BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146569.7 + phase: 0
(166 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV418552 42 5e-05
AV408295 36 0.003
AV426624 34 0.011
TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fra... 34 0.015
TC9153 weakly similar to UP|HS82_YEAST (P02829) Heat shock prote... 33 0.025
AV418628 33 0.025
BP036446 33 0.025
TC11276 weakly similar to UP|HDA1_CHICK (P56517) Histone deacety... 32 0.043
AV422734 32 0.043
BP034655 32 0.056
BP085186 32 0.056
TC8309 UP|O22306 (O22306) Nlj21, complete 32 0.056
TC19488 similar to UP|MRAW_BUCAP (O85295) S-adenosyl-methyltrans... 32 0.073
AU089483 32 0.073
TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , p... 32 0.073
BP048314 32 0.073
TC11092 32 0.073
BP047752 32 0.073
BP031757 31 0.096
AI967777 31 0.12
>AV418552
Length = 386
Score = 42.0 bits (97), Expect = 5e-05
Identities = 28/88 (31%), Positives = 30/88 (33%), Gaps = 4/88 (4%)
Frame = -3
Query: 51 SCNSCC---KTNCNGKCEKCTC-GSAKCDGIQCVTICFKCENPKSCCECKPIIKSCCNNK 106
SC SCC + C C C C S C C C C CC CK +SCC
Sbjct: 276 SCASCCWSCASCCCWSCVSCCCWSSVSCSCESCCWSCASCCCWSCCCSCK-*GRSCCWG* 100
Query: 107 KCDDGCTPKKPPSPKVQQCPQWCTCSRC 134
K D C WC C C
Sbjct: 99 KYDSIC---------------WCCCISC 61
Score = 33.9 bits (76), Expect = 0.015
Identities = 22/86 (25%), Positives = 28/86 (31%), Gaps = 11/86 (12%)
Frame = -3
Query: 60 CNGKCEKCTCGSA--------KCDGIQCVTICFKCENPKSCCECKPIIKSCCNNK---KC 108
C G C C CG + C C + C+ C SCC C + CC + C
Sbjct: 354 C*GSC*NCCCGKSCCWSCVC*CCVSCSCASCCWSC---ASCC-CWSCVSCCCWSSVSCSC 187
Query: 109 DDGCTPKKPPSPKVQQCPQWCTCSRC 134
+ C C W C C
Sbjct: 186 ESCCW-------SCASCCCWSCCCSC 130
>AV408295
Length = 426
Score = 36.2 bits (82), Expect = 0.003
Identities = 20/31 (64%), Positives = 23/31 (73%), Gaps = 3/31 (9%)
Frame = +3
Query: 15 EEVKKKTEEEKKKEEEKKKE---EEKKKMME 42
EE +KKTEEEKK EE+KKE EE+KK E
Sbjct: 195 EEEEKKTEEEKKPAEEEKKEEVVEEEKKPAE 287
Score = 33.1 bits (74), Expect = 0.025
Identities = 16/24 (66%), Positives = 18/24 (74%)
Frame = +3
Query: 16 EVKKKTEEEKKKEEEKKKEEEKKK 39
E K + EEEKK EEEKK EE+KK
Sbjct: 180 EEKVEEEEEKKTEEEKKPAEEEKK 251
Score = 31.2 bits (69), Expect = 0.096
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKKMME 42
+EV EEK +EEE+KK EE+KK E
Sbjct: 156 DEVAAAATEEKVEEEEEKKTEEEKKPAE 239
Score = 30.0 bits (66), Expect = 0.21
Identities = 14/22 (63%), Positives = 17/22 (76%)
Frame = +3
Query: 21 TEEEKKKEEEKKKEEEKKKMME 42
TEE+ ++EEEKK EEEKK E
Sbjct: 177 TEEKVEEEEEKKTEEEKKPAEE 242
Score = 28.1 bits (61), Expect = 0.81
Identities = 17/37 (45%), Positives = 22/37 (58%), Gaps = 2/37 (5%)
Frame = +3
Query: 14 VEEVKKKTEEEKKKEEEKK--KEEEKKKMMEACRTVL 48
VEE KK EEEKK E E + E+K ++EA V+
Sbjct: 261 VEEEKKPAEEEKKAEAEGEATTSGEEKNVVEAVTEVV 371
>AV426624
Length = 422
Score = 34.3 bits (77), Expect = 0.011
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +1
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKKMMEACRTV 47
E+ K+ EKKK+++KKK+++KKK M A R +
Sbjct: 319 EKKSKRVLREKKKKKKKKKKKKKKKKMSASRFI 417
>TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fragment),
partial (6%)
Length = 806
Score = 33.9 bits (76), Expect = 0.015
Identities = 24/75 (32%), Positives = 27/75 (36%), Gaps = 12/75 (16%)
Frame = -3
Query: 50 GSCNSCCKTNCNGKCEKCTCGSAKC--DGIQCVTI-----CFKCENPKSCC-----ECKP 97
GSC C NC C C+C S C G C I C+ C + CC C
Sbjct: 225 GSC*CCNCCNCGSCCCGCSCESCCC*S*GSCCCCIWESCCCWTCGSCCCCCCWSWVSCGG 46
Query: 98 IIKSCCNNKKCDDGC 112
SCC C C
Sbjct: 45 CCCSCCCCCSCGSCC 1
>TC9153 weakly similar to UP|HS82_YEAST (P02829) Heat shock protein HSP82,
partial (4%)
Length = 760
Score = 33.1 bits (74), Expect = 0.025
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 11 ILSVEEVKKKTEEEKKKEEEKKKEEEKKKMME 42
ILSV K++ ++EKKKEE KK E+KK E
Sbjct: 305 ILSVGPAKEEKKDEKKKEEGKKPVEKKKDPKE 400
>AV418628
Length = 309
Score = 33.1 bits (74), Expect = 0.025
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -2
Query: 52 CNSCCK---TNCNGKCEKCTCGSAKCDGIQCVTICFKCEN--PKSCCEC 95
C SCC ++C+ C +C S + G +C C C++ P C C
Sbjct: 152 CQSCCPSRCSSCSSCCRPSSCRSGRRQGGRCRCRCCCCQSCCPSRCSSC 6
>BP036446
Length = 522
Score = 33.1 bits (74), Expect = 0.025
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +3
Query: 114 PKKPPSPKVQ----QCPQWCTCSRCYGYAPYQPYCNPCPPPNYMVCYDPNPEP-CSI 165
P P P +Q Q C CS+C AP PC PP+ P+P P CS+
Sbjct: 204 PDHPSGPFLQTQDTQAHTSCYCSKCCQTAPASSSMLPCTPPSAPDSSAPHPAPSCSL 374
>TC11276 weakly similar to UP|HDA1_CHICK (P56517) Histone deacetylase 1
(HD1), partial (5%)
Length = 636
Score = 32.3 bits (72), Expect = 0.043
Identities = 21/32 (65%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +3
Query: 15 EEVKKKTEEEKKKEEEKK---KEEEKKKMMEA 43
EE KK EE KKEEEKK KEEEKKK A
Sbjct: 114 EEAKK---EEPKKEEEKKDEKKEEEKKKEQPA 200
Score = 28.9 bits (63), Expect = 0.47
Identities = 13/27 (48%), Positives = 20/27 (73%)
Frame = +3
Query: 12 LSVEEVKKKTEEEKKKEEEKKKEEEKK 38
+SV K+ ++E+ K+EE +KEEEKK
Sbjct: 3 VSVGPAKEPEKKEEPKKEEPQKEEEKK 83
Score = 28.1 bits (61), Expect = 0.81
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKK 38
E ++ ++E+ K+EE KKEEEKK
Sbjct: 87 EPKSEEPQKEEAKKEEPKKEEEKK 158
Score = 25.4 bits (54), Expect = 5.2
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +3
Query: 9 VTILSVEEVKKKTE---EEKKKEEEKKKEEEKKK 39
V++ +E +KK E EE +KEEEKK E + ++
Sbjct: 3 VSVGPAKEPEKKEEPKKEEPQKEEEKKDEPKSEE 104
>AV422734
Length = 448
Score = 32.3 bits (72), Expect = 0.043
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = -3
Query: 35 EEKKKMMEACRTVLFGSCNSCCKTNCNGKCEKCTCGSAKCDGIQCVTICFKCENPKSCCE 94
E K+++ AC C CC NC KC C C I C C C CC
Sbjct: 251 EGKREIAAAC------CCCCCCFCNCCNS-RKCCCCCCCC*SISCCWCC*CCCC*C*CCW 93
Query: 95 CKPIIKS 101
C S
Sbjct: 92 CNAFASS 72
Score = 26.9 bits (58), Expect = 1.8
Identities = 10/24 (41%), Positives = 14/24 (57%)
Frame = -3
Query: 85 KCENPKSCCECKPIIKSCCNNKKC 108
K E +CC C +CCN++KC
Sbjct: 245 KREIAAACCCCCCCFCNCCNSRKC 174
>BP034655
Length = 517
Score = 32.0 bits (71), Expect = 0.056
Identities = 13/33 (39%), Positives = 27/33 (81%)
Frame = +2
Query: 10 TILSVEEVKKKTEEEKKKEEEKKKEEEKKKMME 42
T+ ++ KKK +++KKK+++KKK+++ K+MM+
Sbjct: 140 TMKRKKKKKKKKKKKKKKKKKKKKKKKTKRMMK 238
Score = 31.2 bits (69), Expect = 0.096
Identities = 13/32 (40%), Positives = 25/32 (77%)
Frame = +2
Query: 10 TILSVEEVKKKTEEEKKKEEEKKKEEEKKKMM 41
T + ++ KKK +++KKK+++KKK+++K K M
Sbjct: 137 TTMKRKKKKKKKKKKKKKKKKKKKKKKKTKRM 232
Score = 30.4 bits (67), Expect = 0.16
Identities = 12/29 (41%), Positives = 24/29 (82%)
Frame = +2
Query: 17 VKKKTEEEKKKEEEKKKEEEKKKMMEACR 45
+K+K +++KKK+++KKK+++KKK + R
Sbjct: 143 MKRKKKKKKKKKKKKKKKKKKKKKKKTKR 229
Score = 29.3 bits (64), Expect = 0.36
Identities = 12/38 (31%), Positives = 26/38 (67%)
Frame = +2
Query: 11 ILSVEEVKKKTEEEKKKEEEKKKEEEKKKMMEACRTVL 48
IL K+ +++KKK+++KKK+++KKK + + ++
Sbjct: 122 ILDSPTTMKRKKKKKKKKKKKKKKKKKKKKKKKTKRMM 235
Score = 26.6 bits (57), Expect = 2.4
Identities = 10/25 (40%), Positives = 21/25 (84%)
Frame = +1
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKK 39
EE +++ EEE+++EEE++ EE+ ++
Sbjct: 166 EEEEEEEEEEEEEEEEEEDEEDDEE 240
Score = 25.4 bits (54), Expect = 5.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 18 KKKTEEEKKKEEEKKKEEEKKKMME 42
KKK +++KKK+++K K KK M+
Sbjct: 179 KKKKKKKKKKKKKKTKRMMKKTKMK 253
>BP085186
Length = 388
Score = 32.0 bits (71), Expect = 0.056
Identities = 12/25 (48%), Positives = 22/25 (88%)
Frame = -2
Query: 18 KKKTEEEKKKEEEKKKEEEKKKMME 42
KKK +++KKK+++KKK+ ++KK M+
Sbjct: 246 KKKKKKKKKKKKKKKKQNQRKKRMK 172
Score = 30.8 bits (68), Expect = 0.12
Identities = 16/43 (37%), Positives = 25/43 (57%), Gaps = 5/43 (11%)
Frame = -2
Query: 18 KKKTEEEKKKEEEKKKEEEKKKMMEACRT-----VLFGSCNSC 55
KKK +++KKK+++KK+ + KK+M T SC SC
Sbjct: 243 KKKKKKKKKKKKKKKQNQRKKRMKRKMSTPKKEKEKTPSCKSC 115
Score = 30.0 bits (66), Expect = 0.21
Identities = 11/24 (45%), Positives = 23/24 (95%)
Frame = -2
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKK 38
+E+KKK +++KKK+++KKK+++K+
Sbjct: 267 KEMKKKKKKKKKKKKKKKKKKKKQ 196
Score = 28.9 bits (63), Expect = 0.47
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -1
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKK 39
EE +++ EEE+++EEE + EEEK +
Sbjct: 247 EEEEEEEEEEEEEEEEAEPEEEKNE 173
Score = 28.5 bits (62), Expect = 0.62
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = -1
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKKMMEACRT 46
EE +++ EEE+++EEE+ + EE+K E T
Sbjct: 250 EEEEEEEEEEEEEEEEEAEPEEEKNEEENVNT 155
Score = 28.5 bits (62), Expect = 0.62
Identities = 10/26 (38%), Positives = 23/26 (88%)
Frame = -2
Query: 14 VEEVKKKTEEEKKKEEEKKKEEEKKK 39
+++ KKK +++KKK+++KKK++ ++K
Sbjct: 261 MKKKKKKKKKKKKKKKKKKKKQNQRK 184
Score = 28.1 bits (61), Expect = 0.81
Identities = 12/28 (42%), Positives = 22/28 (77%)
Frame = -1
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKKMME 42
EE +++ EEE+++EEE++ E E++K E
Sbjct: 253 EEEEEEEEEEEEEEEEEEAEPEEEKNEE 170
Score = 26.9 bits (58), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (63%)
Frame = -1
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKKMME 42
EE +++ EEE+ + EE+K EEE E
Sbjct: 232 EEEEEEEEEEEAEPEEEKNEEENVNTQE 149
Score = 26.9 bits (58), Expect = 1.8
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = -1
Query: 11 ILSVEEVKKKTEEEKKKEEEKKKEEEKKKMMEA 43
++S + + EE+++EEE+++EEE+++ EA
Sbjct: 295 LISPDNADGEGNEEEEEEEEEEEEEEEEEEEEA 197
Score = 26.2 bits (56), Expect = 3.1
Identities = 10/21 (47%), Positives = 19/21 (89%)
Frame = -1
Query: 22 EEEKKKEEEKKKEEEKKKMME 42
EEE+++EEE+++EEE+++ E
Sbjct: 256 EEEEEEEEEEEEEEEEEEEAE 194
Score = 25.8 bits (55), Expect = 4.0
Identities = 10/25 (40%), Positives = 21/25 (84%)
Frame = -1
Query: 18 KKKTEEEKKKEEEKKKEEEKKKMME 42
+++ EEE+++EEE+++EEE+ + E
Sbjct: 259 EEEEEEEEEEEEEEEEEEEEAEPEE 185
Score = 25.4 bits (54), Expect = 5.2
Identities = 10/28 (35%), Positives = 22/28 (77%)
Frame = -1
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKKMME 42
EE +++ EEE+++EEE+++ E +++ E
Sbjct: 256 EEEEEEEEEEEEEEEEEEEAEPEEEKNE 173
>TC8309 UP|O22306 (O22306) Nlj21, complete
Length = 1063
Score = 32.0 bits (71), Expect = 0.056
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Frame = +3
Query: 11 ILSVEEVKKKTEEEKKKEE---EKKKEEEKKKMMEACRT--------VLFG----SCNSC 55
+++ E +K EEEK E EKK+EEE K+ A +T VLF SC SC
Sbjct: 642 VVNTEAPDEKKEEEKLDTEGSDEKKEEEEVIKVAPAEKTE*RR*RENVLFRGLLFSCMSC 821
Query: 56 CKTNCNGKC 64
C C C
Sbjct: 822 CFAPCLFLC 848
>TC19488 similar to UP|MRAW_BUCAP (O85295) S-adenosyl-methyltransferase mraW
, partial (5%)
Length = 502
Score = 31.6 bits (70), Expect = 0.073
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 10 TILSVEEVKKKTEEEKKKEEEKKKE 34
T+ +EE+KKK E+ KK+ EE KK+
Sbjct: 252 TLQELEEIKKKLEDSKKRVEEMKKK 326
>AU089483
Length = 396
Score = 31.6 bits (70), Expect = 0.073
Identities = 15/59 (25%), Positives = 29/59 (48%)
Frame = +3
Query: 22 EEEKKKEEEKKKEEEKKKMMEACRTVLFGSCNSCCKTNCNGKCEKCTCGSAKCDGIQCV 80
E E+++E E+++E E++++M + L+ CK G TC CD + +
Sbjct: 9 ERERERERERERERERERLMNKWKFSLY---LKTCKAKWGGD*GLSTCMMRGCDSLHLI 176
>TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , partial
(89%)
Length = 1672
Score = 31.6 bits (70), Expect = 0.073
Identities = 14/38 (36%), Positives = 28/38 (72%)
Frame = +3
Query: 6 FNCVTILSVEEVKKKTEEEKKKEEEKKKEEEKKKMMEA 43
FN +L ++ KK +++KKK+++KKK+++K++ M A
Sbjct: 135 FNFNQLLQEKKKKKLKKKKKKKKKKKKKKKKKQRKMVA 248
Score = 28.5 bits (62), Expect = 0.62
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 5 KFNCVTILSVEEVKKKTEEEKKKEEEKKKEEEKK 38
+F V EE ++ EEE+++EEE+++EE +K
Sbjct: 137 QFQSVIAREEEEEVEEEEEEEEEEEEEEEEEAEK 238
Score = 24.6 bits (52), Expect = 9.0
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +3
Query: 22 EEEKKKEEEKKKEEEKKKMMEACRTVLFGSCNSCCKTN 59
+++KK +++KKK+++KKK + + + C+ N
Sbjct: 162 KKKKKLKKKKKKKKKKKKKKKKKQRKMVAEAEIVCQHN 275
>BP048314
Length = 394
Score = 31.6 bits (70), Expect = 0.073
Identities = 16/35 (45%), Positives = 26/35 (73%), Gaps = 1/35 (2%)
Frame = +1
Query: 18 KKKTEEEKKKEEEKKKEEEKKKMMEAC-RTVLFGS 51
K + EEE+++EEE+++EEE++ M + C R LF S
Sbjct: 178 KHEEEEEEEEEEEEEEEEEEEAMCKDCLRNELFVS 282
Score = 28.9 bits (63), Expect = 0.47
Identities = 11/33 (33%), Positives = 25/33 (75%)
Frame = +2
Query: 2 LKKKFNCVTILSVEEVKKKTEEEKKKEEEKKKE 34
L+ F ++++++ KKK +++KKK+++KKK+
Sbjct: 146 LRVMFLVARVINMKKKKKKKKKKKKKKKKKKKQ 244
Score = 28.1 bits (61), Expect = 0.81
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 9 VTILSVEEVKKKTEEEKKKEEEKKKEEEKKKMMEACRTVLFGSCN----SCCK 57
V L + K +++KKK+++KKK+++KK+ + + F CCK
Sbjct: 152 VMFLVARVINMKKKKKKKKKKKKKKKKKKKQCVRIVCEMSFS*VQRFGLGCCK 310
>TC11092
Length = 632
Score = 31.6 bits (70), Expect = 0.073
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -3
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKKMME 42
E+ KKK E +KK E KKKE+ ++K+ E
Sbjct: 138 EQ*KKKIESQKKTENIKKKEKRRRKIWE 55
Score = 25.0 bits (53), Expect = 6.9
Identities = 14/37 (37%), Positives = 23/37 (61%), Gaps = 3/37 (8%)
Frame = -3
Query: 16 EVKKKTEEEKKKEEEKKKEEEKKKMME---ACRTVLF 49
E +KKTE KKKE+ ++K E ++++ C +LF
Sbjct: 117 ESQKKTENIKKKEKRRRKIWEFREIINLD*IC*FILF 7
>BP047752
Length = 399
Score = 31.6 bits (70), Expect = 0.073
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Frame = +2
Query: 50 GSCNSCCKTNCNGKCEKCTCGSAKCDGIQCVTICFKCE-------NPKSCCEC 95
G C + CK +C+ + TC S CV CF C P SC +C
Sbjct: 77 GECPAACKRHCSTGKPQWTCFS-------CVNCCFACRCIPDDETEPSSCRKC 214
>BP031757
Length = 507
Score = 31.2 bits (69), Expect = 0.096
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 15 EEVKKKTEEEKKKEEEKKKEEEK 37
EE KKK + KKKEEE+++E+E+
Sbjct: 209 EEKKKKKKSRKKKEEEEEEEQEE 277
Score = 30.4 bits (67), Expect = 0.16
Identities = 12/28 (42%), Positives = 22/28 (77%)
Frame = +2
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKKMME 42
E+ +++ E++KKK+ KKKEEE+++ E
Sbjct: 191 EDYEEEEEKKKKKKSRKKKEEEEEEEQE 274
Score = 26.2 bits (56), Expect = 3.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKKMME 42
EE KKK KKK +KK+EEE+++ E
Sbjct: 206 EEEKKK----KKKSRKKKEEEEEEEQEE 277
Score = 26.2 bits (56), Expect = 3.1
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 15 EEVKKKTEEEKKKEEEKKKEEEKKKMME 42
E+ + K E+ ++EEEKKK+++ +K E
Sbjct: 167 EDNEDKDGEDYEEEEEKKKKKKSRKKKE 250
>AI967777
Length = 461
Score = 30.8 bits (68), Expect = 0.12
Identities = 21/79 (26%), Positives = 35/79 (43%), Gaps = 19/79 (24%)
Frame = -2
Query: 20 KTEEEKKKEEEKKKEEEK---KKMMEACRTVLFGSCNSCCKTNCNGKCE----------K 66
K +K +EK+K+ ++++ + +LF S +SC + +G C
Sbjct: 358 KPHHQKNVWQEKEKKRYS*LFRRLLSSIFFLLFRSSHSCSRCRRHGSCSCSNFYTTCSLH 179
Query: 67 CTCGSAKC------DGIQC 79
CTC +KC DG QC
Sbjct: 178 CTCYFSKCCYASNKDGPQC 122
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.135 0.478
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,736,732
Number of Sequences: 28460
Number of extensions: 149695
Number of successful extensions: 2005
Number of sequences better than 10.0: 218
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of query: 166
length of database: 4,897,600
effective HSP length: 83
effective length of query: 83
effective length of database: 2,535,420
effective search space: 210439860
effective search space used: 210439860
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)
Medicago: description of AC146569.7