TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146567.11 - phase: 0 
         (331 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AU251584                                                              208  9e-55
TC18693 weakly similar to UP|Q84TE3 (Q84TE3) At2g03510, partial ...    76  9e-15
CB827710                                                               36  0.008
TC9302 similar to UP|BGLT_TRIRP (P26205) Cyanogenic beta-glucosi...    28  2.1
BP053180                                                               27  3.6
BP065430                                                               27  3.6
BP074586                                                               26  8.1
BP049435                                                               26  8.1
BP034000                                                               26  8.1

>AU251584 
          Length = 350

 Score =  208 bits (530), Expect = 9e-55
 Identities = 109/136 (80%), Positives = 110/136 (80%)
 Frame = +1

Query: 77  GTKGGVMIVFGKIEVVNRLHKESVYETLLNYGVQYDKTWIYDKIHHEINQFCSSHSLQQV 136
           GTKGGVMI F KIE                    YDKTWIYDKIHHEINQFCSSHSLQQV
Sbjct: 1   GTKGGVMINFEKIE--------------------YDKTWIYDKIHHEINQFCSSHSLQQV 120

Query: 137 YIDVFDQIDEKMKDALQVDCTRYAPGIEIIGVRVTKPNIPESIRHNFEQMEEERTKVLIA 196
           YIDVFDQIDEKMKDALQ DCTRYAPGIEIIGVRVTKP IP SIR NFEQMEEERTKVLIA
Sbjct: 121 YIDVFDQIDEKMKDALQGDCTRYAPGIEIIGVRVTKPTIPSSIRRNFEQMEEERTKVLIA 300

Query: 197 IEKQKVSEKEAETMKK 212
           IEKQ+VSEKEAETMKK
Sbjct: 301 IEKQRVSEKEAETMKK 348


>TC18693 weakly similar to UP|Q84TE3 (Q84TE3) At2g03510, partial (10%)
          Length = 427

 Score = 75.9 bits (185), Expect = 9e-15
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = +3

Query: 284 KFIESIANNTKIFFGDKIPNMILDQRLLGNFLVEEVPRGAATKTKADI 331
           KFIES+ NNTKIFFG+KIP MILDQRLLGN L++E  RGAATK KADI
Sbjct: 3   KFIESVTNNTKIFFGEKIPGMILDQRLLGN-LLQEASRGAATKAKADI 143


>CB827710 
          Length = 560

 Score = 36.2 bits (82), Expect = 0.008
 Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
 Frame = +1

Query: 179 IRHNFEQMEEERTKVLIAIEK-QKVSEKEAET--MKKMAISEAEKNANVSKILMEQKLSE 235
           I    +  EEE TK+L  +EK QKV+ +++ T  +K++  +  +++A++ +IL E +  +
Sbjct: 100 ISSEIQNREEEHTKLLADLEKQQKVASRKSYTHRIKEITKNSRKQDADIERILKETREVQ 279

Query: 236 KDSARRQEEIENAMYLARE 254
            +S   QE +     +A E
Sbjct: 280 LESNSIQERLHRTYAVADE 336


>TC9302 similar to UP|BGLT_TRIRP (P26205) Cyanogenic beta-glucosidase
           precursor  (Linamarase) (Fragment) , partial (58%)
          Length = 867

 Score = 28.1 bits (61), Expect = 2.1
 Identities = 15/62 (24%), Positives = 34/62 (54%)
 Frame = +2

Query: 172 KPNIPESIRHNFEQMEEERTKVLIAIEKQKVSEKEAETMKKMAISEAEKNANVSKILMEQ 231
           KP+I ++  HN+ +   +R+   +A+++    +++   MK M +     + + S+IL + 
Sbjct: 212 KPSIWDTYAHNYSERIVDRSNGDVAVDEYHRYKEDVGIMKSMNMDAYRFSISWSRILPKG 391

Query: 232 KL 233
           KL
Sbjct: 392 KL 397


>BP053180 
          Length = 497

 Score = 27.3 bits (59), Expect = 3.6
 Identities = 8/27 (29%), Positives = 16/27 (58%)
 Frame = -3

Query: 2   PYYLQVLVPSASPSFKNTMAIVHQVPE 28
           P+  ++   +  P FK T+ ++H +PE
Sbjct: 150 PFEAELFTSTVPPCFKTTLKVIHNLPE 70


>BP065430 
          Length = 164

 Score = 27.3 bits (59), Expect = 3.6
 Identities = 11/19 (57%), Positives = 13/19 (67%)
 Frame = +1

Query: 122 HEINQFCSSHSLQQVYIDV 140
           H INQFC   SL +VY D+
Sbjct: 16  HSINQFCYKVSLYRVYSDI 72


>BP074586 
          Length = 482

 Score = 26.2 bits (56), Expect = 8.1
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 171 TKPNIPESIRHNFEQM 186
           T+PN+PE + H+FE +
Sbjct: 194 TEPNLPEDLHHSFEDI 147


>BP049435 
          Length = 485

 Score = 26.2 bits (56), Expect = 8.1
 Identities = 14/37 (37%), Positives = 21/37 (55%)
 Frame = +3

Query: 187 EEERTKVLIAIEKQKVSEKEAETMKKMAISEAEKNAN 223
           EEE   V   +E+++  E E    K++A  EA+ NAN
Sbjct: 309 EEEPESVYEVLERKRQREIEEWRAKQIASGEAKDNAN 419


>BP034000 
          Length = 369

 Score = 26.2 bits (56), Expect = 8.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 112 DKTWIYDKIHHEINQFCSSHSL 133
           D  W+    HH +  FC SHSL
Sbjct: 271 DSYWV*VTHHHRVQFFCVSHSL 206


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.318    0.135    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,467,838
Number of Sequences: 28460
Number of extensions: 50286
Number of successful extensions: 257
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of query: 331
length of database: 4,897,600
effective HSP length: 91
effective length of query: 240
effective length of database: 2,307,740
effective search space: 553857600
effective search space used: 553857600
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)