = 42.0 bits (97), Expect = 2e-04
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Frame = +1
Query: 349 PPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGE---NKPSSEKQQMQHYGRPMMP 405
PPP +++P + P PP P S + + PS +G P P
Sbjct: 268 PPPDPNHHHHFPQIPPPH----------PPQAPWYSPQFQYHHPSQTPSPPPQWGPPPPP 417
Query: 406 PPQGQ----YHHQYYPPYQQYPPQYNAAMPPVPPYQQYPP 441
PP YH + +PP PP PP PP+ Q+PP
Sbjct: 418 PPPPSNPYSYHPKQFPP----PPP--PPRPPHPPHPQFPP 519
Score = 29.6 bits (65), Expect = 1.2
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 12/59 (20%)
Frame = +1
Query: 419 YQQYPPQYNAAMPPVPPYQQYPPQYN---AAMPPPQPPAA---------NHPYQHPMQP 465
YQQ PP PP P ++ +PPP PP A +HP Q P P
Sbjct: 214 YQQPHGYMRPPQPPPPPPPPPDPNHHHHFPQIPPPHPPQAPWYSPQFQYHHPSQTPSPP 390
Score = 27.7 bits (60), Expect = 4.4
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +1
Query: 432 PVPPYQQ-----YPPQYNAAMPPPQPPAANHPYQHPMQP 465
P+ YQQ PPQ PPP PP NH + P P
Sbjct: 202 PMDSYQQPHGYMRPPQPPP--PPPPPPDPNHHHHFPQIP 312
>TC8260 similar to UP|Q94ES8 (Q94ES8) Nodule extensin (Fragment), partial
(79%)
Length = 1017
Score = 53.1 bits (126), Expect = 1e-07
Identities = 41/129 (31%), Positives = 53/129 (40%), Gaps = 9/129 (6%)
Frame = +3
Query: 344 LYYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPM 403
+Y++ PPPP + YPS P P P P + P ++ Y P
Sbjct: 252 VYHSPPPPPPHKPYKYPSPPP-------PPHKYPHPHPHPVYHSPPPPPPKKHYKYSSP- 407
Query: 404 MPPPQGQYHHQYY------PPYQQYP---PQYNAAMPPVPPYQQYPPQYNAAMPPPQPPA 454
PPP Y H + PP YP P Y++ PP PP + P Y A PPP P
Sbjct: 408 -PPPVHTYPHPHPVYHSPPPPVHTYPHPHPVYHS--PPPPPPHEKP--YKYASPPPPPV- 569
Query: 455 ANHPYQHPM 463
H Y HP+
Sbjct: 570 --HTYPHPV 590
Score = 52.0 bits (123), Expect = 2e-07
Identities = 34/126 (26%), Positives = 48/126 (37%), Gaps = 6/126 (4%)
Frame = +3
Query: 346 YNNPPPPQQERN---YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRP 402
Y++PPPP ++ + + P P PS PP P + H
Sbjct: 213 YHSPPPPYEKPHPVYHSPPPPPPHKPYKYPSPPPPP-------HKYPHPHPHPVYH---- 359
Query: 403 MMPPPQGQYHHQYY---PPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPY 459
PPP + H++Y PP YP + P PP YP + PP PP PY
Sbjct: 360 SPPPPPPKKHYKYSSPPPPVHTYPHPHPVYHSPPPPVHTYPHPHPVYHSPPPPPPHEKPY 539
Query: 460 QHPMQP 465
++ P
Sbjct: 540 KYASPP 557
Score = 50.1 bits (118), Expect = 8e-07
Identities = 28/78 (35%), Positives = 33/78 (41%), Gaps = 13/78 (16%)
Frame = +3
Query: 398 HYGRPMMPPPQGQY-HHQYYPPYQQYPPQYNAAMP----PVPPYQQYPPQYNAAMPP--- 449
HY PPP Y +H PP PP Y P P PPY++ P Y++ PP
Sbjct: 105 HYAYSSPPPPPKPYSYHSPPPPVHSPPPPYEKPHPVYHSPPPPYEKPHPVYHSPPPPPPH 284
Query: 450 -----PQPPAANHPYQHP 462
P PP H Y HP
Sbjct: 285 KPYKYPSPPPPPHKYPHP 338
Score = 45.1 bits (105), Expect = 3e-05
Identities = 36/126 (28%), Positives = 52/126 (40%), Gaps = 6/126 (4%)
Frame = +3
Query: 346 YNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMP 405
Y++PPPP + +Y+ P PP P EK ++ P
Sbjct: 114 YSSPPPPPKPYSYHSPPPPVH---------SPP----------PPYEKPHPVYHSPP--- 227
Query: 406 PPQGQYHHQYYPPYQQYPPQ-YNAAMPPVPPYQQYP-----PQYNAAMPPPQPPAANHPY 459
PP + H Y+ P P + Y PP PP++ YP P Y++ PPP PP ++ Y
Sbjct: 228 PPYEKPHPVYHSPPPPPPHKPYKYPSPPPPPHK-YPHPHPHPVYHS--PPPPPPKKHYKY 398
Query: 460 QHPMQP 465
P P
Sbjct: 399 SSPPPP 416
Score = 39.7 bits (91), Expect = 0.001
Identities = 29/110 (26%), Positives = 42/110 (37%), Gaps = 11/110 (10%)
Frame = +3
Query: 346 YNNPPPPQQERNY-----------YPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQ 394
Y++PPPP +++Y YP P P P P P ++
Sbjct: 354 YHSPPPPPPKKHYKYSSPPPPVHTYPHPHPVYHSPPPPVHTYPHPHPVYHSPPPPPPHEK 533
Query: 395 QMQHYGRPMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYN 444
++ P PPP Y H P Y PP ++ PP Y+ PP Y+
Sbjct: 534 PYKYASPP--PPPVHTYPH---PVYHSPPPPVHSPPPPHYYYKSPPPPYH 668
>TC10237 similar to UP|NO75_SOYBN (P08297) Early nodulin 75 precursor (N-75)
(NGM-75), partial (49%)
Length = 803
Score = 51.2 bits (121), Expect = 4e-07
Identities = 34/113 (30%), Positives = 48/113 (42%)
Frame = +1
Query: 350 PPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQG 409
PP Q + P + + P + PP E +P +K Q+ P PPQ
Sbjct: 7 PPKYQPPHEKPPFEKPPLEK--PPHEKPPP------EYQPPHKKPPSQYQPPPEYEPPQE 162
Query: 410 QYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHP 462
+ Y PPY + PP Y PPY++ PP+Y P PP + PY+ P
Sbjct: 163 KPPPVYLPPYWKPPPAY------PPPYEKPPPEYEPPQEKP-PPVYSPPYERP 300
Score = 48.1 bits (113), Expect = 3e-06
Identities = 36/116 (31%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Frame = +1
Query: 350 PPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQH---YGRPMMPP 406
PPP+ Y P + L P PP P + P E Q + Y P P
Sbjct: 133 PPPE----YEPPQEKPPPVYLPPYWKPPPAYPPPYEKPPPEYEPPQEKPPPVYSPPYERP 300
Query: 407 PQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHP 462
P G H YPP+ PP Y+ PPY++ PP Y P +PP P++ P
Sbjct: 301 PTG--HPTPYPPFYHLPPVYH------PPYEKPPPLYQP--PHEKPPIYEPPHEKP 438
Score = 47.0 bits (110), Expect = 7e-06
Identities = 38/124 (30%), Positives = 50/124 (39%), Gaps = 7/124 (5%)
Frame = +1
Query: 346 YNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMP 405
+ PPP Q + P PSQ PP E +P EK + P
Sbjct: 73 HEKPPPEYQPPHKKP-----------PSQYQPPP------EYEPPQEKPPPVYLPPYWKP 201
Query: 406 PPQGQYHHQYYPPYQQYPPQYNAAM---PPV--PPYQQYPPQYNAAMPP--PQPPAANHP 458
PP Y PPY++ PP+Y PPV PPY++ P + PP PP + P
Sbjct: 202 PPA------YPPPYEKPPPEYEPPQEKPPPVYSPPYERPPTGHPTPYPPFYHLPPVYHPP 363
Query: 459 YQHP 462
Y+ P
Sbjct: 364 YEKP 375
Score = 30.0 bits (66), Expect = 0.90
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +1
Query: 414 QYYPPYQQYPPQYNAAMPPV--PPYQQYPPQYNAAMPPP----QPPAANHPYQHPMQP 465
+Y PP+++ P + PP+ PP+++ PP+Y P QPP P Q P
Sbjct: 13 KYQPPHEKPPFE----KPPLEKPPHEKPPPEYQPPHKKPPSQYQPPPEYEPPQEKPPP 174
>TC18149 weakly similar to UP|Q91BL3 (Q91BL3) Essential structural protein
pp78/81, partial (5%)
Length = 710
Score = 50.1 bits (118), Expect = 8e-07
Identities = 56/180 (31%), Positives = 69/180 (38%), Gaps = 45/180 (25%)
Frame = +3
Query: 347 NNPP--PPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQM--QHYGRP 402
N PP PPQQ PS P SQ P P P + Q+ Q Y +P
Sbjct: 126 NAPPQLPPQQ--GLPPSFPPPNQF----SQTQIPAVPQRDPYFPPPVQSQETPNQQYQQP 287
Query: 403 MMP--------PPQGQYHHQYYPPYQQ-YPPQYNAAMPPV---------------PPY-- 436
+ P PP QY +P Y Q PPQ+ +P + PPY
Sbjct: 288 LAPQPHPQPGAPPHQQYQQTPHPQYSQPAPPQHQPPIPSINPPQLQSSLGHHVEEPPYVP 467
Query: 437 -QQYPPQYNAAMPPPQPPAANH--PYQ-------HPMQPGSSQTGSGQ-----AGSAPAE 481
Q YPP N PP QPP+ P Q H +P S++GSG + S PAE
Sbjct: 468 SQTYPP--NLRQPPSQPPSGPPAPPSQQFYGTAPHAYEPPPSRSGSGYSSGYGSSSGPAE 641
>CN825477
Length = 466
Score = 48.1 bits (113), Expect = 3e-06
Identities = 37/100 (37%), Positives = 41/100 (41%)
Frame = +1
Query: 374 QDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPV 433
Q P G P G P + YG+ PPP YPP Q YPP A PP
Sbjct: 31 QQPPVGVPPPQGYPAPDT-------YGKDAYPPPG-------YPPQQGYPP---AGYPP- 156
Query: 434 PPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGSSQTGSG 473
Q YPPQY A PPPQ Y P P + +G G
Sbjct: 157 ---QGYPPQY--APPPPQ-------YSQPPPPQKNSSGPG 240
>AU251550
Length = 329
Score = 47.8 bits (112), Expect = 4e-06
Identities = 33/99 (33%), Positives = 36/99 (36%), Gaps = 4/99 (4%)
Frame = +2
Query: 372 PSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMP-PPQGQYHHQYYPP---YQQYPPQYN 427
P GPPG P N P Q Y P P PP+ Y PP + PP +
Sbjct: 44 PGPPGPPGPPPPGYHNPPPPGPPQPPGYYNPPPPGPPRDPYAPAPPPPPFGHHHPPPPHG 223
Query: 428 AAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPG 466
PP P PP PPQPP HP PG
Sbjct: 224 PPSPPPPAMFYQPPPPPGPPGPPQPP-------HPPGPG 319
Score = 44.7 bits (104), Expect = 4e-05
Identities = 37/115 (32%), Positives = 39/115 (33%), Gaps = 2/115 (1%)
Frame = +2
Query: 346 YNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMP 405
Y+NPPPP PQ G P GPP P Y P
Sbjct: 83 YHNPPPPGP---------PQPPGYYNPPPPGPPRDP-----------------YAPAPPP 184
Query: 406 PPQGQYHHQYYPPY--QQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHP 458
PP G HH PP+ PP PP PP PPQ PP PP P
Sbjct: 185 PPFG--HHHPPPPHGPPSPPPPAMFYQPPPPPGPPGPPQ------PPHPPGPGPP 325
Score = 43.5 bits (101), Expect = 8e-05
Identities = 31/94 (32%), Positives = 33/94 (34%)
Frame = +2
Query: 372 PSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQYHHQYYPPYQQYPPQYNAAMP 431
P Q GPPG P PPP G +H PP PP Y P
Sbjct: 35 PPQPGPPGPPG----------------------PPPPG--YHNPPPPGPPQPPGYYNPPP 142
Query: 432 PVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQP 465
P PP Y P PP PP +H HP P
Sbjct: 143 PGPPRDPYAPA------PPPPPFGHH---HPPPP 217
Score = 37.4 bits (85), Expect = 0.006
Identities = 31/97 (31%), Positives = 34/97 (34%)
Frame = +2
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMM 404
YYN PPP Y P+ P G P PP GP PS
Sbjct: 125 YYNPPPPGPPRDPYAPAPPPPPFGHHHPP---PPHGP-------PS-------------- 232
Query: 405 PPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPP 441
PPP ++ PP PPQ PP PP PP
Sbjct: 233 PPPPAMFYQPPPPPGPPGPPQ-----PPHPPGPGPPP 328
Score = 34.7 bits (78), Expect = 0.036
Identities = 22/54 (40%), Positives = 27/54 (49%), Gaps = 3/54 (5%)
Frame = +2
Query: 416 YP-PYQQYPPQYNAAMPPVPPYQQYPPQYNAAMP--PPQPPAANHPYQHPMQPG 466
YP ++ +PPQ PP PP PP Y+ P PPQPP Y +P PG
Sbjct: 11 YPHDHRHWPPQPGPPGPPGPP----PPGYHNPPPPGPPQPPG----YYNPPPPG 148
>TC11095 similar to PIR|T05112|T05112 splicing factor 9G8-like SR protein
RSZp22 [validated] - Arabidopsis thaliana
{Arabidopsis thaliana;}, partial (89%)
Length = 912
Score = 47.8 bits (112), Expect = 4e-06
Identities = 32/90 (35%), Positives = 49/90 (53%), Gaps = 1/90 (1%)
Frame = +1
Query: 208 KLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQ-RACA 266
+LLG ++S + E++ +YVG LD+RV+E+DL D F G I SV + + A
Sbjct: 28 RLLGFLSHIASGFF*KAETMSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYA 207
Query: 267 FVTYTTREGAEKAAEELSNKLVIKGLRLKL 296
F+ + R A+ A EL K G R++L
Sbjct: 208 FIDFDDRRDAQDAIRELDGK---NGWRVEL 288
>AW164126
Length = 387
Score = 44.7 bits (104), Expect(2) = 5e-06
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +2
Query: 402 PMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQP-PAANHPYQ 460
P P P+ Y+ PP PP Y PP P +PP Y + PPP P P + Y
Sbjct: 149 PPSPSPKPYYYKSPPPPSPSPPPPYYYKSPPPPSPVPHPPYYYKSPPPPSPIPHPPYYYS 328
Query: 461 HPMQPGSS 468
P P S
Sbjct: 329 SPPPPVKS 352
Score = 41.2 bits (95), Expect = 4e-04
Identities = 33/120 (27%), Positives = 39/120 (32%), Gaps = 2/120 (1%)
Frame = +2
Query: 345 YYNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMM 404
YY +PPPP Y P PP PS
Sbjct: 131 YYKSPPPPSPSPKPYYYKSP------------PPPSPS---------------------- 208
Query: 405 PPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPP--QPPAANHPYQHP 462
PPP Y P +PP Y + PP P +PP Y ++ PPP PP Y P
Sbjct: 209 PPPPYYYKSPPPPSPVPHPPYYYKSPPPPSPI-PHPPYYYSSPPPPVKSPPPPTPYYYSP 385
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/88 (30%), Positives = 36/88 (40%)
Frame = +2
Query: 381 PSGSGENKPSSEKQQMQHYGRPMMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYP 440
PS S + PS+ Q+ + P Y+++ PP P Y PP PP P
Sbjct: 50 PSSSISSTPSTLLLQVPTPTFTISKP----YYYKSPPPPSPSPKPYYYKSPP-PPSPSPP 214
Query: 441 PQYNAAMPPPQPPAANHPYQHPMQPGSS 468
P Y PPP P + PY + P S
Sbjct: 215 PPYYYKSPPPPSPVPHPPYYYKSPPPPS 298
Score = 36.6 bits (83), Expect = 0.010
Identities = 18/44 (40%), Positives = 22/44 (49%), Gaps = 4/44 (9%)
Frame = +3
Query: 423 PPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANH----PYQHP 462
PP Y PP P +PP Y + PPP P+ NH P+ HP
Sbjct: 27 PPPYYYKSPPPPSPVPHPPYYYKS-PPPPSPSLNHTTTSPHHHP 155
Score = 26.9 bits (58), Expect = 7.6
Identities = 11/29 (37%), Positives = 13/29 (43%)
Frame = +3
Query: 440 PPQYNAAMPPPQPPAANHPYQHPMQPGSS 468
PP Y PPP P + PY + P S
Sbjct: 27 PPPYYYKSPPPPSPVPHPPYYYKSPPPPS 113
Score = 22.3 bits (46), Expect(2) = 5e-06
Identities = 10/23 (43%), Positives = 12/23 (51%), Gaps = 3/23 (13%)
Frame = +3
Query: 345 YYNNPPPPQQERN---YYPSMDP 364
YY +PPPP + YY S P
Sbjct: 39 YYKSPPPPSPVPHPPYYYKSPPP 107
>TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomerase
precursor , partial (81%)
Length = 1355
Score = 47.4 bits (111), Expect = 5e-06
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +2
Query: 407 PQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPG 466
P +HH PP+ PP + PP+P PP N ++P P P + P +P
Sbjct: 263 PYPSHHHHLSPPHTTMPPPTLSYAPPLPLNYAPPPLPNPSVPSPSPKTTSRD-SPPTRPS 439
Query: 467 SSQTGSGQAGSAPAETGTSTSGS 489
++ + + + SAPA S+S S
Sbjct: 440 TTSSPAWSSASAPAPPPPSSSPS 508
>AV409241
Length = 282
Score = 47.4 bits (111), Expect = 5e-06
Identities = 29/88 (32%), Positives = 40/88 (44%), Gaps = 4/88 (4%)
Frame = +2
Query: 402 PMMPPPQGQYHHQYYPPY-QQYPPQYNAAMPPVPPYQQYPPQYNAAMPP--PQPPAANHP 458
P +PP ++H Q++ P+ Q PP ++ P PP PP PP P PPAA P
Sbjct: 11 PQVPPQPHEHHQQHHQPHVQVQPPSHSPTKTPPPPTPPPPPPPATVSPPPTPSPPAAATP 190
Query: 459 YQHPMQPGSS-QTGSGQAGSAPAETGTS 485
+P T + SAP T +S
Sbjct: 191 SPLSAKPSRKIPTSTTSPRSAPPPTTSS 274
>TC14294 similar to UP|Q9FYE4 (Q9FYE4) EF-hand calcium binding protein-like
(At5g04170), partial (65%)
Length = 1192
Score = 47.0 bits (110), Expect = 7e-06
Identities = 35/98 (35%), Positives = 37/98 (37%), Gaps = 5/98 (5%)
Frame = +1
Query: 373 SQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQYHHQYYPPYQQY----PPQYNA 428
+ G P PSG G P Q YG P G PP Q Y PPQ
Sbjct: 58 NMSGYPNKPSGYGYGAPPP----YQPYGAAPPSQPYGAA-----PPSQSYGAPPPPQPYG 210
Query: 429 AMPPVPPYQQYPP-QYNAAMPPPQPPAANHPYQHPMQP 465
A PP PY PP Q PPP P + PY P P
Sbjct: 211 AAPPSQPYGAPPPSQSYGGPPPPSQPYSASPYGQPSAP 324
Score = 38.9 bits (89), Expect = 0.002
Identities = 44/137 (32%), Positives = 47/137 (34%), Gaps = 3/137 (2%)
Frame = +1
Query: 346 YNNPPPPQQERNYYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMP 405
Y PPP Y P GA PSQ PS Q YG P P
Sbjct: 97 YGAPPP------YQP------YGAAPPSQPYGAAPPS--------------QSYGAPPPP 198
Query: 406 PPQGQYHHQYYPPYQQY--PPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAA-NHPYQHP 462
P G PP Q Y PP + P PP Q Y +A P QP A PYQ P
Sbjct: 199 QPYGA-----APPSQPYGAPPPSQSYGGPPPPSQPY-----SASPYGQPSAPYAAPYQKP 348
Query: 463 MQPGSSQTGSGQAGSAP 479
+ S G G P
Sbjct: 349 PKDESHSHGGGGGSGYP 399
>TC15072
Length = 721
Score = 45.1 bits (105), Expect = 3e-05
Identities = 30/83 (36%), Positives = 33/83 (39%), Gaps = 16/83 (19%)
Frame = +1
Query: 403 MMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPP----------YQQYPPQYNAAMPPP-- 450
M PPPQ Y PP YPP YNA PP PP + P N +PPP
Sbjct: 4 MPPPPQPTY-----PPSYGYPPYYNAVPPPPPPAPVTSEQSPSFGNVPWASNPMVPPPPS 168
Query: 451 ----QPPAANHPYQHPMQPGSSQ 469
QP A N P G S+
Sbjct: 169 DNQSQPRATNPPLPPASSAGDSE 237
Score = 29.3 bits (64), Expect = 1.5
Identities = 31/88 (35%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +1
Query: 349 PPPPQQERNYYPSMD-PQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPP 407
PPPPQ Y PS P A+ P PP P S E PS + PM+PPP
Sbjct: 7 PPPPQP--TYPPSYGYPPYYNAVPPP---PPPAPVTS-EQSPSFGN--VPWASNPMVPPP 162
Query: 408 QGQYHHQYYPPYQQYPPQYNAAMPPVPP 435
P Q P+ A PP+PP
Sbjct: 163 ---------PSDNQSQPR--ATNPPLPP 213
>BP043392
Length = 442
Score = 45.1 bits (105), Expect = 3e-05
Identities = 30/83 (36%), Positives = 33/83 (39%), Gaps = 16/83 (19%)
Frame = -2
Query: 403 MMPPPQGQYHHQYYPPYQQYPPQYNAAMPPVPP----------YQQYPPQYNAAMPPP-- 450
M PPPQ Y PP YPP YNA PP PP + P N +PPP
Sbjct: 441 MPPPPQPTY-----PPSYGYPPYYNAVPPPPPPAPVTSEQSPSFGNVPWASNPMVPPPPS 277
Query: 451 ----QPPAANHPYQHPMQPGSSQ 469
QP A N P G S+
Sbjct: 276 DNQSQPRATNPPLPPASSAGDSE 208
Score = 29.3 bits (64), Expect = 1.5
Identities = 31/88 (35%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -2
Query: 349 PPPPQQERNYYPSMD-PQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPP 407
PPPPQ Y PS P A+ P PP P S E PS + PM+PPP
Sbjct: 438 PPPPQP--TYPPSYGYPPYYNAVPPP---PPPAPVTS-EQSPSFGN--VPWASNPMVPPP 283
Query: 408 QGQYHHQYYPPYQQYPPQYNAAMPPVPP 435
P Q P+ A PP+PP
Sbjct: 282 ---------PSDNQSQPR--ATNPPLPP 232
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.314 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,932,769
Number of Sequences: 28460
Number of extensions: 204811
Number of successful extensions: 3761
Number of sequences better than 10.0: 499
Number of HSP's better than 10.0 without gapping: 1966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2763
length of query: 492
length of database: 4,897,600
effective HSP length: 94
effective length of query: 398
effective length of database: 2,222,360
effective search space: 884499280
effective search space used: 884499280
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Medicago: description of AC146743.13