TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146708.3 - phase: 0 
         (282 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW719689                                                              139  7e-34
BP042082                                                              132  9e-32
BP044614                                                               28  2.3
TC12990                                                                27  5.1
BP064150                                                               27  5.1
TC17435 similar to UP|Q42792 (Q42792) Asparagine synthetase  , p...    26  6.7
TC10215 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor respon...    26  8.7

>AW719689 
          Length = 576

 Score =  139 bits (349), Expect = 7e-34
 Identities = 76/181 (41%), Positives = 119/181 (64%), Gaps = 5/181 (2%)
 Frame = +1

Query: 3   TLALAFQSLGVVYGDIGTSPLYVLASTFPKGIDHTDDILGVLSLIYYTILALPLLKYVFI 62
           TL LA+++LGVV+G + TSPLYV  S  P      +D LG+ S+I++T+  + ++KY  I
Sbjct: 31  TLILAYRTLGVVFGGLVTSPLYVYPS-MPLHSPTEEDYLGIYSIIFWTLTLIGVVKYANI 207

Query: 63  VLKANDNGNGGTFALYSLLCRHANVSLIPN-QQPEDMELS-NYKLETPSSNQQLKKKLEN 120
            +KA+D+G GGTFA+YSLLCRH N+ ++P+ QQ +  +L  N       ++  L K  E 
Sbjct: 208 AIKADDHGEGGTFAVYSLLCRHFNIGILPSKQQQQQQQLGLNSMTRGTETHTWLAKLFER 387

Query: 121 SHFARVLLLFMTILGTTMVIGDGVFTPPMSVISAVNGISS---KLGQDYVVSITIAILVI 177
           S  AR +LLF+ +LGT M+IGDG+ TP +SV+SA++G+ +   K+ +  V +++   L+ 
Sbjct: 388 SVVARRVLLFVAMLGTCMLIGDGILTPAISVLSAMDGVRAPFPKVSKSLVEALSAGXLIF 567

Query: 178 L 178
           L
Sbjct: 568 L 570


>BP042082 
          Length = 521

 Score =  132 bits (331), Expect = 9e-32
 Identities = 71/134 (52%), Positives = 91/134 (66%), Gaps = 7/134 (5%)
 Frame = +3

Query: 4   LALAFQSLGVVYGDIGTSPLYVLASTFPKGI---DHTDDILGVLSLIYYTILALPLLKYV 60
           L LA+QSLGVVYGD+ TSPLYV  +TF   +   +  ++I GVLS I++T   + L KYV
Sbjct: 120 LTLAYQSLGVVYGDLSTSPLYVYKTTFSGKLRLKEDDEEIFGVLSFIFWTFTIIALFKYV 299

Query: 61  FIVLKANDNGNGGTFALYSLLCRHANVSLIPNQQPEDMELSNYKLETPSSNQQ---LKKK 117
           FIV+ A+DNG GGTFALYSLLCRHA +S++PNQQP D +LS+Y  E      Q   LK  
Sbjct: 300 FIVMSADDNGEGGTFALYSLLCRHARLSILPNQQPTDAQLSSYATENSEDTWQSSFLKMF 479

Query: 118 LE-NSHFARVLLLF 130
            E +  F + LL+F
Sbjct: 480 FEKHPRFQKGLLIF 521


>BP044614 
          Length = 527

 Score = 27.7 bits (60), Expect = 2.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 193 FAPILTIWFILIGATGIYNVFKYDVRVL 220
           F  +L IW +L+G  G+Y + +   RV+
Sbjct: 469 FGRVLEIWVLLLGIVGVYLIIRMVYRVV 386


>TC12990 
          Length = 518

 Score = 26.6 bits (57), Expect = 5.1
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 186 TSKVGFSFAPILTIWFILIGATGIYNVFKYDVRVLLAINPKYIVDY 231
           T K  F       IW++L+    +Y+   Y ++V + I+    VDY
Sbjct: 296 TLKAWFHLFKSKEIWYVLVITIRLYS*IMYHIQVFVGIDKYC*VDY 433


>BP064150 
          Length = 422

 Score = 26.6 bits (57), Expect = 5.1
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -1

Query: 7   AFQSLGVV-YGDIGTSPLYVLASTF 30
           +F S  VV YG +  SPLYVL S F
Sbjct: 155 SFMSFNVV*YGPVKISPLYVLPSEF 81


>TC17435 similar to UP|Q42792 (Q42792) Asparagine synthetase  , partial (9%)
          Length = 631

 Score = 26.2 bits (56), Expect = 6.7
 Identities = 19/64 (29%), Positives = 31/64 (47%), Gaps = 8/64 (12%)
 Frame = +2

Query: 196 ILTIWFILIGATGI----YNVFKYDVRVLLAINPKYIVDYFQRNGKNAWMSLG----GVF 247
           I+ IW++  G   I    Y+V  YDV  + A  PK+++    ++    W+  G     VF
Sbjct: 140 IIYIWYL*HGIDAIDDVLYHVETYDVTTIRASMPKFLMSMKIKSLYAIWIISGEESDEVF 319

Query: 248 LCIS 251
           L +S
Sbjct: 320 LSVS 331


>TC10215 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor response-like
           protein, partial (43%)
          Length = 837

 Score = 25.8 bits (55), Expect = 8.7
 Identities = 11/19 (57%), Positives = 12/19 (62%)
 Frame = -3

Query: 17  DIGTSPLYVLASTFPKGID 35
           DI TSP  V  + FPKG D
Sbjct: 835 DIATSPFSVTGAGFPKGAD 779


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.326    0.143    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,704,030
Number of Sequences: 28460
Number of extensions: 63566
Number of successful extensions: 392
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of query: 282
length of database: 4,897,600
effective HSP length: 89
effective length of query: 193
effective length of database: 2,364,660
effective search space: 456379380
effective search space used: 456379380
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)