BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146692.2 - phase: 0
(1061 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC10163 similar to UP|Q84RS0 (Q84RS0) ZR4 protein (Fragment), pa... 263 8e-71
BP053036 108 2e-48
AV422170 169 2e-42
BP042612 111 5e-25
TC10976 106 2e-23
TC8151 similar to UP|Q9LU80 (Q9LU80) Gb|AAF35409.1, partial (49%) 100 9e-22
TC8991 homologue to UP|Q8W111 (Q8W111) At1g76950/F22K20_5, parti... 99 3e-21
TC16253 similar to UP|Q8W111 (Q8W111) At1g76950/F22K20_5, partia... 97 1e-20
BP052305 79 3e-15
AV424101 67 2e-11
AU251645 62 5e-10
BP085602 60 1e-09
CB828383 57 2e-08
AV773721 55 6e-08
BP052927 52 6e-07
TC10773 similar to UP|Q9FN03 (Q9FN03) UVB-resistance protein UVR... 50 1e-06
BI418290 50 2e-06
TC13174 similar to UP|Q8GYL6 (Q8GYL6) Regulator of chromosome co... 46 3e-05
TC17419 weakly similar to UP|Q17796 (Q17796) Prion-like-(q/n-ric... 43 3e-04
BP035473 36 0.028
>TC10163 similar to UP|Q84RS0 (Q84RS0) ZR4 protein (Fragment), partial (33%)
Length = 975
Score = 263 bits (673), Expect = 8e-71
Identities = 132/159 (83%), Positives = 144/159 (90%), Gaps = 4/159 (2%)
Frame = +3
Query: 907 KSVKSPSIASFGSN----ELSFAAIDRLNIQATSPEADLTGSNTQLLSNGSSTVSNRSTG 962
++VKSPS+ASFGSN E+ +A+IDRLNIQATSPEADL GSN Q LSNGSSTVSNR+ G
Sbjct: 9 RNVKSPSLASFGSNPSSNEIGYASIDRLNIQATSPEADLAGSNNQSLSNGSSTVSNRNAG 188
Query: 963 QNKQSQSDSTNRNGSRTKDSESRSETEWVEQDEPGVYITLTSLPGGVIDLKRVRFSRKRF 1022
KQSQSDS NRNGSRTKDSESR+E+EWVEQDEPGVYITLTSLPGGV DLKRVRFSRKRF
Sbjct: 189 HTKQSQSDSNNRNGSRTKDSESRNESEWVEQDEPGVYITLTSLPGGVKDLKRVRFSRKRF 368
Query: 1023 SEKQAENWWAENRVRVYEQYNVRMVDKSSVGVGSEDLAN 1061
SEKQAE WWAENR RVYEQYNVRM+DKSSVGVGS+DLA+
Sbjct: 369 SEKQAEQWWAENRARVYEQYNVRMIDKSSVGVGSDDLAH 485
>BP053036
Length = 471
Score = 108 bits (271), Expect(2) = 2e-48
Identities = 40/64 (62%), Positives = 55/64 (85%)
Frame = +2
Query: 323 IELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYIS 382
++ VACGE+HTCAVT++G+L+TWG+G + GLLGHG VSHW+PKR+ GPLEG+ V+ ++
Sbjct: 29 VDFVACGEFHTCAVTMAGELFTWGDGTHKAGLLGHGTDVSHWIPKRIAGPLEGLQVALVT 208
Query: 383 CGPW 386
CGPW
Sbjct: 209 CGPW 220
Score = 102 bits (253), Expect(2) = 2e-48
Identities = 50/79 (63%), Positives = 59/79 (74%)
Frame = +1
Query: 389 AVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMV 448
A++TS GQLFTFGDGTFG LGHGDR++VS PREVESL GLRT+ +CGVWHTAAVV+++
Sbjct: 229 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVKLL* 408
Query: 449 GNSSSSNCSSGKLFTWGDG 467
N L WGDG
Sbjct: 409 HNPVQVYRQVNYLL-WGDG 462
Score = 60.5 bits (145), Expect(2) = 6e-15
Identities = 29/64 (45%), Positives = 41/64 (63%), Gaps = 3/64 (4%)
Frame = +2
Query: 378 VSYISCGPWHTAVVTSAGQLFTFGDGTF--GALGHGDRKSVSLPREVES-LKGLRTMRAS 434
V +++CG +HT VT AG+LFT+GDGT G LGHG S +P+ + L+GL+ +
Sbjct: 29 VDFVACGEFHTCAVTMAGELFTWGDGTHKAGLLGHGTDVSHWIPKRIAGPLEGLQVALVT 208
Query: 435 CGVW 438
CG W
Sbjct: 209 CGPW 220
Score = 51.6 bits (122), Expect(2) = 1e-08
Identities = 23/55 (41%), Positives = 37/55 (66%)
Frame = +1
Query: 282 ALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAV 336
AL+T G++F++G+ + G LGHG +V +P+ +++LS VACG +HT AV
Sbjct: 229 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAV 393
Score = 47.8 bits (112), Expect(2) = 6e-14
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 336 VTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVV 391
+T +G L+T+G+G + G+LGHG++ + P+ V L G+ ++CG WHTA V
Sbjct: 235 ITSTGQLFTFGDGTF--GVLGHGDRENVSYPREVES-LSGLRTIAVACGVWHTAAV 393
Score = 47.4 bits (111), Expect(2) = 6e-14
Identities = 26/64 (40%), Positives = 32/64 (49%), Gaps = 3/64 (4%)
Frame = +2
Query: 271 VQNIACGGRHAALVTKQGEIFSWGE--ESGGRLGHGVDSDVLHPKLI-DALSNTNIELVA 327
V +ACG H VT GE+F+WG+ G LGHG D PK I L + LV
Sbjct: 29 VDFVACGEFHTCAVTMAGELFTWGDGTHKAGLLGHGTDVSHWIPKRIAGPLEGLQVALVT 208
Query: 328 CGEY 331
CG +
Sbjct: 209 CGPW 220
Score = 43.9 bits (102), Expect = 1e-04
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +1
Query: 556 AVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAI 610
A++T +++T+G G G LGHGD ++ + P V++L ++ACG TAA+
Sbjct: 229 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAV 393
Score = 42.4 bits (98), Expect = 4e-04
Identities = 21/62 (33%), Positives = 32/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 545 VEEIACGAYHVAVLTLRNEVYTWGKGAN--GRLGHG-DTDDRNNPTLVDALKDKHVKSIA 601
V+ +ACG +H +T+ E++TWG G + G LGHG D + L+ V +
Sbjct: 29 VDFVACGEFHTCAVTMAGELFTWGDGTHKAGLLGHGTDVSHWIPKRIAGPLEGLQVALVT 208
Query: 602 CG 603
CG
Sbjct: 209 CG 214
Score = 38.1 bits (87), Expect(2) = 6e-15
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 457 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCV-ALVEHNFCQVACGHSLTVAL 506
S+G+LFT+GDG G LGHGD+E P V +L VACG T A+
Sbjct: 241 STGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAV 393
Score = 37.0 bits (84), Expect = 0.016
Identities = 21/56 (37%), Positives = 28/56 (49%), Gaps = 2/56 (3%)
Frame = +2
Query: 434 SCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVA 487
+CG +HT AV +G+LFTWGDG G LGHG + +P +A
Sbjct: 41 ACGEFHTCAVT------------MAGELFTWGDGTHKAGLLGHGTDVSHWIPKRIA 172
Score = 25.4 bits (54), Expect(2) = 1e-08
Identities = 16/54 (29%), Positives = 24/54 (43%), Gaps = 2/54 (3%)
Frame = +2
Query: 226 GDVFIWGEGTGDGVVGGGNHRVG-SGLGVKIDSLFPKALESAVV-LDVQNIACG 277
G++F WG+GT H+ G G G + PK + + L V + CG
Sbjct: 80 GELFTWGDGT---------HKAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCG 214
>AV422170
Length = 306
Score = 169 bits (429), Expect = 2e-42
Identities = 86/97 (88%), Positives = 89/97 (91%)
Frame = +1
Query: 733 VESRSSKKNKKLEFNSSRVSPVPNGGSQRGALNISKSFNPVFGSSKKFFSASVPGSRIVS 792
VES +K KLEFNSSRVSPVPNGGSQ GALNISKS NPVFGSSKKFFSASVPGSRIVS
Sbjct: 16 VESDLQRKTSKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVPGSRIVS 195
Query: 793 RATSPISRRPSPPRSTTPTPTLGGLTTPKIVVDDAKK 829
RATSPISRRPSPPRSTTPTPTLG LT+PKIVVDDAK+
Sbjct: 196 RATSPISRRPSPPRSTTPTPTLGSLTSPKIVVDDAKR 306
>BP042612
Length = 351
Score = 111 bits (278), Expect = 5e-25
Identities = 44/97 (45%), Positives = 67/97 (68%)
Frame = -1
Query: 299 GRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHG 358
G+LG +D D+ PK++D+LS +++ + CGEYHTCA+T G++YTWGN + + G
Sbjct: 339 GKLGQKIDMDISSPKIVDSLSGIHVKDIVCGEYHTCALTDFGEVYTWGNDVCSLDSVDKG 160
Query: 359 NQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAG 395
SHW+P ++ GPL+GI +S +SCG WHTA+ + G
Sbjct: 159 RIKSHWIPHKLTGPLDGISISSVSCGEWHTALSLAVG 49
Score = 54.7 bits (130), Expect(2) = 3e-11
Identities = 34/98 (34%), Positives = 52/98 (52%), Gaps = 3/98 (3%)
Frame = -1
Query: 352 YGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDG--TFGALG 409
+G LG + PK V+ L GIHV I CG +HT +T G+++T+G+ + ++
Sbjct: 342 WGKLGQKIDMDISSPKIVDS-LSGIHVKDIVCGEYHTCALTDFGEVYTWGNDVCSLDSVD 166
Query: 410 HGDRKSVSLPREVES-LKGLRTMRASCGVWHTAAVVEV 446
G KS +P ++ L G+ SCG WHTA + V
Sbjct: 165 KGRIKSHWIPHKLTGPLDGISISSVSCGEWHTALSLAV 52
Score = 48.9 bits (115), Expect = 4e-06
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = -1
Query: 251 LGVKIDSLF--PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEE--SGGRLGHG-V 305
LG KID PK ++S + V++I CG H +T GE+++WG + S + G +
Sbjct: 333 LGQKIDMDISSPKIVDSLSGIHVKDIVCGEYHTCALTDFGEVYTWGNDVCSLDSVDKGRI 154
Query: 306 DSDVLHPKLIDALSNTNIELVACGEYHT 333
S + KL L +I V+CGE+HT
Sbjct: 153 KSHWIPHKLTGPLDGISISSVSCGEWHT 70
Score = 45.1 bits (105), Expect = 6e-05
Identities = 20/34 (58%), Positives = 24/34 (69%), Gaps = 2/34 (5%)
Frame = -3
Query: 380 YISCGPWHTA--VVTSAGQLFTFGDGTFGALGHG 411
Y C W A +V+S G+LFT+GDGTFG LGHG
Sbjct: 103 YFKCFLWGMAHCIVSSCGRLFTYGDGTFGVLGHG 2
Score = 39.3 bits (90), Expect = 0.003
Identities = 23/77 (29%), Positives = 36/77 (45%), Gaps = 7/77 (9%)
Frame = -1
Query: 403 GTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLF 462
G +G LG +S P+ V+SL G+ CG +HT A+ + G+++
Sbjct: 348 GKWGKLGQKIDMDISSPKIVDSLSGIHVKDIVCGEYHTCALTDF------------GEVY 205
Query: 463 TWGDG-------DKGRL 472
TWG+ DKGR+
Sbjct: 204 TWGNDVCSLDSVDKGRI 154
Score = 35.8 bits (81), Expect = 0.036
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -1
Query: 520 YGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWG 568
+G+LG ++ L V++I CG YH LT EVYTWG
Sbjct: 342 WGKLGQKIDMDISSPKIVDSLSGIHVKDIVCGEYHTCALTDFGEVYTWG 196
Score = 34.7 bits (78), Expect = 0.081
Identities = 17/42 (40%), Positives = 24/42 (56%)
Frame = -1
Query: 569 KGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAI 610
+G G+LG D ++P +VD+L HVK I CG T A+
Sbjct: 351 QGKWGKLGQKIDMDISSPKIVDSLSGIHVKDIVCGEYHTCAL 226
Score = 32.0 bits (71), Expect(2) = 0.044
Identities = 19/65 (29%), Positives = 30/65 (45%), Gaps = 3/65 (4%)
Frame = -1
Query: 496 VACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGK---LPTRVEGKLLKSFVEEIACGA 552
+ CG T ALT G VY G+ V + K +P ++ G L + ++CG
Sbjct: 258 IVCGEYHTCALTDFGEVYTWGNDVCSLDSVDKGRIKSHWIPHKLTGPLDGISISSVSCGE 79
Query: 553 YHVAV 557
+H A+
Sbjct: 78 WHTAL 64
Score = 31.2 bits (69), Expect(2) = 3e-11
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3
Query: 457 SSGKLFTWGDGDKGRLGHG 475
S G+LFT+GDG G LGHG
Sbjct: 58 SCGRLFTYGDGTFGVLGHG 2
Score = 22.3 bits (46), Expect(2) = 0.044
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 564 VYTWGKGANGRLGHG 578
++T+G G G LGHG
Sbjct: 46 LFTYGDGTFGVLGHG 2
>TC10976
Length = 547
Score = 106 bits (264), Expect = 2e-23
Identities = 50/60 (83%), Positives = 56/60 (93%)
Frame = +1
Query: 1002 LTSLPGGVIDLKRVRFSRKRFSEKQAENWWAENRVRVYEQYNVRMVDKSSVGVGSEDLAN 1061
LTSLPG VIDLKRVRFSRKRFSEKQAE WWAENR RVYE Y+VR++DKSS+GVGSE+LA+
Sbjct: 1 LTSLPGDVIDLKRVRFSRKRFSEKQAEPWWAENRARVYELYHVRLIDKSSIGVGSEELAH 180
>TC8151 similar to UP|Q9LU80 (Q9LU80) Gb|AAF35409.1, partial (49%)
Length = 1165
Score = 100 bits (250), Expect = 9e-22
Identities = 75/253 (29%), Positives = 119/253 (46%), Gaps = 19/253 (7%)
Frame = +2
Query: 291 FSWGEESGGRLGHGVD-SDVLHPKLIDALSNTNIELVACGE-YHTCAVTLSGDLYTWGNG 348
FSWG S G+LGH D SDV L+ AL + + +A G Y C + + G
Sbjct: 2 FSWG--SDGKLGHHADPSDVEPHPLLGALEDIPVVQIAAGYCYLLCLACQPTGMSVYSVG 175
Query: 349 AYNYGLLGHGNQVSHWVPKRVNG-PLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGA 407
G LGHG + P+ + + + ++ G WH AVV G++ T+G G +G
Sbjct: 176 CGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGWGRYGC 355
Query: 408 LGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 467
LGHG+ S+P+ VE+L ++ + + G + T V + G ++++G G
Sbjct: 356 LGHGNEDCESVPKVVEALTNVKAVYVATGDYTTFLVSD------------DGDVYSFGCG 499
Query: 468 DKGRLGH-------GDKEAKLVP----TCVALVEHNFCQVACGHSL-----TVALTTSGH 511
+ LGH G++ A ++ T + + Q++ HS+ T ALT SG
Sbjct: 500 ESASLGHNAGNDVQGNRHANVLSPQLVTSLKQINERVVQISLTHSIYWNAHTFALTESGK 679
Query: 512 VYAMGSPVYGQLG 524
+YA G+ GQLG
Sbjct: 680 LYAFGAGDKGQLG 718
Score = 98.6 bits (244), Expect = 5e-21
Identities = 66/194 (34%), Positives = 100/194 (51%), Gaps = 10/194 (5%)
Frame = +2
Query: 290 IFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIE--LVACGEYHTCAVTLSGDLYTWGN 347
++S G GG+LGHG +D P+LI+ N++ +VA G +H V G + TWG
Sbjct: 161 VYSVGCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGW 340
Query: 348 GAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGA 407
G YG LGHGN+ VPK V L + Y++ G + T +V+ G +++FG G +
Sbjct: 341 G--RYGCLGHGNEDCESVPKVVEA-LTNVKAVYVATGDYTTFLVSDDGDVYSFGCGESAS 511
Query: 408 LGH-------GDR-KSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSG 459
LGH G+R +V P+ V SLK + + H+ + + + SG
Sbjct: 512 LGHNAGNDVQGNRHANVLSPQLVTSLKQINERVVQISLTHS-----IYWNAHTFALTESG 676
Query: 460 KLFTWGDGDKGRLG 473
KL+ +G GDKG+LG
Sbjct: 677 KLYAFGAGDKGQLG 718
Score = 88.6 bits (218), Expect = 5e-18
Identities = 61/185 (32%), Positives = 97/185 (51%), Gaps = 20/185 (10%)
Frame = +2
Query: 245 HRVGSGLGVKI------DSLFPKALESAVVLDVQN--IACGGRHAALVTKQGEIFSWGEE 296
+ VG GLG K+ D FP+ +E +L++Q +A G HAA+V K G + +WG
Sbjct: 164 YSVGCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGWG 343
Query: 297 SGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNG-----AYN 351
G LGHG + PK+++AL+N VA G+Y T V+ GD+Y++G G +N
Sbjct: 344 RYGCLGHGNEDCESVPKVVEALTNVKAVYVATGDYTTFLVSDDGDVYSFGCGESASLGHN 523
Query: 352 YGLLGHGNQVSHWVP-------KRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGT 404
G GN+ ++ + K++N + I +++ HT +T +G+L+ FG G
Sbjct: 524 AGNDVQGNRHANVLSPQLVTSLKQINERVVQISLTHSIYWNAHTFALTESGKLYAFGAGD 703
Query: 405 FGALG 409
G LG
Sbjct: 704 KGQLG 718
Score = 66.6 bits (161), Expect = 2e-11
Identities = 49/149 (32%), Positives = 75/149 (49%), Gaps = 7/149 (4%)
Frame = +2
Query: 462 FTWGDGDKGRLGH--GDKEAKLVPTCVALVEHNFCQVACGHSLTVALT---TSGHVYAMG 516
F+WG G+LGH + + P AL + Q+A G+ + L T VY++G
Sbjct: 2 FSWGSD--GKLGHHADPSDVEPHPLLGALEDIPVVQIAAGYCYLLCLACQPTGMSVYSVG 175
Query: 517 SPVYGQLGN-PQADGKLPTRVEG-KLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGR 574
+ G+LG+ + D K P +E ++L +A GA+H AV+ V TWG G G
Sbjct: 176 CGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGWGRYGC 355
Query: 575 LGHGDTDDRNNPTLVDALKDKHVKSIACG 603
LGHG+ D + P +V+AL + +A G
Sbjct: 356 LGHGNEDCESVPKVVEALTNVKAVYVATG 442
Score = 44.3 bits (103), Expect = 1e-04
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 12/206 (5%)
Frame = +2
Query: 400 FGDGTFGALGH-GDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSS 458
F G+ G LGH D V + +L+ + ++ + G + + G S
Sbjct: 2 FSWGSDGKLGHHADPSDVEPHPLLGALEDIPVVQIAAGYCYLLCLACQPTGMS------- 160
Query: 459 GKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHNFCQ---VACGHSLTVALTTSGHVYAM 515
+++ G G G+LGHG + + P + + Q VA G + G V
Sbjct: 161 --VYSVGCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTW 334
Query: 516 GSPVYGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRL 575
G YG LG+ D + +V L +A G Y +++ +VY++G G + L
Sbjct: 335 GWGRYGCLGHGNEDCESVPKVVEALTNVKAVYVATGDYTTFLVSDDGDVYSFGCGESASL 514
Query: 576 GHGDTDDRN--------NPTLVDALK 593
GH +D +P LV +LK
Sbjct: 515 GHNAGNDVQGNRHANVLSPQLVTSLK 592
>TC8991 homologue to UP|Q8W111 (Q8W111) At1g76950/F22K20_5, partial (6%)
Length = 651
Score = 99.4 bits (246), Expect = 3e-21
Identities = 45/65 (69%), Positives = 52/65 (79%)
Frame = +1
Query: 987 ETEWVEQDEPGVYITLTSLPGGVIDLKRVRFSRKRFSEKQAENWWAENRVRVYEQYNVRM 1046
E EW+EQ EPGVYITL +L G DLKRVRFSR+RF E QAE WW+ENR +VYE+YNVR
Sbjct: 31 EAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYEKYNVRS 210
Query: 1047 VDKSS 1051
DKS+
Sbjct: 211 TDKST 225
>TC16253 similar to UP|Q8W111 (Q8W111) At1g76950/F22K20_5, partial (6%)
Length = 743
Score = 97.4 bits (241), Expect = 1e-20
Identities = 45/65 (69%), Positives = 52/65 (79%)
Frame = +3
Query: 987 ETEWVEQDEPGVYITLTSLPGGVIDLKRVRFSRKRFSEKQAENWWAENRVRVYEQYNVRM 1046
E EW+EQ EPGVYITL +L G DLKRVRFSR++F E QAE WW+ENR +VYE+YNVR
Sbjct: 63 EAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRKFGENQAEIWWSENREKVYEKYNVRS 242
Query: 1047 VDKSS 1051
DKSS
Sbjct: 243 GDKSS 257
>BP052305
Length = 438
Score = 79.3 bits (194), Expect = 3e-15
Identities = 37/64 (57%), Positives = 44/64 (67%)
Frame = -1
Query: 981 DSESRSETEWVEQDEPGVYITLTSLPGGVIDLKRVRFSRKRFSEKQAENWWAENRVRVYE 1040
D+ + EWV Q EPGVYITLT+LP G LKRVRFSRKRF + +AE WW EN VY
Sbjct: 438 DTADGLKXEWVXQYEPGVYITLTTLPCGNTGLKRVRFSRKRFFQMEAERWWEENPSAVYH 259
Query: 1041 QYNV 1044
+Y +
Sbjct: 258 KYEI 247
>AV424101
Length = 235
Score = 66.6 bits (161), Expect = 2e-11
Identities = 38/88 (43%), Positives = 54/88 (61%)
Frame = +3
Query: 789 RIVSRATSPISRRPSPPRSTTPTPTLGGLTTPKIVVDDAKKTNDSLSQEVIKLRSQVESL 848
RI ++TSP+S + SP +S + DD K ND L+QEV+ LR+QV++L
Sbjct: 3 RISCQSTSPVSSKSSPRQSYED------------IHDDLKHRNDMLNQEVLSLRAQVDNL 146
Query: 849 TRKAQLQEIELERTSKQLKDAIAIAGEE 876
T K++ E EL+RT KQLK+ A+A EE
Sbjct: 147 TSKSRSLEAELDRTLKQLKEVTAVAAEE 230
>AU251645
Length = 392
Score = 62.0 bits (149), Expect = 5e-10
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Frame = +1
Query: 274 IACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELV--ACGEY 331
I+ G H ++T G ++SWG GRLG G ++D L P + + N+++V A G Y
Sbjct: 85 ISAGEAHTLVLTGNGSVYSWGRGMFGRLGVGSENDELSPVRVKFGNPNNVKIVGIAAGAY 264
Query: 332 HTCAVTLSGDLYTWGNGAYN-YGLLGHGNQVSH 363
H+ A+T G ++ WG YN YG LG+ + S+
Sbjct: 265 HSLALTEDGSVWCWG---YNIYGQLGNNGEDSN 354
Score = 53.9 bits (128), Expect = 1e-07
Identities = 32/95 (33%), Positives = 49/95 (50%), Gaps = 2/95 (2%)
Frame = +1
Query: 489 VEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKL-PTRVE-GKLLKSFVE 546
+ H ++ G + T+ LT +G VY+ G ++G+LG + +L P RV+ G +
Sbjct: 64 LSHKIVAISAGEAHTLVLTGNGSVYSWGRGMFGRLGVGSENDELSPVRVKFGNPNNVKIV 243
Query: 547 EIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTD 581
IA GAYH LT V+ WG G+LG+ D
Sbjct: 244 GIAAGAYHSLALTEDGSVWCWGYNIYGQLGNNGED 348
Score = 50.1 bits (118), Expect = 2e-06
Identities = 30/84 (35%), Positives = 42/84 (49%), Gaps = 3/84 (3%)
Frame = +1
Query: 458 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHNFCQV---ACGHSLTVALTTSGHVYA 514
+G +++WG G GRLG G + +L P V N ++ A G ++ALT G V+
Sbjct: 124 NGSVYSWGRGMFGRLGVGSENDELSPVRVKFGNPNNVKIVGIAAGAYHSLALTEDGSVWC 303
Query: 515 MGSPVYGQLGNPQADGKLPTRVEG 538
G +YGQLGN D EG
Sbjct: 304 WGYNIYGQLGNNGEDSNEEKYTEG 375
Score = 43.9 bits (102), Expect = 1e-04
Identities = 29/89 (32%), Positives = 41/89 (45%), Gaps = 2/89 (2%)
Frame = +1
Query: 524 GNPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDR 583
GN ++ G L ++ I+ G H VLT VY+WG+G GRLG G +D
Sbjct: 40 GNLESSGNLSHKIVA---------ISAGEAHTLVLTGNGSVYSWGRGMFGRLGVGSENDE 192
Query: 584 NNPTLVDALKDKHVK--SIACGTNFTAAI 610
+P V +VK IA G + A+
Sbjct: 193 LSPVRVKFGNPNNVKIVGIAAGAYHSLAL 279
>BP085602
Length = 372
Score = 60.5 bits (145), Expect = 1e-09
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Frame = +2
Query: 19 FEWKEEKHLKLSHVSRIISGQRTPIFQRY-PRPEKEYQSFSLIY--NDRSLDLICKDKDE 75
+ ++EKHL+LS V++I+ GQ QR +PEKEY SFSLIY +RSL+LICKDK +
Sbjct: 185 YSGQQEKHLRLSAVTKIVQGQGNIRSQRQIEQPEKEYHSFSLIYANGERSLELICKDKAQ 364
Query: 76 A 76
A
Sbjct: 365 A 367
>CB828383
Length = 372
Score = 56.6 bits (135), Expect = 2e-08
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +1
Query: 365 VPKRVNGPLEGIHVSY--ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREV 422
+P ++ G G +V + ++CG HTA + S G L+T+G FG LG G + P++V
Sbjct: 31 LPPQLFGCPAGTNVRWLDVACGREHTAAIASDGLLYTWGANDFGQLGDGTEERRKHPKKV 210
Query: 423 ESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 472
+ L+ SCG +A + + + S+G+L+ WG L
Sbjct: 211 KELESEFVKSVSCGAHCSACIAD---PRENDGTVSTGRLWVWGQNQGSNL 351
Score = 54.3 bits (129), Expect = 1e-07
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +1
Query: 547 EIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNF 606
++ACG H A + +YTWG G+LG G + R +P V L+ + VKS++CG +
Sbjct: 82 DVACGREHTAAIASDGLLYTWGANDFGQLGDGTEERRKHPKKVKELESEFVKSVSCGAHC 261
Query: 607 TAAI 610
+A I
Sbjct: 262 SACI 273
Score = 52.4 bits (124), Expect = 4e-07
Identities = 23/83 (27%), Positives = 41/83 (48%), Gaps = 9/83 (10%)
Frame = +1
Query: 273 NIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYH 332
++ACG H A + G +++WG G+LG G + HPK + L + ++ V+CG +
Sbjct: 82 DVACGREHTAAIASDGLLYTWGANDFGQLGDGTEERRKHPKKVKELESEFVKSVSCGAHC 261
Query: 333 TCAV---------TLSGDLYTWG 346
+ + +G L+ WG
Sbjct: 262 SACIADPRENDGTVSTGRLWVWG 330
Score = 44.3 bits (103), Expect = 1e-04
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Frame = +1
Query: 485 CVALVEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKSF 544
C A + VACG T A+ + G +Y G+ +GQLG+ + + + +L F
Sbjct: 52 CPAGTNVRWLDVACGREHTAAIASDGLLYTWGANDFGQLGDGTEERRKHPKKVKELESEF 231
Query: 545 VEEIACGAYHVAVLTLRNE---------VYTWGKGANGRL 575
V+ ++CGA+ A + E ++ WG+ L
Sbjct: 232 VKSVSCGAHCSACIADPRENDGTVSTGRLWVWGQNQGSNL 351
>AV773721
Length = 561
Score = 55.1 bits (131), Expect = 6e-08
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = -3
Query: 545 VEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDAL 592
V +I+ G H +T R VY+WG+G NG LG GDT DRN+P +++AL
Sbjct: 532 VVQISFGWRHTIAVTERANVYSWGRGTNGLLGQGDTVDRNSPKIIEAL 389
Score = 44.3 bits (103), Expect = 1e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -3
Query: 271 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGE 330
V I+ G RH VT++ ++SWG + G LG G D PK+I+ALS +CG+
Sbjct: 532 VVQISFGWRHTIAVTERANVYSWGRGTNGLLGQGDTVDRNSPKIIEALSVDG----SCGQ 365
Query: 331 Y 331
+
Sbjct: 364 H 362
Score = 38.9 bits (89), Expect = 0.004
Identities = 32/104 (30%), Positives = 46/104 (43%), Gaps = 10/104 (9%)
Frame = -3
Query: 326 VACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPK-----RVNGPLEGIHVSY 380
++ G HT AVT ++Y+WG G GLLG G+ V PK V+G G H+
Sbjct: 523 ISFGWRHTIAVTERANVYSWGRG--TNGLLGQGDTVDRNSPKIIEALSVDGSC-GQHIES 353
Query: 381 ISCGPWHTAVVTSAGQLFTF-----GDGTFGALGHGDRKSVSLP 419
P ++S + + G GHGDR +S+P
Sbjct: 352 SYSDPISGKSLSSLSERYAVVPDETVSGPTANPGHGDRFDLSVP 221
>BP052927
Length = 494
Score = 51.6 bits (122), Expect = 6e-07
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = -2
Query: 1001 TLTSLPGGVIDLKRVRFSRKRFSEKQAENWWAENRVRVYEQY 1042
T+ L G +L+RVRFSR+RF E A+ WW ENR R+ QY
Sbjct: 493 TIXQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQY 368
>TC10773 similar to UP|Q9FN03 (Q9FN03) UVB-resistance protein UVR8
(AT5g63860/MGI19_6), partial (17%)
Length = 568
Score = 50.4 bits (119), Expect = 1e-06
Identities = 20/35 (57%), Positives = 28/35 (79%)
Frame = +1
Query: 558 LTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDAL 592
+T R VY+WG+G NG+LG GDT DRN+P +++AL
Sbjct: 7 VTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEAL 111
Score = 37.7 bits (86), Expect = 0.010
Identities = 18/48 (37%), Positives = 29/48 (59%)
Frame = +1
Query: 284 VTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEY 331
VT++ ++SWG + G+LG G D PK+I+ALS +CG++
Sbjct: 7 VTERANVYSWGRGTNGQLGQGDTVDRNSPKIIEALSVDG----SCGQH 138
Score = 29.6 bits (65), Expect = 2.6
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Frame = +1
Query: 335 AVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPK-----RVNGPLEGIHVSYISCGPWHTA 389
AVT ++Y+WG G G LG G+ V PK V+G G H+ +
Sbjct: 4 AVTERANVYSWGRG--TNGQLGQGDTVDRNSPKIIEALSVDGSC-GQHIESSNTDQISGK 174
Query: 390 VVTSAGQLF------TFGDGTFGALGHGDRKSVSLP 419
++S + + T G GHGDR +S+P
Sbjct: 175 SLSSLSERYAVVPDETQVSGPTANPGHGDRFDLSVP 282
>BI418290
Length = 435
Score = 49.7 bits (117), Expect = 2e-06
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Frame = +1
Query: 436 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHN--F 493
G +HTA ++ + + S +T+G GD G+LGHG ++ L+PT V + N
Sbjct: 1 GAFHTA----LLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHL 168
Query: 494 CQVACGHSLTVALTTSGHVYAMG-------SPVYGQLGNPQADGKLPTRVEGKLLKSFV- 545
V CG T ++++G V++ G P + + D P + + +
Sbjct: 169 VCVDCGLFHTSGVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFP 348
Query: 546 --EEIACGAYHVAVLTLRN-EVYTWGKG 570
+++ CGA H V+ +V+ WG+G
Sbjct: 349 DPDKVVCGAAHTVVVGQEGYKVWAWGRG 432
Score = 48.9 bits (115), Expect = 4e-06
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +1
Query: 277 GGRHAALVTKQ------GEIFSW--GEESGGRLGHGVDSDVLHPK-LIDALSNTNIELVA 327
G H AL+T++ E W G G+LGHG L P +I+ N ++ V
Sbjct: 1 GAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVD 180
Query: 328 CGEYHTCAVTLSGDLYTWG 346
CG +HT V+ +GD+++WG
Sbjct: 181 CGLFHTSGVSSAGDVWSWG 237
Score = 45.1 bits (105), Expect = 6e-05
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = +1
Query: 329 GEYHTCAVTL------SGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYIS 382
G +HT +T + + W G + G LGHG S +P V E +H+ +
Sbjct: 1 GAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVD 180
Query: 383 CGPWHTAVVTSAGQLFTFG 401
CG +HT+ V+SAG ++++G
Sbjct: 181 CGLFHTSGVSSAGDVWSWG 237
Score = 44.7 bits (104), Expect = 8e-05
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Frame = +1
Query: 384 GPWHTAVVT--------SAGQLFTFGDGTFGALGHGDRKSVSLPREVESL-KGLRTMRAS 434
G +HTA++T S +TFG G G LGHG +S LP V L + + +
Sbjct: 1 GAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVD 180
Query: 435 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG---------DGDKGRLGHGDKEAKLVPTC 485
CG++HT+ V S+G +++WG D + GD L P
Sbjct: 181 CGLFHTSGV------------SSAGDVWSWGMQKGLGLCPDVSRAESDSGD---ALNPRL 315
Query: 486 VALVEH-----NFCQVACGHSLTVALTTSGH-VYAMG 516
++ H + +V CG + TV + G+ V+A G
Sbjct: 316 ISCEPHQPKFPDPDKVVCGAAHTVVVGQEGYKVWAWG 426
Score = 42.0 bits (97), Expect = 5e-04
Identities = 22/69 (31%), Positives = 38/69 (54%), Gaps = 9/69 (13%)
Frame = +1
Query: 551 GAYHVAVLTLRNE--------VYTWGKGANGRLGHGDTDDRNNPT-LVDALKDKHVKSIA 601
GA+H A+LT + +T+G+G NG+LGHG T PT +++ ++ H+ +
Sbjct: 1 GAFHTALLTRKKNPDDASESICWTFGRGDNGQLGHGTTQSTLLPTPVIELPENVHLVCVD 180
Query: 602 CGTNFTAAI 610
CG T+ +
Sbjct: 181 CGLFHTSGV 207
Score = 40.0 bits (92), Expect = 0.002
Identities = 37/138 (26%), Positives = 58/138 (41%), Gaps = 12/138 (8%)
Frame = +1
Query: 223 DALGDVFIWGEGTGDGVVGGGNHRVGSGLGVKIDSLFPK-ALESAVVLDVQNIACGGRHA 281
D + W G GD N ++G G +L P +E + + + CG H
Sbjct: 43 DDASESICWTFGRGD------NGQLGHG--TTQSTLLPTPVIELPENVHLVCVDCGLFHT 198
Query: 282 ALVTKQGEIFSWGEESGGRLGHGV------DSDVLHPKLIDALSN----TNIELVACGEY 331
+ V+ G+++SWG + G L V D L+P+LI + + + V CG
Sbjct: 199 SGVSSAGDVWSWGMQKGLGLCPDVSRAESDSGDALNPRLISCEPHQPKFPDPDKVVCGAA 378
Query: 332 HTCAVTLSG-DLYTWGNG 348
HT V G ++ WG G
Sbjct: 379 HTVVVGQEGYKVWAWGRG 432
>TC13174 similar to UP|Q8GYL6 (Q8GYL6) Regulator of chromosome condensation
like (Cell cycle regulatory protein), partial (25%)
Length = 519
Score = 46.2 bits (108), Expect = 3e-05
Identities = 47/144 (32%), Positives = 65/144 (44%), Gaps = 9/144 (6%)
Frame = +2
Query: 293 WGEESGGRLGH-----GVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGN 347
+G+ + G LG GV D P I +L + +I V G YH+ AVT G L+ WG
Sbjct: 83 YGDGTHGALGLPSSAVGVGLDAYEPTPIPSLPS-DIVSVHAGHYHSLAVTSQGHLWAWGR 259
Query: 348 GAYNYGLLGHGNQVSH--W-VPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGT 404
N LG G S W PK V G LE + V +A V G ++ G
Sbjct: 260 N--NEAQLGPGFSSSRESWNEPKMVVG-LENVKVGAAYASGVVSAAVGDDGSVWVRGKSK 430
Query: 405 FGALGHGDRKSVSL-PREVESLKG 427
G LG G + ++ P ++E+L G
Sbjct: 431 RGQLGLGKGVTEAVAPAKLEALSG 502
Score = 38.1 bits (87), Expect = 0.007
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Frame = +2
Query: 464 WGDGDKGRLGHGDKEAKL-----VPTCVALVEHNFCQVACGHSLTVALTTSGHVYAMGSP 518
+GDG G LG + PT + + + V GH ++A+T+ GH++A G
Sbjct: 83 YGDGTHGALGLPSSAVGVGLDAYEPTPIPSLPSDIVSVHAGHYHSLAVTSQGHLWAWGRN 262
Query: 519 VYGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYHV-----AVLTLRNEVYTWGKGANG 573
QLG P + E K++ +E + GA + A + V+ GK G
Sbjct: 263 NEAQLG-PGFSSSRESWNEPKMVVG-LENVKVGAAYASGVVSAAVGDDGSVWVRGKSKRG 436
Query: 574 RLGHG-DTDDRNNPTLVDALKDKHV 597
+LG G + P ++AL ++V
Sbjct: 437 QLGLGKGVTEAVAPAKLEALSGENV 511
Score = 37.0 bits (84), Expect = 0.016
Identities = 27/104 (25%), Positives = 45/104 (42%), Gaps = 9/104 (8%)
Frame = +2
Query: 516 GSPVYGQLGNPQA------DGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGK 569
G +G LG P + D PT + L S + + G YH +T + ++ WG+
Sbjct: 86 GDGTHGALGLPSSAVGVGLDAYEPTPIPS--LPSDIVSVHAGHYHSLAVTSQGHLWAWGR 259
Query: 570 GANGRLGHGDTDDR---NNPTLVDALKDKHVKSIACGTNFTAAI 610
+LG G + R N P +V L++ V + +AA+
Sbjct: 260 NNEAQLGPGFSSSRESWNEPKMVVGLENVKVGAAYASGVVSAAV 391
>TC17419 weakly similar to UP|Q17796 (Q17796)
Prion-like-(q/n-rich)-domain-bearing protein protein 9,
partial (5%)
Length = 621
Score = 42.7 bits (99), Expect = 3e-04
Identities = 27/98 (27%), Positives = 44/98 (44%)
Frame = +2
Query: 620 DQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDGCFNKL 679
+ + C C FN R+RH+C +CG C+ SS + N RVC CFN
Sbjct: 56 EAARCVVCSCSFNTFRRRHHCRSCGRTLCNEHSSDQMALPQFGLYSN--VRVCADCFNNS 229
Query: 680 RKTLETDSSSHSSVSRRGSINQGSLELIDKDDKLDTRS 717
R + H+S +I ++ +D D +D+++
Sbjct: 230 R----SQEVPHASSDGVNNITD-TISKLDIDGNVDSKT 328
>BP035473
Length = 572
Score = 36.2 bits (82), Expect = 0.028
Identities = 35/141 (24%), Positives = 57/141 (39%), Gaps = 10/141 (7%)
Frame = +2
Query: 888 KSLTAQLKDMAERLPVGTAKSVKS-PSIASFG-------SNELSFAAIDRL--NIQATSP 937
+S+T QLKDM + + +S++S P +S G N ++ D + + S
Sbjct: 143 RSITTQLKDMVLKFSGSSKQSLRSGPGSSSRGMRPIPNPENTVAGGVQDPNMGGVGSASA 322
Query: 938 EADLTGSNTQLLSNGSSTVSNRSTGQNKQSQSDSTNRNGSRTKDSESRSETEWVEQDEPG 997
A S Q++S + + + + + + +WV EPG
Sbjct: 323 RALHLRSALQIISGRTEHAIILGSADQAPPRGHESVVAAPDVAVEQEDDDRKWVSHAEPG 502
Query: 998 VYITLTSLPGGVIDLKRVRFS 1018
V I SLP G DLK + FS
Sbjct: 503 VIINFESLPDGGHDLKTIYFS 565
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.313 0.130 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,555,125
Number of Sequences: 28460
Number of extensions: 290479
Number of successful extensions: 1895
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 1740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1866
length of query: 1061
length of database: 4,897,600
effective HSP length: 100
effective length of query: 961
effective length of database: 2,051,600
effective search space: 1971587600
effective search space used: 1971587600
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146692.2