BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146568.1 + phase: 0
(610 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF177767 271 1e-76
BP043024 276 7e-75
AV407690 249 1e-66
TC15467 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial... 213 7e-56
TC19275 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial... 188 2e-48
BP039650 183 6e-47
TC16393 similar to UP|Q93YZ6 (Q93YZ6) AT4g00750/F15P23_1, partia... 167 3e-42
AV766252 139 1e-33
TC10083 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial... 137 4e-33
AV422410 134 4e-32
BP051839 126 1e-29
AV428170 124 4e-29
AI967524 117 7e-27
BI420376 111 3e-25
AV406972 106 9e-24
TC9980 similar to UP|AAR23721 (AAR23721) At1g29470, partial (15%) 106 9e-24
TC12816 similar to UP|O23292 (O23292) Ankyrin homolog (Ankyrin l... 102 1e-22
AV416050 99 3e-21
BI419208 90 9e-19
TC18865 similar to UP|Q94II3 (Q94II3) ERD3 protein, partial (24%) 89 3e-18
>BF177767
Length = 494
Score = 271 bits (693), Expect(2) = 1e-76
Identities = 131/145 (90%), Positives = 137/145 (94%)
Frame = +3
Query: 424 GVSSETYQNDNKMWKKHVNAYKKINSLLDSGRYRNIMDMNAGLGSFAAAIHSSKSWVMNV 483
GVSSETYQ+DN W+KHVNAYKKIN LLD+GRYRNIMDMNAGLGSFAAAI SSK WVMNV
Sbjct: 15 GVSSETYQDDNTKWRKHVNAYKKINRLLDTGRYRNIMDMNAGLGSFAAAIESSKLWVMNV 194
Query: 484 VPTIAEKSTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNTEDILLE 543
VPTIAEK+TLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHA+GLFSLY+ KCN EDILLE
Sbjct: 195 VPTIAEKNTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHAHGLFSLYKSKCNIEDILLE 374
Query: 544 MDRILRPEGAVIIRDEVDVLIKVKK 568
MDRILRPEGAVI RDEVDVLIKVKK
Sbjct: 375 MDRILRPEGAVIFRDEVDVLIKVKK 449
Score = 34.7 bits (78), Expect = 0.046
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = +3
Query: 201 INDGTVRTALDTGCGVASWGAYLWSRNVVAMSFAPRDSHEAQVQFALERGVPAVIGVFGT 260
++ G R +D G+ S+ A + S + M+ P + + + ERG+ + +
Sbjct: 96 LDTGRYRNIMDMNAGLGSFAAAIESSKLWVMNVVPTIAEKNTLGVIYERGLIGIYHDWCE 275
Query: 261 IKLPYPSRAFDMAHCSRC--LIPWGANDGMYMMEVDRVLRPGG 301
YP R +D+ H L N ++E+DR+LRP G
Sbjct: 276 GFSTYP-RTYDLIHAHGLFSLYKSKCNIEDILLEMDRILRPEG 401
Score = 33.1 bits (74), Expect(2) = 1e-76
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 567 KKLIGGMRWNMKLVDH 582
+KL+GGMRW+ KLVDH
Sbjct: 445 RKLVGGMRWDTKLVDH 492
>BP043024
Length = 447
Score = 276 bits (706), Expect = 7e-75
Identities = 129/135 (95%), Positives = 132/135 (97%)
Frame = -1
Query: 175 FRFPGGGTQFPQGADKYIDQLASVIPINDGTVRTALDTGCGVASWGAYLWSRNVVAMSFA 234
FRFPGGGTQFPQGADKYIDQLASVIP+ +GTVRTALDTGCGVASWGAYLWSRNVVAMSFA
Sbjct: 447 FRFPGGGTQFPQGADKYIDQLASVIPMKNGTVRTALDTGCGVASWGAYLWSRNVVAMSFA 268
Query: 235 PRDSHEAQVQFALERGVPAVIGVFGTIKLPYPSRAFDMAHCSRCLIPWGANDGMYMMEVD 294
PRDSHEAQVQFALERGVPAVIGV GTIKLPYPS AFDMAHCSRCLIPWGANDG+YMMEVD
Sbjct: 267 PRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSAAFDMAHCSRCLIPWGANDGIYMMEVD 88
Query: 295 RVLRPGGYWVLSGPP 309
RVLRPGGYWVLSGPP
Sbjct: 87 RVLRPGGYWVLSGPP 43
Score = 38.9 bits (89), Expect = 0.002
Identities = 16/24 (66%), Positives = 18/24 (74%), Gaps = 2/24 (8%)
Frame = -3
Query: 302 YWVLS--GPPINWKVNYKPWQRPK 323
+W+L G INWKVNYK WQRPK
Sbjct: 73 WWLLGAFGSSINWKVNYKSWQRPK 2
Score = 32.7 bits (73), Expect = 0.17
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = -1
Query: 451 LDSGRYRNIMDMNAGLGSFAAAIHSSKSWVMNVVPTIAEKSTLGVIYERGLIGIYHDWCE 510
+ +G R +D G+ S+ A + S M+ P + ++ + ERG+ +
Sbjct: 369 MKNGTVRTALDTGCGVASWGAYLWSRNVVAMSFAPRDSHEAQVQFALERGVPAVIGVLGT 190
Query: 511 GFSTYPRT-YDLIHANGLFSLYQDKCNTEDILLEMDRILRPEG 552
YP +D+ H + L N ++E+DR+LRP G
Sbjct: 189 IKLPYPSAAFDMAHCSRC--LIPWGANDGIYMMEVDRVLRPGG 67
>AV407690
Length = 427
Score = 249 bits (635), Expect = 1e-66
Identities = 113/140 (80%), Positives = 125/140 (88%)
Frame = +3
Query: 209 ALDTGCGVASWGAYLWSRNVVAMSFAPRDSHEAQVQFALERGVPAVIGVFGTIKLPYPSR 268
ALDTGCGVASWGAYL RNV+AMSFAP+D+HEAQVQFALERGVPAVIGV GTI LPYPSR
Sbjct: 3 ALDTGCGVASWGAYLLKRNVLAMSFAPKDNHEAQVQFALERGVPAVIGVLGTIHLPYPSR 182
Query: 269 AFDMAHCSRCLIPWGANDGMYMMEVDRVLRPGGYWVLSGPPINWKVNYKPWQRPKEELEE 328
AFDMA CSRCLIPW AN+G Y+MEVDRVLRPGGYW+LSGPPINWK Y+ WQR KE+++
Sbjct: 183 AFDMAQCSRCLIPWAANEGKYLMEVDRVLRPGGYWILSGPPINWKTYYQTWQRSKEDVKA 362
Query: 329 EQRKIEEVAKKLCWEKKSEK 348
EQR IEE+A+ LCWEKK EK
Sbjct: 363 EQRNIEELAESLCWEKKYEK 422
Score = 28.5 bits (62), Expect = 3.3
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +3
Query: 460 MDMNAGLGSFAAAIHSSKSWVMNVVPTIAEKSTLGVIYERGLIGIYHDWCEGFSTYP-RT 518
+D G+ S+ A + M+ P ++ + ERG+ + YP R
Sbjct: 6 LDTGCGVASWGAYLLKRNVLAMSFAPKDNHEAQVQFALERGVPAVIGVLGTIHLPYPSRA 185
Query: 519 YDLIHANGLFSLYQDKCNTEDILLEMDRILRPEGAVII 556
+D+ + L N L+E+DR+LRP G I+
Sbjct: 186 FDMAQCSRC--LIPWAANEGKYLMEVDRVLRPGGYWIL 293
>TC15467 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial (18%)
Length = 749
Score = 213 bits (542), Expect = 7e-56
Identities = 97/120 (80%), Positives = 109/120 (90%)
Frame = +3
Query: 490 KSTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNTEDILLEMDRILR 549
++TLGV++ERGLIGIYHDWCEGFSTYPRTYDLIHAN LFSLYQ CN EDILLEMDRILR
Sbjct: 9 QNTLGVVFERGLIGIYHDWCEGFSTYPRTYDLIHANDLFSLYQGTCNLEDILLEMDRILR 188
Query: 550 PEGAVIIRDEVDVLIKVKKLIGGMRWNMKLVDHEDGPLVPEKVLIAVKQYWVTDGNSTST 609
PEG VIIRDEVDVLIKVKK+IGGMRW+ K+VDHEDGP VP K+L+AVKQYWV G +T++
Sbjct: 189 PEGVVIIRDEVDVLIKVKKIIGGMRWDTKMVDHEDGPFVPRKILVAVKQYWVGSGKNTTS 368
>TC19275 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial (18%)
Length = 664
Score = 188 bits (477), Expect = 2e-48
Identities = 86/119 (72%), Positives = 98/119 (82%)
Frame = +1
Query: 491 STLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNTEDILLEMDRILRP 550
STLG IYERGLIGIYHDWCE STYPRTYDLIHA+ LFSLY D+C EDILLEMDRILRP
Sbjct: 7 STLGAIYERGLIGIYHDWCEAMSTYPRTYDLIHADSLFSLYNDRCKLEDILLEMDRILRP 186
Query: 551 EGAVIIRDEVDVLIKVKKLIGGMRWNMKLVDHEDGPLVPEKVLIAVKQYWVTDGNSTST 609
EGAVIIRD+VD+L+KVK + G+ W+ +VDHEDGPLV EK+L+AVK+YW S T
Sbjct: 187 EGAVIIRDDVDMLVKVKSIANGLEWDSVIVDHEDGPLVREKLLLAVKKYWTAPATSGKT 363
>BP039650
Length = 488
Score = 183 bits (465), Expect = 6e-47
Identities = 86/96 (89%), Positives = 89/96 (92%)
Frame = +3
Query: 1 MAKPSAADNRTRSSVQIFIVVGLCCFFYILGAWQRSGFGKGDSIALEITKNNAECDVVPN 60
MAKPS+AD RTRSS+QIFIVVGLCCFFYILGAWQRSGFGKGDSIALEITKNNAECDVVPN
Sbjct: 201 MAKPSSADGRTRSSLQIFIVVGLCCFFYILGAWQRSGFGKGDSIALEITKNNAECDVVPN 380
Query: 61 LSFDSHHAGEVSQIDESNSNTKVFKPCEARYTDYTP 96
LSFDSHH G+VSQIDE SN KVFKPC ARY DYTP
Sbjct: 381 LSFDSHHGGQVSQIDEGGSNPKVFKPCAARYNDYTP 488
>TC16393 similar to UP|Q93YZ6 (Q93YZ6) AT4g00750/F15P23_1, partial (79%)
Length = 584
Score = 167 bits (424), Expect = 3e-42
Identities = 74/112 (66%), Positives = 93/112 (82%)
Frame = +3
Query: 489 EKSTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNTEDILLEMDRIL 548
E +TLGVIYERGLIG Y +WCE STYPRTYD IH + +F+LYQ++CN EDILLEMDRIL
Sbjct: 3 EINTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFTLYQNRCNIEDILLEMDRIL 182
Query: 549 RPEGAVIIRDEVDVLIKVKKLIGGMRWNMKLVDHEDGPLVPEKVLIAVKQYW 600
RP+G+VI+RD+VDVL+KVK+ M+W+ ++ DHE GP EK+L+AVKQYW
Sbjct: 183 RPQGSVILRDDVDVLLKVKRFADTMQWDTRIADHEKGPHQREKILVAVKQYW 338
>AV766252
Length = 585
Score = 139 bits (351), Expect = 1e-33
Identities = 62/94 (65%), Positives = 77/94 (80%)
Frame = -1
Query: 513 STYPRTYDLIHANGLFSLYQDKCNTEDILLEMDRILRPEGAVIIRDEVDVLIKVKKLIGG 572
STYPRTYDLIH + +FSLY D+C EDILLEMDR+LRPEG+VIIR +VD+LIKVK ++ G
Sbjct: 579 STYPRTYDLIHGDSIFSLYNDRCELEDILLEMDRVLRPEGSVIIRGDVDILIKVKSIVNG 400
Query: 573 MRWNMKLVDHEDGPLVPEKVLIAVKQYWVTDGNS 606
M W ++VDHEDGPL EK+L AVK+YW + +S
Sbjct: 399 MDWESQIVDHEDGPLEREKLLFAVKKYWTSPASS 298
>TC10083 similar to UP|Q94C19 (Q94C19) At1g26850/T2P11_4, partial (11%)
Length = 769
Score = 137 bits (346), Expect = 4e-33
Identities = 63/76 (82%), Positives = 71/76 (92%)
Frame = +3
Query: 534 KCNTEDILLEMDRILRPEGAVIIRDEVDVLIKVKKLIGGMRWNMKLVDHEDGPLVPEKVL 593
+CN EDILLEMDRILRPEGAVI RDEVDVLIKVK+++GGMRW+ K+VDHEDGPLVPEK+L
Sbjct: 69 RCNIEDILLEMDRILRPEGAVIFRDEVDVLIKVKQIVGGMRWDTKMVDHEDGPLVPEKIL 248
Query: 594 IAVKQYWVTDGNSTST 609
IAVKQYWV D N+TST
Sbjct: 249 IAVKQYWVADSNATST 296
>AV422410
Length = 440
Score = 134 bits (337), Expect = 4e-32
Identities = 74/150 (49%), Positives = 94/150 (62%), Gaps = 5/150 (3%)
Frame = +2
Query: 385 YKKLKACVTPTPKVSG----GDLKPFPDRLYAIPPRVSSGSIPGVSSETYQNDNKMWKKH 440
Y KLK CV+ T V G G + +P+RL A PR ++ ++ YQ D + W +
Sbjct: 2 YFKLKKCVSRTSSVKGEYSIGVIPKWPERLTAPQPR---STLLKNGADVYQADTRRWLRR 172
Query: 441 VNAYK-KINSLLDSGRYRNIMDMNAGLGSFAAAIHSSKSWVMNVVPTIAEKSTLGVIYER 499
V YK +N L + RN+MDMNA G FAAA+ S WVMNVVP + STL VI++R
Sbjct: 173 VAYYKHSLNMKLGTSSVRNVMDMNAFFGGFAAALISDPVWVMNVVPA-RKPSTLDVIFDR 349
Query: 500 GLIGIYHDWCEGFSTYPRTYDLIHANGLFS 529
GLIG+YHDWCE FSTYPRTYDLIH + + S
Sbjct: 350 GLIGVYHDWCEPFSTYPRTYDLIHVSSIES 439
>BP051839
Length = 551
Score = 126 bits (316), Expect = 1e-29
Identities = 71/161 (44%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Frame = +1
Query: 375 CESSDPDDVWYKKLKACVTPTPKVSGG-DLKPFPDRLYAIPPRVSSGSIPGVSS--ETYQ 431
C SS + Y LKAC+T P G ++ +P RL+ P R+ S + S E ++
Sbjct: 82 CASS----IMYVGLKACITQLPSDGYGVNVTTWPSRLHQPPDRLQSIKQDAIISRVELFR 249
Query: 432 NDNKMWKKHVNAYKKINSLLDSGRYRNIMDMNAGLGSFAAAIHSSK--SWVMNVVPTIAE 489
++K W + +++Y + + RN+MDM AG G FAAA+H + WVMNVVP ++
Sbjct: 250 AESKYWNEIIDSYVRAYRWKEYN-LRNVMDMRAGFGGFAAALHDLQIDCWVMNVVP-VSG 423
Query: 490 KSTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSL 530
+TL V+Y+RGLIG+ HDWCE F TYPRTYDL+HA GLFS+
Sbjct: 424 FNTLPVLYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSV 546
>AV428170
Length = 405
Score = 124 bits (311), Expect = 4e-29
Identities = 63/138 (45%), Positives = 86/138 (61%), Gaps = 7/138 (5%)
Frame = +3
Query: 352 AIWQKMTDTESCRSRQDDSSVEFCESSDPDDVWYKKLKACVTPTPKVS------GGDLKP 405
AIWQK + C++ + E ++PD WY ++ C++P P+VS GG L+
Sbjct: 3 AIWQKAQNHLDCKANRPICQAE----NNPDKAWYTDMQTCLSPLPEVSSKEETAGGALEN 170
Query: 406 FPDRLYAIPPRVSSGSIPGVSSETYQNDNKMWKKHVNAYKKINSLLDS-GRYRNIMDMNA 464
+PDR+ A PPR+ G I GV+SET+ DN++WKK V+ YKK+N+ L GRYRN +DMNA
Sbjct: 171 WPDRVKATPPRIFMGVIKGVTSETFSEDNELWKKRVSYYKKVNNQLGKPGRYRNFLDMNA 350
Query: 465 GLGSFAAAIHSSKSWVMN 482
LG FAAA WVMN
Sbjct: 351 NLGGFAAAFIKYPVWVMN 404
>AI967524
Length = 460
Score = 117 bits (292), Expect = 7e-27
Identities = 62/141 (43%), Positives = 83/141 (57%), Gaps = 4/141 (2%)
Frame = +2
Query: 93 DYTPCQDQRRAMTFPRENMNY--RERHCPPEEEKLHCMIPAPKGYVTPFPWPKSRDYVPY 150
D+ PC D +A+ +Y RER CP EE C++ P+GY P WPKSR+ + Y
Sbjct: 44 DFIPCLDNLKAIKHLPITKHYEHRERQCP--EEPPTCLVSLPEGYKRPIEWPKSREKIWY 217
Query: 151 ANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIP-INDG-TVRT 208
+N P+ L K QNW++ G FPGGGTQF GA YID +A +P I+ G R
Sbjct: 218 SNVPHTKLAEFKGHQNWVKATGEYLTFPGGGTQFKHGALHYIDTIAQSVPDISWGQQTRV 397
Query: 209 ALDTGCGVASWGAYLWSRNVV 229
LD GCGVAS+G +L+ R+V+
Sbjct: 398 ILDVGCGVASFGGFLFERDVL 460
>BI420376
Length = 562
Score = 111 bits (278), Expect = 3e-25
Identities = 64/172 (37%), Positives = 85/172 (49%), Gaps = 10/172 (5%)
Frame = +1
Query: 1 MAKPSAADNRTRSSVQIFIVVGLCCFFYILGAWQR----------SGFGKGDSIALEITK 50
MAKP+ R I + LC FY++G WQ S F + L T
Sbjct: 67 MAKPNKPLTRL---YYITFTIILCTLFYLIGLWQHPTNTATAAVGSHFSAVNCPHLNSTS 237
Query: 51 NNAECDVVPNLSFDSHHAGEVSQIDESNSNTKVFKPCEARYTDYTPCQDQRRAMTFPREN 110
D L F + H E+ PC+ +++TPC+D +R++ FPR+
Sbjct: 238 TTTSSDT---LDFSARHYNPDPPPTEAGVTHA--PPCDVSLSEHTPCEDVQRSLRFPRDR 402
Query: 111 MNYRERHCPPEEEKLHCMIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEK 162
+ YRERHCP E+ L C IPAP GY P WP+SRD+ YAN P+K LTVEK
Sbjct: 403 LIYRERHCPAPEDALRCRIPAPFGYRVPPRWPESRDWAWYANVPHKELTVEK 558
>AV406972
Length = 168
Score = 106 bits (265), Expect = 9e-24
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = +2
Query: 115 ERHCPPEEEKLHCMIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWI 168
ERH PPE+EKLHC+IPAPKGY TPFPWPKSRDY YAN PYK LTVEKA+QNW+
Sbjct: 5 ERHPPPEKEKLHCLIPAPKGYTTPFPWPKSRDYAYYANVPYKHLTVEKAVQNWV 166
>TC9980 similar to UP|AAR23721 (AAR23721) At1g29470, partial (15%)
Length = 709
Score = 106 bits (265), Expect = 9e-24
Identities = 47/100 (47%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
Frame = +3
Query: 496 IYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNTEDILLEMDRILRPEGAVI 555
IYERGL IYHDWCE FSTYPR+YDL+HA+ LFS +++CN ++ E+DR+LRP+G +I
Sbjct: 3 IYERGLFXIYHDWCESFSTYPRSYDLLHADSLFSKLKERCNIVAVIAEVDRMLRPQGYLI 182
Query: 556 IRDEVDVLIKVKKLIGGMRWNMKLVDHE--DGPLVPEKVL 593
IRD V+ + +++ + + W+++ + DG L +K L
Sbjct: 183 IRDNVETIGEIESMTKSLHWDIQFTYSKLGDGLLCIQKTL 302
>TC12816 similar to UP|O23292 (O23292) Ankyrin homolog (Ankyrin like
protein), partial (14%)
Length = 419
Score = 102 bits (255), Expect = 1e-22
Identities = 58/138 (42%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Frame = +2
Query: 375 CESS-DPDDVWYKKLKACVTP----TPKVSGGDLKPFPDRLYAIPPRVSSGSIPGVSSET 429
C+S DPD VW ++AC+TP + G L P+P RL + PPR++ G S+E
Sbjct: 17 CQSDEDPDAVWGVNMEACITPYSDHVNRAKGSGLAPWPARLTSPPPRLADF---GYSNEM 187
Query: 430 YQNDNKMWKKHVNAYKKINS-LLDSGRYRNIMDMNAGLGSFAAAIHSSKSWVMNVVPTIA 488
++ D ++W++ V Y + S + S RNIMDM A +GSFAAA+ WVMNVVP
Sbjct: 188 FEKDTELWQRRVEKYWNLLSPKISSNTLRNIMDMKASMGSFAAALRDKDVWVMNVVPQDG 367
Query: 489 EKSTLGVIYERGLIGIYH 506
+TL ++Y+RGLIG H
Sbjct: 368 -LNTLKLVYDRGLIGSTH 418
>AV416050
Length = 355
Score = 98.6 bits (244), Expect = 3e-21
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 7/100 (7%)
Frame = +2
Query: 374 FCESSDPDDVWYKKLKACVTPTPKVS------GGDLKPFPDRLYAIPPRVSSGSIPGVSS 427
+CE+ DPD WY KL C+TP P+V+ GG+L +P+RL +IPPR+ S S+ G+++
Sbjct: 56 YCEAQDPDMAWYTKLDTCLTPLPEVNDIKEVAGGELTKWPERLTSIPPRIRSESLKGINA 235
Query: 428 ETYQNDNKMWKKHVNAYKKIN-SLLDSGRYRNIMDMNAGL 466
E ++ D ++WKK V YK + L + GRYRN++DMN+ L
Sbjct: 236 EMFKEDTQLWKKRVAYYKTQDPQLAERGRYRNLLDMNSYL 355
>BI419208
Length = 361
Score = 90.1 bits (222), Expect = 9e-19
Identities = 44/133 (33%), Positives = 71/133 (53%)
Frame = +3
Query: 218 SWGAYLWSRNVVAMSFAPRDSHEAQVQFALERGVPAVIGVFGTIKLPYPSRAFDMAHCSR 277
S+ A L + V+ +S +D Q ALERG P+V+ FG +LP+PS FD HC
Sbjct: 3 SFVATLLDKEVLTLSLGLKDDLVDLAQVALERGFPSVVSPFGRRRLPFPSYVFDAVHCGG 182
Query: 278 CLIPWGANDGMYMMEVDRVLRPGGYWVLSGPPINWKVNYKPWQRPKEELEEEQRKIEEVA 337
C IPW +N G ++E++R+LRPGGY+++S K + E++ + +
Sbjct: 183 CSIPWHSNGGKLLLEMNRILRPGGYFIMS---------------TKHDSFEQEEAMTMLT 317
Query: 338 KKLCWEKKSEKAE 350
+CW + K++
Sbjct: 318 ASICWNILAHKSD 356
Score = 28.9 bits (63), Expect = 2.5
Identities = 21/68 (30%), Positives = 31/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 495 VIYERGLIGIYHDWCEGFSTYPR-TYDLIHANGLFSLYQDKCNTEDILLEMDRILRPEGA 553
V ERG + + +P +D +H G + N +LLEM+RILRP G
Sbjct: 84 VALERGFPSVVSPFGRRRLPFPSYVFDAVHCGGCSIPWHS--NGGKLLLEMNRILRPGGY 257
Query: 554 VIIRDEVD 561
I+ + D
Sbjct: 258 FIMSTKHD 281
>TC18865 similar to UP|Q94II3 (Q94II3) ERD3 protein, partial (24%)
Length = 452
Score = 88.6 bits (218), Expect = 3e-18
Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Frame = +2
Query: 325 ELEEEQRKIEEVAKKLCWEKKSEKAEIAIWQKMTDTESCRSRQDDSSVEFCESS-DPDDV 383
E + K++++ +C++ ++K +IA+WQK D +S C+ S +PD
Sbjct: 20 EQRSDYNKLQDLLTSMCFKLYNKKDDIAVWQKAKDNNCYDKLSLESYPPKCDDSLEPDSG 199
Query: 384 WYKKLKAC-VTPTPKVSGGDL---KPFPDRLYAIPPRVSSGSIPGVSSETYQNDNKMWKK 439
WY L+ C V P PK L + +P+RL++ P R++ + G SS T+ +D+ WKK
Sbjct: 200 WYTPLRPCFVVPNPKYKKSALTYMRKWPERLHSSPERITG--VQGSSSSTFSHDDSKWKK 373
Query: 440 HVNAYKKINSLLDSGRYRNIMDMN 463
+ YKK+ L + + RN+MDMN
Sbjct: 374 RIPHYKKLLPDLGTSKIRNVMDMN 445
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.318 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,191,409
Number of Sequences: 28460
Number of extensions: 183436
Number of successful extensions: 942
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of query: 610
length of database: 4,897,600
effective HSP length: 96
effective length of query: 514
effective length of database: 2,165,440
effective search space: 1113036160
effective search space used: 1113036160
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146568.1