
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146559.11 - phase: 0
(367 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14230 291 2e-79
BP040561 266 3e-72
TC14231 260 2e-70
AV767701 252 8e-68
TC10837 244 2e-65
TC11616 similar to UP|Q9SVU5 (Q9SVU5) Proline-rich APG-like prot... 230 3e-61
TC10139 similar to UP|Q9SVU5 (Q9SVU5) Proline-rich APG-like prot... 223 5e-59
TC12983 194 3e-50
TC12378 173 4e-44
TC19700 similar to UP|Q9SVU5 (Q9SVU5) Proline-rich APG-like prot... 162 1e-40
BP041040 137 2e-33
BI420239 119 1e-27
AV427493 117 3e-27
TC15855 116 5e-27
TC10793 110 4e-25
AV770406 106 7e-24
BP034926 102 8e-23
BI420145 101 2e-22
TC18753 99 9e-22
BG662032 95 2e-20
>TC14230
Length = 740
Score = 291 bits (744), Expect = 2e-79
Identities = 146/200 (73%), Positives = 164/200 (82%)
Frame = +1
Query: 1 MASSLMLCCSYILMINLFVGFDLAYAQPKRAFFVFGDSVADNGNNNFLTTTARADAPPYG 60
MASSL I + L + AQ RAFFVFGDS+ D+GNN+FL TTARADAPPYG
Sbjct: 46 MASSLGFGFCTITSLVLVLFLSSVSAQHTRAFFVFGDSLVDSGNNDFLATTARADAPPYG 225
Query: 61 IDFPTHEPTGRFSNGLNIPDLTSERLGLEPSLPYLSPLLVGEKLLVGANFASAGVGILND 120
IDFPTH PTGRFSNGLNIPDL S LGLEP+LPYLSPLLVGEKLL+GANFASAG+GILND
Sbjct: 226 IDFPTHRPTGRFSNGLNIPDLISLELGLEPTLPYLSPLLVGEKLLIGANFASAGIGILND 405
Query: 121 TGFQFLQIIHIGKQLDLFNQYQQKLSAQIGAEGAKQLVNKAIVLIMLGGNDFVNNYYLVP 180
TG QFL IIHI KQL LF QYQ+++SA IG EG + LVN+A+ LI LGGNDFVNNYYLVP
Sbjct: 406 TGIQFLHIIHIEKQLKLFQQYQKRVSAHIGREGTRNLVNRALFLITLGGNDFVNNYYLVP 585
Query: 181 FSARSRQFSLPNYVTYLISE 200
+SARSRQ+SLP+YV Y+ISE
Sbjct: 586 YSARSRQYSLPDYVRYIISE 645
>BP040561
Length = 515
Score = 266 bits (681), Expect = 3e-72
Identities = 130/174 (74%), Positives = 150/174 (85%)
Frame = +1
Query: 5 LMLCCSYILMINLFVGFDLAYAQPKRAFFVFGDSVADNGNNNFLTTTARADAPPYGIDFP 64
++ C +++ +LF+ D + RAFFVFGDS+ DNGNN+FL TTARADAPPYGIDFP
Sbjct: 1 VLYCWLCVIVTSLFMAVD---STQTRAFFVFGDSLVDNGNNDFLATTARADAPPYGIDFP 171
Query: 65 THEPTGRFSNGLNIPDLTSERLGLEPSLPYLSPLLVGEKLLVGANFASAGVGILNDTGFQ 124
TH+PTGRFSNGLNIPDL SE+LGLEP++PYLSPLL+GEKLLVGANFASAG+GILNDTGFQ
Sbjct: 172 THKPTGRFSNGLNIPDLISEQLGLEPTMPYLSPLLMGEKLLVGANFASAGIGILNDTGFQ 351
Query: 125 FLQIIHIGKQLDLFNQYQQKLSAQIGAEGAKQLVNKAIVLIMLGGNDFVNNYYL 178
FL IIH+ KQL LF YQQ+LSAQIG EG K+LVNKA+VLI LGGNDFVNNYYL
Sbjct: 352 FLNIIHMYKQLKLFQHYQQRLSAQIGPEGTKKLVNKALVLITLGGNDFVNNYYL 513
>TC14231
Length = 803
Score = 260 bits (665), Expect = 2e-70
Identities = 118/164 (71%), Positives = 144/164 (86%)
Frame = +2
Query: 202 KKILQRLYDLGARRVLVTGTGPMGCAPAELALKSRNGDCDAELMRAASLYNPQLVQMITQ 261
+++L+++YDLGARRVLVTGTGPMGC P LA++SR GDCD EL RAASLYNPQLV MI
Sbjct: 5 REVLRKMYDLGARRVLVTGTGPMGCVPPXLAMRSRTGDCDVELXRAASLYNPQLVNMIKG 184
Query: 262 LNREIGDDVFIAVNAHKMHMDFITNPKAFGFVTAKDACCGQGRFNGIGLCTPISKLCPNR 321
LN+E+G DVFIA NA++MHMDFI+NP+A+GFVT+K ACCGQG +NGIGLCTP S LCPNR
Sbjct: 185 LNQELGADVFIAANAYQMHMDFISNPRAYGFVTSKIACCGQGPYNGIGLCTPASNLCPNR 364
Query: 322 NLYAFWDAFHPSEKASRIIVQQMFIGSNLYMNPMNLSTVLAMDS 365
++YAFWD FHPSE+ASRIIVQQ+ G+ YM+PMNLST++A+DS
Sbjct: 365 DIYAFWDPFHPSERASRIIVQQILRGTTEYMHPMNLSTIMALDS 496
>AV767701
Length = 622
Score = 252 bits (643), Expect = 8e-68
Identities = 120/167 (71%), Positives = 142/167 (84%)
Frame = +3
Query: 27 QPKRAFFVFGDSVADNGNNNFLTTTARADAPPYGIDFPTHEPTGRFSNGLNIPDLTSERL 86
+P RAFFVFGDS+ D+GNNN+L TTARAD+PPYGID+PT PTGRFSNGLNIPDL S++L
Sbjct: 120 KPSRAFFVFGDSLVDSGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDLISQQL 299
Query: 87 GLEPSLPYLSPLLVGEKLLVGANFASAGVGILNDTGFQFLQIIHIGKQLDLFNQYQQKLS 146
G E LPYLSP L G KLL+GANFASAG+GILNDTG QFL II + +QLD F +YQ +L+
Sbjct: 300 GAESVLPYLSPQLRGNKLLLGANFASAGIGILNDTGTQFLNIIRMYRQLDYFEEYQHRLA 479
Query: 147 AQIGAEGAKQLVNKAIVLIMLGGNDFVNNYYLVPFSARSRQFSLPNY 193
+QIG K LV+KA+VLI +GGNDFVNNYYLVP+SARSRQ+SLP+Y
Sbjct: 480 SQIGVTKTKALVDKALVLITVGGNDFVNNYYLVPYSARSRQYSLPDY 620
>TC10837
Length = 667
Score = 244 bits (623), Expect = 2e-65
Identities = 112/150 (74%), Positives = 133/150 (88%)
Frame = +2
Query: 218 VTGTGPMGCAPAELALKSRNGDCDAELMRAASLYNPQLVQMITQLNREIGDDVFIAVNAH 277
VTGTG MGC PAELAL+SRNG+CD EL RAA+LYNPQLV+MI LN+EIG DVF+A NA+
Sbjct: 2 VTGTGSMGCVPAELALRSRNGECDVELQRAAALYNPQLVEMIKGLNKEIGADVFVAANAY 181
Query: 278 KMHMDFITNPKAFGFVTAKDACCGQGRFNGIGLCTPISKLCPNRNLYAFWDAFHPSEKAS 337
+MHMDF++NP+A+GFVT+K ACCGQG +NGIGLCTP+S LC NR+LYAFWDAFHPSEKAS
Sbjct: 182 QMHMDFVSNPQAYGFVTSKIACCGQGPYNGIGLCTPLSNLCHNRDLYAFWDAFHPSEKAS 361
Query: 338 RIIVQQMFIGSNLYMNPMNLSTVLAMDSMV 367
RIIVQQ+ GS YM+PMNLST++A+DS V
Sbjct: 362 RIIVQQILTGSTHYMHPMNLSTIMALDSNV 451
>TC11616 similar to UP|Q9SVU5 (Q9SVU5) Proline-rich APG-like protein,
partial (41%)
Length = 569
Score = 230 bits (586), Expect = 3e-61
Identities = 115/177 (64%), Positives = 137/177 (76%)
Frame = +2
Query: 1 MASSLMLCCSYILMINLFVGFDLAYAQPKRAFFVFGDSVADNGNNNFLTTTARADAPPYG 60
+ S L C +L++ L GF A+ RAFFVFGDS+ DNGNNN+L TTARAD+PPYG
Sbjct: 44 LVSMASLACYIVLVVALASGF--RGAEAARAFFVFGDSLVDNGNNNYLATTARADSPPYG 217
Query: 61 IDFPTHEPTGRFSNGLNIPDLTSERLGLEPSLPYLSPLLVGEKLLVGANFASAGVGILND 120
ID P PTGRFSNG NIPD SE+LG EP+LPYLSP L G+ LLVGANFASAG+GILND
Sbjct: 218 IDTPNGRPTGRFSNGRNIPDFISEQLGAEPTLPYLSPELNGDNLLVGANFASAGIGILND 397
Query: 121 TGFQFLQIIHIGKQLDLFNQYQQKLSAQIGAEGAKQLVNKAIVLIMLGGNDFVNNYY 177
TG QF+ II I +QL+ F++YQQ++SA IG E ++LVN A+VLI LGGNDFVNNYY
Sbjct: 398 TGIQFINIIRIFRQLEYFDEYQQRVSALIGPEETQRLVNGALVLITLGGNDFVNNYY 568
>TC10139 similar to UP|Q9SVU5 (Q9SVU5) Proline-rich APG-like protein,
partial (40%)
Length = 595
Score = 223 bits (567), Expect = 5e-59
Identities = 99/146 (67%), Positives = 121/146 (82%)
Frame = +2
Query: 220 GTGPMGCAPAELALKSRNGDCDAELMRAASLYNPQLVQMITQLNREIGDDVFIAVNAHKM 279
GTGP+GC PAELAL SRNG+C EL RA +L+NPQLVQ+I QLN EIG VFI+ NA M
Sbjct: 2 GTGPLGCVPAELALHSRNGECAVELQRAVNLFNPQLVQLINQLNTEIGSHVFISANAFAM 181
Query: 280 HMDFITNPKAFGFVTAKDACCGQGRFNGIGLCTPISKLCPNRNLYAFWDAFHPSEKASRI 339
H+DF+ +P+A+GFVT+K ACCGQG +NGIGLCTP S LCPNR+L+AFWD FHPSE+A+R+
Sbjct: 182 HLDFVNDPQAYGFVTSKVACCGQGAYNGIGLCTPASNLCPNRDLFAFWDPFHPSERANRL 361
Query: 340 IVQQMFIGSNLYMNPMNLSTVLAMDS 365
IV + GS YMNPMNLST++A+DS
Sbjct: 362 IVDKFMTGSTEYMNPMNLSTIMALDS 439
>TC12983
Length = 515
Score = 194 bits (492), Expect = 3e-50
Identities = 96/136 (70%), Positives = 112/136 (81%)
Frame = +3
Query: 30 RAFFVFGDSVADNGNNNFLTTTARADAPPYGIDFPTHEPTGRFSNGLNIPDLTSERLGLE 89
RAFFV GDS+ DNGNNN+L TTARADA PYGID +H +GRFSNGLN+PDL SE++G E
Sbjct: 105 RAFFVLGDSLVDNGNNNYLATTARADAYPYGIDSASHRASGRFSNGLNMPDLISEKIGSE 284
Query: 90 PSLPYLSPLLVGEKLLVGANFASAGVGILNDTGFQFLQIIHIGKQLDLFNQYQQKLSAQI 149
P+LPYLSP L GEKLL GANFASAG+GILNDTG QF+ II IG QL F QYQQ++SA I
Sbjct: 285 PTLPYLSPELDGEKLLNGANFASAGIGILNDTGVQFINIIRIGAQLGYFRQYQQRVSALI 464
Query: 150 GAEGAKQLVNKAIVLI 165
G + A+ LVN+A+VLI
Sbjct: 465 GEKEAQNLVNQALVLI 512
>TC12378
Length = 464
Score = 173 bits (439), Expect = 4e-44
Identities = 75/114 (65%), Positives = 96/114 (83%)
Frame = +1
Query: 252 NPQLVQMITQLNREIGDDVFIAVNAHKMHMDFITNPKAFGFVTAKDACCGQGRFNGIGLC 311
NPQL+ MI LN++ G +VF+A N +MH DFITNPKA+GF T++ ACCGQG +NGIGLC
Sbjct: 1 NPQLLHMIQALNKKFGREVFVAANTGQMHNDFITNPKAYGFTTSEIACCGQGPYNGIGLC 180
Query: 312 TPISKLCPNRNLYAFWDAFHPSEKASRIIVQQMFIGSNLYMNPMNLSTVLAMDS 365
TP+S LCP+RNLYAFWD FHPSEKA+++IV+ + GS +YMNPMNLST+LA+D+
Sbjct: 181 TPLSNLCPHRNLYAFWDPFHPSEKANKLIVEAIMSGSKMYMNPMNLSTILALDA 342
>TC19700 similar to UP|Q9SVU5 (Q9SVU5) Proline-rich APG-like protein,
partial (25%)
Length = 442
Score = 162 bits (409), Expect = 1e-40
Identities = 81/115 (70%), Positives = 91/115 (78%)
Frame = +1
Query: 8 CCSYILMINLFVGFDLAYAQPKRAFFVFGDSVADNGNNNFLTTTARADAPPYGIDFPTHE 67
C I++IN+ A RAFFVFGDS+ DNGNNN+L TTARAD+ PYGID+PTH
Sbjct: 112 CLVIIMLINI------PKAAEGRAFFVFGDSLVDNGNNNYLITTARADSYPYGIDYPTHR 273
Query: 68 PTGRFSNGLNIPDLTSERLGLEPSLPYLSPLLVGEKLLVGANFASAGVGILNDTG 122
TGRFSNGLNIPDL SER+G EP+LPYLSP L GE LLVGANFASAG+GILNDTG
Sbjct: 274 ATGRFSNGLNIPDLISERIGSEPTLPYLSPQLDGEALLVGANFASAGIGILNDTG 438
>BP041040
Length = 550
Score = 137 bits (346), Expect = 2e-33
Identities = 71/171 (41%), Positives = 101/171 (58%), Gaps = 1/171 (0%)
Frame = +3
Query: 11 YILMINLFVGFDLAYAQPKRAFFVFGDSVADNGNNNFLTTTARADAPPYGIDFPTHEPTG 70
++ +I +F+ + + A VFGDS D+GNNNF+ T A+++ PYG DFP PTG
Sbjct: 24 WLFLIEIFLHISTSSSGKVPAIIVFGDSSVDSGNNNFIPTMAKSNFEPYGRDFPDGNPTG 203
Query: 71 RFSNGLNIPDLTSERLGLEPSLP-YLSPLLVGEKLLVGANFASAGVGILNDTGFQFLQII 129
RFSNG PD SE GL+P++P YL P G FASAG G N T +I
Sbjct: 204 RFSNGRIAPDFISEAFGLKPTIPAYLDPAYSISDFASGVCFASAGTGYDNSTS-NVADVI 380
Query: 130 HIGKQLDLFNQYQQKLSAQIGAEGAKQLVNKAIVLIMLGGNDFVNNYYLVP 180
+ K+++ + Y+QKL A +G E A ++V +A+ L+ +G NDF+ NYY P
Sbjct: 381 PLWKEVEYYKDYRQKLVAYLGDEKANEIVKEALYLVSIGTNDFLENYYTFP 533
>BI420239
Length = 621
Score = 119 bits (297), Expect = 1e-27
Identities = 68/176 (38%), Positives = 101/176 (56%)
Frame = +1
Query: 33 FVFGDSVADNGNNNFLTTTARADAPPYGIDFPTHEPTGRFSNGLNIPDLTSERLGLEPSL 92
F+FGDS++D+GNNN L T A+ D PYGIDFPT PTGR++NG N D +E LGLE +
Sbjct: 94 FIFGDSLSDSGNNNNLETDAKVDYLPYGIDFPTG-PTGRYTNGRNAIDKITELLGLEDFI 270
Query: 93 PYLSPLLVGEKLLVGANFASAGVGILNDTGFQFLQIIHIGKQLDLFNQYQQKLSAQIGAE 152
P + L G +L G N+AS GI ++G I++G Q+ ++SA++G
Sbjct: 271 PPFANLS-GSDILKGVNYASGSAGIRKESGTNLGTNINMGLQIYFHMAIVSQISARLGFH 447
Query: 153 GAKQLVNKAIVLIMLGGNDFVNNYYLVPFSARSRQFSLPNYVTYLISEYKKILQRL 208
AK+ ++K + + +G ND+ NY+L S +++ Y LI+ LQ L
Sbjct: 448 KAKRHLSKCLYYVNIGTNDYEQNYFLPDLFDTSSKYTPEEYAKDLINRLSHYLQIL 615
>AV427493
Length = 217
Score = 117 bits (293), Expect = 3e-27
Identities = 54/71 (76%), Positives = 64/71 (90%)
Frame = +2
Query: 177 YLVPFSARSRQFSLPNYVTYLISEYKKILQRLYDLGARRVLVTGTGPMGCAPAELALKSR 236
+LVPFSARSRQF+LP+YV YLISEY+KIL RLY+LGARRV+VTGTGP+GC PAELA +SR
Sbjct: 5 FLVPFSARSRQFALPDYVVYLISEYRKILARLYELGARRVMVTGTGPLGCVPAELAQRSR 184
Query: 237 NGDCDAELMRA 247
NG+C EL +A
Sbjct: 185 NGECSPELQQA 217
>TC15855
Length = 529
Score = 116 bits (291), Expect = 5e-27
Identities = 52/77 (67%), Positives = 63/77 (81%)
Frame = +2
Query: 289 AFGFVTAKDACCGQGRFNGIGLCTPISKLCPNRNLYAFWDAFHPSEKASRIIVQQMFIGS 348
AFGFVT+K ACCGQG +NG+GLCT S LCP+R++YAFWD FHPSE+A IVQQ+ G+
Sbjct: 2 AFGFVTSKVACCGQGPYNGLGLCTTASNLCPDRDVYAFWDPFHPSERAHSFIVQQIMSGN 181
Query: 349 NLYMNPMNLSTVLAMDS 365
YM PMNLSTVLA+D+
Sbjct: 182 TEYMYPMNLSTVLAIDA 232
>TC10793
Length = 556
Score = 110 bits (275), Expect = 4e-25
Identities = 67/167 (40%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Frame = +1
Query: 5 LMLCCSYILMINLFVGFDLAYAQPKRAFFVFGDSVADNGNNNFLTTTARADAPPYGIDFP 64
L+LC + +L + V A VFGDS D GNNNF+ T AR++ PYG DF
Sbjct: 70 LLLCTTLLLQLLCLV----VAGGKVPAIIVFGDSSVDAGNNNFIETVARSNFQPYGRDFQ 237
Query: 65 THEPTGRFSNGLNIPDLTSERLGLEPSLP-YLSPLLVGEKLLVGANFASAGVGILNDTGF 123
+PTGRFSNG D SE G++P +P YL P G FASA G N T
Sbjct: 238 GGKPTGRFSNGRIATDFISEAFGIKPYVPAYLDPSYNISHFATGVAFASAATGYDNATS- 414
Query: 124 QFLQIIHIGKQLDLFNQYQQKLSAQIGAEGAKQLVNKAIVLIMLGGN 170
L +I + KQL+ + YQ+KLS +G + A + K++ +I LG N
Sbjct: 415 DVLSVIPLWKQLEYYKAYQKKLSTYLGEKKAHDTITKSLHIISLGTN 555
>AV770406
Length = 480
Score = 106 bits (264), Expect = 7e-24
Identities = 43/82 (52%), Positives = 66/82 (80%)
Frame = -1
Query: 282 DFITNPKAFGFVTAKDACCGQGRFNGIGLCTPISKLCPNRNLYAFWDAFHPSEKASRIIV 341
+F+TNP+A+GF T+K ACC QG ++G+G CTP+S +CP+R++YAFWDAFHPS++A I
Sbjct: 477 EFVTNPQAYGFETSKIACCVQGPYHGLGPCTPLSHVCPDRDVYAFWDAFHPSQRALEFIA 298
Query: 342 QQMFIGSNLYMNPMNLSTVLAM 363
+ +F GS+ ++PM+LST+ +
Sbjct: 297 EGVFNGSSDIISPMHLSTITGL 232
>BP034926
Length = 607
Score = 102 bits (255), Expect = 8e-23
Identities = 63/172 (36%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Frame = +2
Query: 5 LMLCCSYILMINLFVGFDLAYAQPKRAFFVFGDSVADNGNNNFLTTTARADAPPYGIDFP 64
+M CS+ + I L A VFGDS D GNNN L T+ +++ PPYG DF
Sbjct: 101 MMPWCSFAVDIQL--ARQWAAKSNVSCILVFGDSSVDPGNNNVLRTSMKSNFPPYGKDFF 274
Query: 65 THEPTGRFSNGLNIPDLTSERLGLEPSLP-YLSPLLVGEKLLVGANFASAGVGILNDTGF 123
PTGRF NG D +E LG LP +L P L E L G +FASA G +D
Sbjct: 275 NSLPTGRFCNGRLATDFIAEALGYRQMLPAFLDPNLKVEDLPYGVSFASAATG-FDDYTA 451
Query: 124 QFLQIIHIGKQLDLFNQYQQKLSAQIGAEGAKQLVNKAIVLIMLGGNDFVNN 175
+ ++ + KQ+ F Y+ L +G E A+ ++ A+ ++ +G NDF+ N
Sbjct: 452 NVVNVLPVSKQIQYFMHYKIHLRKLLGEERAEFIIRNALFIVSMGTNDFLQN 607
>BI420145
Length = 501
Score = 101 bits (252), Expect = 2e-22
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
Frame = +2
Query: 12 ILMINLFVGFDLAYAQPKRAFFVFGDSVADNGNNNFLTTT-ARADAPPYGIDFPTHEPTG 70
+++ + G + K F+FGDS++D+GNN +L+ + A+A P YGID P G
Sbjct: 47 VIIATIIFGIGFEGCECKIVQFIFGDSLSDSGNNKYLSKSLAQASLPWYGIDMGNGLPNG 226
Query: 71 RFSNGLNIPDLTSERLGLEPSLPYLSPLLVGEKLLV-GANFASAGVGILNDTGFQFLQII 129
RFSNG + D+ + +GL +L P L + +L G N+AS G GILN+TG F+Q
Sbjct: 227 RFSNGRTVADIIGDNMGLPRPPAFLDPSLSEDIILENGVNYASGGGGILNETGGYFIQRF 406
Query: 130 HIGKQLDLFNQYQQKLSAQIGAEGAKQ 156
+ KQ++LF Q+ ++++IG E A++
Sbjct: 407 SLYKQIELFQGTQKLITSKIGKEEAEK 487
>TC18753
Length = 562
Score = 99.4 bits (246), Expect = 9e-22
Identities = 61/145 (42%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
Frame = +3
Query: 32 FFVFGDSVADNGNNNFLTTTARADAPPYGIDFPTHEPTGRFSNGLNIPDLTSERLGLEPS 91
FF FGDS+ DNGNNN L++ A+A+ PYGIDFP PTGRFSNG D+ E LG
Sbjct: 132 FFSFGDSLVDNGNNNRLSSLAKANYRPYGIDFP-GGPTGRFSNGKTSVDVIGELLGFGSY 308
Query: 92 LPYLSPLLVGEKLLVGANFASAGVGILNDTGFQFLQIIHIGKQLDLFNQYQQKLSAQIGA 151
+P + G+ +L G N+ASA GI +TG Q I Q+ + + +L +G
Sbjct: 309 IPPYATTR-GQDILRGVNYASAAAGIREETGQQLGGRISFRGQVQNYQRTVSQLINLLGD 485
Query: 152 EG-AKQLVNKAIVLIMLGGNDFVNN 175
E A ++K I I +G ND++NN
Sbjct: 486 ENTAANYLSKCIYSIGIGSNDYLNN 560
>BG662032
Length = 421
Score = 95.1 bits (235), Expect = 2e-20
Identities = 47/136 (34%), Positives = 74/136 (53%), Gaps = 2/136 (1%)
Frame = +1
Query: 199 SEYKKILQRLYDLGARRVLVTGTGPMGCAPAELALKSRNGDCDAELMRAASL-YNPQLVQ 257
S ++ L RLY L AR+ ++ GP+GC P + + N + +L +L YN +L
Sbjct: 13 SHFRAQLTRLYRLDARKFVIGNVGPIGCIPYQKTINQLNENECVDLPNKLALQYNARLKD 192
Query: 258 MITQLNREIGDDVFIAVNAHKMHMDFITNPKAFGFVTAKDACCGQ-GRFNGIGLCTPISK 316
++ +LN + F+ N + + M+ I N +GF T+ ACCG G+F GI C P S
Sbjct: 193 LMAELNDNLPGATFVVANVYDLVMELIKNYDKYGFTTSTKACCGNGGQFAGIVPCGPTSS 372
Query: 317 LCPNRNLYAFWDAFHP 332
+C +R + FWD +HP
Sbjct: 373 ICTDRYKHVFWDPYHP 420
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.324 0.140 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,658,184
Number of Sequences: 28460
Number of extensions: 73177
Number of successful extensions: 450
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of query: 367
length of database: 4,897,600
effective HSP length: 92
effective length of query: 275
effective length of database: 2,279,280
effective search space: 626802000
effective search space used: 626802000
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)
Medicago: description of AC146559.11